Metagenome / Metatranscriptome Family F056325

Basic Information
Family ID	F056325
Family Type	Metagenome / Metatranscriptome
Number of Sequences	137
Average Sequence Length	104 residues
Representative Sequence	MATRKINEDALIKKALKAVNKDLGIAAKTPAAKLKSFNEKLKAAPTPFLYRIKDVWKAFAALMAGFFTIGFIIARLTIPTEAVLQTASVSPDIYDFNTFDSDGDGEWT
Number of Associated Samples	91
Number of Associated Scaffolds	137

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	93.65 %
% of genes near scaffold ends (potentially truncated)	91.97 %
% of genes from short scaffolds (< 2000 bps)	88.32 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.24

Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine (26.277 % of family members)
Environment Ontology (ENVO)	Unclassified (75.182 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (96.350 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 49.26% β-sheet: 0.00% Coil/Unstructured: 50.74%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 137 Family Scaffolds
PF01844	HNH	0.73
PF04542	Sigma70_r2	0.73

COG ID	Name	Functional Category	% Frequency in 137 Family Scaffolds
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.73
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.73
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.73
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.73

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Scaffold	Taxonomy	Length	IMG/M Link
3300001346\|JGI20151J14362_10125733	Not Available	817	Open in IMG/M
3300001352\|JGI20157J14317_10052542	Not Available	1862	Open in IMG/M
3300004279\|Ga0066605_10063321	Not Available	1627	Open in IMG/M
3300004279\|Ga0066605_10136178	Not Available	986	Open in IMG/M
3300005239\|Ga0073579_1110878	Not Available	786	Open in IMG/M
3300007863\|Ga0105744_1169697	Not Available	546	Open in IMG/M
3300009003\|Ga0102813_1250885	Not Available	546	Open in IMG/M
3300009071\|Ga0115566_10308264	Not Available	932	Open in IMG/M
3300009071\|Ga0115566_10649293	Not Available	588	Open in IMG/M
3300009074\|Ga0115549_1151558	Not Available	753	Open in IMG/M
3300009076\|Ga0115550_1122025	Not Available	938	Open in IMG/M
3300009077\|Ga0115552_1226824	Not Available	759	Open in IMG/M
3300009077\|Ga0115552_1226832	Not Available	759	Open in IMG/M
3300009077\|Ga0115552_1322604	Not Available	614	Open in IMG/M
3300009172\|Ga0114995_10077757	Not Available	1868	Open in IMG/M
3300009172\|Ga0114995_10448357	Not Available	706	Open in IMG/M
3300009172\|Ga0114995_10488925	Not Available	673	Open in IMG/M
3300009193\|Ga0115551_1225488	Not Available	835	Open in IMG/M
3300009420\|Ga0114994_10547884	Not Available	760	Open in IMG/M
3300009420\|Ga0114994_10729012	Not Available	646	Open in IMG/M
3300009422\|Ga0114998_10154738	Not Available	1103	Open in IMG/M
3300009436\|Ga0115008_10446452	Not Available	920	Open in IMG/M
3300009437\|Ga0115556_1033521	Not Available	2251	Open in IMG/M
3300009437\|Ga0115556_1157227	Not Available	836	Open in IMG/M
3300009438\|Ga0115559_1166213	Not Available	812	Open in IMG/M
3300009440\|Ga0115561_1318503	Not Available	573	Open in IMG/M
3300009443\|Ga0115557_1045449	Not Available	2008	Open in IMG/M
3300009445\|Ga0115553_1278190	Not Available	650	Open in IMG/M
3300009447\|Ga0115560_1136621	Not Available	981	Open in IMG/M
3300009449\|Ga0115558_1147395	Not Available	997	Open in IMG/M
3300009467\|Ga0115565_10368573	Not Available	650	Open in IMG/M
3300009472\|Ga0115554_1195605	Not Available	822	Open in IMG/M
3300009495\|Ga0115571_1203409	Not Available	809	Open in IMG/M
3300009496\|Ga0115570_10240017	Not Available	803	Open in IMG/M
3300009497\|Ga0115569_10518711	Not Available	501	Open in IMG/M
3300009498\|Ga0115568_10472059	Not Available	537	Open in IMG/M
3300009505\|Ga0115564_10242768	Not Available	921	Open in IMG/M
3300009505\|Ga0115564_10330326	Not Available	757	Open in IMG/M
3300009505\|Ga0115564_10348994	Not Available	731	Open in IMG/M
3300009508\|Ga0115567_10919332	Not Available	519	Open in IMG/M
3300009512\|Ga0115003_10183603	Not Available	1261	Open in IMG/M
3300009512\|Ga0115003_10206328	Not Available	1180	Open in IMG/M
3300009526\|Ga0115004_10364846	Not Available	856	Open in IMG/M
3300009526\|Ga0115004_10438573	Not Available	773	Open in IMG/M
3300009526\|Ga0115004_10718068	Not Available	593	Open in IMG/M
3300017950\|Ga0181607_10071713	Not Available	2264	Open in IMG/M
3300018041\|Ga0181601_10238138	Not Available	1043	Open in IMG/M
3300018415\|Ga0181559_10454670	Not Available	699	Open in IMG/M
3300018417\|Ga0181558_10392863	Not Available	737	Open in IMG/M
3300018420\|Ga0181563_10368384	Not Available	825	Open in IMG/M
3300018420\|Ga0181563_10448311	Not Available	731	Open in IMG/M
3300018876\|Ga0181564_10095985	Not Available	1865	Open in IMG/M
3300018876\|Ga0181564_10139198	Not Available	1467	Open in IMG/M
3300018876\|Ga0181564_10379017	Not Available	774	Open in IMG/M
3300018876\|Ga0181564_10683351	Not Available	541	Open in IMG/M
3300020051\|Ga0181555_1326606	Not Available	524	Open in IMG/M
3300020053\|Ga0181595_10361911	Not Available	574	Open in IMG/M
3300020165\|Ga0206125_10251386	Not Available	673	Open in IMG/M
3300020165\|Ga0206125_10273812	Not Available	638	Open in IMG/M
3300020165\|Ga0206125_10344968	Not Available	550	Open in IMG/M
3300020169\|Ga0206127_1220366	Not Available	675	Open in IMG/M
3300020175\|Ga0206124_10275766	Not Available	646	Open in IMG/M
3300020182\|Ga0206129_10222803	Not Available	815	Open in IMG/M
3300020185\|Ga0206131_10344181	Not Available	646	Open in IMG/M
3300020185\|Ga0206131_10390303	Not Available	585	Open in IMG/M
3300020187\|Ga0206130_10430915	Not Available	519	Open in IMG/M
3300020191\|Ga0181604_10267754	Not Available	792	Open in IMG/M
3300020595\|Ga0206126_10236040	Not Available	841	Open in IMG/M
3300020595\|Ga0206126_10437819	Not Available	571	Open in IMG/M
3300021185\|Ga0206682_10134103	Not Available	1185	Open in IMG/M
3300021347\|Ga0213862_10240378	Not Available	639	Open in IMG/M
3300021365\|Ga0206123_10169436	Not Available	989	Open in IMG/M
3300021365\|Ga0206123_10453398	Not Available	520	Open in IMG/M
3300021371\|Ga0213863_10232863	Not Available	796	Open in IMG/M
3300021371\|Ga0213863_10263914	Not Available	733	Open in IMG/M
3300021389\|Ga0213868_10729104	Not Available	503	Open in IMG/M
3300021959\|Ga0222716_10662624	Not Available	560	Open in IMG/M
3300022907\|Ga0255775_1119352	Not Available	1120	Open in IMG/M
3300022925\|Ga0255773_10408954	Not Available	513	Open in IMG/M
3300022927\|Ga0255769_10163915	Not Available	1025	Open in IMG/M
3300022929\|Ga0255752_10297538	Not Available	686	Open in IMG/M
3300023704\|Ga0228684_1047151	Not Available	668	Open in IMG/M
(restricted) 3300024255\|Ga0233438_10310692	Not Available	601	Open in IMG/M
(restricted) 3300024264\|Ga0233444_10320984	Not Available	662	Open in IMG/M
3300024313\|Ga0228624_1084328	Not Available	581	Open in IMG/M
3300025483\|Ga0209557_1083118	Not Available	700	Open in IMG/M
3300025637\|Ga0209197_1139901	Not Available	665	Open in IMG/M
3300025654\|Ga0209196_1209861	Not Available	501	Open in IMG/M
3300025696\|Ga0209532_1109131	Not Available	931	Open in IMG/M
3300025704\|Ga0209602_1224762	Not Available	539	Open in IMG/M
3300025705\|Ga0209374_1063955	Not Available	1244	Open in IMG/M
3300025712\|Ga0209305_1106546	Not Available	891	Open in IMG/M
3300025712\|Ga0209305_1119106	Not Available	828	Open in IMG/M
3300025809\|Ga0209199_1161816	Not Available	822	Open in IMG/M
3300025809\|Ga0209199_1237325	Not Available	606	Open in IMG/M
3300025860\|Ga0209119_1260240	Not Available	636	Open in IMG/M
3300025870\|Ga0209666_1308576	Not Available	622	Open in IMG/M
3300025874\|Ga0209533_1294324	Not Available	629	Open in IMG/M
3300025874\|Ga0209533_1356825	Not Available	541	Open in IMG/M
3300025880\|Ga0209534_10316969	Not Available	710	Open in IMG/M
3300025880\|Ga0209534_10407147	Not Available	587	Open in IMG/M
3300025886\|Ga0209632_10173896	Not Available	1163	Open in IMG/M
3300025886\|Ga0209632_10445589	Not Available	605	Open in IMG/M
3300025886\|Ga0209632_10462720	Not Available	588	Open in IMG/M
3300025890\|Ga0209631_10163926	Not Available	1182	Open in IMG/M
3300025890\|Ga0209631_10459547	Not Available	576	Open in IMG/M
3300025890\|Ga0209631_10509957	Not Available	532	Open in IMG/M
3300025892\|Ga0209630_10310552	Not Available	713	Open in IMG/M
3300025892\|Ga0209630_10312389	Not Available	710	Open in IMG/M
3300025894\|Ga0209335_10167861	Not Available	1043	Open in IMG/M
3300025894\|Ga0209335_10180346	Not Available	991	Open in IMG/M
3300025897\|Ga0209425_10304070	Not Available	798	Open in IMG/M
3300025897\|Ga0209425_10345055	Not Available	729	Open in IMG/M
3300025897\|Ga0209425_10427309	Not Available	628	Open in IMG/M
3300025897\|Ga0209425_10483382	Not Available	575	Open in IMG/M
3300027687\|Ga0209710_1255957	Not Available	563	Open in IMG/M
3300027780\|Ga0209502_10038058	Not Available	2736	Open in IMG/M
3300027780\|Ga0209502_10170109	Not Available	1029	Open in IMG/M
3300027780\|Ga0209502_10228071	Not Available	840	Open in IMG/M
3300027780\|Ga0209502_10453094	Not Available	513	Open in IMG/M
3300027788\|Ga0209711_10462156	Not Available	506	Open in IMG/M
3300028008\|Ga0228674_1235037	Not Available	576	Open in IMG/M
3300028414\|Ga0228627_1121125	Not Available	586	Open in IMG/M
3300031519\|Ga0307488_10104471	Not Available	2059	Open in IMG/M
3300031597\|Ga0302116_1106139	Not Available	922	Open in IMG/M
3300031621\|Ga0302114_10178890	Not Available	908	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Pelagic	Environmental → Aquatic → Marine → Pelagic	36.50%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	19.71%
Oceanic	Environmental → Aquatic → Marine → Oceanic	15.33%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	15.33%
Coastal	Environmental → Aquatic → Marine → Coastal	8.76%
Unclassified	Environmental → Aquatic → Marine → Unclassified	2.92%
Inlet	Environmental → Aquatic → Marine → Inlet	1.46%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	36.50%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	19.71%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	15.33%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	12.41%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	8.76%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	2.92%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	2.19%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	1.46%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.73%

Habitat	Taxonomy	Distribution
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	26.28%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	19.71%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	14.60%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	12.41%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	10.22%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	7.30%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	2.19%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	1.46%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	1.46%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	0.73%
Sackhole Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine	0.73%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	0.73%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	0.73%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.73%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	0.73%

Visualization

Powered by ApexCharts

Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001346	Pelagic Microbial community sample from North Sea - COGITO 998_met_01	Environmental	Open in IMG/M
3300001352	Pelagic Microbial community sample from North Sea - COGITO 998_met_07	Environmental	Open in IMG/M
3300004097	Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - OSD3 (Helgoland) metaG	Environmental	Open in IMG/M
3300004279	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI075_LV_DNA_10m	Environmental	Open in IMG/M
3300005239	Environmental Genome Shotgun Sequencing: Ocean Microbial Populations from the Gulf of Maine	Environmental	Open in IMG/M
3300007863	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1459B_0.2um	Environmental	Open in IMG/M
3300009003	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.725	Environmental	Open in IMG/M
3300009071	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405	Environmental	Open in IMG/M
3300009074	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100430	Environmental	Open in IMG/M
3300009076	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100511	Environmental	Open in IMG/M
3300009077	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110328	Environmental	Open in IMG/M
3300009172	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154	Environmental	Open in IMG/M
3300009193	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110321	Environmental	Open in IMG/M
3300009420	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152	Environmental	Open in IMG/M
3300009422	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_138	Environmental	Open in IMG/M
3300009436	Marine eukaryotic phytoplankton communities from Arctic Ocean - Fram Strait ARC3M Metagenome	Environmental	Open in IMG/M
3300009437	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110414	Environmental	Open in IMG/M
3300009438	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110506	Environmental	Open in IMG/M
3300009440	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110512	Environmental	Open in IMG/M
3300009443	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110421	Environmental	Open in IMG/M
3300009445	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110331	Environmental	Open in IMG/M
3300009447	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110509	Environmental	Open in IMG/M
3300009449	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110426	Environmental	Open in IMG/M
3300009467	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110530	Environmental	Open in IMG/M
3300009472	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110404	Environmental	Open in IMG/M
3300009495	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120531	Environmental	Open in IMG/M
3300009496	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120524	Environmental	Open in IMG/M
3300009497	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120503	Environmental	Open in IMG/M
3300009498	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120426	Environmental	Open in IMG/M
3300009505	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110523	Environmental	Open in IMG/M
3300009507	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607	Environmental	Open in IMG/M
3300009508	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120412	Environmental	Open in IMG/M
3300009512	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88	Environmental	Open in IMG/M
3300009526	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_90	Environmental	Open in IMG/M
3300017950	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG (megahit assembly)	Environmental	Open in IMG/M
3300018041	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041407BS metaG (megahit assembly)	Environmental	Open in IMG/M
3300018415	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011508AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018417	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011507BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018420	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011512CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018876	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011513CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300020051	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011504AT metaG (spades assembly)	Environmental	Open in IMG/M
3300020053	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041401AS metaG (spades assembly)	Environmental	Open in IMG/M
3300020165	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160331_1	Environmental	Open in IMG/M
3300020169	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160419_1	Environmental	Open in IMG/M
3300020175	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160321_2	Environmental	Open in IMG/M
3300020182	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160502_2	Environmental	Open in IMG/M
3300020185	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160517_1	Environmental	Open in IMG/M
3300020187	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160512_1	Environmental	Open in IMG/M
3300020191	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041410US metaG (spades assembly)	Environmental	Open in IMG/M
3300020595	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160412_1	Environmental	Open in IMG/M
3300021185	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 40m 12015	Environmental	Open in IMG/M
3300021347	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO266	Environmental	Open in IMG/M
3300021365	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160316_1	Environmental	Open in IMG/M
3300021371	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO497	Environmental	Open in IMG/M
3300021389	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO127	Environmental	Open in IMG/M
3300021959	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13D	Environmental	Open in IMG/M
3300022907	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011511BT metaG	Environmental	Open in IMG/M
3300022925	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG	Environmental	Open in IMG/M
3300022927	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG	Environmental	Open in IMG/M
3300022929	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011512CT metaG	Environmental	Open in IMG/M
3300023704	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 35R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024255 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_123_September2016_10_MG	Environmental	Open in IMG/M
3300024264 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_124_October2016_10_MG	Environmental	Open in IMG/M
3300024313	Seawater microbial communities from Monterey Bay, California, United States - 29D	Environmental	Open in IMG/M
3300025483	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - Saanich Inlet SI074_LV_120m_DNA (SPAdes)	Environmental	Open in IMG/M
3300025637	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110512 (SPAdes)	Environmental	Open in IMG/M
3300025654	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110509 (SPAdes)	Environmental	Open in IMG/M
3300025696	Pelagic Microbial community sample from North Sea - COGITO 998_met_02 (SPAdes)	Environmental	Open in IMG/M
3300025704	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120524 (SPAdes)	Environmental	Open in IMG/M
3300025705	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI075_LV_DNA_10m (SPAdes)	Environmental	Open in IMG/M
3300025712	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110321 (SPAdes)	Environmental	Open in IMG/M
3300025809	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110523 (SPAdes)	Environmental	Open in IMG/M
3300025860	Pelagic Microbial community sample from North Sea - COGITO 998_met_03 (SPAdes)	Environmental	Open in IMG/M
3300025870	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_125m_DNA (SPAdes)	Environmental	Open in IMG/M
3300025874	Pelagic Microbial community sample from North Sea - COGITO 998_met_04 (SPAdes)	Environmental	Open in IMG/M
3300025880	Pelagic Microbial community sample from North Sea - COGITO 998_met_07 (SPAdes)	Environmental	Open in IMG/M
3300025886	Pelagic Microbial community sample from North Sea - COGITO 998_met_10 (SPAdes)	Environmental	Open in IMG/M
3300025890	Pelagic Microbial community sample from North Sea - COGITO 998_met_08 (SPAdes)	Environmental	Open in IMG/M
3300025892	Pelagic Microbial community sample from North Sea - COGITO 998_met_01 (SPAdes)	Environmental	Open in IMG/M
3300025894	Pelagic Microbial community sample from North Sea - COGITO 998_met_09 (SPAdes)	Environmental	Open in IMG/M
3300025897	Pelagic Microbial community sample from North Sea - COGITO 998_met_05 (SPAdes)	Environmental	Open in IMG/M
3300026500	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 54R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300027687	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_138 (SPAdes)	Environmental	Open in IMG/M
3300027780	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_90 (SPAdes)	Environmental	Open in IMG/M
3300027788	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88 (SPAdes)	Environmental	Open in IMG/M
3300028008	Seawater microbial communities from Monterey Bay, California, United States - 1D_r	Environmental	Open in IMG/M
3300028233	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - MB_1026D (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300028414	Seawater microbial communities from Monterey Bay, California, United States - 33D	Environmental	Open in IMG/M
3300031519	Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2	Environmental	Open in IMG/M
3300031597	Marine microbial communities from Western Arctic Ocean, Canada - AG5_SCM	Environmental	Open in IMG/M
3300031621	Marine microbial communities from Western Arctic Ocean, Canada - AG5_Surface	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI20151J14362_101257332	3300001346	Pelagic Marine	VVTKKINEDALILKAAKAVNKELGVSTKTPAAKLKSFNEKVKAAPTPFLYRIKDVWKAFAALMAGFFTIGFIIARLTIPTEAVLQTAAVSPDTYDFNTFDGDGDGEWTLAEAQ
JGI20157J14317_100525421	3300001352	Pelagic Marine	MATRKINXDALXKXVFKKVNKDLGVDAKTPPSQMKSFNEKLKAAPIPFLYRIKNVWKAFAALMAGFFTIGFIIARLTIPSETVMLTASVSPDIYDFNTFDSDGDGEWTLAEAQQAKLALAIQQFEY
Ga0055584_1009553662	3300004097	Pelagic Marine	MLREGLIMASRKINQDALIKKVFKKVDKDMSISNKTRAAQIKSFNEKVKAAPPPFLYRIKDVWKAFTALMAGFFTIGFIVARVTIPTE
Ga0066605_100633214	3300004279	Marine	MATRKINEDVLIKKVFKKVNKDLGVDAKTPPSQMKSFNEKLKAAPTPFLYRIKDVWKAFAALMAGFFTIGFIIARLTIPSETVMMTAS
Ga0066605_101361781	3300004279	Marine	MATKKINEDALILKATKAVNKELGIADKTPAVRMKSFNEKLKAAPTPFLYRIKDVWKAFAALMAGFFTIGFIIARITIPTEAVLQTAAVSPDIYDFNTFDSDGDGE
Ga0073579_11108782	3300005239	Marine	MASRKINQDALIKKVFKKVDKDMSISNKTRAAQIKSFNEKVKAAPTPFLYRIKDVWKAFAALMAGFFTIGFIIARLTIPSETVMLTASVSPDIYDFNTFDSDGDGEWTLADAQQAKEALAIQQFEYAD
Ga0105744_11696971	3300007863	Estuary Water	MVAKKINEDALILKATKAVNKELGIADKTPAARMKSFNEKLNTAPTPFLYRIKDVWKAFAALMAGFFTIGFIIARLTIPTEAVLQTVAVSPDIYDFNTF
Ga0102813_12508851	3300009003	Estuarine	MATRKINEDALIKKVFKKVNKDLGVDAKTPPSQMKSFNEKLKAAPTPFLYRIKDVWKAFAALMAGFFTIGFIIARLTIPSETVMLTASVSPDIYDFNTFDSDGDGEWTLAEAQQAKLALAIQQFEYAD
Ga0115566_103082641	3300009071	Pelagic Marine	MATRKINQDALMKKALIAVNKDLGIAAKTPAAQMKSFNKKLNAAPIPLIDRLKDVWKAFAALMAGFFTIGFIIARLTIPTEAVLQTAAISPDIYDFNTFDSDGDGEWTLAETQVAKEALAIQQFEY
Ga0115566_106492931	3300009071	Pelagic Marine	MAAKKINEDALIIKAAKAVNKELGVSSKTPAAKMKSFNEKVKAAPTPFLYRIKDVWKAFAALMAGFFTIGFIIARITIPTEAVHQTAAISPDTYDFNTFDSDGD
Ga0115549_11515582	3300009074	Pelagic Marine	MATRKINEDGLIKKVFKKVNKDLGVDAKTPPSQMKSFNEKLKTAPTPFLYQIKDVWKAFAALMAGFFTIGFIIARLTIPTEAVL
Ga0115550_11220252	3300009076	Pelagic Marine	MATRKINEDALIKKVFKKVNKDLGVDAKTPPAQMKSFNEKLKAAPTPFLYRIKDVWKAFAALMAGFFTIGFIIARLTIPSETVMLTAAVSPD
Ga0115552_12268242	3300009077	Pelagic Marine	MATRKINEDALIKKVFKKVNKDLGVDAKTPPSQMKSFNEKLKAAPIPFLYRIKNVWKAFAALMAGFFTIGFIIARLTIPTEAVLQKAAVSPDTYDFNTFDGDGDGEWTLAEA
Ga0115552_12268321	3300009077	Pelagic Marine	MAAKKINDDALILKAAKAVNKELGVNSKTPAARMKSFNEKVKAIPTPFLYRIKDVWKAFTALMAGVFAIGFIIARLTIPTEAVLQTAAISPDTYDFNTFD
Ga0115552_12479012	3300009077	Pelagic Marine	MANRKINQDALIKKVFKKVNKDISISNKNRAAQIKSFNEKVKAAPTPFLYRIKEAWKAFAALMAGFFTIGFIIARLTIP
Ga0115552_13226041	3300009077	Pelagic Marine	MVTRKINVDELIKKGAKEVSKSIEVSDKKTNAQIKSFDEKVKAASTPFLYRIKDVWKAFAALMAGFFTIGFIIARLTIPSETVMLTASVSPDIYDFNTFDSDGDGEWTLAEAQQAKLALAIQQFEYADKNQ
Ga0114995_100777571	3300009172	Marine	MATRKINQDALIKKVFKKVNKDLGVAAKTPAAKLKSFNEKLKAAPTPFLYRIKDVWKAFAALMAGFFTIGFIIARLTIPTEAVLQTASVSPDIYDFNTFDSDGDGEWTLAE
Ga0114995_104483571	3300009172	Marine	MVTKKINEDALIIKAAKAVNKKLGVTIKTPAAKMKSFNEKVKATPTPFLYRIKDVWKAFAALMAGFFTIGFIIARLTIPTEAVLQTAAVSPDIYDFNTFDSDGDGELTLAE
Ga0114995_104889252	3300009172	Marine	MATRKINEDALIKKALKAVNKDLGIAAKTPAAKLKSFNEKVKSAPTPFLYLIKDVWKAFAALMAGFFTIGFIIARLTIPTEAVLQTASVSPDIYDFNTFD
Ga0115551_12254881	3300009193	Pelagic Marine	MATKKINEDALILKAAKAVNKELGIADKTPAAKMKSFNEKIKAAPTPFLYRIKDVWKAFAALMAGFFTIGFIIARITIPTEAVLQTAAV
Ga0114994_105478841	3300009420	Marine	MATRKINEDALIKKALKAVNKDLGIAAKTPAAKLKSFNEKLKAAPTPFLYRIKDVWKAFAALMAGFFTIGFIIARLTIPTEAVLQTASVSPDIYDFNTFDSDGDGEWT
Ga0114994_107290122	3300009420	Marine	MATRKINEDALIKQVFKKVNKDLGIAAKTPTTQMKSFNEKLKAIPTPFLYRIKDVWKAFAALMAGFFTIGFIIARLTIPTEAVLQTASVSPDIYDFNTFDSDGDGKWTLAEAQ
Ga0114998_101547381	3300009422	Marine	MATRKINVDELIKKGAKEVSKSVEVSDKKTNAQIKSFDEKVKAAPTPFLYRIKDVWKAFAALMAGFFTIGFIIARLTIPSETVMLTASVSPDIYDFNTFDSDGDGEWTLAEAQQAKEALAIQQFEYADKNQDA
Ga0115008_104464521	3300009436	Marine	MATQKLNVDALIKKATKEVSKSIEVSDKKTNAQIKSFEEKVEVASTPFLYRIKDVWKAFTALMAGFFTIGFIVARLTIPTETVIQTASISPDAHYFNAADTNGDGQLSVAEVESGHTTWGNVKFILPHLDDFDM
Ga0115556_10335216	3300009437	Pelagic Marine	MATRKINEDALIKQVFKKVNKDLGIAAKTPPAQMKSFNEKLKAAPTPFLYRIKDVWKAFAALMAGFFTIGFIIARLTIPSETVLMTASVSPDIYDFNTFDSDGDGEWT
Ga0115556_11572272	3300009437	Pelagic Marine	MSTRKINVDELIKKGAKEVSKSIEVSDKKTNAQIKSFDEKINAAPTPFLYRIKDVWKAFAALMAGVFGIGFIIARLTIP
Ga0115559_11662132	3300009438	Pelagic Marine	MATKKINEDALILKATKAVNKELGIADKTPAAKMKSFNEKLKAAPTPFLYRIKDVWKAFAALMAGFFTIGFIIARITIPTEAVLQTAAVSPDIYDFNTFDSDGD
Ga0115561_13185032	3300009440	Pelagic Marine	MFREGEIMATRKINVDALIKKTAKEVSKSIEVSDKKTNEQIKSFNEKVKVASTPFLYRIKDVWKAFAALMAGFFTIGFIIARLTIPSETVMLTASVSPDI
Ga0115557_10454495	3300009443	Pelagic Marine	MATRKINEDALIKEVFKKVNKDLGIAAKTPPSQMKSFNEKLKATPTPFLYRIKDVWKAFAALMAGFFTIGFIIARLTI
Ga0115553_12781902	3300009445	Pelagic Marine	MATRKINVDELIKKTAKEVSKSIEVSDKKTNAQIKSFDEKVKAASTPFLYRIKDVWKAFAALMAGFFTIGFIIARLTIPSETVMLTASVSPDIYDFNTFDSDGDGEWTLA
Ga0115560_11366212	3300009447	Pelagic Marine	MATRKINEDALIKQVFKKVNKDLGIAAKTPAVQMKSFNEKLKATPTPFLYRIKDVWKAFAALMAGFFTIGFIIARLTIPSETVMLTASVSPDIYDFNAFDTNGDGQITLAEVESRKQAVATVRFVS
Ga0115558_11473952	3300009449	Pelagic Marine	MVTRKINVDELIKKGAKEVSKSIEVSDKKTNAQIKSFEEKVKVASTPFLYRIKDVWKAFAALMAGFFTIGFIIARITIPTEAVLQTAAVSPDIYDFN
Ga0115565_103685731	3300009467	Pelagic Marine	MATRKINEDALIKKVFKKVNKDLGVDAKTPPSQMKSFNEKLKAAPTPFLYRIKDVWKAFAALMAGFFTIGFIIARLTIPSQTVMMTASVSPDIYDFNTFDSDGD
Ga0115554_11956052	3300009472	Pelagic Marine	MATRKINVDELIKKGAKEVSKSVEVSDKKTNAQIKSFEEKVKVASTPFLYRIKDVWKAFAALMAGFFTIGFIIARLTIPSETVMLTASVSPDIYDFNTFDSDGDGEWTLAEAQQAKLAL
Ga0115571_12034092	3300009495	Pelagic Marine	MATRKINVDELIKKTAKEVSKSIEVSDKKTNAQIKSFDEKVKAASTPFLYRIKDVWKAFAALMAGFFTIGFIVARVTLPTDVALKTAYVS
Ga0115570_102400171	3300009496	Pelagic Marine	MATRKINEDALIKKVFKKVNKDLGVDAKTPPSQMKSFNEKLKATPTPFLYRIKDVWKAFAALMAGFFTIGFIIARLTIPSETVMLTASVSPDIYDFNTVDSDGDGEWTLSETQVAKEAL
Ga0115570_105107851	3300009496	Pelagic Marine	MATRKINVDALIKKTAKEVSKSIEVSDKKTNEQIKSFNEKVKAASTPFLYRIKDVWKAFAALMAGFFTIGFII
Ga0115569_105187112	3300009497	Pelagic Marine	MATRKINVDELIKKGAKEVSKSIEVSDKKTNAQIKSFEEKVKVASTPFLYRIKDVWKAFAALMAGFFTIGFIIARLTIPSETVMLTAAVSPDIYDFNTFDSDGDGEWTL
Ga0115568_104720592	3300009498	Pelagic Marine	MATRKINVDALIKKTAKEVSKSIEVSDKKTNAQIKSFEEKVKVASIPFLYRIKDVWKAFAALMAGFFTIGFIIARITIPTEAVIKTAAVSPDIYDFNTFDSNGDGELTLA
Ga0115564_102427682	3300009505	Pelagic Marine	MATRKINEDALIKKVFKKVNKDLGVDAKTPPSQMKSFNEKLKAAPIPFLYRIKNVWKAFAALMAGFFTIGFIIARLTIPSETVMLTASVSPDIYDFNTFDSDGDGEWTL
Ga0115564_103303262	3300009505	Pelagic Marine	MATRKLNVDALINKATKEVSKSIEVSDKKTNAQIKSFDEKVKAASTPFLYRIKDVWKTFAALMAGFFTIGFII
Ga0115564_103489942	3300009505	Pelagic Marine	MATRKINEDALIKKVFKKVNKDLGVAAKTPPAQMKSFNDKLKAAPTPFLYRIKDVWKAFTALMAGFFTIGFIVARLTIPTETVIQTASISPDAHYFNAADTNGDGQLSVAEVESGH
Ga0115572_105479212	3300009507	Pelagic Marine	MATRKINEDALIKKVFKKVNKDLGVDAKTPPSQMKSFNEKLKAAPTPFLYRIKDVWKAFAALMAGFFTIGFIIARLT
Ga0115567_109193321	3300009508	Pelagic Marine	MATRKINVDALIKKTAKEVSKSIEVSDKKTNEQIKSFNEKVKVAPTPFLYRIKDVWKAFTALMAGFFTIGFIVARVTIPTATETVVQTASISPDAHYFNAADTNGDGQLSVAEVESGHTTWGN
Ga0115003_101836031	3300009512	Marine	MATRKINEDALIKQVFKKVNKDLGIAAKTPTTQMKSFNEKLKAIPTPFLYRIKDVWKAFAALMAGFFTIGFIIARLTIPTEAVLQTASVSPDIYDFNTFDS
Ga0115003_102063281	3300009512	Marine	MATRKINVDALIKKATKEVSKSIEVSDKKTNAQIKSFDEKVKAAPTPFLYRIKDVWKAFAALMAGFFTIGFIIARLTIPTEAVLQTAAVSPDIYDFNTFDSDGDGEWTLAETQVAKEALAIQQFEYA
Ga0115004_103648462	3300009526	Marine	MATRKINQDALIKKVFKKVNKDLGVAAKTPAAKLKSFNEKVKSAPTPFLYRIKDVWKAFAALMAGFFTIGFIIARLTIPTEAVLQTASVSPDIYDFNTFDSDGDGEW
Ga0115004_104385732	3300009526	Marine	MATRKINDDVLIKKALKAINKDLGVSDKSRAARIKSFSESLKTDPTPFLYRIKDVWKAFAALMAGFFTIGFIIARLTIPTETVMLTASVSPDIYDFNTFDSDGNGEWTLAEA
Ga0115004_107180681	3300009526	Marine	MVTKKINEDALIIKAAKAVNKKLGVTIKTPAAKMKSFNEKVKATPTPFLYRIKDVWKAFAALMAGFFTIGFIIARLTIPTEAVLQT
Ga0181607_100717131	3300017950	Salt Marsh	MVAKKINEDALILKAAKAVNKELGIADKTPAAKMKSFNEKVKAAPTPFLYRIKDVWKAFAALMAGFFTIGFIIARITIPTEAVLQTAAVSPDTYDFNT
Ga0181601_102381382	3300018041	Salt Marsh	MVAKKINEDALILKAAKAVNKELGIADKTPAAKMKSFNEKVKAAPTPFLYRIKDVWKAFAALMAGFFTIGFIIARITIPTEAVLQTAAVSPDTYDFNTFDGDGDGEWTLAEAQTAKQALAIRQFEYAD
Ga0181559_104546702	3300018415	Salt Marsh	MFREGEIMATRKINEDALIKKVFKKVNKDLGISAKTPSTQMKSFNEKLKATPTPFLYRIKDVWKAFAALMAGFFTIGFIIARLTIPSQSVIQTASVSPDIYDFNTFDSDGDGEWTLAETQ
Ga0181558_103928631	3300018417	Salt Marsh	MFREGEIMATRKINVDALIKKTAKEVSKSIEVPDKKINAQIKSFEEKLKTTPTPFLYRIKDVWKAFAALMAGFF
Ga0181563_103683842	3300018420	Salt Marsh	MATRKINEDALIKKVFKKVNKDLGVAAKTPAAQMKSFNDKLKKTPTPFLYRIKDVWKAFAALMAGFFTIGFIMARLTIPSQSVIQTASVSPDIYDFNTFDSDGDGEWTLAETQVAKEALAIRQFEYVDK
Ga0181563_104483111	3300018420	Salt Marsh	MVAKKINEDALILKAAKAVNKELGIADKTPAAKMKSFNEKVKAAPTPFLYRIKDVWKAFAALMAGFFTIGFIIARITIPTEAVLQTAAVSPDTYDFNTFDGDGDGEWT
Ga0181564_100959854	3300018876	Salt Marsh	MATRKINIDDLIKKGAKEVSKSVELSDKKTNAQIKSFEEKVKTASTPFLYRIKDVWKAFAALMAGFFTIGFIIARLTIPSETVMLTASVSPDIYDFNTFDSDGDGEWTLAEAQQAKLALAIQ
Ga0181564_101391981	3300018876	Salt Marsh	MFREGEIMATRKINVDELIKKGAKEVSKSVEVSDKKTNAQIKSFEEKVKAASTPFLYRIKDVWKAFAALMAGFFTIGFIIARLTIPSETVMLTAAVSPDIYDFNTFDSDGDGEWTLAETQVAKE
Ga0181564_103790171	3300018876	Salt Marsh	MATRKINEDALIKKVFKKVNKDLGISAKTPSAQMKSFNEKLKATPTPFLYRIKDVWKAFAALMAGFFTIGFIMARLTIPSQSVIQTASVSPDIYDFNTF
Ga0181564_106833511	3300018876	Salt Marsh	MATRKINEDDLIKKVFKKVNKDLGVAAKTPAAQMKSFNEKLKSTPTPFLYRIKDVWKAFAALMAGFFTIGFIIARLTIPSETVMMTASVSPDIYDFNTFDSDGDGEWTLAEAQ
Ga0181555_13266061	3300020051	Salt Marsh	MANRKINQDALIKKVFKKVNKDISISNKNRAAQIKSFNEKVKAAPTPFLYRIKEAWKAFAALMAGFFTIGFIIARLTIPSDAVIQTASISPDIYDFNTFDSDGDGEWTLAEAQTA
Ga0181595_103619111	3300020053	Salt Marsh	MATRKINIDDLIKKGAKEVSKSVELSDKKTNAQIKSFEEKVKTASTPFLYRIKDVWKAFAALMAGFFTIGFIIARLTIPSETVMLTASVSPDIYDFNTFDSDGDGEWT
Ga0206125_102513861	3300020165	Seawater	MASKKINQDVLINKVFKKVKKDLSISNKTRAARIKSFNEKLKAAPTPFLYRIKEVWKAFVALMAGFFTVGFIIARLTIPTEAVLQTAAVSPDTYDFNAFDSDGDGEWTLAEAQQAKLALAIQQFEYADVNKDA
Ga0206125_102738121	3300020165	Seawater	MVTRKINVDELIKKGAKEVSKSIEVSDKKTNAQIKSFDEKVKAASTPFLYRIKDVWKAFAALMAGFFTIGFIIARLTIPSETVMLTAAV
Ga0206125_103449682	3300020165	Seawater	MATRKINEDALIKKVFKKVNKDLGVDAKTPPSQMKSFNEKLKAAPIPFLYRIKNVWKAFAALMAGFFTIGFIIARLTIPSETVMMTASVSPDIYDFN
Ga0206127_12203662	3300020169	Seawater	MASKKINQDVLINKVFKKVKKDLSISNKTRAARIKSFNEKLKAAPTPFLYRIKEVWKAFVALMAGFFTVGFIIARLTIPTEAVLQT
Ga0206124_102757662	3300020175	Seawater	MATRKINQDALMKKALIAVNKDLGIAAKTPVAQMKSFNKKLNAAPIPLLDRIKDVWKAFGALMAGFFTIGFIIARLTIPSETVMLTAAVSPDK
Ga0206124_102993901	3300020175	Seawater	MATRKINEDALIKKVFKKVNKDLGVDAKTPPSQMKSFNEKLKAAPTPFLYRIKDVWKAFTALMAGFFTIGFIVARVTIPTETAIQ
Ga0206129_102228032	3300020182	Seawater	MATRKINVDALIKKTAKEVSKSIKVSDKKTNEQIKSFNEKVKVAPTPFLYRIKDVWKAFAALMAGFFTIGFIIARLTIPSETVMLTAAVSPDIYDFNTFDSDGDGEWTLAET
Ga0206131_103441811	3300020185	Seawater	MATRKINQDALMKKALIAVNNDLGIAAKTPVAQMKSFNKKLNAAPIPLLDRIKDVWKAFGALMAGFFTIGFIIARLTIPSETVMLTAAVSPDI
Ga0206131_103903031	3300020185	Seawater	MATKKINEDALILKATKAVNKELGIADKTPAAKMKSFNEKLKTAPTPFLYRIKDVWKAFAALMAGFFTIGFIIARITIPTEAVLQTAAVSPDIYDFNTFDSDGDGEWTLAETQVAKEALAIQQFEYADKNQ
Ga0206130_104309152	3300020187	Seawater	MATRKINVDALIKKTAKEVSKSIKVSDKKTNEQIKSFNEKVKVAPTPFLYRIKDVWKAFTALMAGFFTIGFIVARLTIPSETVMLTAAVSPDIYDFNTFDSDGDGEW
Ga0181604_102677542	3300020191	Salt Marsh	MFREGEIMATRKINVDELIKKGAKEVSKSVEVSDKKTNAQIKSFEEKVKAASTPFLYRIKDVWKAFAALMAGFFTIGFIIARLTI
Ga0206126_102360402	3300020595	Seawater	MATKKINEDALIIKAAKAVNKELGVSSKTPAAKMESFNEKVKAAPTPFLYRIKDVWKAFAALMAGFFTIGFIIARLTIPTEAVLQTAAVSPDIYDFNTFDSDGDGELT
Ga0206126_104378192	3300020595	Seawater	MATRKINEDELIKQVFKKVNKDLGIAAKTPPAQMKSFNEKLKAAPTPFLYRIKDVWKAFAALMAGFFTIGFIIARLTIPTEAVLQTA
Ga0206682_101341033	3300021185	Seawater	MATRKINVDELIKKTAKEVGKSIAVSDKKTNAQIKSFDEKVKAASTPFLYRIKDVWKAFAALMAGFFTIGFIIARLTIPSETVMLTAAVS
Ga0213862_102403782	3300021347	Seawater	MATRKINVDALIKKTAKEVSKSIKVSDKKTNEQIKSFNEKVKVAPTPFLYRIKDVWKAFTALMAGFFTIGFIVARLTIPTETVIQTASISPDAHYFNAADTNGDGQLSVAEVESGHTT
Ga0206123_101694361	3300021365	Seawater	MASKKIDQDALIKKVFKKVNKDMSISNKTRAAQIKSFNEKLKAVPTPFLYRIKGVWKAFAALMAGFFTIGFIIARLTIPSETVMLTASVSPDIYDFNTFDSD
Ga0206123_104533982	3300021365	Seawater	MATRKINEDALIKKVFKKVNKDLGVDAKTPPSQMKSFNEKLKAAPIPFLYRIKDVWKAFAALMAGFFTIGFIIARLTIPSESVMLTASVSPDIYDFNTFDSDGDGEWTLAEAQAAKLA
Ga0213863_102328632	3300021371	Seawater	MATKKINEDTLILKAAKAVNKDLGIAAKTPATKMKSFNEKVKAAPTPFIYRIKDVWKAFAALMAGFFTIGFILARVTLPTDVALKAAYVSPDLYEFNTFDA
Ga0213863_102639142	3300021371	Seawater	MATKKINEDALILKAAKAVNKELGIADKTPTAKMKSFNEKINAASTPFLYRIKDVWKAFVALMAGVFAIGFIIARLTIPTEAVLQTAAISPDTYDFNTFDSDGDGEW
Ga0213868_107291041	3300021389	Seawater	MATRKINEDALIKKVFKKVNKDLGVDAKTPPSQMKSFNEKLKAAPTPFLYRIKDVWKAFTALMAGFFTIGFIVARVTIPTETVVQTASISPDAHYFNAADTNGDGQLS
Ga0222716_106626242	3300021959	Estuarine Water	MATKKINEDALILKATKAVNKELGIADKTPAAKMKSFNEKLKTAPTPFLYRIKDVWKAFAALMAGFFTIGFIIARITIPTE
Ga0255775_11193521	3300022907	Salt Marsh	MFREGEIMATRKINIDDLIKKGAKEVSKSVELSDKKTNAQIKSFEEKVKTASTPFLYRIKDVWKAFAALMAGFFTIGFIIARLTIPSETVMLTASVSPDI
Ga0255773_104089542	3300022925	Salt Marsh	MATRKINVDELIKKGAKEVSKSVEVSDKKTNAQIKSFEEKVKAASTPFLYRIKDVWKAFAALMAGFFTIGFIIARLTIPSETVMLTAAVSPDIYDFNTFDSDGDGEWTLAETQVAKEA
Ga0255769_101639153	3300022927	Salt Marsh	MVAKKINEDALILKAAKAVNKELGIADKTPAAKMKSFNEKVKAAPTPFLYRIKDVWKAFAALMAGFFTIGFIIARITIPTEAVLQTAAVSPDTY
Ga0255752_102975382	3300022929	Salt Marsh	MVAKKINEDALILKAAKAVNKELGIADKTPAAKMKSFNEKVKAAPTPFLYRIKDVWKAFAALMAGFFTIGFIIARITIPTEAVLQTAAVSPDTYDFNTFDGDGDGEWTLAEAQTAKQ
Ga0228684_10471512	3300023704	Seawater	MATRKIKYDALIKKVFKKVNKDLGVDAKTPPSQMKSFNEKLKAAPTPFLYRIKDVWKAFTALMAGFFTIGFIVARVTIPTETVVQTASISPDAHYFNAAD
(restricted) Ga0233438_103106921	3300024255	Seawater	MVTKKINEDALILKAAKAVNKELGIADKTPAAKMKSFNEKINAAPTPFLYRIKDVWKAFAALMAGFFTIGFIIARITIPTEAVLQTAAISPDTYDFNTFDSDGDGEWTLAE
(restricted) Ga0233444_103209842	3300024264	Seawater	MASKKINQDVLINKVFKKVKKDLSISNKTRAARIKSFNEKLKAAPTPFLYRIKEVWKAFVALMAGFFTVGFIIARLTIPTEAVLQTAAVSPDTYDFNAFDSDGDGEWTLAEAQQAKLALAIQQFEYADVNKD
Ga0228624_10843281	3300024313	Seawater	MATRKINEDALIKQVFKKVNKDLGVDAKTPPSQMKSFNEKLKAAPTPFLYRIKDVWKAFAALMAGFFTVGFIIARLTIPSETMMMTAS
Ga0209557_10831182	3300025483	Marine	MATKKINADALILKATKAVNKELGIADKTPAVRMKSFNEKLKAAPTPFLYRIKDVWKAFAALMAGFFSIGFIIARITIPTEAVLQTAAVSPDIYDF
Ga0209197_11399011	3300025637	Pelagic Marine	MATRKINVDELIKKGAKEVSKSIEVSDKKTNAQIKSFDEKVKAAPTPFLYRIKDVWKAFAALMAGFFTIGFIIARLTIPSETVMLTASVSPDIYDFNTFDSDGDG
Ga0209196_12098612	3300025654	Pelagic Marine	MAAKKINEDALIIKAAKAVNKELGIADKTPAAKMKSFNEKLKAAPTPFLYRIKDVWKAFAALMAGVFAIGFIIARLTIPTEAIVQIAAVSPDTYDFNTFDSDGDGE
Ga0209532_11091312	3300025696	Pelagic Marine	MATRKINEDALIKQVFKKVNKDLGIAAKTPPAQMKSFNEKLKATPTPFLYRIKDVWKAFAALMAGFFTIGFIIARLTIPSETVMLTASVSPDIYDFNTFDSDGDGE
Ga0209532_12187662	3300025696	Pelagic Marine	MATRKINQDALMKKALIAVNKDLGIAAKTPVAQMKSFNKKLNAAPIPLLDRIKDVWKAFGALMAGFFTIGFIIARLTIPSETVMMT
Ga0209602_12247622	3300025704	Pelagic Marine	MATRKINEDALIKKVFKKVNKDLGVDAKTPPSQMKSFNEKLKATPTPFLYRIKDVWKAFAALMAGFFTIGFIIARLTIPSETVMLTAAVSPDIYDFNTFDSDGDGEWTLAEAQ
Ga0209374_10639551	3300025705	Marine	MATRKINEDALIKKVFKKVNKDLGVDAKTPPSQMKSFNEKLKASPTPFLYRIKDVWKAFVALMAGFFTIGFIIARLTIPTEAVLQTAAISPDIYDFNTFDSDG
Ga0209305_11065461	3300025712	Pelagic Marine	MFREGEIMATRKINVDELIKKGAKEVSKSVEVSDKKTNAQIKSFEEKVKVASTPFLYRIKDVWKAFAALMAGFFTIGFIIARLTIPSETVMLTASVSPDIYDFNTFDSDGDGEWTLA
Ga0209305_11191061	3300025712	Pelagic Marine	MATRKINEDALIKKVFKKVNKDLGVDAKTPPAQMKSFNEKLKAAPTPFLYRIKDVWKAFTALMAGFFTIGFIVARLTIPTETVIQTASISPDAHYFNAADTNGDGQLSVAEVESGHTTWGNV
Ga0209199_11618162	3300025809	Pelagic Marine	MATRKINVDALIKKTAKEVSKSIKVSDKKTNEQIKSFNEKVKVAPTPFLYRIKDVWKAFTALMAGFFTIGFIVARVTIPTATETVVQTASISPDAHYFNAADTN
Ga0209199_12373252	3300025809	Pelagic Marine	MATKKINADALILKATKAINKELGIADKTPAVRMKSFNEKVKAAQTPFLYRIKDVWKAFAALMAGVFAIGFIIARLTIPTEA
Ga0209119_12602401	3300025860	Pelagic Marine	MATRKINEDALIKQVFKKVNKDLGIAAKTPPAQMKSFNEKLKATPTPFLYRIKDVWKAFAALMAGFFTIGFIIARLTIPSETVMLTASVSPDIYDFNTFDSDGDGEWTLAEAQQAKLALAIQQFEYADENQD
Ga0209666_13085761	3300025870	Marine	MVTRKINVDELIKKGAKEVSKSIEVSDKKTNAQIKSFEEKVKVASTPFLYRIKDVWKAFAALMAGFFTI
Ga0209533_12943242	3300025874	Pelagic Marine	MAAKKINEDALIIKAAKAVNKELGIADKTPAAKMKSFNEKLKAAPTPFLYRIKDVWKAFAALMAGVFAIGFIIARLTIPTEAIVQIAAVSPDTYD
Ga0209533_13568251	3300025874	Pelagic Marine	MATRKINVDELIKKSAKEVSKSIEVSDKKTNAQIKSFDEKVKAASTPFLYRIKDVWKAFAALMAGFFTIGFIIARLTIPSETVMLTASVSPDIYDFNTFDSDGDGEWTLA
Ga0209534_102823102	3300025880	Pelagic Marine	MATRKINVDALIKKTAKEVSKSIKVSDKKTNEQIKSFNEKVKVAPTPFLYRIKDVWKAFTALMAGFFTIGFIVARVTIPTATETVVQT
Ga0209534_103169691	3300025880	Pelagic Marine	MATRKINVDALIKKTAKEVSKSIEVSDKKTNAQIKSFDEKVKVAPTPFLYRIKDVWKAFVALMAGFFTIGFIIARLTIPSETVMLTAAVSPDIYDFNTFDSDGDGEWTLAEAQ
Ga0209534_104071472	3300025880	Pelagic Marine	MANRKINIDALIKKATKEVSKSIELSDKKTNAQIKSFEEKVEVASTPFLYRIKDVWRAFTALMVGFFTIGFIVARVTIPTATETVVQTASISPDAHYFNAADTNGDGQLSLAEVESGHTTWGN
Ga0209632_101738963	3300025886	Pelagic Marine	MLREGKIMATRKINQDALMKKALIAVNNDLGIAAKTPVAQMKSFNKKLNAAPIPLLDRIKDVWKAFGALMAGFFTIGFIIARLTIPSETVMMTASVSPDIYDFNTFDSDGDGEWTLAEAQQAKLA
Ga0209632_104455891	3300025886	Pelagic Marine	MATRKINVDELIKKGAKEVSKSIEVSDKKTNAQIKSFDEKVKATPTPFLYRIKDVWKAFAALMAGFFTIGFIIARLT
Ga0209632_104627202	3300025886	Pelagic Marine	MATRKINEDALIKQVFKKVNKDLGIASKTPPAQMKSFNEKLKAVPTPFLYRIKDVWKAFAALMAGFFTIGFIIARLTIPSETVMMTASVSPDIYDFNTFDSDGDGEWTLAEAQQAK
Ga0209631_101639263	3300025890	Pelagic Marine	MATRKINEDVLIKKALKAINKDLGVSDKSRAARIKSFSESIKAAPPSFLNRIKDVWKAFAALMAGFFTIGFIIARLTIPTET
Ga0209631_104595471	3300025890	Pelagic Marine	MATRKINVDALIKKATKEVSKSIELSDKKTNAQIKSFEEKVKVASTPFLYRIRDVWKAFAALMAGFFTIGFIIARLTI
Ga0209631_105099571	3300025890	Pelagic Marine	MFREGKIMVTRKINVDELIKKGAKEVSKSIEVSDKKTNAQIKSFEEKVKVASTPFLYRIKDVWKAFAALMAGFFTIGFIIARLTIPSETVMLTASVSPDIYDFNTFDSDGDGEWTLAEAQQAKLALAIQQFEY
Ga0209630_103105521	3300025892	Pelagic Marine	MATRKINEDELIKQVFKKVNKDLGIAAKTPPAQMKSFNEKLKATPTPFLYRIKDVWKAFAALMAGFFTIGFIIARLTIPSETVMLTASVSPDIYDFNTFDSDGDGEWTLAEAQQAKLALAIQQFEYADK
Ga0209630_103123892	3300025892	Pelagic Marine	MAAKKINEDALIIKAAKAVNKELGVSSKTPAAKMKSFNEKVNAAPTPFLYRIKDVWKAFAALMAGFFTIGFIIARITIPTEAVLQTAAVSPDIYDFNTFDGDGDGE
Ga0209335_101678611	3300025894	Pelagic Marine	MLREGKIMATRKINQDALMKKALIAVNKDLGIAAKTPAAQMKSFNKKLNAAPIPLIDRLKDVWKAFAALMAGFFTIGFIIARLTIPTEAVLQTAAISPDIYDFNTFDSDGDGEWTLAETQ
Ga0209335_101803463	3300025894	Pelagic Marine	MASKKIDQDALIKKVFKKVNKDMSISNKTRAAQIKSFNEKLKTAPTPFLYRIKEVWKAFAALMAGFFTIGFIIARITIPTEAVLQTAAVSPDI
Ga0209335_104556901	3300025894	Pelagic Marine	MVTRKINVDELIKKGAKEVSKSIEVSDKKTNAQIKSFDEKVKAASTPFLYRIKDVWKAFAALMAGFFTIGFIIARLTIPSE
Ga0209425_103040702	3300025897	Pelagic Marine	MATRKINVDALIKKTAKEVSKSIEVSDKKTNAQIKSFDEKVKAAPTPFLYRIKDVWKSFAALMAGFFTIGFIIARLTIPSETVMLTASVSPDIYDFNTFDSDG
Ga0209425_103450552	3300025897	Pelagic Marine	MAAKKINEDALIIKAAKAVNKELGIADKTPAAKMKSFNEKLKAAPTPFLYRIKDVWKAFAALMAGVFAIGFIIARLTIPTEAIVQI
Ga0209425_104273092	3300025897	Pelagic Marine	MATRKINVDELIKKGAKEVSKSVEVSDKKTNAQIKSFEEKVEKASTPFLYRIKDVWKAFAALMAGFFTIGFIIARLTIP
Ga0209425_104833822	3300025897	Pelagic Marine	MATKKINADALILKATKAINKELGIADKTPAVRMKSFNEKVKAAPTPFLYRIKDVWKAFAALMAGVFAIGFIIARLTIPTEAIVQI
Ga0209425_105061171	3300025897	Pelagic Marine	MATRKLNVDALIKKATKEVSKSIELSDKKTNAQIKAFEEKVKVASTPFLYSIKDVWKAFAALMAGFFTIGFIIARLTIPSETVMLT
Ga0247592_10793082	3300026500	Seawater	MATRKINVDELIKKGAKEVSKSIELSDKKTNAQIKSFDEKVKAASTPFLYRIKDVWKAFAALMAAFFTIGFIIARL
Ga0209710_12559571	3300027687	Marine	MATRKINVDELIKKGAKEVSKSVEVSDKKTNAQIKSFDEKVKAAPIPFLYRIKDVWKAFAALMAGFFTIGFIIARLTIPSETVMLTASVSPDIYDFNTFDSDGDG
Ga0209502_100380586	3300027780	Marine	MATRKINQDALIKKVFKKVNKDLGVAAKTPAAKLKSFNEKVKSAPTPFLYRIKDVWKAFAALMAGFFTIGFIIARLTIPTEAVLQTAAVSPDIYDFNTFDSDGDGEWTLAEA
Ga0209502_101701092	3300027780	Marine	MVTRKINVDALIKKVTKEVSKSVEVSDKKTNAQIKSFDEKVKAAPTPFLYRIKDVWKAFAALMAGFFTIGFIIARLTIPSETVMLTASVSPDIYDFNTFDSDGD
Ga0209502_102280711	3300027780	Marine	MATRKINEDALIKQVFKKVNKDLGIAAKTPTTQMKSFNEKLKAIPTPFLYRIKDVWKAFAALMAGFFTIGFIIARLTIPTEAVLQTASVSPDIYDFNTFDSDGNGEWTLAEAQQAKEAL
Ga0209502_104530941	3300027780	Marine	MQREGELMATRKINDDVLIKKALKAINKDLGVSDKSRAARIKSFSESLKTDPTPFLYRIKDVWKAFAALMAGFFTIGFIIARLTIPTETVMLTASVSPDI
Ga0209711_104621562	3300027788	Marine	MATRKINVDALIKKVTKEVSKSVEVSDKKTNAQIKSFDEKVKAAPIPFLYRIKDVWKAFAALMAGFFTIGFIIARLTIPSETVMLTASVSPDIYDFNTFDSDGDGEWTLAEAQQAKEAL
Ga0228674_12350371	3300028008	Seawater	MFREGEIMATRKINEDALIKKVFKKVNKDLGIADKTPPVQMKSFNEKLKAAPTPFLYRIKDVWKAFAALMAGFFTIGFIIARLTIPSETVMLTAAVSPDIYDFNTFDSDGDGEWTLAEAQQAKLALAI
Ga0256417_11543482	3300028233	Seawater	MATRKINEDALIKKVFKKVNKDLGVDTKTPPAQMKSFNEKLKAAPTPFLYRIKDVWKAFAALMAGFFTIGFIIARLTIPTEAVLQT
Ga0228627_11211251	3300028414	Seawater	MVAKKINEDALILKAAKAVNKELGVADKTPTAKMKSFNEKVKAAPTPFLYRIKDVWKAFAALMAGVFAIGFIIARLTIPTEAVLQTAAISPDTYDFNTFDSDGDGEWTLAETQVAK
Ga0307488_101044714	3300031519	Sackhole Brine	MATKKINEDALIIKAAKAVNKELGVSSKTPAAKMESFNEKVKAAPTPFLYRIKDVWKAFAALMAGFFTIGFIIARLTIPTEAVLQTAAVSPDIYDFNTFDSDGDGELTLAEAQTAKEAL
Ga0302116_11061391	3300031597	Marine	MATKKINEDALIIKAAKAVNKELGVSSKTPAAKMESFNEKVKAAPTPFLYRIKDVWKAFAALMAGFFTIGFIIARLTIPTEAVLQTAAVSPDIYDFNTFDSDGDGELTLAEAQT
Ga0302114_101788901	3300031621	Marine	MATKKINEDALIIKAAKAVNKELGVSSKTPAAKMESFNEKVKAAPTPFLYRIKDVWKAFAALMAGFFTIGFIIARLTIPTEAVLQTAAVSPDIYDFNTFDSDGDGELTLA

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.24
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.24
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F056325

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign