Metagenome / Metatranscriptome Family F056382

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F056382
Family Type	Metagenome / Metatranscriptome
Number of Sequences	137
Average Sequence Length	73 residues
Representative Sequence	IVHVREDRRNGAGLAGRFGSPGGRVKMFDKNLVHAIIGGKDLDCGSAELSVNLVLTRGHGSLLLDL
Number of Associated Samples	114
Number of Associated Scaffolds	137

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	23.36 %
% of genes near scaffold ends (potentially truncated)	75.91 %
% of genes from short scaffolds (< 2000 bps)	75.91 %
Associated GOLD sequencing projects	108
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (95.620 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (36.496 % of family members)
Environment Ontology (ENVO)	Unclassified (37.226 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (42.336 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 14.89% β-sheet: 14.89% Coil/Unstructured: 70.21%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.31
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.31
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 137 Family Scaffolds
PF07704	PSK_trans_fac	2.92
PF08818	DUF1801	2.19
PF14329	DUF4386	2.19
PF02852	Pyr_redox_dim	1.46
PF05163	DinB	1.46
PF13378	MR_MLE_C	1.46
PF09285	Elong-fact-P_C	1.46
PF00561	Abhydrolase_1	1.46
PF06441	EHN	0.73
PF00873	ACR_tran	0.73
PF11008	DUF2846	0.73
PF00581	Rhodanese	0.73
PF00534	Glycos_transf_1	0.73
PF00850	Hist_deacetyl	0.73
PF13439	Glyco_transf_4	0.73
PF00903	Glyoxalase	0.73
PF14237	GYF_2	0.73
PF00383	dCMP_cyt_deam_1	0.73
PF00899	ThiF	0.73
PF13305	TetR_C_33	0.73
PF03544	TonB_C	0.73
PF02371	Transposase_20	0.73
PF13360	PQQ_2	0.73
PF14559	TPR_19	0.73
PF12686	DUF3800	0.73
PF08327	AHSA1	0.73
PF04264	YceI	0.73
PF01565	FAD_binding_4	0.73
PF08031	BBE	0.73
PF00528	BPD_transp_1	0.73
PF00144	Beta-lactamase	0.73
PF01202	SKI	0.73
PF00076	RRM_1	0.73
PF13428	TPR_14	0.73
PF02321	OEP	0.73
PF01632	Ribosomal_L35p	0.73
PF13683	rve_3	0.73
PF12760	Zn_Tnp_IS1595	0.73
PF01872	RibD_C	0.73
PF00069	Pkinase	0.73
PF07730	HisKA_3	0.73
PF00291	PALP	0.73
PF00857	Isochorismatase	0.73
PF04014	MazE_antitoxin	0.73
PF13193	AMP-binding_C	0.73
PF00782	DSPc	0.73
PF13537	GATase_7	0.73
PF01425	Amidase	0.73
PF04613	LpxD	0.73

COG ID	Name	Functional Category	% Frequency in 137 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	2.92
COG4423	Uncharacterized conserved protein	Function unknown [S]	2.92
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	2.19
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	2.19
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	2.19
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	1.46
COG2318	Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.46
COG0123	Acetoin utilization deacetylase AcuC or a related deacetylase	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.46
COG0291	Ribosomal protein L35	Translation, ribosomal structure and biogenesis [J]	0.73
COG0596	2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold	Coenzyme transport and metabolism [H]	0.73
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.73
COG1044	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase	Cell wall/membrane/envelope biogenesis [M]	0.73
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.73
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.73
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.73
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.73
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.73
COG2353	Polyisoprenoid-binding periplasmic protein YceI	General function prediction only [R]	0.73
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.73
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.73
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	0.73
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.73
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.73
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	0.73
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.73
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.73
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	0.73

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.35 %
Unclassified	root	N/A	3.65 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.35 %
Unclassified	root	N/A	3.65 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.62 %
Unclassified	root	N/A	3.65 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	75.91 %
Unclassified	root	N/A	3.65 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.92 %
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	0.73 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	8.03 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	8.03 %
Unclassified	root	N/A	3.65 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.19 %
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	0.73 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.03 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	6.57 %
Unclassified	root	N/A	3.65 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.19 %
Cellvibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales	0.73 %
unclassified Thaumarchaeota	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → unclassified Thaumarchaeota	0.73 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.03 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6.57 %
Unclassified	root	N/A	3.65 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.19 %
Spongiibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Spongiibacteraceae	0.73 %
Thaumarchaeota archaeon 13_1_40CM_4_48_7	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → unclassified Thaumarchaeota → Thaumarchaeota archaeon 13_1_40CM_4_48_7	0.73 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.03 %
Unclassified	root	N/A	3.65 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.19 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	1.46 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	0.73 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.73 %
Spongiibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Spongiibacteraceae	0.73 %
Thaumarchaeota archaeon 13_1_40CM_4_48_7	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → unclassified Thaumarchaeota → Thaumarchaeota archaeon 13_1_40CM_4_48_7	0.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.03 %
Unclassified	root	N/A	3.65 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	1.46 %
unclassified Granulicella	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella	0.73 %
Granulicella mallensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	0.73 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.73 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	0.73 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.73 %
Spongiibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Spongiibacteraceae	0.73 %
Thaumarchaeota archaeon 13_1_40CM_4_48_7	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → unclassified Thaumarchaeota → Thaumarchaeota archaeon 13_1_40CM_4_48_7	0.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.03 %
Unclassified	root	N/A	3.65 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	1.46 %
Bradyrhizobium sp. Gha	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Gha	0.73 %
Granulicella sp. L46	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. L46	0.73 %
Granulicella mallensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	0.73 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	0.73 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.73 %
Spongiibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Spongiibacteraceae	0.73 %
Thaumarchaeota archaeon 13_1_40CM_4_48_7	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → unclassified Thaumarchaeota → Thaumarchaeota archaeon 13_1_40CM_4_48_7	0.73 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459017\|G14TP7Y02IFYTF	All Organisms → cellular organisms → Bacteria → Acidobacteria	563	Open in IMG/M
2199352024\|deeps_contig89399.53032	All Organisms → cellular organisms → Bacteria	1804	Open in IMG/M
3300001137\|JGI12637J13337_1021465	All Organisms → cellular organisms → Bacteria → Acidobacteria	574	Open in IMG/M
3300002245\|JGIcombinedJ26739_100020815	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	5643	Open in IMG/M
3300002561\|JGI25384J37096_10233004	All Organisms → cellular organisms → Bacteria → Acidobacteria	538	Open in IMG/M
3300005167\|Ga0066672_10553434	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	745	Open in IMG/M
3300005172\|Ga0066683_10212805	All Organisms → cellular organisms → Bacteria → Acidobacteria	1194	Open in IMG/M
3300005174\|Ga0066680_10217104	All Organisms → cellular organisms → Bacteria → Acidobacteria	1211	Open in IMG/M
3300005178\|Ga0066688_10457583	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	825	Open in IMG/M
3300005178\|Ga0066688_10821870	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	579	Open in IMG/M
3300005181\|Ga0066678_10900298	All Organisms → cellular organisms → Bacteria → Acidobacteria	579	Open in IMG/M
3300005445\|Ga0070708_100245686	All Organisms → cellular organisms → Bacteria → Acidobacteria	1681	Open in IMG/M
3300005445\|Ga0070708_100890895	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	835	Open in IMG/M
3300005447\|Ga0066689_10042947	All Organisms → cellular organisms → Bacteria → Acidobacteria	2384	Open in IMG/M
3300005447\|Ga0066689_10089271	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1746	Open in IMG/M
3300005468\|Ga0070707_100042269	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	4363	Open in IMG/M
3300005471\|Ga0070698_100412581	All Organisms → cellular organisms → Bacteria → Acidobacteria	1284	Open in IMG/M
3300005552\|Ga0066701_10309307	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	980	Open in IMG/M
3300005553\|Ga0066695_10500404	All Organisms → cellular organisms → Bacteria → Acidobacteria	746	Open in IMG/M
3300005556\|Ga0066707_10139762	All Organisms → cellular organisms → Bacteria → Acidobacteria	1527	Open in IMG/M
3300005556\|Ga0066707_10863177	All Organisms → cellular organisms → Bacteria → Acidobacteria	556	Open in IMG/M
3300005566\|Ga0066693_10008519	All Organisms → cellular organisms → Bacteria	2815	Open in IMG/M
3300005921\|Ga0070766_10387075	All Organisms → cellular organisms → Bacteria → Acidobacteria	914	Open in IMG/M
3300006034\|Ga0066656_10053136	All Organisms → cellular organisms → Bacteria	2343	Open in IMG/M
3300006854\|Ga0075425_100990909	All Organisms → cellular organisms → Bacteria → Acidobacteria	959	Open in IMG/M
3300007788\|Ga0099795_10146490	All Organisms → cellular organisms → Bacteria	964	Open in IMG/M
3300009012\|Ga0066710_100108794	All Organisms → cellular organisms → Bacteria	3736	Open in IMG/M
3300009012\|Ga0066710_102081641	All Organisms → cellular organisms → Bacteria → Acidobacteria	836	Open in IMG/M
3300009038\|Ga0099829_10371133	All Organisms → cellular organisms → Bacteria → Acidobacteria	1180	Open in IMG/M
3300009038\|Ga0099829_11437633	All Organisms → cellular organisms → Bacteria → Acidobacteria	569	Open in IMG/M
3300009088\|Ga0099830_10023905	All Organisms → cellular organisms → Bacteria	4028	Open in IMG/M
3300009088\|Ga0099830_11612486	All Organisms → cellular organisms → Bacteria → Acidobacteria	541	Open in IMG/M
3300009089\|Ga0099828_10843089	All Organisms → cellular organisms → Bacteria → Acidobacteria	820	Open in IMG/M
3300009089\|Ga0099828_11004552	All Organisms → cellular organisms → Bacteria → Acidobacteria	743	Open in IMG/M
3300009090\|Ga0099827_11148376	All Organisms → cellular organisms → Bacteria → Acidobacteria	675	Open in IMG/M
3300009137\|Ga0066709_101878228	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Gha	835	Open in IMG/M
3300009524\|Ga0116225_1517473	All Organisms → cellular organisms → Bacteria → Acidobacteria	530	Open in IMG/M
3300009618\|Ga0116127_1175937	All Organisms → cellular organisms → Bacteria → Acidobacteria	526	Open in IMG/M
3300009624\|Ga0116105_1011537	All Organisms → cellular organisms → Bacteria → Acidobacteria	1801	Open in IMG/M
3300009646\|Ga0116132_1132592	All Organisms → cellular organisms → Bacteria → Acidobacteria	761	Open in IMG/M
3300009665\|Ga0116135_1446034	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	530	Open in IMG/M
3300010159\|Ga0099796_10412428	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	594	Open in IMG/M
3300010304\|Ga0134088_10151546	All Organisms → cellular organisms → Bacteria	1103	Open in IMG/M
3300010329\|Ga0134111_10140571	All Organisms → cellular organisms → Bacteria	950	Open in IMG/M
3300010336\|Ga0134071_10301242	All Organisms → cellular organisms → Bacteria → Acidobacteria	805	Open in IMG/M
3300010379\|Ga0136449_103057917	All Organisms → cellular organisms → Bacteria → Acidobacteria	651	Open in IMG/M
3300010401\|Ga0134121_12245218	All Organisms → cellular organisms → Bacteria → Acidobacteria	583	Open in IMG/M
3300011120\|Ga0150983_13448515	All Organisms → cellular organisms → Bacteria → Acidobacteria	528	Open in IMG/M
3300011269\|Ga0137392_10961711	All Organisms → cellular organisms → Bacteria → Acidobacteria	702	Open in IMG/M
3300011271\|Ga0137393_10384082	All Organisms → cellular organisms → Bacteria → Acidobacteria	1202	Open in IMG/M
3300011271\|Ga0137393_11756985	All Organisms → cellular organisms → Bacteria → Acidobacteria	509	Open in IMG/M
3300012096\|Ga0137389_10163339	All Organisms → cellular organisms → Bacteria	1833	Open in IMG/M
3300012096\|Ga0137389_10184241	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → unclassified Thaumarchaeota → Thaumarchaeota archaeon 13_1_40CM_4_48_7	1730	Open in IMG/M
3300012096\|Ga0137389_10401720	All Organisms → cellular organisms → Bacteria → Acidobacteria	1170	Open in IMG/M
3300012198\|Ga0137364_10987627	All Organisms → cellular organisms → Bacteria → Acidobacteria	637	Open in IMG/M
3300012198\|Ga0137364_11005311	Not Available	630	Open in IMG/M
3300012199\|Ga0137383_10336923	All Organisms → cellular organisms → Bacteria → Acidobacteria	1105	Open in IMG/M
3300012205\|Ga0137362_10821151	All Organisms → cellular organisms → Bacteria	796	Open in IMG/M
3300012206\|Ga0137380_10028421	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5154	Open in IMG/M
3300012206\|Ga0137380_10111175	All Organisms → cellular organisms → Bacteria → Acidobacteria	2504	Open in IMG/M
3300012207\|Ga0137381_10165047	All Organisms → cellular organisms → Bacteria	1910	Open in IMG/M
3300012208\|Ga0137376_10302712	All Organisms → cellular organisms → Bacteria → Acidobacteria	1388	Open in IMG/M
3300012209\|Ga0137379_11071823	Not Available	711	Open in IMG/M
3300012351\|Ga0137386_10027439	All Organisms → cellular organisms → Bacteria	3867	Open in IMG/M
3300012351\|Ga0137386_10126384	All Organisms → cellular organisms → Bacteria → Acidobacteria	1820	Open in IMG/M
3300012356\|Ga0137371_10203124	All Organisms → cellular organisms → Bacteria	1552	Open in IMG/M
3300012359\|Ga0137385_10040288	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4188	Open in IMG/M
3300012361\|Ga0137360_10046112	All Organisms → cellular organisms → Bacteria → Acidobacteria	3117	Open in IMG/M
3300012362\|Ga0137361_10134622	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Spongiibacteraceae	2192	Open in IMG/M
3300012362\|Ga0137361_10542128	All Organisms → cellular organisms → Bacteria	1068	Open in IMG/M
3300012683\|Ga0137398_10050500	All Organisms → cellular organisms → Bacteria → Acidobacteria	2461	Open in IMG/M
3300012917\|Ga0137395_10846450	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300012918\|Ga0137396_10003940	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8442	Open in IMG/M
3300012922\|Ga0137394_10115800	All Organisms → cellular organisms → Bacteria → Acidobacteria	2266	Open in IMG/M
3300012923\|Ga0137359_11086441	All Organisms → cellular organisms → Bacteria → Acidobacteria	685	Open in IMG/M
3300012923\|Ga0137359_11396299	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	588	Open in IMG/M
3300012925\|Ga0137419_10579665	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	899	Open in IMG/M
3300012925\|Ga0137419_11929197	All Organisms → cellular organisms → Bacteria → Acidobacteria	507	Open in IMG/M
3300012927\|Ga0137416_10837925	All Organisms → cellular organisms → Bacteria → Acidobacteria	815	Open in IMG/M
3300012929\|Ga0137404_10716142	All Organisms → cellular organisms → Bacteria → Acidobacteria	906	Open in IMG/M
3300012930\|Ga0137407_10597777	All Organisms → cellular organisms → Bacteria → Acidobacteria	1035	Open in IMG/M
3300012931\|Ga0153915_11650124	All Organisms → cellular organisms → Bacteria → Acidobacteria	750	Open in IMG/M
3300012972\|Ga0134077_10310606	All Organisms → cellular organisms → Bacteria → Acidobacteria	664	Open in IMG/M
3300014152\|Ga0181533_1048056	All Organisms → cellular organisms → Bacteria → Acidobacteria	2234	Open in IMG/M
3300014153\|Ga0181527_1206983	All Organisms → cellular organisms → Bacteria → Acidobacteria	815	Open in IMG/M
3300014155\|Ga0181524_10236066	All Organisms → cellular organisms → Bacteria → Acidobacteria	868	Open in IMG/M
3300014160\|Ga0181517_10368208	All Organisms → cellular organisms → Bacteria → Acidobacteria	742	Open in IMG/M
3300014491\|Ga0182014_10003325	All Organisms → cellular organisms → Bacteria	19399	Open in IMG/M
3300014501\|Ga0182024_12330119	All Organisms → cellular organisms → Bacteria → Acidobacteria	582	Open in IMG/M
3300014638\|Ga0181536_10511838	All Organisms → cellular organisms → Bacteria → Acidobacteria	521	Open in IMG/M
3300014839\|Ga0182027_10580599	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. L46	1209	Open in IMG/M
3300015052\|Ga0137411_1004918	All Organisms → cellular organisms → Bacteria → Acidobacteria	848	Open in IMG/M
3300015052\|Ga0137411_1232437	All Organisms → cellular organisms → Bacteria → Acidobacteria	584	Open in IMG/M
3300015241\|Ga0137418_10009480	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8955	Open in IMG/M
3300015241\|Ga0137418_10084884	All Organisms → cellular organisms → Bacteria	2867	Open in IMG/M
3300015264\|Ga0137403_10105749	All Organisms → cellular organisms → Bacteria → Acidobacteria	2819	Open in IMG/M
3300015359\|Ga0134085_10261638	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	755	Open in IMG/M
3300017939\|Ga0187775_10541064	All Organisms → cellular organisms → Bacteria → Acidobacteria	500	Open in IMG/M
3300018024\|Ga0187881_10034619	All Organisms → cellular organisms → Bacteria → Acidobacteria	2583	Open in IMG/M
3300019881\|Ga0193707_1012622	All Organisms → cellular organisms → Bacteria	2852	Open in IMG/M
3300020001\|Ga0193731_1065546	All Organisms → cellular organisms → Bacteria → Acidobacteria	951	Open in IMG/M
3300020579\|Ga0210407_10515185	All Organisms → cellular organisms → Bacteria → Acidobacteria	935	Open in IMG/M
3300021178\|Ga0210408_10047500	All Organisms → cellular organisms → Bacteria → Acidobacteria	3360	Open in IMG/M
3300021181\|Ga0210388_10149676	All Organisms → cellular organisms → Bacteria	2028	Open in IMG/M
3300022532\|Ga0242655_10076549	All Organisms → cellular organisms → Bacteria → Acidobacteria	878	Open in IMG/M
3300024271\|Ga0224564_1021411	Not Available	1175	Open in IMG/M
3300024330\|Ga0137417_1303563	All Organisms → cellular organisms → Bacteria → Acidobacteria	1984	Open in IMG/M
3300024330\|Ga0137417_1430086	All Organisms → cellular organisms → Bacteria → Acidobacteria	1154	Open in IMG/M
3300025414\|Ga0208935_1045752	All Organisms → cellular organisms → Bacteria → Acidobacteria	584	Open in IMG/M
3300025460\|Ga0208562_1002010	All Organisms → cellular organisms → Bacteria → Acidobacteria	7003	Open in IMG/M
3300026342\|Ga0209057_1055242	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1837	Open in IMG/M
3300026377\|Ga0257171_1073480	All Organisms → cellular organisms → Bacteria → Acidobacteria	600	Open in IMG/M
3300026514\|Ga0257168_1044883	All Organisms → cellular organisms → Bacteria	964	Open in IMG/M
3300026524\|Ga0209690_1018266	All Organisms → cellular organisms → Bacteria	3583	Open in IMG/M
3300026530\|Ga0209807_1073793	Not Available	1524	Open in IMG/M
3300026542\|Ga0209805_1025752	All Organisms → cellular organisms → Bacteria	3040	Open in IMG/M
3300026542\|Ga0209805_1068134	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1737	Open in IMG/M
3300026552\|Ga0209577_10152614	All Organisms → cellular organisms → Bacteria → Acidobacteria	1815	Open in IMG/M
3300027663\|Ga0208990_1006336	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3916	Open in IMG/M
3300027674\|Ga0209118_1040058	All Organisms → cellular organisms → Bacteria → Acidobacteria	1411	Open in IMG/M
3300027829\|Ga0209773_10368212	All Organisms → cellular organisms → Bacteria → Acidobacteria	598	Open in IMG/M
3300027889\|Ga0209380_10533150	All Organisms → cellular organisms → Bacteria → Acidobacteria	683	Open in IMG/M
3300027903\|Ga0209488_10326314	All Organisms → cellular organisms → Bacteria → Acidobacteria	1143	Open in IMG/M
3300027905\|Ga0209415_10014853	All Organisms → cellular organisms → Bacteria	12688	Open in IMG/M
3300027986\|Ga0209168_10206972	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	980	Open in IMG/M
3300028047\|Ga0209526_10050876	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2918	Open in IMG/M
3300030906\|Ga0302314_10629537	Not Available	1114	Open in IMG/M
3300031708\|Ga0310686_103324829	All Organisms → cellular organisms → Bacteria → Acidobacteria	4037	Open in IMG/M
3300031708\|Ga0310686_111517709	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4821	Open in IMG/M
3300031820\|Ga0307473_10464487	All Organisms → cellular organisms → Bacteria → Acidobacteria	846	Open in IMG/M
3300033829\|Ga0334854_045301	All Organisms → cellular organisms → Bacteria → Acidobacteria	1054	Open in IMG/M
3300033887\|Ga0334790_180203	All Organisms → cellular organisms → Bacteria → Acidobacteria	617	Open in IMG/M
3300034085\|Ga0373908_095545	All Organisms → cellular organisms → Bacteria → Acidobacteria	585	Open in IMG/M
3300034091\|Ga0326724_0135423	All Organisms → cellular organisms → Bacteria → Acidobacteria	1550	Open in IMG/M
3300034091\|Ga0326724_0574874	All Organisms → cellular organisms → Bacteria → Acidobacteria	564	Open in IMG/M
3300034124\|Ga0370483_0303484	All Organisms → cellular organisms → Bacteria → Acidobacteria	551	Open in IMG/M
3300034282\|Ga0370492_0487004	All Organisms → cellular organisms → Bacteria → Acidobacteria	501	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.81%
Engineered	Engineered	1.46%
Host-Associated	Host-Associated	0.73%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.59%
Aquatic	Environmental → Aquatic	10.22%
Plants	Host-Associated → Plants	0.73%
Solid Waste	Engineered → Solid Waste	0.73%
Bioremediation	Engineered → Bioremediation	0.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	83.94%
Freshwater	Environmental → Aquatic → Freshwater	10.22%
Peat	Environmental → Terrestrial → Peat	3.65%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.73%
Grass	Engineered → Solid Waste → Grass	0.73%
Metal	Engineered → Bioremediation → Metal	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	70.80%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	10.22%
Loam	Environmental → Terrestrial → Soil → Loam	8.76%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.38%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.73%
Composting	Engineered → Solid Waste → Grass → Composting	0.73%
Unclassified	Engineered → Bioremediation → Metal → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	48.18%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	17.52%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.84%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	5.11%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	5.11%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.11%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.92%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.19%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.73%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.73%
Unclassified	Engineered → Bioremediation → Metal → Unclassified → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	36.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	14.60%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	4.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.38%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.38%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	3.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.65%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.65%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.92%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.19%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.46%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.46%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.46%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.46%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.73%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.73%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.73%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.73%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.73%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.73%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.73%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.73%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.73%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.73%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.73%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.73%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.73%
Sediment Slurry	Engineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry	0.73%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459017	Litter degradation ZMR4	Engineered	Open in IMG/M
2199352024	Bare-fallow DEEP SOIL	Environmental	Open in IMG/M
3300001137	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009618	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_100	Environmental	Open in IMG/M
3300009624	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10	Environmental	Open in IMG/M
3300009646	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_150	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014152	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_60_metaG	Environmental	Open in IMG/M
3300014153	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_60_metaG	Environmental	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300014160	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014638	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015052	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300018024	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100	Environmental	Open in IMG/M
3300019881	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2	Environmental	Open in IMG/M
3300020001	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024271	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU5	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025414	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10 (SPAdes)	Environmental	Open in IMG/M
3300025460	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026377	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-B	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027663	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300030906	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300033829	Peat soil microbial communities from Stordalen Mire, Sweden - 715 P2 1-5	Environmental	Open in IMG/M
3300033887	Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-1-X1	Environmental	Open in IMG/M
3300034085	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - B3A4.3	Engineered	Open in IMG/M
3300034091	Peat soil microbial communities from McLean, Ithaca, NY, United States - MB00N	Environmental	Open in IMG/M
3300034124	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14	Environmental	Open in IMG/M
3300034282	Peat soil microbial communities from wetlands in Alaska, United States - Eight_mile_03D_16	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
4ZMR_00199290	2170459017	Switchgrass, Maize And Mischanthus Litter	PLGADIVHVREDRRNGAGLTGRLGSPGGRVKMFDKKLVYTIIGGKDLDCGSAHLRVSLALTRGH
deeps_00720580	2199352024	Soil	IELPRDLQMWSCKPDPLGADIVHVGEDCSDGADLARRFGSPGGGLEIFDQELVDAIVSGKDLDSGSAELRGILG
JGI12637J13337_10214651	3300001137	Forest Soil	MRSGKPDPLAADIVHVREDRRNGAGRHLAVRAGRFGSPGGRVKMFDKNLVHAIIGGKDLDCGSAELSVNLVSTRGHGSLLLDL*
JGIcombinedJ26739_1000208151	3300002245	Forest Soil	MVHVREDRRNGAGLAGRFGSPGGRVKMFDNKLVHAIIGGEDLDCGSAEVECVNLVLTRAHGSLFLDL*
JGI25384J37096_102330041	3300002561	Grasslands Soil	WNLQVRSCKPDPLGADIVHVREDRRNGAGLAGRFGSPGGRVKMFDKNLVHAIIGGKDLDCGSAELSVNLGLTRGHGS*
Ga0066672_105534342	3300005167	Soil	DRRNGAGRSVAGRAGRFGSPGGRVKMFDKNLVHAIIGGKDLDCGSAELSVNLGLTIDVLTRGHGSLLLDL*
Ga0066683_102128052	3300005172	Soil	VREDRRNGAGLAGRSGTPGGRVKMFDNNLVHAIVGEKDPGGKVLDCGSAELSVNLGLTRWSRLATP*
Ga0066680_102171041	3300005174	Soil	KPDPLGADIVHVREDRRNGADLAGRFGAPGSRVKMFDKHLVHAIIGGKDLDCGSAQFRVNLPRVNLSRVNLRLTRGHGSLLLDL*
Ga0066688_104575833	3300005178	Soil	CKPDPLAADIVHVREDRRNGADFVFAGRIGSPDGRVKMFDKNLVHAITGGKDLDCGSAELSVNLGLTIGALTRGHGSLLRNL*
Ga0066688_108218701	3300005178	Soil	ADIVHVREDRRNGADVVFSGVFAGRFGCRRSGTPGGRVKMFDKHLVHAIIGEKDPGGKVLDCGSAELSVNLGLTRGHGSLLLDL*
Ga0066678_109002982	3300005181	Soil	VHVSEDRRNGARLAGRFGSPGARVKMFDKNLVHAIVGGKDPDCGLAELSVNLVLARGHGSRLLGL*
Ga0070708_1002456863	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	LGADIVHVREDRGDGADFVFAGRFGCRFCCPGGRVKMFDKHLVHAIIGGKDLDCGSAELSVNLGLTRGHGSLLLDL*
Ga0070708_1008908951	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VHVGEDRRNGAGLAGRFGSPGGRVKMFDKNLVDAIIGGKDLDCGSAQLCVNLLSVNLFMDDREAVNVLTRGHGSLLLDLIILQGRRPSGM*
Ga0066689_100429471	3300005447	Soil	VRSCKPDPLGADIVHVREDRRNGAGLAGRFGSPGGRVKMFDKNLVHAIVGEKDPGGKVLDCGSTELSVNLGLTIDVLTRGHGSLLLDL*
Ga0066689_100892711	3300005447	Soil	KPDPLAADIVHVGEDRGNGAGLAGRFGCRRFGFPGGRVKMFDKHLVHALIGGKDLDCGSAELSVNLGLRRGHGSLLLDL*
Ga0070707_1000422691	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MQRRLVEQAAAETAADIVHVREDRRNGADLAGRFGSPGGRVKMFDKNLVHAIIGGKDLDCGSAELSVN
Ga0070698_1004125811	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MQRRLVEQAAAETAADIVHVREDRRNGADLAGRFGSPGGRVKMFDKNLVHAIIGGKDLDCGSAELSVNLVLTRGHGSLLLDL*
Ga0066701_103093073	3300005552	Soil	CKPDPLAADIVHVREDRRNGADFVFAGRIGSPDRRVKMFDKNLVHAITGGKDLDCGSAELSVNLGLTIGALTRGHGSLLRNL*
Ga0066695_105004041	3300005553	Soil	VRSCKPDPLGADIVHVREDRRNGAGLAGRFGFPGGRVKMFDENLVHAIIGGKDLDCGSAELSVNLVLTRGHGSLLLDL*
Ga0066707_101397621	3300005556	Soil	LQVRSCKPDPLGADIVHVREDRRNGAGFAGRFGSPGGRVKMFDKNLVHAIIGGKDPDRGSAELSVNLVLTRGHASLLLDL*
Ga0066707_108631772	3300005556	Soil	LGADIVHVREDRRNGAGLAGRFGSPGGRVKMFDKNLVHAIVGEKDPGGKVLDCGSTELSVNLGLTIDVLTRGHGSLLLDL*
Ga0066693_100085194	3300005566	Soil	IVHVREDRRNGADVVFSGVFAGRFGCRRSGSPGGRVKMFNKNLVHAIIGEKDPGGKVLDCGSAELSVNLGLTIDDLTRGHGLP*
Ga0070766_103870754	3300005921	Soil	GIVHVREDRRNGAGLAGRFGPPGDRVKMFNENLVHPIIGGKDPNRGSAELSVNLGLTRGHGS*
Ga0066656_100531364	3300006034	Soil	AGRFGCRRSGSPGGRVKMFNKNLVHAIIGEKDPGGKVLDFGSAELSVNLGLTIDDLTRGHGLP*
Ga0075425_1009909092	3300006854	Populus Rhizosphere	ADIVHVREDRGDSAGLAGWFGSPGTRVKVFDQNLVHAIIGGKDPDRGAAELSVNLMLTRGHG*
Ga0099795_101464903	3300007788	Vadose Zone Soil	VHVGEDCRDGAGFARRIGFPGARVEMLDKNLVHAFIGGKDLNCGSVELCVNFVLTRGHGSSFIRRSPTGIFYVC*
Ga0066710_1001087945	3300009012	Grasslands Soil	QMRSCKPDPLAADIVHVRKDRRNGAGRSVAGRAGRFGSPGGRVKMFDKNLVHAIIGGKDLDCGSAELSVNLGLTIDVLTRGHGSLLLDL
Ga0066710_1020816411	3300009012	Grasslands Soil	RSWNLQVRSCKPDPLAADIVHVREDRRNGAGLARRFGSPCGRVKMFDEKLVHALIGGKDLDCGSAELSVNLGLTRAHGSLLRDL
Ga0099829_103711331	3300009038	Vadose Zone Soil	PDPLGADIVHVREDRRNGADLVFAGRFGSPGGRVKMFEKNLVHAIIGAKDPDCGSAELSLNRGLTRGHGSLLLDL*
Ga0099829_114376332	3300009038	Vadose Zone Soil	PLAADIVHVREDCRNGAGRHLAGRAGRFGSPGGRIKMFDKDLVHVIVGGKDLDRGSAELSVNLGLTMGALTRGHGSLAPLPMIVLGQSILW*
Ga0099830_100239055	3300009088	Vadose Zone Soil	VHWREDRRNGADLVFAGRFGCRFGCPGGRVEMFDKHLVHAIVHEKDPGGKDLHCGSAELSVNLGLTRGHGSLLPDL*
Ga0099830_116124862	3300009088	Vadose Zone Soil	DIVHVRENRHNGTGLAGRFGSPDGRVKMFDKNLVHPIIDCKNLDCRSAELSVNLVLTRGHGSLFLDL*
Ga0099828_108430892	3300009089	Vadose Zone Soil	VNDLRAASDRRKGADLVFAGRFGSPGGRVKMFDKHLVHALIGGKDLDCGSAELRVNLLRVNLFMDDREAVNVLTRGHGSLLLD
Ga0099828_110045523	3300009089	Vadose Zone Soil	VHVREDRRNGADLLFAGRFGSPGGRVEMFDKNLVHAIISGKDLDRGSAELSVNLGLTRGHGCLFLDL*
Ga0099827_111483762	3300009090	Vadose Zone Soil	ADIVHVREDRRNRADLAGRFGSPGGRVKMFDKNLVDAIIGGKDLDCGSAQLRVKSSVNLVLTRGHGSLVLDLSYVRAVGHPEVIHFIRHAEPPGD*
Ga0066709_1018782281	3300009137	Grasslands Soil	REDRRNGAGLAGRSGTPGGRVKMFDNNLVHAIVGEKDPGGKVLDCGSAELSVNLGLTRWSRLATP*
Ga0116225_15174731	3300009524	Peatlands Soil	RQPDPLGPDIVHVREDGGYGTDFAGRFGAPGGRVKMFDENLVDAVVGVKDLDRGAAELGVKFELTGGHGAVLRNL*
Ga0116127_11759371	3300009618	Peatland	KPDPLAADIVHVREDRHNGAGLAGRFGFPGGRLKMFDKNLVHAIVGGKDPDCGSAELSVNPGLTIGVLTRGHGFLLLDL*
Ga0116105_10115374	3300009624	Peatland	VHVREDGRDGAGLAGRFGAPGGGVEMFDQKLVDAIVGGEDADCGRAELSFNLGLTRGNGLATPRLIIFRVGE*
Ga0116132_11325921	3300009646	Peatland	RRNGAGLAGRFSSPGGRVKMFDKNLVHAIIGGKDLDCGPAELSVNLVLTRGHGSLLLDL*
Ga0116135_14460343	3300009665	Peatland	GRNGADLAGRFGSPGGGVKMFDKNLVDAIIGGKHLDRGSAELSGNLGLTRGHGCLLPDL*
Ga0099796_104124281	3300010159	Vadose Zone Soil	MRSRKPDPLGAHIVHVREDRRNSAGFAFAGRFRFPGSRIKMFDQNLVDPIIDGKDLDCGAAELSVNPGLTRGHGSYSLTYSTFESSFKEKR*
Ga0134088_101515462	3300010304	Grasslands Soil	LERTLHVREDRRNGAGLAGRSGTPGGRVKMFDNNLVHAIVGEKDPGGKVLDCGSAELSVNLGLTRWSRLATP*
Ga0134111_101405712	3300010329	Grasslands Soil	VFSGVFAGRFGCRRSGPPGGRVKMFDKNLVDAIVGEKDPGGKVLDCGSAELSVNLGLTRGHGSLLLDL*
Ga0134071_103012422	3300010336	Grasslands Soil	EDRRNGAGLAGRFGSPGGRVEMFDKNLIDPIIGGKDLDCGSAQLRAMLSVNLM*
Ga0136449_1030579172	3300010379	Peatlands Soil	KPDPLGPDIVHVREDRRNGADLAGRFGPPGGRVKMFDENLVHAIIGGKDLNCGSAESSVNLALTRGHGSLLLDL*
Ga0134121_122452181	3300010401	Terrestrial Soil	MRSGEPDPLGADIVHVGEDRRNGAGLAGRFGSPGGGVKMFNKNLIYAIVGGKDLDCGSGGLRFGH
Ga0150983_134485152	3300011120	Forest Soil	VRSGKPDPLAADVVHVREDRRNSACLAGRFGFPCGGVKMFDKKLVHAIIGGKDADCGSAELSVNLVLTRGHGSLLLEP*
Ga0137392_109617112	3300011269	Vadose Zone Soil	VHVREDRRNGADLAGRFGSPGGRVKMFDKNLVDAIIGGKDLDCGSAQLSVKLSVNLVLTRGHGSLLLDL*
Ga0137393_103840822	3300011271	Vadose Zone Soil	DPLGADIVHVREDRRNGAGLAGRFGSPGGRVKMFDKNLVHAIIGGKDLDCGSAELSVNLVLTRGHGSLLLDL*
Ga0137393_117569851	3300011271	Vadose Zone Soil	MHVREDCHDAADLAGRFGSPDGRIKMFDKNLVHAIIGGKDPDCGSAELSVNLGLTIGALTRGHGSLLLDL*
Ga0137389_101633392	3300012096	Vadose Zone Soil	VHWREDRRNGADLVFAGRFGCRFCCPGGRVEMFDKHLVHAIVHEKDPGGKDLHCGSAELSVNLGLTRGHGSLLPDL*
Ga0137389_101842415	3300012096	Vadose Zone Soil	AADVVHVREDRRNGAGLVFAGWFGSPDGKVKMFDKSPVHAIISGKDLDCGSAELSVNLGLTRGHGSLLLDL*
Ga0137389_104017204	3300012096	Vadose Zone Soil	PLAADIVHVAEDRRNGAGLVFAGRFGSPGGRVKMFDKNLVHALIGGKDLDRGSAELSVNLGLTIGALTRGHGSLLLDL*
Ga0137364_109876272	3300012198	Vadose Zone Soil	SGVFAGRFGCRRSGPPGGRVKMFDKNLVDAIVGEKDPGGKVLDCGSAELSVNLGLTRGHGSLLLDL*
Ga0137364_110053111	3300012198	Vadose Zone Soil	NGAGVVFSGVFAGRFGCRRSGPPGGRVKMFDKNLIDAIVGEKDPGGKVLDCGSAELSVNLVLMRGHGSLLLDL*
Ga0137383_103369231	3300012199	Vadose Zone Soil	ADLAGRFGSPGGRVKMFDKNLVDAIIGGKDLDCGSAQLRAKLSVNLVLARGHGSSLLDL*
Ga0137362_108211511	3300012205	Vadose Zone Soil	NATDLAGRFGSPGGRVKMFDKSLVHAIIGGKDLDCGSAELSVNLGLTRAHRSLLLDLSYF
Ga0137380_100284211	3300012206	Vadose Zone Soil	PDPLAADIVHVCEDRRNATDLAGRFGSPGGRVKMFDKSLVHAIIGGKDLDCGSAELSVNLGLTRAHRSLLLDLSYF*
Ga0137380_101111754	3300012206	Vadose Zone Soil	KPDPLGADIVHVREDRRNGAGLAGRFGSPGGGVKMLDKNLVHAIIGGKDLNCGSAQLSVKSSVNLVLTRGHGSLLLDL*
Ga0137381_101650473	3300012207	Vadose Zone Soil	VHVREDRRNGADVVFSGVFAGRFGCRRFGFPGGWVKMFDKNLIDAIIGGKDLDCGSAELSVNLVLTRGHGSLLLDL*
Ga0137376_103027122	3300012208	Vadose Zone Soil	WNLQVRSCKPDPLGADIVHVREDRRNGAGFAGRFGSPGGRVKMFDKNLVHAIIGGKDPDRGSAELSVNLVLTRGHASLLLDL*
Ga0137379_110718231	3300012209	Vadose Zone Soil	ADIVHVREDRRNGAGLAGRFGSPGGGVKMLDKNLVHAIIGGKDLNCGSAQLSVKSSVNLVLTRGHGSLLLDL*
Ga0137386_100274391	3300012351	Vadose Zone Soil	CKPDPLGADIVHVREDRRNGAGFAGRFGSPGGRVKMFDKNLVHAIIGGKDLDRGSAELSVNLVLTRGHASLLLDL*
Ga0137386_101263844	3300012351	Vadose Zone Soil	MRSCKPDPLAADIVQVCEDRRNATDLARRFGSPGGRVKMFDKSLVHAIIGGKDLDCGSAELSVNLGLTRAHRSLLLDLSYF*
Ga0137371_102031242	3300012356	Vadose Zone Soil	VFSGVFAGRFGCRRSGTPGGRVKMFDKNLVDAIVGEKDPGGRDLDCGSAELSLNLGLTIGALTRGHGSLLLDL*
Ga0137385_100402881	3300012359	Vadose Zone Soil	VRSCKPDPLAADIVHVCEDRRNATDLARRFGSPGGRVKMFDKSLVHAIIGGKDLDCGSAELSVNLGLTRAHRSLLLDLSYF*
Ga0137360_100461121	3300012361	Vadose Zone Soil	LGADIVHVREDRRNGAGLAGRIGFPGARVKVVGKNLVHAIIGGKDLDCGSTELSVIFVLTRGHGSLLLGL*
Ga0137361_101346223	3300012362	Vadose Zone Soil	RRNGAGLARRFGSPGGRVKMFDKNLVHAIIGAKELDCGSAELSVNLVLTRGHDSLLLDL*
Ga0137361_105421281	3300012362	Vadose Zone Soil	DRRNGADLAGRFGSPGGRVKMFDKNLVDAIIGGKDLDCGSAQLSVKLSVNLVLTRGHGSLLLDL*
Ga0137398_100505004	3300012683	Vadose Zone Soil	VDVREDRRNGTDIAGRFGSPGGRVKMFDKDLVHAITGGESLDCGSAELSVNLMLSRGHGPYSLTYNTSRPSATRN*
Ga0137395_108464503	3300012917	Vadose Zone Soil	HVREDRRNSAGRHLAGRAGRFGSPGGRVKMFDKHLVHAIIGGKDLDCGSPELSVHLGLMIGALTRSHGSLAP*
Ga0137396_100039408	3300012918	Vadose Zone Soil	CKPDPLGADIVQVREDRRNGAGLAGRFGSPGGRVKMSDKNLGHAIIGGKDLDCASAELSVNLGLRRGHGSLLLDL*
Ga0137394_101158004	3300012922	Vadose Zone Soil	KPDPLGADIVHVREDRRNGADLAGRFGSPGGRVKMFDKHLVHALIDGKDLDGGSSQFRVKKSRVNLLSVNLRLTRGHGSLLLDP*
Ga0137359_110864412	3300012923	Vadose Zone Soil	EDRSDGAGAGIAGRLGRRFCGPGGRVKMFDKNLVHPIVGGKDLECGSAELSVNLTQIFLVW*
Ga0137359_113962991	3300012923	Vadose Zone Soil	SCKPDPLGADIVHVREDRRNAAGLAGRFGSPGGRVKMFDENLVHAIINGKDLDCGSAELSLNLGLMRGHGSLLLDL*
Ga0137419_105796651	3300012925	Vadose Zone Soil	LAADIVHVREDRHNGAGLAGRFGSPGSTVKMFDKNLVHALIGGKDLDCGSAELSVNLVLTRGHGSLLLDP*
Ga0137419_119291971	3300012925	Vadose Zone Soil	MHVREDRRNGADLAGRFGSPGGEVKMFDKNLVHAIIGGKDLNCGSAELRVNLVLTGGHGSLLLDLYYFSCPT*
Ga0137416_108379251	3300012927	Vadose Zone Soil	VHVREDRRNGAGLAGRFGFPCRRVKMFDKNLVHAIIGGKDLDCRSAELSLNLVLTRGHGSLFLDL*
Ga0137404_107161422	3300012929	Vadose Zone Soil	VHVREDRRNCADLAGRPGSPGGRVKMFDKNLVHAIIGGKDLDCGSAELSANLVLTRGHGSLLLDL*
Ga0137407_105977773	3300012930	Vadose Zone Soil	WNLQVRSCKPDPLGADIVHVREDRRNRAGLAGRLGSPGCRVKMFDENLVHAIIGGKDLDCGSGELSVNLV*
Ga0153915_116501241	3300012931	Freshwater Wetlands	IVHVREDRRNGAGLAGRFGSPGGRVKMFDKNLVHAIIGGKDLDCGSAELSVNLVLTRGHGSLLLDL*
Ga0134077_103106062	3300012972	Grasslands Soil	KPDPLGADIVHVREDPRNRAGLAGRLGSPGGRVKMFDKNLVHAIIGGKDLDCGSAELSVNLVLTRGHGSLLLDL*
Ga0181533_10480561	3300014152	Bog	IVHVREDRHNGAGLAGRFGSPGRRVKMFDKNLVHAIVGGKDLDCGSAELSVNPGLTIGVLTRGHGFLLLDL*
Ga0181527_12069831	3300014153	Bog	CKPDPLGADIVHVREDRRNGAGLAGRFGSPGGRVKMLDKNLVYAIIGGKDLDCGSAELSVNLVLMRGHGSLLLDL*
Ga0181524_102360661	3300014155	Bog	LGADIVHVREDRRNGAGLAGRFGSPGGRVKMLDKNLVYAIIGGKDLDCGSAELSVNLVLMRGHGSLLLDL*
Ga0181517_103682082	3300014160	Bog	KPDPLGADIVHVREDRRNGAGLAGRFGSPGGRVEMFDKNLVDAIVGGKDPDCGSAELSVNLGLTRGRGSLLLDL*
Ga0182014_1000332515	3300014491	Bog	MPPLSATPAGRLGFPRGSVKMFDEDLVDAIIGGKNLDCGLAQLSVKLGLVRGHGSALLDR
Ga0182024_123301192	3300014501	Permafrost	WNLQVRSCKPDPLGADIVHVREDRRYGADLARRFGSPGGRVKMFDKNLVHAIVGGKDLDRGSAELSVNLVLTRGHGSLLLDL*
Ga0181536_105118381	3300014638	Bog	VHVREDGGNGAGLAGWFGSPGGRVKMFDKNLVHAIIGGKDLDCGSAELSVNLGLTRGHGSLLLDLQYSRVVGDTETIVLCH
Ga0182027_105805991	3300014839	Fen	LAGRFGSPGGGIEIFDKHLVHAIIGGKDPDCGSAKVSLVLTSRHGSLLLGPSYFRAVENDRPISRK*
Ga0137411_10049182	3300015052	Vadose Zone Soil	VHVREDRRNGADCVFAGRFGSPRGRVKMFDKNLVHPIVGGKDLDRGSSELSVNLGLTIDDLTRGHGSLLLAL*
Ga0137411_12324371	3300015052	Vadose Zone Soil	EDRRNGADLAGRFGAPGSRVKMFDKHLVHAIIGGKDLDCGSAQFRVNLPRVNLSRVNLRLTRGHGSLLLDL*
Ga0137418_100094808	3300015241	Vadose Zone Soil	HVREDRRNGAGLAGRFGSPGGRVKMSDKNLGHAIIGGKDLDCASAELSVNLGLRRGHGSLLLDL*
Ga0137418_100848841	3300015241	Vadose Zone Soil	HVREDRRNGAGLAGRFGSPGGRVKMFDKNLVHAIIGGKDLDCGSAELSVNLVLTRGHGSLLLYL*
Ga0137403_101057496	3300015264	Vadose Zone Soil	EDRRNGADLAGRFGSPGGRVKMFDKHLVHALIDGKDLDGGSSQFRVKKSRVNLLSVNLRLTRGHGSLLLDP*
Ga0134085_102616381	3300015359	Grasslands Soil	IVHVREDRRDGADLAGRFGSPGDRVKMFDKNLVHAIIGGKDLDCGSAELSVNLGLTRGHGS*
Ga0187775_105410641	3300017939	Tropical Peatland	VHVREDRRNGAGLAGRFGSPGGKVKMFDKNLVHAIIGGKDLDCGSAESSVNLVLMRGHGSLLLDL
Ga0187881_100346193	3300018024	Peatland	VHVREDGRNAADVAGRFGSPGGRVKMFDENLVDAIVGAKDLDCGSPQLRVDLGLTRGHGSLLLT
Ga0193707_10126221	3300019881	Soil	VREDRCNAADLGGRFGSPGGRVEMFDKNLVDAIIGGKDLNCGTAELSVNLGLTRGRVAHSSPVLA
Ga0193731_10655462	3300020001	Soil	VRSCKPDPLAADIVHVREDRCNAADLGGRFGSPGGRVEMFDKNLVDAIIGGKDLNCGTAELSVNLGLTRGRVAHSSPVLA
Ga0210407_105151852	3300020579	Soil	WNLQVWSCKPDPLGADIVHVREDRRNGADLAGRFGFPCGRVKMFDKSLVHAIIGDKDLNCGPAELSVNLVLRRGHGCLLP
Ga0210408_100475001	3300021178	Soil	MVHVREDRRNGAGLAGRFGSPGGRVKMFDKRLVHAIIGGEDLDCGSAELSVNLVLTRVHGSLLLDL
Ga0210388_101496761	3300021181	Soil	GRFGSPSGRVKMFDKHLVHALIRGKDLDCGSAQLRMNLSCVSLPSLNLLLTLGQGSLPLDLCIFQVRGQIRNSAE
Ga0242655_100765492	3300022532	Soil	DRRNAAGLTRRFGSPGGRVKMFDKNLVDAIIGGKDLDCGSAEWSVNSVLARGHGSLILDL
Ga0224564_10214112	3300024271	Soil	ADIVHVREDRRNGAGVTGRFGWRFGFPGGRVKMFDEKLVHALIGGKDLEGGSAELSVNLVSMRGHGSLLPDL
Ga0137417_13035631	3300024330	Vadose Zone Soil	MRRCKPDPLAADIVHVREDRRNAADLAGRLSSPGGRIKMFEEHLVHALVGGKDPDCGLAELRVNLGLTRGH
Ga0137417_14300862	3300024330	Vadose Zone Soil	VRAAADAELQVRSGKPDPLAADIVHVREDRSNRAGLAGRFGSPGGRVKMFDKHLVHALIDGKNLNRGSAQLCVNLFSLNLG
Ga0208935_10457521	3300025414	Peatland	VHVREDGCDGADLARRFGCPGGRVKMGDKNLVHAIIGGKDLDCGSANLNMDSGLTSGHGSLPLDIIFPGRRPF
Ga0208562_10020106	3300025460	Peatland	DIVHVREDRHNGAGLAGRFGSPGGRVKMFDKNLVHAIIGGKDLDCGSAELSVNPGLTIGVLTRGHGFLLLDL
Ga0209057_10552421	3300026342	Soil	GADVVFSGVFAGRFGCRRSGTPGGRVKMFDKNLVDTIVGEKDPGGKVLDCGSAELSVNLGLTIDDLTRGHGSLLLDL
Ga0257171_10734802	3300026377	Soil	RSCKPDPLAADIVHVREDRHNGACLAGRFGSPGGRIKMFNKNLVHAIIGGKDLYCGSAELRVNLVLTRGHGSLLPDL
Ga0257168_10448832	3300026514	Soil	DRRNGAGRHLAGRAGRFGSPGGRVKMFDKHLVHALIGGKDLDCGSAELSVNLALTRGHGSLLLDL
Ga0209690_10182662	3300026524	Soil	LHVREDRRNGAGLAGRSGTPGGRVKMFDNNLVHAIVGEKDPGGKVLDCGSAELSVNLGLTRWSRLATP
Ga0209807_10737932	3300026530	Soil	AGVVFSGVFAGRFGCRRSGTPGGRVKMFDKNLVDAIVGEKDPGGKVLDCGSAELSVNLGLTIDDLTRGHGSLLLDL
Ga0209805_10257524	3300026542	Soil	DRRNGADVVFSGVFAGRFGCRRSGTPGGRVKMFDKNLVDAIVGEKDPGGKVLDCGSAELSVNLGLTIDDLTRRHGSLLLDL
Ga0209805_10681342	3300026542	Soil	PLAADIVHVREDRRNGADVVFSGVFAGRFGCRRSGSPGGRVKMFNKNLVHAIIGEKDPGGKVLDCGSAELSVNLGLTRGHGSLLLDL
Ga0209577_101526141	3300026552	Soil	VRSCKPDPLGADIVHVREDRRNGAGRSVAGRAGRFGSPGGRVKMFDKNLVHAIIGEKDPGGKVLDCGSAELSVNLGLTRGHGSLLLDL
Ga0208990_10063361	3300027663	Forest Soil	LGADIVHVREDRRNRAGLPGRFGSPGGRVKMFDKNLVHAIIGGKDLDCGLAELSVNLVLTRGHGSLLQPIIIPGRRLLGS
Ga0209118_10400586	3300027674	Forest Soil	DRRNGADFAGRFGSPGGRVKMFDKNLVHAIIGGKDLDCGAAELSVNLVLTRSHGSLLRDL
Ga0209773_103682121	3300027829	Bog Forest Soil	VVELSGNLQVRSRKPDPLRTDVVHVREDSRNGAGLAGRLGSPRCRVKLLDQNLVDAIVRGKDLDCRSAELSLNLVLA
Ga0209380_105331501	3300027889	Soil	KPDPLGAGIVHVREDRRNGAGLAGRFGPPGDRVKMFNENLVHPIIGGKDPNRGSAELSVNLGLTRGHGS
Ga0209488_103263142	3300027903	Vadose Zone Soil	IVYVREDRRNGSGLAGRFGSPGGRVKMFDKNLVHALIGGKDLDCGSAQFRVNLPRVNPLSVNLRLTRRHGSLLLDP
Ga0209415_100148535	3300027905	Peatlands Soil	VYVREDRRNGAGLAGRFGSPGGRVKTFDESLVHAIICGKDPDRGSAELSVNLLLTRGHGSLFLDLSYVRAAGLEG
Ga0209168_102069722	3300027986	Surface Soil	AHIVDVREDCHNVSDVAGRFGCPSGRVKMFNENLVDAIIGGKNLDCGSAKLSVNLVLMRGHGSLFLDL
Ga0209526_100508764	3300028047	Forest Soil	DRRNGAGLAGPFGSPGGRVKMFDNKLVHAIIGGEDLDCGSAEVECVNLVLTRAHGSLFLD
Ga0302314_106295371	3300030906	Palsa	MREDRRNGADLAGRFGPPGRFKMFNKNLVHPIIGGKDLESGSAELSVDLVLRRGHGSLLLEL
Ga0310686_1033248295	3300031708	Soil	RSCKPDPLGADIVHVREDRRNGAGVTGRFGWRFGFPGGRVKMFDEKLVHALIGGKDLEGGSAELSVNLVSMRGHGSLLPDL
Ga0310686_1115177093	3300031708	Soil	VHVREDRRNGAGFAGRFGFPGGSVKMFDKNLVHAIIGGKDLDCGSAELSVNLVWTRGHGSLLLDLQYFRAVGFTGHDLQSERRRQNAAD
Ga0307473_104644871	3300031820	Hardwood Forest Soil	MRSCKPDPLAADIVHVREDRRNVADFVLAGRFGSPGGRVKMFDKNLVHAISGGKDLDCGSAELSVNLGLTRGHGSLLLDLTYFRAAKAS
Ga0334854_045301_821_1018	3300033829	Soil	VHVREDRRDAAGLAGRFRSPRGRVKMFDENLVHALVNGKNPPCGSAEFSLNFALMRGHVSLLLDL
Ga0334790_180203_65_262	3300033887	Soil	VHVREDRRNGTGLAGRFGSPGSRVKVFDQDLVHAIVGGKNPDCGSPELSVNLVLTCGHGSLLLHL
Ga0373908_095545_3_218	3300034085	Sediment Slurry	PLGADIVHVREDRRNGAGLAGRFGSPGGRVKMFDKNLVHAIIGGKDLDCGSAELSVNLVLTRGHGSLLLDL
Ga0326724_0135423_18_215	3300034091	Peat Soil	VHVRENRRDGADLAGRFGSPGGWVEMFDKNLVHPIVGGKDPDCGSAELSVNLVWTRGHGSLLLDL
Ga0326724_0574874_357_554	3300034091	Peat Soil	VHVREDRRNAADIARRFGFPGGRVKMFDQHLVHALIGGKDPHCVSARLRVCFVLARGHGSLLLDL
Ga0370483_0303484_158_346	3300034124	Untreated Peat Soil	MDVRENCRNGACLAGRFGFPGVRIKMLDQKLVHVIVGGKDLDCLSAEIGVNLVLTHVAAHTS
Ga0370492_0487004_97_294	3300034282	Untreated Peat Soil	VHVREDRRNGADVARRFGSPGGGVKTFDNNLVYAIIGGEDLDCALTELSVNLVSTRGHGSILLDL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F056382

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences