Metagenome Family F056426

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F056426
Family Type	Metagenome
Number of Sequences	137
Average Sequence Length	48 residues
Representative Sequence	PSREGMEQIVKSLQLLGQFTGRKVAFEEVADARIAREVAKELGYKVD
Number of Associated Samples	122
Number of Associated Scaffolds	137

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	5.84 %
% of genes near scaffold ends (potentially truncated)	91.97 %
% of genes from short scaffolds (< 2000 bps)	91.24 %
Associated GOLD sequencing projects	116
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.350 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (9.489 % of family members)
Environment Ontology (ENVO)	Unclassified (30.657 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (37.226 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 36.00% β-sheet: 0.00% Coil/Unstructured: 64.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 137 Family Scaffolds
PF09084	NMT1	36.50
PF00291	PALP	4.38
PF07883	Cupin_2	2.92
PF03591	AzlC	2.92
PF07331	TctB	2.19
PF00753	Lactamase_B	2.19
PF01494	FAD_binding_3	1.46
PF01970	TctA	1.46
PF03401	TctC	0.73
PF00400	WD40	0.73
PF01627	Hpt	0.73
PF00535	Glycos_transf_2	0.73
PF02615	Ldh_2	0.73
PF02900	LigB	0.73
PF01609	DDE_Tnp_1	0.73
PF04909	Amidohydro_2	0.73
PF07746	LigA	0.73
PF13185	GAF_2	0.73
PF05437	AzlD	0.73

COG ID	Name	Functional Category	% Frequency in 137 Family Scaffolds
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	36.50
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	36.50
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	2.92
COG1296	Predicted branched-chain amino acid permease (azaleucine resistance)	Amino acid transport and metabolism [E]	2.92
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	1.46
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	1.46
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	1.46
COG1784	TctA family transporter	General function prediction only [R]	1.46
COG3333	TctA family transporter	General function prediction only [R]	1.46
COG2055	Malate/lactate/ureidoglycolate dehydrogenase, LDH2 family	Energy production and conversion [C]	0.73
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.73
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.73
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.73
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.73
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.73
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.73
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.73

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.35 %
Unclassified	root	N/A	3.65 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.35 %
Unclassified	root	N/A	3.65 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.35 %
Unclassified	root	N/A	3.65 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	71.53 %
Unclassified	root	N/A	3.65 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.73 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.73 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	63.50 %
Unclassified	root	N/A	3.65 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.73 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.73 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.73 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	63.50 %
Unclassified	root	N/A	3.65 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.73 %
Dehalococcoidia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	0.73 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.73 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	62.77 %
Unclassified	root	N/A	3.65 %
unclassified Dehalococcoidia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia	0.73 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.73 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.73 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	62.77 %
Unclassified	root	N/A	3.65 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	0.73 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.73 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.73 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000655\|AF_2010_repII_A100DRAFT_1101591	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	504	Open in IMG/M
3300000789\|JGI1027J11758_12343464	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	746	Open in IMG/M
3300000891\|JGI10214J12806_13190816	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	615	Open in IMG/M
3300000955\|JGI1027J12803_104500277	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300000956\|JGI10216J12902_100078282	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	550	Open in IMG/M
3300002123\|C687J26634_10078397	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1202	Open in IMG/M
3300003997\|Ga0055466_10033111	All Organisms → cellular organisms → Bacteria	1204	Open in IMG/M
3300003997\|Ga0055466_10227499	Not Available	557	Open in IMG/M
3300004019\|Ga0055439_10059794	All Organisms → cellular organisms → Bacteria	1055	Open in IMG/M
3300005174\|Ga0066680_10641412	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300005178\|Ga0066688_10622292	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	693	Open in IMG/M
3300005180\|Ga0066685_10222244	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1299	Open in IMG/M
3300005332\|Ga0066388_105732527	Not Available	628	Open in IMG/M
3300005335\|Ga0070666_10280432	All Organisms → cellular organisms → Bacteria	1184	Open in IMG/M
3300005451\|Ga0066681_10274486	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1027	Open in IMG/M
3300005467\|Ga0070706_101152473	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	713	Open in IMG/M
3300005471\|Ga0070698_101548114	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	615	Open in IMG/M
3300005535\|Ga0070684_101021063	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	776	Open in IMG/M
3300005563\|Ga0068855_100335443	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1668	Open in IMG/M
3300005713\|Ga0066905_102065908	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	530	Open in IMG/M
3300006049\|Ga0075417_10434349	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300006804\|Ga0079221_10032099	All Organisms → cellular organisms → Bacteria → Proteobacteria	2234	Open in IMG/M
3300006845\|Ga0075421_100901655	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1009	Open in IMG/M
3300006853\|Ga0075420_101511432	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300006871\|Ga0075434_100633127	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1088	Open in IMG/M
3300006880\|Ga0075429_100736450	All Organisms → cellular organisms → Bacteria	863	Open in IMG/M
3300006904\|Ga0075424_100344737	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1587	Open in IMG/M
3300006904\|Ga0075424_102684981	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	520	Open in IMG/M
3300006969\|Ga0075419_10836355	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	661	Open in IMG/M
3300009094\|Ga0111539_10102225	All Organisms → cellular organisms → Bacteria	3364	Open in IMG/M
3300009100\|Ga0075418_12410773	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300009100\|Ga0075418_12708741	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	541	Open in IMG/M
3300009157\|Ga0105092_10016256	All Organisms → cellular organisms → Bacteria	3913	Open in IMG/M
3300009157\|Ga0105092_10297440	All Organisms → cellular organisms → Bacteria	910	Open in IMG/M
3300009162\|Ga0075423_10198649	All Organisms → cellular organisms → Bacteria	2104	Open in IMG/M
3300009167\|Ga0113563_10607985	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1212	Open in IMG/M
3300009168\|Ga0105104_10688253	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300009610\|Ga0105340_1456863	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	571	Open in IMG/M
3300009792\|Ga0126374_10114122	All Organisms → cellular organisms → Bacteria → Proteobacteria	1564	Open in IMG/M
3300009810\|Ga0105088_1050911	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300010047\|Ga0126382_10237104	All Organisms → cellular organisms → Bacteria → Proteobacteria	1326	Open in IMG/M
3300010047\|Ga0126382_11042336	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300010304\|Ga0134088_10370700	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	696	Open in IMG/M
3300010359\|Ga0126376_11219321	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
3300010359\|Ga0126376_12575630	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	557	Open in IMG/M
3300010360\|Ga0126372_12755986	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	543	Open in IMG/M
3300010362\|Ga0126377_10836232	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	981	Open in IMG/M
3300010362\|Ga0126377_12299125	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	615	Open in IMG/M
3300010375\|Ga0105239_13417785	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	516	Open in IMG/M
3300010397\|Ga0134124_10109800	All Organisms → cellular organisms → Bacteria	2412	Open in IMG/M
3300010403\|Ga0134123_12548725	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	578	Open in IMG/M
3300012022\|Ga0120191_10047889	All Organisms → cellular organisms → Bacteria → Proteobacteria	734	Open in IMG/M
3300012174\|Ga0137338_1060306	All Organisms → cellular organisms → Bacteria	810	Open in IMG/M
3300012174\|Ga0137338_1096162	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	651	Open in IMG/M
3300012203\|Ga0137399_11317506	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	607	Open in IMG/M
3300012355\|Ga0137369_11082323	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	525	Open in IMG/M
3300012361\|Ga0137360_10867268	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	778	Open in IMG/M
3300012483\|Ga0157337_1010163	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	723	Open in IMG/M
3300012519\|Ga0157352_1025394	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	750	Open in IMG/M
3300012676\|Ga0137341_1067014	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	599	Open in IMG/M
3300012685\|Ga0137397_10709467	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	747	Open in IMG/M
3300012918\|Ga0137396_10089177	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2185	Open in IMG/M
3300012923\|Ga0137359_10830789	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300012927\|Ga0137416_10020377	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	4224	Open in IMG/M
3300012930\|Ga0137407_10589618	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1043	Open in IMG/M
3300012931\|Ga0153915_11540871	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	777	Open in IMG/M
3300012971\|Ga0126369_13518396	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	513	Open in IMG/M
3300012977\|Ga0134087_10413588	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	660	Open in IMG/M
3300012987\|Ga0164307_11877102	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	508	Open in IMG/M
3300013105\|Ga0157369_11641522	Not Available	653	Open in IMG/M
3300014262\|Ga0075301_1116342	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	593	Open in IMG/M
3300014268\|Ga0075309_1076285	All Organisms → cellular organisms → Bacteria	793	Open in IMG/M
3300014296\|Ga0075344_1021310	All Organisms → cellular organisms → Bacteria	1006	Open in IMG/M
3300014320\|Ga0075342_1198337	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	566	Open in IMG/M
3300014870\|Ga0180080_1089177	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	543	Open in IMG/M
3300014883\|Ga0180086_1113753	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300015262\|Ga0182007_10370612	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	541	Open in IMG/M
3300015371\|Ga0132258_13815064	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1026	Open in IMG/M
3300015372\|Ga0132256_101673790	All Organisms → cellular organisms → Bacteria → Proteobacteria	746	Open in IMG/M
3300015372\|Ga0132256_101987783	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	688	Open in IMG/M
3300015373\|Ga0132257_101746688	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	798	Open in IMG/M
3300015373\|Ga0132257_102386220	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	686	Open in IMG/M
3300015374\|Ga0132255_103047062	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	715	Open in IMG/M
3300016371\|Ga0182034_10077117	All Organisms → cellular organisms → Bacteria → Proteobacteria	2309	Open in IMG/M
3300018052\|Ga0184638_1065274	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1331	Open in IMG/M
3300018071\|Ga0184618_10190917	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	853	Open in IMG/M
3300018072\|Ga0184635_10030047	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2036	Open in IMG/M
3300018076\|Ga0184609_10327481	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	716	Open in IMG/M
3300018076\|Ga0184609_10390634	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	648	Open in IMG/M
3300018077\|Ga0184633_10067593	All Organisms → cellular organisms → Bacteria	1830	Open in IMG/M
3300018078\|Ga0184612_10076915	All Organisms → cellular organisms → Bacteria → Proteobacteria	1741	Open in IMG/M
3300018079\|Ga0184627_10607199	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	549	Open in IMG/M
3300018084\|Ga0184629_10006473	All Organisms → cellular organisms → Bacteria → Proteobacteria	4405	Open in IMG/M
3300018084\|Ga0184629_10085886	All Organisms → cellular organisms → Bacteria	1515	Open in IMG/M
3300018422\|Ga0190265_10415072	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1446	Open in IMG/M
3300018422\|Ga0190265_13105097	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300018433\|Ga0066667_11310594	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	633	Open in IMG/M
3300018469\|Ga0190270_11300933	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	770	Open in IMG/M
3300019377\|Ga0190264_11625742	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	570	Open in IMG/M
3300019881\|Ga0193707_1157343	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	627	Open in IMG/M
3300019882\|Ga0193713_1088172	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	870	Open in IMG/M
3300020006\|Ga0193735_1047029	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1290	Open in IMG/M
3300021178\|Ga0210408_11164446	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	591	Open in IMG/M
3300025002\|Ga0209001_1082848	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	506	Open in IMG/M
3300025164\|Ga0209521_10377257	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	780	Open in IMG/M
3300025167\|Ga0209642_10595490	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	602	Open in IMG/M
3300025174\|Ga0209324_10121973	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1780	Open in IMG/M
3300025289\|Ga0209002_10667250	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	549	Open in IMG/M
3300025318\|Ga0209519_10107445	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1642	Open in IMG/M
3300025326\|Ga0209342_10276482	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1467	Open in IMG/M
3300025558\|Ga0210139_1030635	All Organisms → cellular organisms → Bacteria	1060	Open in IMG/M
3300025910\|Ga0207684_10346793	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1278	Open in IMG/M
3300025910\|Ga0207684_10921865	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	734	Open in IMG/M
3300025917\|Ga0207660_11496186	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	546	Open in IMG/M
3300025922\|Ga0207646_10698965	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	907	Open in IMG/M
3300025923\|Ga0207681_11074161	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	676	Open in IMG/M
3300025930\|Ga0207701_10626147	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	915	Open in IMG/M
3300025937\|Ga0207669_11310577	Not Available	615	Open in IMG/M
3300026075\|Ga0207708_11174123	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	671	Open in IMG/M
3300027163\|Ga0209878_1051435	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300027511\|Ga0209843_1012525	All Organisms → cellular organisms → Bacteria	1755	Open in IMG/M
3300027787\|Ga0209074_10122178	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	906	Open in IMG/M
3300027873\|Ga0209814_10175760	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	922	Open in IMG/M
3300027876\|Ga0209974_10164803	Not Available	806	Open in IMG/M
3300028536\|Ga0137415_10076474	All Organisms → cellular organisms → Bacteria	3207	Open in IMG/M
3300028784\|Ga0307282_10147090	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1114	Open in IMG/M
3300028807\|Ga0307305_10184474	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	961	Open in IMG/M
3300030620\|Ga0302046_11488885	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	524	Open in IMG/M
3300031170\|Ga0307498_10074293	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	987	Open in IMG/M
3300031229\|Ga0299913_10584232	All Organisms → cellular organisms → Bacteria	1100	Open in IMG/M
3300031716\|Ga0310813_10207259	All Organisms → cellular organisms → Bacteria → Proteobacteria	1611	Open in IMG/M
3300031720\|Ga0307469_10947244	All Organisms → cellular organisms → Bacteria	800	Open in IMG/M
3300031720\|Ga0307469_11780585	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	595	Open in IMG/M
3300033433\|Ga0326726_12364766	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	516	Open in IMG/M
3300033551\|Ga0247830_11384921	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	562	Open in IMG/M
3300034164\|Ga0364940_0027306	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1470	Open in IMG/M
3300034417\|Ga0364941_003030	All Organisms → cellular organisms → Bacteria → Proteobacteria	2746	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	79.56%
Host-Associated	Host-Associated	20.44%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	61.31%
Plants	Host-Associated → Plants	20.44%
Aquatic	Environmental → Aquatic	18.25%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	59.12%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.33%
Sediment	Environmental → Aquatic → Sediment	11.68%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.11%
Freshwater	Environmental → Aquatic → Freshwater	3.65%
Marine	Environmental → Aquatic → Marine	2.92%
Floodplain	Environmental → Terrestrial → Floodplain	1.46%
Peat	Environmental → Terrestrial → Peat	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	44.53%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	11.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.68%
Loam	Environmental → Terrestrial → Soil → Loam	9.49%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.65%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.92%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.92%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.19%
Sand	Environmental → Terrestrial → Soil → Sand	2.19%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.19%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.46%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.46%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.66%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	11.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.68%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.30%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.84%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.65%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	2.92%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.92%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.19%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	2.19%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	2.19%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.19%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.46%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.46%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.46%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.46%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.73%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.73%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.49%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	9.49%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	7.30%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.57%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.84%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	4.38%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.65%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	2.92%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	2.92%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.92%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	2.19%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	2.19%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	2.19%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.46%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.46%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.46%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.46%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.46%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.46%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.46%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.46%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.46%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.73%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.73%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	0.73%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.73%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.73%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.73%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.73%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.73%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.73%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.73%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.73%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.73%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.73%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.73%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.73%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002123	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_3	Environmental	Open in IMG/M
3300003997	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D1	Environmental	Open in IMG/M
3300004019	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D2	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009810	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012022	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C6	Environmental	Open in IMG/M
3300012174	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT366_2	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012483	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.4.yng.040610	Host-Associated	Open in IMG/M
3300012519	Unplanted soil (control) microbial communities from North Carolina - M.Soil.7.yng.070610	Environmental	Open in IMG/M
3300012676	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT433_2	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300014262	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D1	Environmental	Open in IMG/M
3300014268	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailA_D1	Environmental	Open in IMG/M
3300014296	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D1	Environmental	Open in IMG/M
3300014320	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqA_D1	Environmental	Open in IMG/M
3300014870	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT560_16_10D	Environmental	Open in IMG/M
3300014883	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT760_16_10D	Environmental	Open in IMG/M
3300015262	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018079	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019881	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2	Environmental	Open in IMG/M
3300019882	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2	Environmental	Open in IMG/M
3300020006	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300025002	Soil microbial communities from Rifle, Colorado, USA - sediment 13ft 2 (SPAdes)	Environmental	Open in IMG/M
3300025164	Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 4	Environmental	Open in IMG/M
3300025167	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 19_2 (SPAdes)	Environmental	Open in IMG/M
3300025174	Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 3	Environmental	Open in IMG/M
3300025289	Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 2	Environmental	Open in IMG/M
3300025318	Soil microbial communities from Rifle, Colorado, USA - sediment 13ft 1	Environmental	Open in IMG/M
3300025326	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_2 (SPAdes)	Environmental	Open in IMG/M
3300025558	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300027163	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_40_50 (SPAdes)	Environmental	Open in IMG/M
3300027511	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027876	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300030620	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034164	Sediment microbial communities from East River floodplain, Colorado, United States - 14_s17	Environmental	Open in IMG/M
3300034417	Sediment microbial communities from East River floodplain, Colorado, United States - 17_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A100DRAFT_11015912	3300000655	Forest Soil	IKSLQMLGQFTGKKIAFDEVADPRIAREVARELGYKVD*
JGI1027J11758_123434642	3300000789	Soil	IEQIVKSLQLLGQFGGRKIAFEDVADAQIAREVAKELGYKIE*
JGI10214J12806_131908163	3300000891	Soil	IVKSLQLLGQFTGKKIPLEEIADVRIAREVAKELGYKID*
JGI1027J12803_1045002771	3300000955	Soil	SGSGVPKREGMEQIVKSLQLTGQFTGKKVGFEEIADARIAAEVAKELGYKVE*
JGI10216J12902_1000782823	3300000956	Soil	GSGVPSREGMEQIVKSLQMLGQFTGKKVAFEEIADARIAREVAKELGYKVD*
C687J26634_100783973	3300002123	Soil	MEQIVKSLQMLGQFAGRKIAFEEIADARIAREVAKELGYKID*
Ga0055466_100331111	3300003997	Natural And Restored Wetlands	GMEQIIKSLQMLGQFTGKKIPMEEVADTKVAREVATELGYKVE*
Ga0055466_102274991	3300003997	Natural And Restored Wetlands	RSAAGNGVPSRAGMEQIVKSLQMLGQFAGKKIPMEEVADTKVAREVAKELGYKVD*
Ga0055439_100597942	3300004019	Natural And Restored Wetlands	MRPQAANAASASREGMEQIVKSLQLLGQFTGRKVAFEEIVDARIAREVAKELGYKVD*
Ga0066680_106414121	3300005174	Soil	REGMEQIVKSLQMLGQFTGKKIAFEEVADARIAREVAKELGYKVD*
Ga0066688_106222921	3300005178	Soil	VKSLQLLGQFVGRNVTFDEIADPRIAREVARELGYKVDL*
Ga0066685_102222441	3300005180	Soil	YQKTVSGNGVPSREGVEQIVKSLQLLGSSAAGIAFEDVADARIAREVAKELGYKVE*
Ga0066388_1057325271	3300005332	Tropical Forest Soil	KTINGSGVPSREGIEQIIRSLQLLGQFPGRKVAFEEVADARIAREVAKELGYNVE*
Ga0070666_102804322	3300005335	Switchgrass Rhizosphere	EGMEQIVKSLQLLGQFTGRKIAFEEITDARIARDVAKELGYKVD*
Ga0066681_102744861	3300005451	Soil	TVSGNGVPSRDGIEQIVKSLQLLGQFTGRKTAFEEVADARISREVAKELGYKVE*
Ga0070706_1011524732	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	SSGSGVPSREGMEQIVKSLQLLGQFTGRKVAFEEIADARIAREVAKELGYKVD*
Ga0070698_1015481142	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	PSREGMEQIVKSLQMLGQFAGKKIPLEEIADTRIAREVAKELGYKID*
Ga0070684_1010210631	3300005535	Corn Rhizosphere	AAAGNGVPSREGMEQIVKSLQMLGQFTGKKIPFEEIADARVSREVAKELGYKID*
Ga0068855_1003354431	3300005563	Corn Rhizosphere	GVPTREGMEQIVKSLQLLGQFTGRKIAFEEITDARIAREVAKELGYKVD*
Ga0066905_1020659081	3300005713	Tropical Forest Soil	QLLGQFTGKKIAFEEVADPRIAREVARELGYKVD*
Ga0075417_104343492	3300006049	Populus Rhizosphere	NRRSASGNGVPSREGIEQIVKSLQMLGQFAGRKIPLEEIADTRIARDVAKELGYKVD*
Ga0079221_100320993	3300006804	Agricultural Soil	MEQIVKSLQLLGQFTGRKIAFEEIADGQIAREVAKELGYKVD*
Ga0075421_1009016551	3300006845	Populus Rhizosphere	SLQLLGQFTGKKIAFEEITDTRIARAVAKELGYKEN*
Ga0075420_1015114321	3300006853	Populus Rhizosphere	SGSGVPSREGMQQIVKSLQLLGQFTGKKVAFEEIADARIAREIAKELGYRVE*
Ga0075434_1006331271	3300006871	Populus Rhizosphere	GNGVPSREGVEQIVKSLQLLGQFGGRKIAFEDVADARIAREVAKELGYKVE*
Ga0075429_1007364501	3300006880	Populus Rhizosphere	SLQLLGQFTGKKVAFEEIADARIAREIAKELGYRVE*
Ga0075424_1003447371	3300006904	Populus Rhizosphere	TVSGNGVPSREGIEQIVKSLQLLGQFGGRKIAFEDVADARIAREVAKELGYKAE*
Ga0075424_1026849811	3300006904	Populus Rhizosphere	VPSREGIEQIVKALQLLGQFSGRKVSFDEVADARIAREVAKELGYKVD*
Ga0075419_108363551	3300006969	Populus Rhizosphere	AEDTFVDYQKTVSGNGVPSREGIEQIVKSLQLLGQFVGRKVGFEEVADARIAREVAKELGYKIE*
Ga0111539_101022254	3300009094	Populus Rhizosphere	EQIVKSLQLLGQFTGRKIAFEEITDARIARDVAKELGYKVD*
Ga0075418_124107731	3300009100	Populus Rhizosphere	QIVKSLQLLGQFTGKKVAFEEIADARIAREIAKELGYRVE*
Ga0075418_127087412	3300009100	Populus Rhizosphere	PSREGIEQIVKSLQLLGQFGGRKIAFEDVADARIAREVAKELGYKVE*
Ga0105092_100162565	3300009157	Freshwater Sediment	PLLGQFTGKKVAFEEVADPRIAREVARELGYRVE*
Ga0105092_102974401	3300009157	Freshwater Sediment	KSLQLLGQFTGKKVGFEEVADPRIASEVAKELGYKVD*
Ga0075423_101986493	3300009162	Populus Rhizosphere	QIVKSLQLLGQFTGKKVAFEEIADARIAREVARELGYKVD*
Ga0113563_106079851	3300009167	Freshwater Wetlands	EQIVKSLQMLGQFTGRKIAFEEIADARIAREVARELGYKID*
Ga0105104_106882531	3300009168	Freshwater Sediment	REGMEQIVKSLQMLGQFTGKKVAFEEVADARIAREVARELGYKVD*
Ga0105340_14568631	3300009610	Soil	GIAQIVKSLQMLGQFTGRKIGFEEVADARIAREVAKELGYKVD*
Ga0126374_101141222	3300009792	Tropical Forest Soil	FEDYRKTSSGSGVPSRKGMEEIIKSLQLLGQFTGKKIAFEEVADPRIAREVARELGYKVD
Ga0105088_10509111	3300009810	Groundwater Sand	MEQIVKSLQMLGQFTGKKVAFEEVADARIAREVARELGYKVD*
Ga0126382_102371041	3300010047	Tropical Forest Soil	SGSGVPSRKGMEEIIKSLQLLGQFTGKKIGFEEVADPRIAREVARELGYKMD*
Ga0126382_110423362	3300010047	Tropical Forest Soil	TSSGSGVPSRKGMEEIIKSLQLLGQFTGKKIAFDEVADPRIAREVARELGYKVD*
Ga0134088_103707001	3300010304	Grasslands Soil	EGIEQIVKSLQLLGQFGGRKIAFDEVADARIAREVAKELGYNVE*
Ga0126376_112193211	3300010359	Tropical Forest Soil	GVPSRKGMEEIIKLLQLLGQFTGKKIAFEEVADPRIAREVARELSYKVD*
Ga0126376_125756302	3300010359	Tropical Forest Soil	RKGMEEIIKSLQMLGQFTGKKIAFEEVADPRIAREVARELGYKVD*
Ga0126372_127559861	3300010360	Tropical Forest Soil	EIIKSLQLLGQFTGKKIAYEEVADPRIAREVARELGYKVD*
Ga0126377_108362321	3300010362	Tropical Forest Soil	KTVSGNGVPSREGVEQIIKSLQLLGQFTGRKITFEEVADARIAREVAKELGYKVEKE*
Ga0126377_122991252	3300010362	Tropical Forest Soil	EDSFEDYRKTSSGSGVPSRKGMEEIIKSLQMLGQFTGKKIAFDEVADPRIAREVARELGYKVD*
Ga0105239_134177851	3300010375	Corn Rhizosphere	KSLQMLGQFTGKKIPFEEITDIRLAREVAKELGYKVD*
Ga0134124_101098001	3300010397	Terrestrial Soil	QIVKSLQLLGQFTGRKIAFEEITDARIAREVAKELGYKVD*
Ga0134123_125487251	3300010403	Terrestrial Soil	LQLLGQFTGKKIPLEEIADVRIAREVAKELGYKID*
Ga0120191_100478892	3300012022	Terrestrial	MEQIVKSLQLLGQFTGKKVAFEEVFDPRIAREVARELGYRVE*
Ga0137338_10603062	3300012174	Soil	TDYQKTSSGSGVPSREGMEQIVKSLQLLGQFTGRKIAFEEIADARIAREVARELGYKIE*
Ga0137338_10961621	3300012174	Soil	TISGNGVPTREGIEQIIKSVQLLGQFPGRKIAFEEVADARIAREVAKELGYKVD*
Ga0137399_113175061	3300012203	Vadose Zone Soil	DYQKTVSGNGVPSPEGIEQIVKSLQLLGQFGGRKIAFEDVADARIAREVAKELGYKVE*
Ga0137369_110823232	3300012355	Vadose Zone Soil	GVPSRDGIEQIVKSLQLLGQFGGRKVAFEDVADARIAREVAKELGYKVE*
Ga0137360_108672682	3300012361	Vadose Zone Soil	EQIVKSLQLLGQFGGRKIAFEDVADARIAREVAKELGYKVE*
Ga0157337_10101631	3300012483	Arabidopsis Rhizosphere	MFADNRRSAAGNGVPSREGMEQIVKSLQLLGQFTGRKIAFEEITDARIARDVAKELGYKVD*
Ga0157352_10253942	3300012519	Unplanted Soil	FVDYQKTVSGNGVPSRDGIEQIVKSLQLLGQFVGRKVGFEEVADARIAREVAKELGYKIE
Ga0137341_10670141	3300012676	Soil	KSVQLLGQFPGRKIAFEEVADARISREVAKELGYKVD*
Ga0137397_107094671	3300012685	Vadose Zone Soil	SGVMPSSVPSRDGIEQIVKSLQLLGQFVGRKVGFEEVADARIAREVAKELGYKNE*
Ga0137396_100891773	3300012918	Vadose Zone Soil	SLQMLGQFAGKKIAFEEITDTRIAREVAKELGYKMD*
Ga0137359_108307892	3300012923	Vadose Zone Soil	PSREGMEQIVKSLQLLGQFTGRKVAFEEVADARIAREVAKELGYKVD*
Ga0137416_100203771	3300012927	Vadose Zone Soil	VPSREGMEQIVKSLQMLGQFAGKKIAFEEITDTRIAREVAKELGYKMD*
Ga0137407_105896182	3300012930	Vadose Zone Soil	EGVEQIVKSLQLLGQFGGRKIAFEDVADARIAREVAKELGYKVE*
Ga0153915_115408712	3300012931	Freshwater Wetlands	GMEQIVKSLQMLGQFAGKKIAFEEIAATLIARDVGKELGYKVE*
Ga0126369_135183962	3300012971	Tropical Forest Soil	PSREGMEQIVKSLQLLGQFVGRKVGFEEIADARIAREVAKELGYKID*
Ga0134087_104135881	3300012977	Grasslands Soil	FIDYQKTVSGNGVPSREGVEQIVKSLQLLGQFGGRKIAFEDVADARIAREVAKELGYKVE
Ga0164307_118771021	3300012987	Soil	SREGMEQIVKSLQLLGQFTGRKIAFEEITDARIARDVAKELGYKVD*
Ga0157369_116415222	3300013105	Corn Rhizosphere	ENRRSAAGNGVPTREGMEQIVKSLQLLGQFTGRKIAFEEITDARIAREVAKELGYKVE*
Ga0075301_11163421	3300014262	Natural And Restored Wetlands	VEKIQMRPQAANAASASREGMEQIVKSLQLLGQFTGRKVAFEEIVDARIAREVAKELGYKVD*
Ga0075309_10762851	3300014268	Natural And Restored Wetlands	IVKSLQMLGQFTGKKIAFEEIADVRIAREVAKELGYKAE*
Ga0075344_10213101	3300014296	Natural And Restored Wetlands	DSYVDYRKTSSGNGVPTREGMEQIVKALQLLGQFTGKKIAFEEIADPRIASEVAKELGYKVE*
Ga0075342_11983371	3300014320	Natural And Restored Wetlands	MEQIVKSLQLLGQFAGRKVAFEEIADARIAKEVARELGYKVD*
Ga0180080_10891771	3300014870	Soil	IEQIIKSVQLLGQFPGRKIAFEEVADARIAREVAKELGYKVD*
Ga0180086_11137532	3300014883	Soil	VPSREGMEQIVKSLQMLGQFTGKKIAFEEIADPRFAREVAKELGYKIN*
Ga0182007_103706121	3300015262	Rhizosphere	KSLQLLGQFTGKKIAFEEIADTRIARAVAKELGYKEN*
Ga0132258_138150641	3300015371	Arabidopsis Rhizosphere	SLQLLGQFGGRKIAFEDVADARIAREVAKELGYKVE*
Ga0132256_1016737902	3300015372	Arabidopsis Rhizosphere	GNGVPSREGMEQIVKSLQLLGQFTGRKIAFEEIADGQIAREVGKELGYKVD*
Ga0132256_1019877833	3300015372	Arabidopsis Rhizosphere	KSLQLLGQFTGRKNAFEEITDARNARDVAKELGYKVD*
Ga0132257_1017466881	3300015373	Arabidopsis Rhizosphere	MFADNRRSASGNGVPSREGMEQIVKSLQMLGQFAGKKIAFEEITDTRIAREVAKELGYKID*
Ga0132257_1023862201	3300015373	Arabidopsis Rhizosphere	MFADNRRSASGNGVPSREGMEQIVKSLQMLGQFAGKKIAFEEITDTRVAREVAKELGYKID*
Ga0132255_1030470621	3300015374	Arabidopsis Rhizosphere	NGVPSREGMEQIVKSLQLLGQFTGRKIAFEEITDTRIARDVAKELGYKVD*
Ga0182034_100771171	3300016371	Soil	SREGMEQIVKALQLLGQFTGRKVAFEEVADARIAREVAKELGYKVD
Ga0184638_10652741	3300018052	Groundwater Sediment	ASGNGVPSREGMEQIVKSLQLLGQFTGKKIAFEEITDTRIAREVAKELGYKLD
Ga0184618_101909172	3300018071	Groundwater Sediment	GNGVPSREGIEQIVKSLQLLGQFGGRKIAFEDVADARIAREVAKELGYKVE
Ga0184635_100300471	3300018072	Groundwater Sediment	AFGEYRKTISGNGVPTREGIEQIIKSVQLLGQFPGRKIAFEEVADARIAREVAKELGYKV
Ga0184609_103274812	3300018076	Groundwater Sediment	VKSLQMLGQFGGRKIAFEDVADARIAREVAKELGYKVE
Ga0184609_103906341	3300018076	Groundwater Sediment	EGIEQIIKSVQLLGQFPGRKIAFEEVADARIAREVAKELGYKVD
Ga0184633_100675933	3300018077	Groundwater Sediment	SLQLLGQFAGRKIPLEEIADTRIAREVAKELDYKID
Ga0184612_100769151	3300018078	Groundwater Sediment	RKTSSGSGVPSREGMEQIVKSLQLLGQFTGKKVAFEEIADARIAREVARELGYKVE
Ga0184627_106071991	3300018079	Groundwater Sediment	GNGVPSREGIEQIVKSLQLLGQFVGRKVAFEEVADARIAREVAKELGYKVE
Ga0184629_100064731	3300018084	Groundwater Sediment	REGIEQIIKSVQLLGQFPGRKIAFEEVADARIAREVAKELGYKVD
Ga0184629_100858861	3300018084	Groundwater Sediment	IIKSVQLLGQFPGRKIAFEEVADARIAREVAKELGYKVD
Ga0190265_104150723	3300018422	Soil	LQLLGQFTGKKIPFDEITDTRIAREVAKELGYKID
Ga0190265_131050972	3300018422	Soil	REGIEQIVKSLQMLGQFTGKKIAFEEIADARFAREVAKELGYKIN
Ga0066667_113105941	3300018433	Grasslands Soil	NGVPSREGMEQIVKSLQMLGQFAGKKIAFEEITDTRIAREVAKELGYKMD
Ga0190270_113009332	3300018469	Soil	FTDYQKTVSGNGVPSREGVEQIVKSLQLLGQFGGRKIAFEDVADARIAREVAKELGYKIE
Ga0190264_116257422	3300019377	Soil	GVPSREGMEQIFKSLQLLGQFTGKKIPFDEITDTRIAREVAKELGYKVD
Ga0193707_11573431	3300019881	Soil	ADNRRSASGNGVPSREGMEQIVKSLQMLGQFAGKKIAFEEITDTRIAREVAKELGYKMD
Ga0193713_10881722	3300019882	Soil	SGNGVPSREGMEQIVKSLQMLGQFAGKKIAFEEITDTRIAREVAKELGYKMD
Ga0193735_10470293	3300020006	Soil	LQMLGQFAGKKIAFEEITDTRIAREVAKELGYKMD
Ga0210408_111644462	3300021178	Soil	SYADYRKTSSGSGVPSREGMEQIVKSLQLLGQFTGRKVAFEEITDPRLAREVAKELGYKV
Ga0209001_10828481	3300025002	Soil	KSLQMLGQFTGKKIAFEEIADVRIAREVAKELGYKAE
Ga0209521_103772572	3300025164	Soil	EGMEQIVKSLQMLGQFAGRKIAFEEIADARIAREVARELGYKID
Ga0209642_105954901	3300025167	Soil	GMEQIVKSLQMLGQFAGRKIAFEEIADARIAREVARELGYKID
Ga0209324_101219731	3300025174	Soil	SGSGVPTREGMEQIVKSLQMLGQFAGRKIAFEEIADARIAREVARELGYKID
Ga0209002_106672502	3300025289	Soil	SLQMLGQFTGKKIAFEEIADVRIAREVAKELGYKAE
Ga0209519_101074451	3300025318	Soil	REGMEQIVKSLQMLGQFAGRKIAFEEIADARIAREVAKELGYKID
Ga0209342_102764823	3300025326	Soil	GVPTREGMEQIVKSLQMLGQFAGRKIAFEEIADARIAREVARELGYKTD
Ga0210139_10306352	3300025558	Natural And Restored Wetlands	MRPQAANAASASREGMEQIVKSLQLLGQFTGRKVAFEEIVDARIAREVAKELGYKVD
Ga0207684_103467931	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	SSGSGVPSREGMEQIVKSLQLLGQFTGRKVAFEEITDSRLAREVAKELGYKVD
Ga0207684_109218651	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	DYRKTSSGSGVPSREGMEQIVKSLQLLGQFTGRKVAFEEIADARIAREVAKELGYKVD
Ga0207660_114961862	3300025917	Corn Rhizosphere	DMFADNRRAAAGNGVPSREGMEQIVKSLQMLGQFTGKKIPFEEIADARVSREVAKELGYKID
Ga0207646_106989652	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	SYADYRKTSSGSGVPSREGMEQIVKSLQLLGQFTGRKVAFEEIADARIAREVAKELGYKV
Ga0207681_110741612	3300025923	Switchgrass Rhizosphere	MFADNRRSASGNGVPSREGMEQIVKSLQMLGQFAGKKIAFEEITDTRIAREVAKELGYKI
Ga0207701_106261472	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	REGMEQIVKSLQMLGQFTGKKIAFEEITDTRVAREVAKELGYKVD
Ga0207669_113105772	3300025937	Miscanthus Rhizosphere	NGVPTREGMEQIVKSLQLLGQFTGRKIAFEEITDARIARDVAKELGYKVD
Ga0207708_111741231	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	ADNEKSSAGNGVPSREGMDQIVKSLQMLGQFTGKKIPFEEITDIRLAREVAKELGYKVD
Ga0209878_10514351	3300027163	Groundwater Sand	SGSGVPTREGMEQIVKSLQMLGQFTGKKVAFEEVADARIAREVARELGYKVD
Ga0209843_10125252	3300027511	Groundwater Sand	MEQIVKSLQMLGQFTGKKVAFEEVADARIAREVARELGYKVD
Ga0209074_101221782	3300027787	Agricultural Soil	AAGNGVPTREGMEQIVKSLQLLGQFTGRKIAFEEITDARIARDVAKELGYKVD
Ga0209814_101757601	3300027873	Populus Rhizosphere	PSREGVEQIVKSLQLLGQFGGRKVAFDEVADARIAREVAKELGYKVE
Ga0209974_101648031	3300027876	Arabidopsis Thaliana Rhizosphere	DEMFAENRRSAAGNGVPTREGMEQIVKSLQLLGQFTGRKIAFEEITDARIAREVAKELGYKVD
Ga0137415_100764741	3300028536	Vadose Zone Soil	VPSREGMEQIVKSLQMLGQFAGKKIAFEEITDTRIAREVAKELGYKMD
Ga0307282_101470902	3300028784	Soil	GNGVPSREGMEQIVKSLQMLGQFAGKKIAFEEITDTRIAREVAKELGYKMD
Ga0307305_101844742	3300028807	Soil	REGMEQIVKSLQMLGQFAGKKIAFEEITDTRIAREVAKELGYKMD
Ga0302046_114888852	3300030620	Soil	ADNRRSAAGNGVPSRAGMEQIVKSLQMLGQFTGKQIAFEEITDPRIAREVAKELGY
Ga0307498_100742931	3300031170	Soil	EMFADNRRSASGNGVPSREGMEQIVKSLQMLGQFSGKKIPFEKITDTRIAREVAKELGYKVD
Ga0299913_105842321	3300031229	Soil	NRRGAAGNGVPSREGIEQIVKSLQMLGQFTGKKIAFEEIADARIAREVAKELGYKAE
Ga0310813_102072591	3300031716	Soil	AAGNGVPSREGMEQIVKSLQLLGQFTGRKIAFEEITDARIARDVAKELGYKVD
Ga0307469_109472441	3300031720	Hardwood Forest Soil	SREGMEQIVKSLQMLGQFTGKKVAFEEIADARIAREVARELGYKVD
Ga0307469_117805852	3300031720	Hardwood Forest Soil	QIVKSLQMLGQFTGKKVAFEEIADARIAREVAKELGYKVD
Ga0326726_123647661	3300033433	Peat Soil	PSYEGIEQIVKSLQSLGQFAGRKVAFEEVADDRLAKEVARELGYKVE
Ga0247830_113849211	3300033551	Soil	GMEQIIKSLQLLGQFTGRKISIDEIADTRIAREVAKELGYKVE
Ga0364940_0027306_1311_1469	3300034164	Sediment	SGSGVPSREGMEQIVKSLQLLGQFTGRKIAFEEIADARIAREVARELGYKID
Ga0364941_003030_2590_2718	3300034417	Sediment	MEQIVKSLQMLGQFTGKKVAFEEIADARIAREVARELGHKVD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F056426

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences