Metagenome / Metatranscriptome Family F056486

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F056486
Family Type	Metagenome / Metatranscriptome
Number of Sequences	137
Average Sequence Length	45 residues
Representative Sequence	MDQRIVETPTEARQGSKYGIVRYVLAISTALVVIAFAVAYMTSV
Number of Associated Samples	112
Number of Associated Scaffolds	137

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	82.84 %
% of genes near scaffold ends (potentially truncated)	27.01 %
% of genes from short scaffolds (< 2000 bps)	85.40 %
Associated GOLD sequencing projects	103
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.49

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (86.131 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (25.547 % of family members)
Environment Ontology (ENVO)	Unclassified (37.226 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (59.854 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 48.61% β-sheet: 0.00% Coil/Unstructured: 51.39%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.49
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.49
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 137 Family Scaffolds
PF03740	PdxJ	13.14
PF04588	HIG_1_N	10.22
PF01923	Cob_adeno_trans	5.84
PF15916	DUF4743	5.11
PF02771	Acyl-CoA_dh_N	2.92
PF00749	tRNA-synt_1c	2.19
PF04255	DUF433	0.73
PF01578	Cytochrom_C_asm	0.73
PF02738	MoCoBD_1	0.73
PF05016	ParE_toxin	0.73
PF13560	HTH_31	0.73
PF12680	SnoaL_2	0.73
PF01464	SLT	0.73
PF05685	Uma2	0.73
PF07969	Amidohydro_3	0.73

COG ID	Name	Functional Category	% Frequency in 137 Family Scaffolds
COG0854	Pyridoxine 5'-phosphate synthase PdxJ	Coenzyme transport and metabolism [H]	13.14
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	2.92
COG0008	Glutamyl- or glutaminyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	2.19
COG2442	Predicted antitoxin component of a toxin-antitoxin system, DUF433 family	Defense mechanisms [V]	0.73
COG4636	Endonuclease, Uma2 family (restriction endonuclease fold)	General function prediction only [R]	0.73

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	86.13 %
Unclassified	root	N/A	13.87 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	86.13 %
Unclassified	root	N/A	13.87 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	86.13 %
Unclassified	root	N/A	13.87 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	84.67 %
Unclassified	root	N/A	13.87 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	72.26 %
Unclassified	root	N/A	13.87 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	36.50 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	26.28 %
Unclassified	root	N/A	13.87 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.73 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	36.50 %
Unclassified	root	N/A	13.87 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	5.84 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	3.65 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	0.73 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.73 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	36.50 %
Unclassified	root	N/A	13.87 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	5.11 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	3.65 %
Skermanella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella	0.73 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	0.73 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.73 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	36.50 %
Unclassified	root	N/A	13.87 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	5.11 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	3.65 %
Skermanella aerolata	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella aerolata	0.73 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	0.73 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.73 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459009\|GA8DASG01E2E16	Not Available	501	Open in IMG/M
2228664022\|INPgaii200_c0704641	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	506	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100653171	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1632	Open in IMG/M
3300001661\|JGI12053J15887_10114810	All Organisms → cellular organisms → Bacteria → Proteobacteria	1445	Open in IMG/M
3300002245\|JGIcombinedJ26739_100853830	Not Available	792	Open in IMG/M
3300002568\|C688J35102_118337647	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	550	Open in IMG/M
3300004081\|Ga0063454_101044485	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	662	Open in IMG/M
3300004114\|Ga0062593_100275195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1413	Open in IMG/M
3300005171\|Ga0066677_10037715	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2353	Open in IMG/M
3300005174\|Ga0066680_10915501	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	519	Open in IMG/M
3300005175\|Ga0066673_10145639	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1314	Open in IMG/M
3300005175\|Ga0066673_10772026	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	551	Open in IMG/M
3300005176\|Ga0066679_10187253	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1314	Open in IMG/M
3300005176\|Ga0066679_10384016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	919	Open in IMG/M
3300005176\|Ga0066679_10630373	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	699	Open in IMG/M
3300005178\|Ga0066688_10130015	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1564	Open in IMG/M
3300005179\|Ga0066684_10708051	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	673	Open in IMG/M
3300005181\|Ga0066678_10750389	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	648	Open in IMG/M
3300005184\|Ga0066671_10246788	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1097	Open in IMG/M
3300005184\|Ga0066671_10828598	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	590	Open in IMG/M
3300005332\|Ga0066388_100902602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1462	Open in IMG/M
3300005344\|Ga0070661_101053907	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	676	Open in IMG/M
3300005435\|Ga0070714_101453603	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	669	Open in IMG/M
3300005445\|Ga0070708_100025619	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	5043	Open in IMG/M
3300005446\|Ga0066686_10950905	Not Available	561	Open in IMG/M
3300005451\|Ga0066681_10437484	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	803	Open in IMG/M
3300005467\|Ga0070706_100308022	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1477	Open in IMG/M
3300005467\|Ga0070706_100768462	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	892	Open in IMG/M
3300005471\|Ga0070698_100085580	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3140	Open in IMG/M
3300005552\|Ga0066701_10749838	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	584	Open in IMG/M
3300005568\|Ga0066703_10052386	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	2288	Open in IMG/M
3300005586\|Ga0066691_10562056	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	680	Open in IMG/M
3300005610\|Ga0070763_10661206	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	609	Open in IMG/M
3300005764\|Ga0066903_101385407	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1320	Open in IMG/M
3300005764\|Ga0066903_103062717	All Organisms → cellular organisms → Bacteria	905	Open in IMG/M
3300005921\|Ga0070766_10152219	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1417	Open in IMG/M
3300006046\|Ga0066652_100216921	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1656	Open in IMG/M
3300006791\|Ga0066653_10317932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	784	Open in IMG/M
3300006794\|Ga0066658_10084666	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1458	Open in IMG/M
3300006796\|Ga0066665_11553244	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	519	Open in IMG/M
3300006806\|Ga0079220_10104569	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1476	Open in IMG/M
3300006893\|Ga0073928_10000419	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	100320	Open in IMG/M
3300006893\|Ga0073928_10001580	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	43039	Open in IMG/M
3300007255\|Ga0099791_10432320	All Organisms → cellular organisms → Bacteria → Proteobacteria	636	Open in IMG/M
3300007788\|Ga0099795_10202942	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	837	Open in IMG/M
3300009038\|Ga0099829_10635767	All Organisms → cellular organisms → Bacteria → Proteobacteria	887	Open in IMG/M
3300009088\|Ga0099830_10366262	Not Available	1161	Open in IMG/M
3300009089\|Ga0099828_10562942	All Organisms → cellular organisms → Bacteria → Proteobacteria	1027	Open in IMG/M
3300009090\|Ga0099827_10088769	All Organisms → cellular organisms → Bacteria → Proteobacteria	2432	Open in IMG/M
3300009090\|Ga0099827_10302404	Not Available	1354	Open in IMG/M
3300009137\|Ga0066709_100001660	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	15060	Open in IMG/M
3300009137\|Ga0066709_102885189	All Organisms → cellular organisms → Bacteria → Proteobacteria	635	Open in IMG/M
3300009143\|Ga0099792_10059569	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1890	Open in IMG/M
3300010159\|Ga0099796_10002297	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	4160	Open in IMG/M
3300010159\|Ga0099796_10205161	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	801	Open in IMG/M
3300010303\|Ga0134082_10195630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	827	Open in IMG/M
3300010321\|Ga0134067_10059411	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1247	Open in IMG/M
3300010321\|Ga0134067_10302231	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	617	Open in IMG/M
3300010359\|Ga0126376_11803582	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	649	Open in IMG/M
3300010364\|Ga0134066_10181808	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	684	Open in IMG/M
3300010366\|Ga0126379_12814156	Not Available	582	Open in IMG/M
3300010373\|Ga0134128_10276120	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1884	Open in IMG/M
3300011269\|Ga0137392_10092101	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2374	Open in IMG/M
3300011271\|Ga0137393_10694205	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	872	Open in IMG/M
3300012189\|Ga0137388_10363705	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1336	Open in IMG/M
3300012198\|Ga0137364_11101255	Not Available	598	Open in IMG/M
3300012199\|Ga0137383_10293693	All Organisms → cellular organisms → Bacteria → Proteobacteria	1190	Open in IMG/M
3300012202\|Ga0137363_10988865	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	714	Open in IMG/M
3300012205\|Ga0137362_10805208	All Organisms → cellular organisms → Bacteria → Proteobacteria	805	Open in IMG/M
3300012207\|Ga0137381_10368956	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1251	Open in IMG/M
3300012210\|Ga0137378_10569151	Not Available	1042	Open in IMG/M
3300012210\|Ga0137378_10808984	All Organisms → cellular organisms → Bacteria → Proteobacteria	849	Open in IMG/M
3300012210\|Ga0137378_11421731	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	606	Open in IMG/M
3300012212\|Ga0150985_111148946	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	744	Open in IMG/M
3300012285\|Ga0137370_10210649	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1142	Open in IMG/M
3300012357\|Ga0137384_10723954	All Organisms → cellular organisms → Bacteria → Proteobacteria	807	Open in IMG/M
3300012361\|Ga0137360_11218329	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella aerolata	651	Open in IMG/M
3300012363\|Ga0137390_10155266	All Organisms → cellular organisms → Bacteria → Proteobacteria	2275	Open in IMG/M
3300012363\|Ga0137390_10788634	All Organisms → cellular organisms → Bacteria → Proteobacteria	908	Open in IMG/M
3300012363\|Ga0137390_11247697	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	690	Open in IMG/M
3300012469\|Ga0150984_105885921	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	569	Open in IMG/M
3300012923\|Ga0137359_10997018	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	719	Open in IMG/M
3300012924\|Ga0137413_10996197	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	657	Open in IMG/M
3300012925\|Ga0137419_10742821	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	799	Open in IMG/M
3300012927\|Ga0137416_11940913	Not Available	539	Open in IMG/M
3300012955\|Ga0164298_10767005	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	685	Open in IMG/M
3300012975\|Ga0134110_10096162	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1194	Open in IMG/M
3300012984\|Ga0164309_10304889	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1150	Open in IMG/M
3300012989\|Ga0164305_10559585	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	911	Open in IMG/M
3300014166\|Ga0134079_10669436	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	525	Open in IMG/M
3300015245\|Ga0137409_10998924	All Organisms → cellular organisms → Bacteria → Proteobacteria	674	Open in IMG/M
3300015357\|Ga0134072_10080128	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	968	Open in IMG/M
3300018431\|Ga0066655_10352816	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	966	Open in IMG/M
3300018431\|Ga0066655_10867585	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	616	Open in IMG/M
3300018433\|Ga0066667_10385025	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1128	Open in IMG/M
3300018433\|Ga0066667_10608915	All Organisms → cellular organisms → Bacteria → Proteobacteria	911	Open in IMG/M
3300018433\|Ga0066667_10903094	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	760	Open in IMG/M
3300018433\|Ga0066667_12249300	Not Available	509	Open in IMG/M
3300018468\|Ga0066662_10703867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	965	Open in IMG/M
3300018468\|Ga0066662_12559753	Not Available	538	Open in IMG/M
3300018482\|Ga0066669_10799037	All Organisms → cellular organisms → Bacteria → Proteobacteria	835	Open in IMG/M
3300018482\|Ga0066669_12115450	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	531	Open in IMG/M
3300020199\|Ga0179592_10295991	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	720	Open in IMG/M
3300021086\|Ga0179596_10711946	All Organisms → cellular organisms → Bacteria → Proteobacteria	508	Open in IMG/M
3300021170\|Ga0210400_10003731	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	13400	Open in IMG/M
3300021178\|Ga0210408_10878922	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	699	Open in IMG/M
3300021374\|Ga0213881_10568135	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	516	Open in IMG/M
3300021432\|Ga0210384_10052297	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	3706	Open in IMG/M
3300021560\|Ga0126371_10276288	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1801	Open in IMG/M
3300022557\|Ga0212123_10000086	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	312382	Open in IMG/M
3300022557\|Ga0212123_10000744	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	100375	Open in IMG/M
3300025922\|Ga0207646_10212496	Not Available	1747	Open in IMG/M
3300025939\|Ga0207665_10096523	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2056	Open in IMG/M
3300026301\|Ga0209238_1113681	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	902	Open in IMG/M
3300026301\|Ga0209238_1169635	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	646	Open in IMG/M
3300026309\|Ga0209055_1282337	Not Available	519	Open in IMG/M
3300026312\|Ga0209153_1047359	Not Available	1516	Open in IMG/M
3300026318\|Ga0209471_1317036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	516	Open in IMG/M
3300026325\|Ga0209152_10231588	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	689	Open in IMG/M
3300026335\|Ga0209804_1303616	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	543	Open in IMG/M
3300026538\|Ga0209056_10351170	All Organisms → cellular organisms → Bacteria	968	Open in IMG/M
3300026547\|Ga0209156_10241563	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	843	Open in IMG/M
3300026550\|Ga0209474_10247696	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1100	Open in IMG/M
3300026551\|Ga0209648_10124967	Not Available	2069	Open in IMG/M
3300027633\|Ga0208988_1102481	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	709	Open in IMG/M
3300027889\|Ga0209380_10072245	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1972	Open in IMG/M
3300027903\|Ga0209488_10200578	All Organisms → cellular organisms → Bacteria → Proteobacteria	1503	Open in IMG/M
3300028047\|Ga0209526_10828421	Not Available	570	Open in IMG/M
3300028906\|Ga0308309_10348398	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1262	Open in IMG/M
3300028906\|Ga0308309_11877889	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	505	Open in IMG/M
3300031058\|Ga0308189_10245599	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	673	Open in IMG/M
3300031091\|Ga0308201_10385648	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	523	Open in IMG/M
3300031720\|Ga0307469_10931750	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	807	Open in IMG/M
3300032174\|Ga0307470_10590282	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	829	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.81%
Host-Associated	Host-Associated	2.19%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.89%
Aquatic	Environmental → Aquatic	2.92%
Plants	Host-Associated → Plants	2.19%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.16%
Thermal Springs	Environmental → Aquatic → Thermal Springs	2.92%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.46%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.73%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	76.64%
Loam	Environmental → Terrestrial → Soil → Loam	17.52%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	2.92%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.46%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	39.42%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	32.12%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.11%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.65%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	3.65%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	2.92%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.46%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.46%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	25.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	20.44%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	10.95%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	5.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.38%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.38%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	3.65%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.65%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	2.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.19%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.19%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.19%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.46%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.46%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.73%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.73%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.73%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.73%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.73%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.73%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.73%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.73%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459009	Grass soil microbial communities from Rothamsted Park, UK - July 2009 indirect DNA Tissue lysis 0-10cm	Environmental	Open in IMG/M
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005532	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021374	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027633	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027773	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031091	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F47_00353250	2170459009	Grass Soil	MEAAMDQRIVQTPTEARQGSKSGIVRYVLTISTALVVIAFAVAYITSV
INPgaii200_07046412	2228664022	Soil	MMEAAMDQRIVQSPTEARQGSKNGIVRYVLAISTALVVIAFAVAYITSV
INPhiseqgaiiFebDRAFT_1006531713	3300000364	Soil	MDQRIVQSPTEARQGSKNGIVRYVLAISTALVVIAFAVAYITSV*
JGI12053J15887_101148103	3300001661	Forest Soil	MDQRIVQSPTKARQGSKYGIVRYVLAISTALVVIGFAVAYMTSV*
JGIcombinedJ26739_1008538301	3300002245	Forest Soil	TPTEARQGSKSGIVRYVLAISTALVVIAFAVAYITSV*
C688J35102_1183376471	3300002568	Soil	MEAAMDDGRRIVESPSRARQASKPGIVRYVLAISLALVVIAFAVAYMTSV*SGGLHELGSPGAR
Ga0063454_1010444851	3300004081	Soil	MDDGRRIVESPSRARQASKPGIVRYVLAISLALVVIAFAVAYMTSV*
Ga0062593_1002751952	3300004114	Soil	MDDGRRIVESPSRARQASKYGIVRYVLAISLALVVIAFAVAYMTSV*
Ga0066677_100377154	3300005171	Soil	MDDGRRIVESPSRARQANKPGIVRYVLAISLALVVIAFAVAYMTSV*
Ga0066680_109155012	3300005174	Soil	MDQRIVETPNQARQGRKYGIVRYVLLISTVLVVIAFAVAYMTSV*
Ga0066673_101456391	3300005175	Soil	MDDGRRIVESPSRARQASKPGIVRYVLAISLALVVIGFAVAYMTSV*
Ga0066673_107720262	3300005175	Soil	MDQRIDPRIVETPTEARQGSKYGIVRYVLAISTALVVIAFAVAYMTSV*
Ga0066679_101872531	3300005176	Soil	MDQRIVESPNQARAGRKYGVLRYVLLISTLLVVIAFAVAYTLSV*
Ga0066679_103840164	3300005176	Soil	RRIVESPSRARQASKPGIVRYVLAISLALVVIAFAVAYMSSV*
Ga0066679_106303731	3300005176	Soil	MDQRIVQSPTEARQGSKYGIVRYVLAISTALVVIGFAVAYMTSV*
Ga0066688_101300153	3300005178	Soil	MDQRWDHRIVETPTEARQGSKYGIVRYVLAISTALVVIAFAVAYMTSV*
Ga0066684_107080511	3300005179	Soil	MDDGRRIVESPSRARQASKPGIVRYVLAISLALVVIAFAVAYM
Ga0066678_107503891	3300005181	Soil	MDQRIVQSPTKARQGRKYGIVRYVLLISTLLVVIAFAVAYTLTV*
Ga0066671_102467882	3300005184	Soil	MDDGRRIVESPSRARQANKPGIVRYVLAISLALVVIAFAVAYMSAV*
Ga0066671_108285981	3300005184	Soil	IVESPTRARQGGKYGIVRYVLVISTVLVVIAFAVAYIASV*
Ga0066388_1009026022	3300005332	Tropical Forest Soil	MDDGRRIVESPTRARQAGKYGIVRYVLAISLVLVVIAFAVAYMTSV*
Ga0070661_1010539071	3300005344	Corn Rhizosphere	MDDGRRIVESPSRARQASKYGVVRYVLAISLVLVVIAFAVAYMTSV*
Ga0070714_1014536031	3300005435	Agricultural Soil	MDDGRRIVESPSRARQASKYGIVRYVLAISLVLVVIAFAVAYMTSV*
Ga0070708_1000256195	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MDQRIVQSPTEARQGSKYGIVRYVLAISTALVVIAFAVAYITSV*
Ga0066686_109509052	3300005446	Soil	MDQDQRVVETPERARSARKYGVLRYILGISLVLVVIAFAVAYVTSV*
Ga0066681_104374842	3300005451	Soil	MDQDQRVVETPERARSARKHGVLRYILGISLVLVVIAFAVAYVTSV*
Ga0070706_1003080223	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MEAAMDQRIVQSPTEARQGSKYGIVRYVLAISTALVVIAFA
Ga0070706_1007684621	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	IVQSPTEARQGSKYGIVRYVLAISTALVVIAFAVAYITSV*
Ga0070698_1000855804	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MDQRIVQSPTEARQGSKYGIVRYVLAISTALVVIAFAAAYITSV*
Ga0070739_100597543	3300005532	Surface Soil	MPQRIVEDPTSARAGTKSGIVRYILAVSVALVVIAFIVAYFVTI*
Ga0066701_107498382	3300005552	Soil	MDQRIVETPERARSARKYGVLRYILGISLVLVVIAFAVAYVISV*
Ga0066703_100523865	3300005568	Soil	MDDGRRIVESPSRARQASKPGIVRYVLAISLALVVIAFAVAYMSSV*
Ga0066691_105620562	3300005586	Soil	MDQRIVETPTEARQGSKYGIVRYVLAISTALVVIAFAVAYMTSV*
Ga0070763_106612063	3300005610	Soil	SPNQVRQGGKFGVVRYVLLISTLLVVIAFAVAYTLSV*
Ga0066903_1013854074	3300005764	Tropical Forest Soil	RIVESPTRARQAGKYGVVRYVLAISLLLVVIAFAVAYMTSV*
Ga0066903_1030627173	3300005764	Tropical Forest Soil	MAQRIVQSPTKARQGSKYGIVRYVLAISVVLVVIAFAVAYMTSV*
Ga0070766_101522192	3300005921	Soil	MDQRIVLSPNQVRQGGKFGVVRYVLLISTLLVVIAFAVAYTLSV*
Ga0066652_1002169213	3300006046	Soil	MDQRIVETPTAARQGSKYGIVRYVLAISTALVVIAFAVAYMTSV*
Ga0066653_103179322	3300006791	Soil	MDQRIVETPTAARQGSKYGIVRYVLAISTALVVIAFAVAYITSV*
Ga0066658_100846663	3300006794	Soil	MDDGRRIVESPSRARQANKPGIVRYVLAISLALVVIAFAVAYMSSV*
Ga0066665_115532441	3300006796	Soil	ERGRATTEAAMDDGRRIVESPSRARQANKPGIVRYVLAISLALVVIAFAVAYMTSV*
Ga0079220_101045693	3300006806	Agricultural Soil	MDDGRRIVESPSRARQASKYGIVRYVLAISLVLVVIAFAVAY
Ga0073928_1000041921	3300006893	Iron-Sulfur Acid Spring	MDQNIVSTPERARGARKAGVVRYVLAVSLLLVVIAFAVAYVTSV*
Ga0073928_1000158013	3300006893	Iron-Sulfur Acid Spring	MDQRIDQPIGQRIVQDPTRARQGSKPGIVRYVLVISTLLVVIAFAVAYMTSV*
Ga0099791_104323202	3300007255	Vadose Zone Soil	VDQRIVETPERTHAARKYGVLRYILGISLVLVVIAFAVAYVISV*
Ga0099795_102029421	3300007788	Vadose Zone Soil	MEAAMDQRIVQSPTKARQGSKYGIVRYVLAISTALVVIGFAVAYMTSV*
Ga0099829_106357672	3300009038	Vadose Zone Soil	MDQRIVLSPEKARAARKYGVLRYILGISLVLVVIAFAVAYVISV*
Ga0099830_103662621	3300009088	Vadose Zone Soil	PTRQLVDQRIVETPERTHAARKYGVLRYILGISLVLVVIAFAVAYVISV*
Ga0099828_105629422	3300009089	Vadose Zone Soil	MDQRIVETLESARAARKYGVLRYILGISLVLVVIAFAVAYVISV*
Ga0099827_100887691	3300009090	Vadose Zone Soil	MDQRIVETPERARAARKCGVLRYILEVIRELVVIAFAVAYVT
Ga0099827_103024041	3300009090	Vadose Zone Soil	RRAPPARQALDQRIVETPEKARAARKYGVLRYILGISLVLVVIAFAVAYVISV*
Ga0066709_10000166011	3300009137	Grasslands Soil	MEAAMDQRWDHRIVETPTEARQGSKYGIVRYVLAISTALVVIAFAVAYITSV*
Ga0066709_1028851891	3300009137	Grasslands Soil	MDQRIVETPERTRAARKYGVLRYILGISLVLVVIAFAVAYVISV*
Ga0099792_100595694	3300009143	Vadose Zone Soil	MEAAMDQRIVETPTAARQGSKYGIVRYVLAISTALVVIAFAVAYITSV*
Ga0099796_100022975	3300010159	Vadose Zone Soil	MEAAMDDGRRIVESPSRARQASKPGIVRYVLAISLALVVIAFAVAYMTSV*
Ga0099796_102051612	3300010159	Vadose Zone Soil	MEAAMDQRIVQSPTEARQGSKYGIVRYVLAISTALVVIGFAVAYMTSV*
Ga0134082_101956301	3300010303	Grasslands Soil	MDDGRRIVESPSRARQASKPGIVRYVLAISLALVVIAFAVAYMTFV*
Ga0134067_100594111	3300010321	Grasslands Soil	MEAAMDDGRRIVESPSRARQASKPGIVRYVLAISLALVVIAFAVAYMSAV*
Ga0134067_103022311	3300010321	Grasslands Soil	MDQRIDPRIVETPTEVRQGSKYGIVRYVLAISTALVVIAFAVAYITSV*
Ga0126376_118035822	3300010359	Tropical Forest Soil	MDDGRRIVESPTRARQAGKYGVVRYVLAISLLLVVIAFAVAYMTSV*
Ga0134066_101818081	3300010364	Grasslands Soil	MDDGRRIVESPSRARQANKPGIVRYVLAISLALVVI
Ga0126379_128141562	3300010366	Tropical Forest Soil	MDDGRRIVESPTRARGARVYGIVRYVLVISTVLVVIAFAVAYMTSV*
Ga0134128_102761203	3300010373	Terrestrial Soil	MNDGRRIVESPSRARQASKYGIVRYVLAISLVLVVIAFAVAYMTSV*
Ga0137392_100921015	3300011269	Vadose Zone Soil	MDQRIVETPERARAARKNGVLRYILGISLVLVVIAFAVAYVISV*
Ga0137393_106942051	3300011271	Vadose Zone Soil	RTRAARKYGVLRYILGISLVLVVIAFAVAYVISV*
Ga0137388_103637051	3300012189	Vadose Zone Soil	MDQRIVLSPEKTRAARKYGVLRYILGISLVLVVIAFAVAYVIS
Ga0137364_111012551	3300012198	Vadose Zone Soil	MDQRIVETPTEARQGSKYGIVRYVLAISTALVVIAFAVAYITSV*
Ga0137383_102936932	3300012199	Vadose Zone Soil	MDQDQRVVETPERARSARKYGVLRYILRISLVLGVIAFAVAYVTSV*
Ga0137363_109888652	3300012202	Vadose Zone Soil	MEAAMDQRIVQSPTKARQGSKYGIVRYVLAISTALVVIAFAVAYMTSV*
Ga0137362_108052082	3300012205	Vadose Zone Soil	MDQRIVETPEKARAAREYGVLRYILGISLVLVVIAFAVAYVISV*
Ga0137381_103689563	3300012207	Vadose Zone Soil	MDQRIVASPEKARAARKYGVVRYILVISLVLVVIAFAVAYVTSV*
Ga0137378_105691513	3300012210	Vadose Zone Soil	MDQRIVETPEGTRAARKYGVLRYILGLSLVLVVIAFAVAYVISV*
Ga0137378_108089843	3300012210	Vadose Zone Soil	MDQRIVASPEKARAARKYGVVRYILGISLVLVVIAFAVAYVTSV*
Ga0137378_114217312	3300012210	Vadose Zone Soil	MDQRIVETPERARSARKYGVLRYILGISLVLVVIAFAVAYVTSV*
Ga0150985_1111489461	3300012212	Avena Fatua Rhizosphere	TTEAAMDDGRRIVESPSRARQASKPGIVRYVLAISLALVVIAFAVAYMTSV*
Ga0137370_102106493	3300012285	Vadose Zone Soil	MMEALMDQRIVETPTEARQGSKYGIVRYVLAISTALVVIAFAVAYITSV*
Ga0137384_107239542	3300012357	Vadose Zone Soil	MDQHIVASPEKARAARKYGVVRYILGISLVLVVIAFAVAYVTSV*
Ga0137360_112183291	3300012361	Vadose Zone Soil	MDQRIVESPEQARQGRKYGVMRYVLLISTLLVVIAFAVAYTLSV*
Ga0137390_101552661	3300012363	Vadose Zone Soil	MDQRIVETPEKARAARKYGVLRYILGISLVLVVIAFAVA
Ga0137390_107886341	3300012363	Vadose Zone Soil	MDQRIVETPERARSARKYGVLRYILGISLVLVVILFAVAY
Ga0137390_112476971	3300012363	Vadose Zone Soil	MDQRVVETPERARSARKYGVLRYILGISLVLVVIAFAVAYVISV*
Ga0150984_1058859213	3300012469	Avena Fatua Rhizosphere	VLFRSEVPHMAQRIAEGPERARQGRPEHVVRYVLILSTLLVVILFAVAYTLSV*
Ga0137359_109970182	3300012923	Vadose Zone Soil	MDQRVVETPERARSARKYGVLRYILGISLVLVVIAFAVAYVTSV*
Ga0137413_109961971	3300012924	Vadose Zone Soil	MEAAMDQRIVQSPTEARQGSKYGIVRYVLAISTALVVIAFAVAYMTSV*
Ga0137419_107428211	3300012925	Vadose Zone Soil	AMDQRIVQSPTEARQGSKYGIVRYVLAISTALVVIGFAVAYMTSV*
Ga0137416_119409131	3300012927	Vadose Zone Soil	MEAAMDQRIVQSPTKARQGSKYGIVRYVLAISTALV
Ga0164298_107670051	3300012955	Soil	MDDGRRIGESPSRARQASKYGIVRYVLAISLVLVVIAFAVAYMTSV*
Ga0134110_100961622	3300012975	Grasslands Soil	MEALMDQRIVETPTAARQGSKYGIVRYVLAISTALVVIAFAVAYITSV*
Ga0164309_103048893	3300012984	Soil	MDDGRRIVESPSRVRQASKYGIVRYVLAISLVLVVIAFAVAYMTSV*
Ga0164305_105595854	3300012989	Soil	IVESPSRARQGSKPGIVRYVLAISLALVVIAFAVAYMTSV*
Ga0134079_106694362	3300014166	Grasslands Soil	MDQRIVETPTAARQGSKYGIVRYVLAISTALVVIAFAV
Ga0137409_109989242	3300015245	Vadose Zone Soil	MDQRIVASPEKARAARKYGVVRYILGISLVLVVIAFAVAYVISV*
Ga0134072_100801282	3300015357	Grasslands Soil	MEAAMDDGRRIVESPSRARQASKPGIVRYVLAISLALVVIGFAVAYMTSV*
Ga0066655_103528161	3300018431	Grasslands Soil	MDDGRRIVESPSRARQANKPGIVRYVLAISLALVVIAFAVAYMTSV
Ga0066655_108675852	3300018431	Grasslands Soil	MDQRIVETPTAARQGSKYGIVRYVLAISTALVVIAFAVAYMTSV
Ga0066667_103850253	3300018433	Grasslands Soil	MDQRIDPRIVETPTEARQGSKYGIVRYVLAISTALVVIAFAVAYMTSV
Ga0066667_106089151	3300018433	Grasslands Soil	MDQDQRIVETPERARSARKYGVLRYILGISLVLVVIAFAVAYVTSV
Ga0066667_109030943	3300018433	Grasslands Soil	MDDGRRIVESPSRARQASKPGIVRYVLAISLALVVIGFAVAYMTSV
Ga0066667_122493001	3300018433	Grasslands Soil	MDQRIVETPTAARQGSKYGIVRYVLAISTALVVIAF
Ga0066662_107038673	3300018468	Grasslands Soil	MDDGRRIVESPSRARQASKPGIVRYVLAISLALVVIAFAVAYMTFV
Ga0066662_125597532	3300018468	Grasslands Soil	MDDGRRIVESPSRARQASKPGIVRYVLAISLALVVIAFAVAYMTSV
Ga0066669_107990371	3300018482	Grasslands Soil	RIVESPSRARQASKPGIVRYVLAISLALVVIAFAVAYMSSV
Ga0066669_121154501	3300018482	Grasslands Soil	MDQRIVETPTEARQGSKYGIVRYVLAISTALVVIAFA
Ga0179592_102959913	3300020199	Vadose Zone Soil	MDQRIVQSPTEARQGSKYGIVRYVLAISTALVVIGFAVAYMTSV
Ga0179596_107119461	3300021086	Vadose Zone Soil	MDQRIVLSPEKARAARKYGVLRYILGISLVLVVIAFAVAYVISV
Ga0210400_1000373110	3300021170	Soil	MDQRIVQTPTEARQGSKYGIVRYVLAISTALVVIGFAVAYITSV
Ga0210408_108789222	3300021178	Soil	MDQRIVQTPTEARQGSKPGIVRYVLAISTALVVIAFAVAYITSV
Ga0213881_105681351	3300021374	Exposed Rock	MDDGRRVVETPTEARAGSKSGVARYVLAISLALVVIAFAVAYITSV
Ga0210384_100522976	3300021432	Soil	MDQRIVLSPNQVRQGRKFGVVRYVLLISTLLVVIAFAVAYTLSV
Ga0126371_102762881	3300021560	Tropical Forest Soil	MDDGRRIVESPTRARQAGKYGVVRYVLAISLLLVVIAFAVAYMTSV
Ga0212123_10000086323	3300022557	Iron-Sulfur Acid Spring	MDQRIDQPIGQRIVQDPTRARQGSKPGIVRYVLVISTLLVVIAFAVAYMTSV
Ga0212123_1000074477	3300022557	Iron-Sulfur Acid Spring	MDQNIVSTPERARGARKAGVVRYVLAVSLLLVVIAFAVAYVTSV
Ga0207646_102124964	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MDQRIVQSPTEARQGSKYGIVRYVLAISTALVVIAFAVAYITSV
Ga0207665_100965233	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MDDGRRIVESPSRARQASKYGIVRYVLEISLVLVVIAFAVAYMTSV
Ga0209238_11136814	3300026301	Grasslands Soil	DGRRIVESPSRARQASKPGIVRYVLAISLALVVIAFAVAYMTSV
Ga0209238_11696351	3300026301	Grasslands Soil	MDDGRRIVESPSRARQASKPGIVRYVLAISLALVVIAFAVAYMSSV
Ga0209055_12823371	3300026309	Soil	MDDGRRIVESPSRARQASKPGIVRYVLAISLALVVIAFAVAYITSV
Ga0209153_10473593	3300026312	Soil	MDDGRRIVESPSRARQANKPGIVRYVLAISLALVVIAFAVAYMSAV
Ga0209471_13170361	3300026318	Soil	MDQRIVESPNQARAGRKYGVLRYVLLISTLLVVIAFAVAYTLSV
Ga0209152_102315883	3300026325	Soil	MDDGRRIVESPSRARQASKYGIVRYVLAISLALVVIAFAVAYMTSV
Ga0209804_13036162	3300026335	Soil	RIVESPSRARQASKPGIVRYVLAISLALVVIAFAVAYMTSV
Ga0209056_103511701	3300026538	Soil	MDQDQRVVETPERARSARKYGVLRYILGISLVLVVIAFAVAYVTSV
Ga0209156_102415633	3300026547	Soil	MDQRIVETPTAARQGSKYGIVRYVLAISTALVVIAFAVAY
Ga0209474_102476963	3300026550	Soil	MDQRIVETPTEARQGSKYGIVRYVLAISTALVVIAFAVAYITSV
Ga0209648_101249673	3300026551	Grasslands Soil	MDQRIVETPERARAARKNGVLRYILGISLVLVVIAFAVAYVISV
Ga0208988_11024811	3300027633	Forest Soil	MDQRIVQSPTKARQGSKYGIVRYVLAISTALVVIGFAVAYMTSV
Ga0209810_10006148	3300027773	Surface Soil	MPQRIVEDPTSARAGTKSGIVRYILAVSVALVVIAFIVAYFVTI
Ga0209380_100722454	3300027889	Soil	MDQRIVLSPNQVRQGGKFGVVRYVLLISTLLVVIAFAVAYTLSV
Ga0209488_102005782	3300027903	Vadose Zone Soil	MDRRIVLSPEKARAARKYGVLRYILGISLVLVVIAFAVAYVISV
Ga0209526_108284211	3300028047	Forest Soil	MDQRIVQTPTEARQGSKSGIVRYVLAISTALVVIAFAVAYITSV
Ga0308309_103483984	3300028906	Soil	SLGNIEGAIMDQRIVLSPNQVRQGGKFGVVRYVLLISTLLVVIAFAVAYTLSV
Ga0308309_118778892	3300028906	Soil	VERRVVESPQQARSAQKPGIVRYVLAVSLVLVVILFLVAYTI
Ga0308189_102455991	3300031058	Soil	ATTEAAMDDGRRIVESPSRARQASKPGIVRYVLAISLALVVIAFAVAYMTSV
Ga0308189_105040502	3300031058	Soil	RMEAAMDQRWDDQRIDQRIVETPTEARQGSKYGIVRYVLAISTALVVIAFAVAYMTSV
Ga0308201_103856482	3300031091	Soil	RRIDESPSRARQASKPGIVRYVVAISLALVVIAFAVAYMTSV
Ga0307469_109317502	3300031720	Hardwood Forest Soil	MDQRIVQSPTEARQGSKNGIVRYVLAISTALVVIAFAVAYITSV
Ga0307470_105902822	3300032174	Hardwood Forest Soil	MDQRIVQSPTEARQGSKNGIVRYVLAISTALVVIAFAVAYMTSV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F056486

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences