Metagenome / Metatranscriptome Family F056560

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F056560
Family Type	Metagenome / Metatranscriptome
Number of Sequences	137
Average Sequence Length	54 residues
Representative Sequence	MESKVAKEAERALVEATQRLSPEERLNAFLAHCRLVMELYEAGQKARSQAAQPQP
Number of Associated Samples	119
Number of Associated Scaffolds	137

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	18.98 %
% of genes near scaffold ends (potentially truncated)	23.36 %
% of genes from short scaffolds (< 2000 bps)	73.72 %
Associated GOLD sequencing projects	100
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.60

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (83.942 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (16.058 % of family members)
Environment Ontology (ENVO)	Unclassified (29.197 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (40.146 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.22% β-sheet: 0.00% Coil/Unstructured: 45.78%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.60
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.60
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 137 Family Scaffolds
PF01625	PMSR	4.38
PF07992	Pyr_redox_2	2.92
PF06123	CreD	1.46
PF00012	HSP70	1.46
PF00919	UPF0004	1.46
PF00654	Voltage_CLC	1.46
PF01381	HTH_3	1.46
PF00881	Nitroreductase	1.46
PF07690	MFS_1	1.46
PF04366	Ysc84	1.46
PF05960	DUF885	1.46
PF00891	Methyltransf_2	0.73
PF00501	AMP-binding	0.73
PF13418	Kelch_4	0.73
PF14833	NAD_binding_11	0.73
PF00293	NUDIX	0.73
PF00583	Acetyltransf_1	0.73
PF00732	GMC_oxred_N	0.73
PF04267	SoxD	0.73
PF13472	Lipase_GDSL_2	0.73
PF04024	PspC	0.73
PF01738	DLH	0.73
PF02561	FliS	0.73
PF14344	DUF4397	0.73
PF00135	COesterase	0.73
PF09836	DUF2063	0.73
PF07715	Plug	0.73
PF08388	GIIM	0.73
PF01431	Peptidase_M13	0.73
PF12706	Lactamase_B_2	0.73
PF11965	DUF3479	0.73
PF01850	PIN	0.73
PF05013	FGase	0.73
PF13769	Virulence_fact	0.73
PF07196	Flagellin_IN	0.73
PF13560	HTH_31	0.73
PF08002	DUF1697	0.73
PF02452	PemK_toxin	0.73
PF07589	PEP-CTERM	0.73
PF00990	GGDEF	0.73
PF10162	G8	0.73
PF08298	AAA_PrkA	0.73
PF14602	Hexapep_2	0.73
PF10387	DUF2442	0.73
PF02518	HATPase_c	0.73
PF01934	HepT-like	0.73
PF12704	MacB_PCD	0.73
PF06253	MTTB	0.73
PF07883	Cupin_2	0.73
PF07477	Glyco_hydro_67C	0.73
PF01988	VIT1	0.73
PF13767	DUF4168	0.73
PF04014	MazE_antitoxin	0.73
PF03458	Gly_transporter	0.73
PF02774	Semialdhyde_dhC	0.73
PF13411	MerR_1	0.73
PF00669	Flagellin_N	0.73
PF02609	Exonuc_VII_S	0.73

COG ID	Name	Functional Category	% Frequency in 137 Family Scaffolds
COG0225	Peptide methionine sulfoxide reductase MsrA	Posttranslational modification, protein turnover, chaperones [O]	4.38
COG1516	Flagellin-specific chaperone FliS	Cell motility [N]	2.19
COG0038	H+/Cl- antiporter ClcA	Inorganic ion transport and metabolism [P]	1.46
COG0443	Molecular chaperone DnaK (HSP70)	Posttranslational modification, protein turnover, chaperones [O]	1.46
COG0621	tRNA A37 methylthiotransferase MiaB	Translation, ribosomal structure and biogenesis [J]	1.46
COG1344	Flagellin and related hook-associated protein FlgL	Cell motility [N]	1.46
COG2930	Lipid-binding SYLF domain, Ysc84/FYVE family	Lipid transport and metabolism [I]	1.46
COG4452	Inner membrane protein CreD involved in colicin E2 resistance	Defense mechanisms [V]	1.46
COG4805	Uncharacterized conserved protein, DUF885 family	Function unknown [S]	1.46
COG0002	N-acetyl-gamma-glutamylphosphate reductase	Amino acid transport and metabolism [E]	0.73
COG0136	Aspartate-semialdehyde dehydrogenase	Amino acid transport and metabolism [E]	0.73
COG1256	Flagellar hook-associated protein FlgK	Cell motility [N]	0.73
COG1345	Flagellar capping protein FliD	Cell motility [N]	0.73
COG1633	Rubrerythrin, includes spore coat protein YhjR	Inorganic ion transport and metabolism [P]	0.73
COG1722	Exonuclease VII small subunit	Replication, recombination and repair [L]	0.73
COG1814	Predicted Fe2+/Mn2+ transporter, VIT1/CCC1 family	Inorganic ion transport and metabolism [P]	0.73
COG2272	Carboxylesterase type B	Lipid transport and metabolism [I]	0.73
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.73
COG2337	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	Defense mechanisms [V]	0.73
COG2361	HEPN domain protein, predicted toxin of MNT-HEPN system	Defense mechanisms [V]	0.73
COG2445	Uncharacterized HEPN domain protein YutE, UPF0331/DUF86 family	General function prediction only [R]	0.73
COG2766	Predicted Ser/Thr protein kinase	Signal transduction mechanisms [T]	0.73
COG2860	Uncharacterized membrane protein YeiH	Function unknown [S]	0.73
COG3590	Predicted metalloendopeptidase	Posttranslational modification, protein turnover, chaperones [O]	0.73
COG3661	Alpha-glucuronidase	Carbohydrate transport and metabolism [G]	0.73
COG3741	N-formylglutamate amidohydrolase	Amino acid transport and metabolism [E]	0.73
COG3797	Uncharacterized conserved protein, DUF1697 family	Function unknown [S]	0.73
COG3931	Predicted N-formylglutamate amidohydrolase	Amino acid transport and metabolism [E]	0.73
COG4311	Sarcosine oxidase delta subunit	Amino acid transport and metabolism [E]	0.73
COG5598	Trimethylamine:corrinoid methyltransferase	Coenzyme transport and metabolism [H]	0.73

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	83.94 %
Unclassified	root	N/A	16.06 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	83.94 %
Unclassified	root	N/A	16.06 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	83.94 %
Unclassified	root	N/A	16.06 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	69.34 %
Unclassified	root	N/A	16.06 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.46 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	46.72 %
Unclassified	root	N/A	16.06 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.19 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	1.46 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.46 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.73 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.06 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	5.11 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.19 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1.46 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.46 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.73 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	0.73 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.73 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.06 %
Steroidobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	5.11 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.19 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1.46 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1.46 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.73 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.73 %
Chromatiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	0.73 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.06 %
Steroidobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	4.38 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.19 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1.46 %
Nannocystineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae	0.73 %
Lamprocystis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Lamprocystis	0.73 %
Sorangiineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae	0.73 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.73 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.73 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.06 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.19 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1.46 %
Sandaracinaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Sandaracinaceae	0.73 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	0.73 %
Kofleriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae	0.73 %
Lamprocystis purpurea	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Lamprocystis → Lamprocystis purpurea	0.73 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.73 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.73 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.06 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.19 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1.46 %
Sandaracinus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Sandaracinaceae → Sandaracinus	0.73 %
unclassified Kofleriaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → unclassified Kofleriaceae	0.73 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	0.73 %
Lamprocystis purpurea	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Lamprocystis → Lamprocystis purpurea	0.73 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.73 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.73 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.06 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.19 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1.46 %
Kofleriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → unclassified Kofleriaceae → Kofleriaceae bacterium	0.73 %
Sandaracinus amylolyticus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Sandaracinaceae → Sandaracinus → Sandaracinus amylolyticus	0.73 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	0.73 %
Lamprocystis purpurea	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Lamprocystis → Lamprocystis purpurea	0.73 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.73 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.73 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.73 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2162886006\|SwRhRL3b_contig_3949795	All Organisms → cellular organisms → Bacteria	1072	Open in IMG/M
3300000956\|JGI10216J12902_105766405	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	910	Open in IMG/M
3300001545\|JGI12630J15595_10084526	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	623	Open in IMG/M
3300002908\|JGI25382J43887_10480405	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	526	Open in IMG/M
3300003321\|soilH1_10086917	All Organisms → cellular organisms → Bacteria → Proteobacteria	1230	Open in IMG/M
3300003323\|rootH1_10248746	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1908	Open in IMG/M
3300004082\|Ga0062384_101216125	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	548	Open in IMG/M
3300004635\|Ga0062388_101114647	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	775	Open in IMG/M
3300005180\|Ga0066685_10727655	Not Available	679	Open in IMG/M
3300005289\|Ga0065704_10093287	All Organisms → cellular organisms → Bacteria	2606	Open in IMG/M
3300005329\|Ga0070683_100414537	All Organisms → cellular organisms → Bacteria	1285	Open in IMG/M
3300005329\|Ga0070683_101565019	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	634	Open in IMG/M
3300005336\|Ga0070680_100049162	All Organisms → cellular organisms → Bacteria → Proteobacteria	3437	Open in IMG/M
3300005347\|Ga0070668_100713503	All Organisms → cellular organisms → Bacteria	885	Open in IMG/M
3300005434\|Ga0070709_10405993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1018	Open in IMG/M
3300005436\|Ga0070713_100395047	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1290	Open in IMG/M
3300005534\|Ga0070735_10180735	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1297	Open in IMG/M
3300005535\|Ga0070684_100937221	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	812	Open in IMG/M
3300005557\|Ga0066704_10610705	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	700	Open in IMG/M
3300005564\|Ga0070664_100556254	All Organisms → cellular organisms → Bacteria → Proteobacteria	1061	Open in IMG/M
3300005566\|Ga0066693_10000454	All Organisms → cellular organisms → Bacteria → Proteobacteria	7693	Open in IMG/M
3300005591\|Ga0070761_10000059	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	72905	Open in IMG/M
3300005719\|Ga0068861_100015485	All Organisms → cellular organisms → Bacteria	5375	Open in IMG/M
3300005983\|Ga0081540_1023237	All Organisms → cellular organisms → Bacteria → Proteobacteria	3633	Open in IMG/M
3300006638\|Ga0075522_10175653	All Organisms → cellular organisms → Bacteria	1097	Open in IMG/M
3300006794\|Ga0066658_10817345	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	527	Open in IMG/M
3300009095\|Ga0079224_101528914	All Organisms → cellular organisms → Bacteria	947	Open in IMG/M
3300009101\|Ga0105247_11330134	Not Available	578	Open in IMG/M
3300009143\|Ga0099792_10927857	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	578	Open in IMG/M
3300009500\|Ga0116229_10000625	All Organisms → cellular organisms → Bacteria → Proteobacteria	49145	Open in IMG/M
3300009500\|Ga0116229_10083363	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2942	Open in IMG/M
3300009510\|Ga0116230_10092042	All Organisms → cellular organisms → Bacteria	2623	Open in IMG/M
3300009510\|Ga0116230_11043254	Not Available	596	Open in IMG/M
3300009525\|Ga0116220_10016366	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2966	Open in IMG/M
3300009551\|Ga0105238_11570607	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	688	Open in IMG/M
3300009697\|Ga0116231_10161520	All Organisms → cellular organisms → Bacteria → Proteobacteria	1299	Open in IMG/M
3300009701\|Ga0116228_10290530	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1147	Open in IMG/M
3300009787\|Ga0116226_10312580	All Organisms → cellular organisms → Bacteria → Acidobacteria	1617	Open in IMG/M
3300009787\|Ga0116226_11744864	Not Available	570	Open in IMG/M
3300010049\|Ga0123356_10038688	All Organisms → cellular organisms → Bacteria	4445	Open in IMG/M
3300010335\|Ga0134063_10189194	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	965	Open in IMG/M
3300010371\|Ga0134125_11759832	Not Available	674	Open in IMG/M
3300012096\|Ga0137389_11264948	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	631	Open in IMG/M
3300012198\|Ga0137364_10009568	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	5461	Open in IMG/M
3300012203\|Ga0137399_10098729	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2255	Open in IMG/M
3300012203\|Ga0137399_10922741	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	735	Open in IMG/M
3300012203\|Ga0137399_10986604	All Organisms → cellular organisms → Bacteria → Proteobacteria	709	Open in IMG/M
3300012205\|Ga0137362_10184836	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1792	Open in IMG/M
3300012582\|Ga0137358_10000874	All Organisms → cellular organisms → Bacteria → Proteobacteria	15233	Open in IMG/M
3300012683\|Ga0137398_10895071	Not Available	619	Open in IMG/M
3300012685\|Ga0137397_10046742	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3100	Open in IMG/M
3300012924\|Ga0137413_10108928	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1743	Open in IMG/M
3300012924\|Ga0137413_10460753	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	927	Open in IMG/M
3300012927\|Ga0137416_10671959	All Organisms → cellular organisms → Bacteria	908	Open in IMG/M
3300012927\|Ga0137416_11985955	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	533	Open in IMG/M
3300012930\|Ga0137407_10155649	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2023	Open in IMG/M
3300012931\|Ga0153915_11569773	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	770	Open in IMG/M
3300012964\|Ga0153916_10450643	Not Available	1352	Open in IMG/M
3300013307\|Ga0157372_12406514	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	605	Open in IMG/M
3300013307\|Ga0157372_13359957	Not Available	509	Open in IMG/M
3300014169\|Ga0181531_10574047	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	698	Open in IMG/M
3300014492\|Ga0182013_10004392	All Organisms → cellular organisms → Bacteria → Proteobacteria	16970	Open in IMG/M
3300014658\|Ga0181519_10164325	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1410	Open in IMG/M
3300014838\|Ga0182030_10944250	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Lamprocystis → Lamprocystis purpurea	766	Open in IMG/M
3300015170\|Ga0120098_1006895	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1153	Open in IMG/M
3300015170\|Ga0120098_1014866	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	903	Open in IMG/M
3300015193\|Ga0167668_1007605	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2442	Open in IMG/M
3300015242\|Ga0137412_10062096	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3041	Open in IMG/M
3300015242\|Ga0137412_10209507	All Organisms → cellular organisms → Bacteria	1554	Open in IMG/M
3300017961\|Ga0187778_10001019	All Organisms → cellular organisms → Bacteria	19959	Open in IMG/M
3300017970\|Ga0187783_10001882	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	15540	Open in IMG/M
3300018422\|Ga0190265_10248250	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1825	Open in IMG/M
3300018431\|Ga0066655_10608331	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	737	Open in IMG/M
3300019458\|Ga0187892_10000026	All Organisms → cellular organisms → Bacteria → Proteobacteria	296178	Open in IMG/M
3300019888\|Ga0193751_1191864	Not Available	693	Open in IMG/M
3300020199\|Ga0179592_10007658	All Organisms → cellular organisms → Bacteria → Proteobacteria	4631	Open in IMG/M
3300020579\|Ga0210407_10839452	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300020583\|Ga0210401_10227169	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Sandaracinaceae → Sandaracinus → Sandaracinus amylolyticus	1725	Open in IMG/M
3300021168\|Ga0210406_10359619	All Organisms → cellular organisms → Bacteria → Proteobacteria	1173	Open in IMG/M
3300021168\|Ga0210406_10962270	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	638	Open in IMG/M
3300021170\|Ga0210400_10824087	Not Available	760	Open in IMG/M
3300022897\|Ga0247764_1168130	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	667	Open in IMG/M
3300022917\|Ga0247777_1052768	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1435	Open in IMG/M
3300023101\|Ga0224557_1199128	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	697	Open in IMG/M
3300023265\|Ga0247780_1073643	Not Available	878	Open in IMG/M
3300024249\|Ga0247676_1035378	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	805	Open in IMG/M
3300025319\|Ga0209520_10716197	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	561	Open in IMG/M
3300025914\|Ga0207671_10398088	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1095	Open in IMG/M
3300025917\|Ga0207660_10026262	All Organisms → cellular organisms → Bacteria → Proteobacteria	3964	Open in IMG/M
3300025928\|Ga0207700_10995801	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	750	Open in IMG/M
3300025944\|Ga0207661_11689012	Not Available	578	Open in IMG/M
3300025945\|Ga0207679_10717488	All Organisms → cellular organisms → Bacteria → Proteobacteria	908	Open in IMG/M
3300025972\|Ga0207668_10693993	All Organisms → cellular organisms → Bacteria	894	Open in IMG/M
3300026118\|Ga0207675_100026969	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	5348	Open in IMG/M
3300026305\|Ga0209688_1045692	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	827	Open in IMG/M
3300026317\|Ga0209154_1018069	All Organisms → cellular organisms → Bacteria	3329	Open in IMG/M
3300026318\|Ga0209471_1122296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1106	Open in IMG/M
3300026325\|Ga0209152_10439807	Not Available	522	Open in IMG/M
3300026528\|Ga0209378_1195704	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	680	Open in IMG/M
3300026557\|Ga0179587_10006360	All Organisms → cellular organisms → Bacteria → Proteobacteria	5962	Open in IMG/M
3300026557\|Ga0179587_10541764	All Organisms → cellular organisms → Bacteria	765	Open in IMG/M
3300027568\|Ga0208042_1117866	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	669	Open in IMG/M
3300027651\|Ga0209217_1104814	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	805	Open in IMG/M
3300027768\|Ga0209772_10289938	Not Available	519	Open in IMG/M
3300027807\|Ga0209208_10123530	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1647	Open in IMG/M
3300027853\|Ga0209274_10000023	All Organisms → cellular organisms → Bacteria → Proteobacteria	173582	Open in IMG/M
3300027860\|Ga0209611_10033286	All Organisms → cellular organisms → Bacteria → Proteobacteria	4892	Open in IMG/M
3300027867\|Ga0209167_10253404	Not Available	946	Open in IMG/M
3300027884\|Ga0209275_10801960	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	543	Open in IMG/M
3300027903\|Ga0209488_10867366	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	635	Open in IMG/M
3300027908\|Ga0209006_11178758	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	600	Open in IMG/M
3300027986\|Ga0209168_10138507	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1238	Open in IMG/M
3300028536\|Ga0137415_10292407	Not Available	1433	Open in IMG/M
3300028773\|Ga0302234_10428219	Not Available	566	Open in IMG/M
3300030509\|Ga0302183_10417861	Not Available	513	Open in IMG/M
3300030520\|Ga0311372_10542844	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1687	Open in IMG/M
3300030613\|Ga0299915_10639594	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	680	Open in IMG/M
3300030998\|Ga0073996_10129532	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	583	Open in IMG/M
3300031047\|Ga0073995_10112419	All Organisms → cellular organisms → Bacteria	3360	Open in IMG/M
3300031231\|Ga0170824_107367215	Not Available	576	Open in IMG/M
3300031231\|Ga0170824_115005210	All Organisms → cellular organisms → Bacteria → Proteobacteria	2845	Open in IMG/M
3300031231\|Ga0170824_123539617	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	682	Open in IMG/M
3300031236\|Ga0302324_103604831	Not Available	500	Open in IMG/M
3300031456\|Ga0307513_10205820	All Organisms → cellular organisms → Bacteria → Proteobacteria	1804	Open in IMG/M
3300031469\|Ga0170819_16875453	Not Available	818	Open in IMG/M
3300031708\|Ga0310686_106697420	All Organisms → cellular organisms → Bacteria → Proteobacteria	7075	Open in IMG/M
3300031708\|Ga0310686_113299067	All Organisms → cellular organisms → Bacteria	2520	Open in IMG/M
3300031708\|Ga0310686_118728354	Not Available	737	Open in IMG/M
3300031715\|Ga0307476_10289809	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1200	Open in IMG/M
3300031823\|Ga0307478_10270938	All Organisms → cellular organisms → Bacteria → Proteobacteria	1384	Open in IMG/M
3300031823\|Ga0307478_10507212	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → unclassified Kofleriaceae → Kofleriaceae bacterium	1006	Open in IMG/M
3300031912\|Ga0306921_10334011	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1773	Open in IMG/M
3300032770\|Ga0335085_11127940	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	838	Open in IMG/M
3300032896\|Ga0335075_10177775	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2593	Open in IMG/M
3300033489\|Ga0299912_10112561	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	2382	Open in IMG/M
3300033982\|Ga0371487_0011135	All Organisms → cellular organisms → Bacteria → Proteobacteria	7113	Open in IMG/M
3300034268\|Ga0372943_0773237	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	636	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	81.02%
Host-Associated	Host-Associated	18.98%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.91%
Plants	Host-Associated → Plants	18.25%
Aquatic	Environmental → Aquatic	5.11%
Arthropoda	Host-Associated → Arthropoda	0.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	68.61%
Peat Moss	Host-Associated → Plants → Peat Moss	7.30%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.57%
Freshwater	Environmental → Aquatic → Freshwater	5.11%
Peat	Environmental → Terrestrial → Peat	4.38%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.92%
Plant Litter	Environmental → Terrestrial → Plant Litter	2.19%
Cave	Environmental → Terrestrial → Cave	0.73%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.73%
Roots	Host-Associated → Plants → Roots	0.73%
Rhizome	Host-Associated → Plants → Rhizome	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	51.82%
Loam	Environmental → Terrestrial → Soil → Loam	10.95%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	7.30%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.11%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.38%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	4.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.65%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.92%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	2.19%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.19%
Fossil	Environmental → Terrestrial → Soil → Fossil	1.46%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.73%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.73%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.73%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.47%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	12.41%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.76%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	7.30%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.57%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.38%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	4.38%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.65%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.92%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	2.19%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.19%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.46%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.46%
Unclassified	Environmental → Terrestrial → Soil → Fossil → Unclassified	1.46%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.73%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.73%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.73%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.73%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.73%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.73%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	16.06%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.30%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	7.30%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.38%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	4.38%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.92%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.92%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.19%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.19%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.19%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.19%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.19%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.19%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	2.19%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.46%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	1.46%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.46%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.46%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.46%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.46%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	1.46%
Fossill	Environmental → Terrestrial → Soil → Fossil → Unclassified → Fossill	1.46%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.46%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.46%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.46%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.46%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.73%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.73%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.73%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Agricultural Soil	0.73%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.73%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.73%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.73%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.73%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.73%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.73%
Bio-Ooze	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Bio-Ooze	0.73%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.73%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.73%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	0.73%
Sugarcane Root And Bulk Soil	Host-Associated → Plants → Rhizome → Unclassified → Unclassified → Sugarcane Root And Bulk Soil	0.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.73%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2162886006	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300003323	Sugarcane root Sample H1	Host-Associated	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006638	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300009095	Agricultural soil microbial communities from Utah to study Nitrogen management - Steer compost 2015	Environmental	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009500	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300009510	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fd - Sphagnum fallax MG	Host-Associated	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009697	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fd - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300009701	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum fallax MG	Host-Associated	Open in IMG/M
3300009787	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fa - Sphagnum fallax MG	Host-Associated	Open in IMG/M
3300010049	Embiratermes neotenicus P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P3	Host-Associated	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014658	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015170	Fossil microbial communities from human bone sample from Teposcolula Yucundaa, Mexico - TP48	Environmental	Open in IMG/M
3300015193	Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb6, proglacial stream)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300019458	Bio-ooze microbial communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-3 metaG	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300022897	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L051-202B-4	Environmental	Open in IMG/M
3300022917	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L154-409C-5	Environmental	Open in IMG/M
3300023101	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 10-14	Environmental	Open in IMG/M
3300023265	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L079-202R-5	Environmental	Open in IMG/M
3300024249	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK17	Environmental	Open in IMG/M
3300025319	Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 1	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026305	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142 (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027568	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027768	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027807	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fd - Sphagnum fallax MG (SPAdes)	Host-Associated	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027860	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG (SPAdes)	Host-Associated	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028773	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_2	Environmental	Open in IMG/M
3300030509	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_2	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030613	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT92D227	Environmental	Open in IMG/M
3300030998	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-3A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031047	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1B (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031456	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM	Host-Associated	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300033489	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT95D214	Environmental	Open in IMG/M
3300033982	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB22AY SIP fraction	Environmental	Open in IMG/M
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
SwRhRL3b_0834.00001810	2162886006	Switchgrass Rhizosphere	MESKLANDAERALIEATQKLSPEERLNAFLTHCRLVMELHEASQKPVTSPSPQPS
JGI10216J12902_1057664052	3300000956	Soil	MESKVAKEAERALVEATQRLSPEERLNAFLAHSRLVMELYEAGRKMRGTEQQASS*
JGI12630J15595_100845262	3300001545	Forest Soil	MESKVAKEAERALIEATQRLSPEERLNAFLEHCRLVTQLYEAGEKLRSHPLLQKP*
JGI25382J43887_104804052	3300002908	Grasslands Soil	MESKIAKEAERALIEATQRLSPEERVNAFLAHCRLVMELFEAGQKVQIRQTQRQP*
soilH1_100869171	3300003321	Sugarcane Root And Bulk Soil	MESKVAKEAEWALMESTQRLGFEERLNAFLAHCRLVMELYEAGQRARTAQPQS*
rootH1_102487462	3300003323	Sugarcane Root And Bulk Soil	MESKVAKEAERALIEATQRLSPEERLNAFLAHCRLIMELYEAGQEARSQPARPQI*
Ga0062384_1012161252	3300004082	Bog Forest Soil	MESKVAKEAERALIDATQRLSPEERLNAFLEHCRLVTQLYQAGEQVRARTPLRKP*
Ga0062388_1011146472	3300004635	Bog Forest Soil	RLPGMKSKLAEAAERALVDATQRLSPEQRVNAFLAHCRLVTQLYEAGRKLRSQVAHSQS*
Ga0066685_107276551	3300005180	Soil	MESKIAKEAERALIEATQRLSPEERVNAFLAHCRLVMELFEAGRKVQIRQTQRQP*
Ga0065704_100932871	3300005289	Switchgrass Rhizosphere	MESKLANDAERALIEATQKLSPEERLNAFLTHCRLVMELHEASQKPVTSPSPQPS*
Ga0070683_1004145374	3300005329	Corn Rhizosphere	MESKVAKEAEWALMESTQRLGFEERLNAFLAHCRLVMAPYEPGQAQIHSARLPQ*
Ga0070683_1015650191	3300005329	Corn Rhizosphere	MESKVAKEAERALVEATQRLSPEERLNAFLAHCRLVMELYEAGQRARTAQPQP*
Ga0070680_1000491622	3300005336	Corn Rhizosphere	MESKVAKEAEWALMESTERLGFEERLNAFLAHCRLVMALYEPGQAQIHSARLPQ*
Ga0070668_1007135032	3300005347	Switchgrass Rhizosphere	MDSKVANEAEHALVEATQRLSPEEGLNAFLAHCRLVMDLFDAGQKIRASEQRTSSP*
Ga0070709_104059931	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MESKVAKEAERALVEATQRLSPEERLNAFLAHCRLVMELYEAGQKARSQAAQPQP*
Ga0070713_1003950473	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MESKVAKEAERALVEATQRLGPEERLNAFLTHCRLVMELYETGQKVRSQSAQPQS*
Ga0070735_101807353	3300005534	Surface Soil	MESKVAKQAERALVEATQRLSPEERLNAFLAHCRLVIELHEAGQKVQRRSTQRQT*
Ga0070684_1009372212	3300005535	Corn Rhizosphere	MESKVAKEAEWALMESTQRLGFEERLNAFLAHCRLVMAPYEPGQAQIHSARSPQ*
Ga0066704_106107052	3300005557	Soil	VESKIAKEAERALIEATQRLSPEERVNACLAHCRLVMELFEAGQKVQIRQTQRQP*
Ga0070664_1005562543	3300005564	Corn Rhizosphere	MESKVAKEAEWALMESTQRLGFEERLDAFLAHCRLVMALYEPGQAQIHSARLPQ*
Ga0066693_100004549	3300005566	Soil	RVMESKIAKEAERALIEATQRLSPEERVNAFLAHCRLVMELFEAGQKVQIRQTQRQP*
Ga0070761_1000005929	3300005591	Soil	MKSKLAEAAEKALVEATQRLSPEQRVNAFLAHCRLIMQLYEAGQKLRSHAAHSQS*
Ga0068861_1000154854	3300005719	Switchgrass Rhizosphere	MESKLAKEAERALVEATQRMSPEERLNSFLEHCRLVTELYEAGLKLQPPPQAQS*
Ga0081540_10232376	3300005983	Tabebuia Heterophylla Rhizosphere	MDSKLAEAAERALVEATQKLRPEERLNAFLEHCRLVTQLFETGQKMRDAGTSQLKP*
Ga0075522_101756531	3300006638	Arctic Peat Soil	VESQLAKDGARALVQATQKLSPEERLNACLAHCQLVTQLYEAGQRIRSPDTQPRKPWELA
Ga0066658_108173451	3300006794	Soil	IAKEAERALIEATQRLSPEERVNAFLAHCRLVMELFEAGQKVQIRQTQRQP*
Ga0079224_1015289141	3300009095	Agricultural Soil	MESRLASEARRALVAATQKLTPEQRVEAFLVHCRLLAELRGAGRNVPPQTPAS*
Ga0105247_113301342	3300009101	Switchgrass Rhizosphere	MESKVAKEAERALVEATQRLSLEERLNAFLAHCRLVMELYEAGQRARTAQPQP*
Ga0099792_109278571	3300009143	Vadose Zone Soil	MESKIAKAAERGLVEATQRLSPEERLNAFLEHCRLVMELYEAGAKIRVRVLRSQ*
Ga0116229_1000062529	3300009500	Host-Associated	MESKLAKQAERALVDATQTLKPEQRVNAYLAHCRLVMQLHEAGRKLRADAAPPPP*
Ga0116229_100833634	3300009500	Host-Associated	MESTLAKDAELALVEATQRLSPEQRVEAFLAHSRLMVELYGAGRELRAAEPKLHP*
Ga0116230_100920424	3300009510	Host-Associated	MESTLAKDAELALVEATQRLSPEQRVEAFLAHSRLMVELYAAGRELRAAEPKLRP*
Ga0116230_110432541	3300009510	Host-Associated	ESTLAKDAELALVEATQRLSPEQRVEAFLAHSRLVMELYGAGRQQRAAEPNLRP*
Ga0116220_100163664	3300009525	Peatlands Soil	MESKLAKEAERALVEATQQLSPEERLNAFLAHCRLVMELYEAGQKMRARTPQPRS*
Ga0105238_115706072	3300009551	Corn Rhizosphere	MESKVAKEAERALVEATQRLSPEERLNAFLAHCRLVMELCEAGQRARTAQPQS*
Ga0116231_101615202	3300009697	Host-Associated	MESTLAKDAELALVEATQRLSPEQRVEAFLAHSRLMVELYGAGRELRAAEPKLRP*
Ga0116228_102905301	3300009701	Host-Associated	TVESTLAKVAELALVEATQRLSPGERVEAFLAHSRLVTELYRAGTKLRASEPQPQPQP*
Ga0116226_103125802	3300009787	Host-Associated	MESKLAKEAELALVDATQRLCPEERVIAYLAHCRLVMQLYEAGQQLRANTSDRPK*
Ga0116226_117448642	3300009787	Host-Associated	VESTLAKVAELALVEATQRLSPGERVEAFLAHSRLVTELYRAGTKLRASEPQPQPQP*
Ga0123356_100386887	3300010049	Termite Gut	MQSKLAREAERSLIEATQRLPSEQRLNAFLEHCRLVTELYEAGQKIRSPKPRQKS*
Ga0134063_101891943	3300010335	Grasslands Soil	MESKIAKEAERALIEATQRLSPEERVNAFLAHCRLVMELFEAGQKVQIRQTQ
Ga0134125_117598322	3300010371	Terrestrial Soil	MESKLAKQAEQALIEATQRLTPEERLNAFLAHCRLVAELYEAGQKMRAASPPQS*
Ga0137389_112649481	3300012096	Vadose Zone Soil	KALVEATQKLCPEERLNAFLEHCRLVTQLYEAGQKIRSAGTSPLQP*
Ga0137364_100095683	3300012198	Vadose Zone Soil	MESKIVKEAERALIEATQRLSPEERVNAFLAHCRLVMELFEAGQKVQIRQTQRQP*
Ga0137399_100987293	3300012203	Vadose Zone Soil	MKSTLAKEAEQALVEATQRLSPEERVNAFLEHCRLVMELYEAGQKLRSGSPQPRP*
Ga0137399_109227412	3300012203	Vadose Zone Soil	MKSTLAKEAEQALVEATQRLSPEERVNAFLEHCRLVMELYEAGQKLRSGSPRP*
Ga0137399_109866042	3300012203	Vadose Zone Soil	MESKVAKEAERALIEATQRLSPEERLNAFLEHCRLVTQLYEAGQEIRSRAPQRKP*
Ga0137362_101848364	3300012205	Vadose Zone Soil	MESKIAKAAERGLVEATQRLSPEERLNAFLEHCRLVMELYEAGGKIRARVLRSQ*
Ga0137358_100008749	3300012582	Vadose Zone Soil	MESKIAKAAERGLVEATQRLSPEERLNAFLEHCRLVIELYEAGGKIRARVLRSQ*
Ga0137398_108950711	3300012683	Vadose Zone Soil	MKSTLAKEAEQALVEATQRLSPEERVNAFLEHCRLVMELYEAGQKL
Ga0137397_100467423	3300012685	Vadose Zone Soil	MKSTLAKEAEQALVEATQRLSPEERVNAFLEHCRLVMELYEAGQKLRSGSPQP*
Ga0137413_101089282	3300012924	Vadose Zone Soil	MESKLAKAAERALVEATQRLNPEERLNAFLVHCRLVTELYEAGRKMRAGFPQP*
Ga0137413_104607531	3300012924	Vadose Zone Soil	AAERALVEATQRLGPEERLNAFLVHCRLVTELYEAGQKLRASFPQP*
Ga0137416_106719592	3300012927	Vadose Zone Soil	MESKLAKEAEKSLVEATQKLCPEERLNAFLEHCRLVTQLYEAGQKLRSPGTSQLKP*
Ga0137416_119859552	3300012927	Vadose Zone Soil	SRTGGVTSSGWLRYTRQMESKVAKEAERALIEATQRLSPEERLNAFLEHCRLVTQLYEAGQEIRSRAPQRKP*
Ga0137407_101556493	3300012930	Vadose Zone Soil	MESKIAKAAERGLVEATQRLRPEERLNAFLEHCRLVMELYEAGAKIRARVLRSQ*
Ga0153915_115697732	3300012931	Freshwater Wetlands	MESKLANEAERALIEATQRLSPEERLNSFLARCRLIMELHEAGQKLQASQPRPAS*
Ga0153916_104506433	3300012964	Freshwater Wetlands	MESKVAKQAERALVEATQRLSPEERLNAFLTHCRLVVELYEAGRKIRTRELPRN*
Ga0157372_124065141	3300013307	Corn Rhizosphere	TWDMESKVAKEAERALVEATQRLSPEERLNAFLAHCRLVMELYEAGQKARSQAAQPQP*
Ga0157372_133599571	3300013307	Corn Rhizosphere	MESKVAKEAEWALMESTQRLGFEERLNAFLAHCRLVMALYEPGQAQIHSARLPQ*
Ga0181531_105740472	3300014169	Bog	MESKVAKEAERALVEATQRLSPEERLNAFLAHCRLVMELYEAGQRTRTAQPQP*
Ga0182013_1000439212	3300014492	Bog	MESKLATEAERALVQATQRLSPEERVNAFLVHCRLITELYEAGEKIRADALKQQP*
Ga0181519_101643252	3300014658	Bog	MESKVAKEAERALVEATQRLSPEERLNAFLAHCRLVTELHEAGQRTRTAHPQP*
Ga0182030_109442501	3300014838	Bog	MQSKLANEAERALVEATQHLSPEERLNAYLAHCRLVMELYEAGEKIRSQALQRQS*
Ga0120098_10068952	3300015170	Fossill	MESKIAKEAERSLIEATQRLSPEERLNAYLEHCRLVMELYEAGQRMRSQSSPPPESHENH
Ga0120098_10148662	3300015170	Fossill	MESKLAKEAHQALVEAMQRLTPEERLNAFLVHCRLMMDLHRAGEQMRTRKSPRSV*
Ga0167668_10076055	3300015193	Glacier Forefield Soil	MESKLAKAAERALVEATQRLSPEERLNAFLAHCRLVIELYEAGQKMRACIPQPQ*
Ga0137412_100620964	3300015242	Vadose Zone Soil	MESKLAKAAERALVEATQRLNPEERLNAFLVHCRLVTELYEAGRKMRAGSPQP*
Ga0137412_102095072	3300015242	Vadose Zone Soil	MESKIAKSAERGLVEATQRLSPEERLNAFLEHCRLVMELYEAGAKIRVRVLRSQ*
Ga0187778_1000101922	3300017961	Tropical Peatland	MRSQLARKAKRALLEATQRLTPEERLNAFLAHSRLVMQLYRAGQKLRHPFARQSPR
Ga0187783_100018828	3300017970	Tropical Peatland	VESKLAQETDRSLVEATQRLSPEERLNAFLTHCRLVMELYEAGRELEARSGRRQS
Ga0190265_102482503	3300018422	Soil	MESRIAAEAERALIEATQRLSPEERVNAFLTHCRLVAELRAAGEALRASEAKLT
Ga0066655_106083311	3300018431	Grasslands Soil	MESKIAKEAERALIEATQRLSPEERVNAFLAHCRLVMELFEAGQKVQIRQTQRQP
Ga0187892_1000002687	3300019458	Bio-Ooze	MESKVAVSSDRSLVEGTQSLSPEQRVEAFLEHCRLVMELYEAGQRLSEGQPPRQQ
Ga0193751_11918642	3300019888	Soil	MESKIATAAERGLVEATQRLSPEERLNAFLEHCRLVMELYEAGQKMRAG
Ga0179592_100076583	3300020199	Vadose Zone Soil	MKSTLAKEAEQALVEATQRLSPEERVNAFLEHCRLVMELYEAGQKLRSGSPQP
Ga0210407_108394522	3300020579	Soil	MESKLAKAAESALVEATQRLSPEERLNAFLAHCRLVIELYEAGQKMRACIPQPQ
Ga0210401_102271692	3300020583	Soil	MKSKLAEAAEKALVEATQRLSPEQRVNAFLAHCRLVMQLYEAGQKLRSNAAAHSQS
Ga0210406_103596193	3300021168	Soil	MESKLAKDAERALIDATQKLRPEERLNAFLEHCQLMTQLYEAGQRIRAPDTRQRKP
Ga0210406_109622701	3300021168	Soil	MESKVAKEAERALIEASQKLSPEERLNAFLEHCRLVTQLYEAGEKMRSRLPLQKP
Ga0210400_108240871	3300021170	Soil	MESKVAKEAERALIEATQRLSPEERLNAFLAHCRLVMELHEAGQKMVGPADHQQP
Ga0247764_11681302	3300022897	Plant Litter	AGGRLSSMESKVAKEAERALIEATQRLSPEDRVRAFLSHSRLVLKLHRAGQRLHSKEQKQ
Ga0247777_10527682	3300022917	Plant Litter	MESKVAKEAERALIEATQRLSPEDRVRAFLSHSRLVLKLHRAGQRLHSKEQKQP
Ga0224557_11991282	3300023101	Soil	MESKLATEAERALVQATQRLSPEERVNAFLVHCRLITELYEAGEKIRADALKQQP
Ga0247780_10736432	3300023265	Plant Litter	MESRIAKEAEIALVEATQRLSPEERLNAFLVHCRLMMELHEAGRKLSGTPRSTT
Ga0247676_10353782	3300024249	Soil	MESKIAKGAERALVEATQRLSPEERLNAFLMHCRLVTELYEAGQKMRVNVPQP
Ga0209520_107161972	3300025319	Soil	MESKLARQSERELIAATQRLSAEERLNAFLRHCQLVMELYRAGRKSSSPP
Ga0207671_103980882	3300025914	Corn Rhizosphere	MESKVAKEAERALVEATQRLSPEERLNAFLAHCRLVMELYEAGQRARTAQPQP
Ga0207660_100262624	3300025917	Corn Rhizosphere	MESKVAKEAEWALMESTERLGFEERLNAFLAHCRLVMALYEPGQAQIHSARLPQ
Ga0207700_109958012	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MESKVAKEAERALVEATQRLSPEERLNAFLTHCRLVMELYETGQKVRSQSAQPQS
Ga0207661_116890121	3300025944	Corn Rhizosphere	MESKVAKEAEWALMESTQRLGFEERLNAFLAHCRLVMAPYEPGQAQIHSARLPQ
Ga0207679_107174881	3300025945	Corn Rhizosphere	MESKVAKEAEWALMESTQRLGFEERLDAFLAHCRLVMAPYEPGQ
Ga0207668_106939932	3300025972	Switchgrass Rhizosphere	MDSKVANEAEHALVEATQRLSPEEGLNAFLAHCRLVMDLFDAGQKIRASEQRTSSP
Ga0207675_1000269694	3300026118	Switchgrass Rhizosphere	MESKLAKEAERALVEATQRMSPEERLNSFLEHCRLVTELYEAGLKLQPPPQAQS
Ga0209688_10456922	3300026305	Soil	ESKIAKEAERALIEATQRLSPEERVNAFLAHCRLVMELFEAGQKVQIRQTQRQP
Ga0209154_10180695	3300026317	Soil	MESKIAKEAERALIEATQRLSPEERVNAFLAHCRLVMELFEAGQKLQIRQTQRQP
Ga0209471_11222963	3300026318	Soil	KIAKEAERALIEATQRLSPEERVNAFLAHCRLVMELFEAGQKVQIRQTQRQP
Ga0209152_104398071	3300026325	Soil	MESKIAKEAERALIEATQRLSPEERVNAFLAHCRLVMELFEAGQKVQI
Ga0209378_11957041	3300026528	Soil	LRGMESKIAKEAERALIEATQRLSPEERVNAFLAHCRLVMELFEAGQKVQIRQTQRQP
Ga0179587_100063603	3300026557	Vadose Zone Soil	MKSTLAKEAEQALVEATQRLSPEERVNAFLEHCRLVMELYEAGQKLRSGSPRP
Ga0179587_105417641	3300026557	Vadose Zone Soil	MESKLAKAAEKSLVEATQKLCPEERLNAFLEHCRLVTQWYEAGQKLRSPG
Ga0208042_11178662	3300027568	Peatlands Soil	MESKLAKEAERALVEATQQLSPEERLNAFLAHCRLVMELYEAGQKMRARTPQPRS
Ga0209217_11048142	3300027651	Forest Soil	MESKVAKEAERALIEATQRLSPEERLNAFLEHCRLVTQLYEAGEKLRSHPLLQKP
Ga0209772_102899381	3300027768	Bog Forest Soil	MESKVAKEAERALIDATQRLSPEERLNAFLEHCRLVTQLYQAGEQVRART
Ga0209208_101235301	3300027807	Host-Associated	DQRAVAQHGLDIMESTLAKDAELALVEATQRLSPEQRVEAFLAHSRLMVELYAAGRELRAAEPKLRP
Ga0209274_1000002361	3300027853	Soil	MKSKLAEAAEKALVEATQRLSPEQRVNAFLAHCRLIMQLYEAGQKLRSHAAHSQS
Ga0209611_100332862	3300027860	Host-Associated	MESKLAKQAERALVDATQTLKPEQRVNAYLAHCRLVMQLHEAGRKLRADAAPPPP
Ga0209167_102534042	3300027867	Surface Soil	MKSKLAEAAERALVDATQRLSPEQRVNAYLAHCRLITQLYEAGRKLRSQAAHL
Ga0209275_108019602	3300027884	Soil	KSKLAEAAERALVDATQRLSPEQRVNAYLAHCRLITQLYEAGRKLRSQAAHLQS
Ga0209488_108673663	3300027903	Vadose Zone Soil	MESKIAKAAERGLVEATQRLSPEERLNAFLEHCRLVMELYEAGAKIRARVLRSQ
Ga0209006_111787582	3300027908	Forest Soil	KGMKSKLAEKAEQALIEATQKLSPEERLNAFLEHCRLITELSEAGQQIRAGGTPQPKP
Ga0209168_101385071	3300027986	Surface Soil	MESKVAKQAERALVEATQRLSPEERLNAFLAHCRLVIELHEAGQKVQRRSTQRQT
Ga0137415_102924073	3300028536	Vadose Zone Soil	MKSTLAKEAEQALVEATQRLSPEERVNAFLEHCRLVMELYEAGQKLRSGSPQPRP
Ga0302234_104282192	3300028773	Palsa	MKSKLAEEAEQALIEATQKLSPEERLNAFLEHCRLVTELYEAGRQIRAGGTPQPKP
Ga0302183_104178612	3300030509	Palsa	MESKVAKEAEQALVEATRRMSPEQRVNAYLAHCRLVMQLYEAGRKLRADAARPTA
Ga0311372_105428441	3300030520	Palsa	MKSKLAEEAEQALIEATQKLSPEERLNAFLKHCQLVMELYEAAEKIRAANLKQPPS
Ga0299915_106395942	3300030613	Soil	MESKLAKQAERALIEATQRLSPEERLNAFLAHCRLVMELYDAGQKMRAREQPAPA
Ga0073996_101295322	3300030998	Soil	VAKEAERALIEDTQRLTPEQRVDAFLAHCRLVMELYEAGRQMRARSAATP
Ga0073995_101124192	3300031047	Soil	MESKVAKEAERALIEDTQRLTPEQRVDAFLAHCRLVMELYEAGRQMRARSAATP
Ga0170824_1073672152	3300031231	Forest Soil	MESKLAKDAERALVEATQKMRPEERLNAFLAHCRLVTQLYEAGQRIRSPDAQQPKL
Ga0170824_1150052104	3300031231	Forest Soil	MESKLAMEAERQLIEATQSLSPQERLNAMLEHCRLVAELYQAGQELRSRPLLQKL
Ga0170824_1235396172	3300031231	Forest Soil	MESKLAKEAERALVEATQKLRPEERLNAFLEHCQLVTQLYEAGQKIRSSDSPLRKP
Ga0302324_1036048311	3300031236	Palsa	MESRIAKAAERALVAATQRLTPEERLNAFLVHCRLVTELYEAGRKMRASLPPA
Ga0307513_102058202	3300031456	Ectomycorrhiza	VQSKLADEAERALIETTQKMSPEERLNAFLTHCRLMMELYEAGRKVAAAQPRQAS
Ga0170819_168754532	3300031469	Forest Soil	MEAERQLIEATQSLSPQERLNAMLEHCRLVAELYQAGQELRSRPLLQKL
Ga0310686_1066974208	3300031708	Soil	MKSKLAEEAEQALIEATQKLCPEERLNAFLEHCRLVTQLHEAGQQLRSTDTPRSTS
Ga0310686_1132990671	3300031708	Soil	LAREARQALLAESQLLTPEERLNAFLEHCQLMMALYEAGEKLRSGVLHEHS
Ga0310686_1187283542	3300031708	Soil	MKSKPAEEAEQALIEATQKLSPEERLNAFLEHCQVVMELYEAGKKIRAANLRQPPSSKHSPS
Ga0307476_102898092	3300031715	Hardwood Forest Soil	MKSKVAKEAERALVEATQRLSPEERLNAFVAHCRLVMELYEAGQMARSEPVQPQP
Ga0307478_102709384	3300031823	Hardwood Forest Soil	MESKLAKDAEKALIEATQRLCPEERLNAFLQHCRLTMQLFEAGQELRLRTSQQKL
Ga0307478_105072122	3300031823	Hardwood Forest Soil	MKSKVAKEAERALVEATQRLSPEERLNAFVAHCRLVMELYEAGQTARSEPAQPQP
Ga0306921_103340113	3300031912	Soil	VKSKLNQEADRRLVDATQQLSPEERSNAFLTHCRLVMELYEIGRELEARTGRPQS
Ga0335085_111279401	3300032770	Soil	MESKVAKEAERALVEATQRLSPEERLNAFLAHCRLVMELYEAGRKTRTAQPQP
Ga0335075_101777752	3300032896	Soil	MESKVAKEAERALVEATQRLSPEERLNAFLAHCRLVMELYEAGQKARTAQPQP
Ga0299912_101125612	3300033489	Soil	MESKIAKEAERALVDATQRLSPEERVNAFLAHCRLVMDLYEAGQRSRALAKPPQP
Ga0371487_0011135_1891_2058	3300033982	Peat Soil	MESKLAKEAERALVDATQRLSPEGRLNAFLAHCRLVMELHEAGKKMRLRPLRPQS
Ga0372943_0773237_293_460	3300034268	Soil	MESKVAKEAERALVEATQRLSPEERLNAFLAHCRLVMELYEAGQKARSQSAQPQP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F056560

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences