Metagenome / Metatranscriptome Family F056589

Basic Information
Family ID	F056589
Family Type	Metagenome / Metatranscriptome
Number of Sequences	137
Average Sequence Length	64 residues
Representative Sequence	MSLGASAARTSNKLAVQVKKLLTRIYLAFDESQRRRAAAMIHRYRHLIPDYDERSNNENKID
Number of Associated Samples	109
Number of Associated Scaffolds	137

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	34.31 %
% of genes near scaffold ends (potentially truncated)	28.47 %
% of genes from short scaffolds (< 2000 bps)	83.94 %
Associated GOLD sequencing projects	100
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Most Common Taxonomy
Group	Unclassified (53.285 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil (13.869 % of family members)
Environment Ontology (ENVO)	Unclassified (27.007 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (43.066 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 58.89% β-sheet: 0.00% Coil/Unstructured: 41.11%
Feature Viewer

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Pfam ID	Name	% Frequency in 137 Family Scaffolds
PF03401	TctC	22.63
PF00300	His_Phos_1	2.19
PF04392	ABC_sub_bind	1.46
PF13085	Fer2_3	0.73
PF12695	Abhydrolase_5	0.73
PF07859	Abhydrolase_3	0.73
PF02163	Peptidase_M50	0.73
PF02705	K_trans	0.73
PF16868	NMT1_3	0.73
PF04226	Transgly_assoc	0.73
PF03992	ABM	0.73
PF07536	HWE_HK	0.73
PF09361	Phasin_2	0.73
PF00654	Voltage_CLC	0.73
PF06577	EipA	0.73
PF12849	PBP_like_2	0.73
PF02746	MR_MLE_N	0.73
PF09851	SHOCT	0.73
PF13531	SBP_bac_11	0.73
PF13193	AMP-binding_C	0.73
PF10604	Polyketide_cyc2	0.73
PF05853	BKACE	0.73
PF14378	PAP2_3	0.73
PF00561	Abhydrolase_1	0.73

COG ID	Name	Functional Category	% Frequency in 137 Family Scaffolds
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	22.63
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	1.46
COG4948	L-alanine-DL-glutamate epimerase or related enzyme of enolase superfamily	Cell wall/membrane/envelope biogenesis [M]	1.46
COG0038	H+/Cl- antiporter ClcA	Inorganic ion transport and metabolism [P]	0.73
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	0.73
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	0.73
COG3158	K+ uptake protein Kup	Inorganic ion transport and metabolism [P]	0.73
COG3246	Uncharacterized conserved protein, DUF849 family	Function unknown [S]	0.73
COG3920	Two-component sensor histidine kinase, HisKA and HATPase domains	Signal transduction mechanisms [T]	0.73
COG4251	Bacteriophytochrome (light-regulated signal transduction histidine kinase)	Signal transduction mechanisms [T]	0.73

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.28 %
All Organisms	root	All Organisms	46.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.28 %
cellular organisms	root	All Organisms → cellular organisms	46.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.28 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	46.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.28 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	32.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.28 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	18.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.28 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	11.68 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.28 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	6.57 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	0.73 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.28 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5.84 %
Pseudolabrys	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys	0.73 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.28 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1.46 %
unclassified Pseudolabrys	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys	0.73 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.28 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1.46 %
Pseudolabrys sp. FHR47	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47	0.73 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.73 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090015\|GPICI_8996699	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2496	Open in IMG/M
2228664022\|INPgaii200_c1105930	Not Available	1073	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101749392	All Organisms → cellular organisms → Bacteria → Proteobacteria	1175	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101752289	Not Available	551	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10044379	Not Available	1007	Open in IMG/M
3300000816\|AF_2010_repII_A10DRAFT_1012776	Not Available	882	Open in IMG/M
3300000955\|JGI1027J12803_102284566	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300004479\|Ga0062595_100030904	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2201	Open in IMG/M
3300004633\|Ga0066395_10457710	Not Available	728	Open in IMG/M
3300005093\|Ga0062594_102514686	Not Available	566	Open in IMG/M
3300005289\|Ga0065704_10686148	Not Available	567	Open in IMG/M
3300005294\|Ga0065705_10497523	Not Available	781	Open in IMG/M
3300005295\|Ga0065707_10203877	Not Available	1293	Open in IMG/M
3300005330\|Ga0070690_100263239	All Organisms → cellular organisms → Bacteria → Proteobacteria	1224	Open in IMG/M
3300005332\|Ga0066388_100066500	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3876	Open in IMG/M
3300005332\|Ga0066388_100170057	All Organisms → cellular organisms → Bacteria	2778	Open in IMG/M
3300005332\|Ga0066388_100263301	All Organisms → cellular organisms → Bacteria	2365	Open in IMG/M
3300005332\|Ga0066388_100529096	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1811	Open in IMG/M
3300005332\|Ga0066388_101728390	Not Available	1108	Open in IMG/M
3300005332\|Ga0066388_101912591	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47	1060	Open in IMG/M
3300005332\|Ga0066388_102001011	All Organisms → cellular organisms → Bacteria	1038	Open in IMG/M
3300005332\|Ga0066388_103708553	Not Available	780	Open in IMG/M
3300005338\|Ga0068868_100627818	Not Available	954	Open in IMG/M
3300005347\|Ga0070668_100374229	All Organisms → cellular organisms → Bacteria → Proteobacteria	1211	Open in IMG/M
3300005434\|Ga0070709_10001215	All Organisms → cellular organisms → Bacteria → Proteobacteria	14134	Open in IMG/M
3300005438\|Ga0070701_11279965	Not Available	523	Open in IMG/M
3300005455\|Ga0070663_101100321	Not Available	695	Open in IMG/M
3300005457\|Ga0070662_100349576	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1211	Open in IMG/M
3300005526\|Ga0073909_10209015	All Organisms → cellular organisms → Bacteria → Proteobacteria	848	Open in IMG/M
3300005618\|Ga0068864_100887286	Not Available	880	Open in IMG/M
3300005713\|Ga0066905_100005733	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5312	Open in IMG/M
3300005713\|Ga0066905_101836331	Not Available	560	Open in IMG/M
3300005713\|Ga0066905_102171092	Not Available	517	Open in IMG/M
3300005764\|Ga0066903_101574325	Not Available	1245	Open in IMG/M
3300005764\|Ga0066903_101766352	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1180	Open in IMG/M
3300005764\|Ga0066903_105024587	Not Available	701	Open in IMG/M
3300005843\|Ga0068860_102811372	Not Available	504	Open in IMG/M
3300006050\|Ga0075028_100017597	All Organisms → cellular organisms → Bacteria	3099	Open in IMG/M
3300006057\|Ga0075026_100086599	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1535	Open in IMG/M
3300006058\|Ga0075432_10603527	Not Available	502	Open in IMG/M
3300006606\|Ga0074062_11268348	Not Available	802	Open in IMG/M
3300006854\|Ga0075425_100091712	All Organisms → cellular organisms → Bacteria	3446	Open in IMG/M
3300006854\|Ga0075425_100152172	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2651	Open in IMG/M
3300006854\|Ga0075425_100205861	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2261	Open in IMG/M
3300006854\|Ga0075425_102589326	Not Available	561	Open in IMG/M
3300006871\|Ga0075434_101039944	All Organisms → cellular organisms → Bacteria → Proteobacteria	833	Open in IMG/M
3300006904\|Ga0075424_100780565	Not Available	1020	Open in IMG/M
3300007076\|Ga0075435_100235439	Not Available	1556	Open in IMG/M
3300009092\|Ga0105250_10079015	All Organisms → cellular organisms → Bacteria → Proteobacteria	1333	Open in IMG/M
3300009093\|Ga0105240_12580407	Not Available	525	Open in IMG/M
3300009094\|Ga0111539_11363054	Not Available	823	Open in IMG/M
3300009101\|Ga0105247_10467309	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	913	Open in IMG/M
3300009147\|Ga0114129_10125066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3536	Open in IMG/M
3300009147\|Ga0114129_11008819	Not Available	1048	Open in IMG/M
3300009174\|Ga0105241_12124369	Not Available	555	Open in IMG/M
3300009176\|Ga0105242_10986858	All Organisms → cellular organisms → Bacteria → Proteobacteria	849	Open in IMG/M
3300009176\|Ga0105242_11140194	All Organisms → cellular organisms → Bacteria → Proteobacteria	796	Open in IMG/M
3300009177\|Ga0105248_13413352	Not Available	505	Open in IMG/M
3300009792\|Ga0126374_10022896	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2778	Open in IMG/M
3300010043\|Ga0126380_10278836	All Organisms → cellular organisms → Bacteria	1176	Open in IMG/M
3300010046\|Ga0126384_10316312	Not Available	1289	Open in IMG/M
3300010048\|Ga0126373_10249944	All Organisms → cellular organisms → Bacteria	1744	Open in IMG/M
3300010358\|Ga0126370_12059255	Not Available	559	Open in IMG/M
3300010360\|Ga0126372_10094998	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	2221	Open in IMG/M
3300010362\|Ga0126377_12190044	All Organisms → cellular organisms → Bacteria	629	Open in IMG/M
3300010366\|Ga0126379_11190270	Not Available	868	Open in IMG/M
3300010371\|Ga0134125_12123561	Not Available	611	Open in IMG/M
3300010403\|Ga0134123_10192477	All Organisms → cellular organisms → Bacteria → Proteobacteria	1728	Open in IMG/M
3300010868\|Ga0124844_1025167	Not Available	1812	Open in IMG/M
3300010868\|Ga0124844_1061919	Not Available	1353	Open in IMG/M
3300012477\|Ga0157336_1002035	All Organisms → cellular organisms → Bacteria → Proteobacteria	1108	Open in IMG/M
3300012483\|Ga0157337_1003360	Not Available	964	Open in IMG/M
3300012494\|Ga0157341_1022379	Not Available	632	Open in IMG/M
3300012500\|Ga0157314_1041253	Not Available	558	Open in IMG/M
3300012503\|Ga0157313_1007171	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	861	Open in IMG/M
3300012941\|Ga0162652_100109918	Not Available	500	Open in IMG/M
3300012948\|Ga0126375_10717652	All Organisms → cellular organisms → Bacteria	780	Open in IMG/M
3300012948\|Ga0126375_11149618	Not Available	643	Open in IMG/M
3300012951\|Ga0164300_10100403	All Organisms → cellular organisms → Bacteria → Proteobacteria	1269	Open in IMG/M
3300012957\|Ga0164303_10146514	Not Available	1244	Open in IMG/M
3300012958\|Ga0164299_10012377	All Organisms → cellular organisms → Bacteria	3236	Open in IMG/M
3300012961\|Ga0164302_10462170	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	885	Open in IMG/M
3300012971\|Ga0126369_10237384	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1785	Open in IMG/M
3300012987\|Ga0164307_10708016	Not Available	790	Open in IMG/M
3300012988\|Ga0164306_11064329	Not Available	670	Open in IMG/M
3300012989\|Ga0164305_10006297	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5424	Open in IMG/M
3300013307\|Ga0157372_11659758	Not Available	735	Open in IMG/M
3300013307\|Ga0157372_12776021	Not Available	562	Open in IMG/M
3300014325\|Ga0163163_11188612	Not Available	825	Open in IMG/M
3300014968\|Ga0157379_11049368	All Organisms → cellular organisms → Bacteria → Proteobacteria	779	Open in IMG/M
3300014968\|Ga0157379_11904836	Not Available	586	Open in IMG/M
3300015372\|Ga0132256_102359957	Not Available	635	Open in IMG/M
3300015373\|Ga0132257_101218453	Not Available	953	Open in IMG/M
3300015373\|Ga0132257_104264824	Not Available	520	Open in IMG/M
3300015374\|Ga0132255_103938001	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300017944\|Ga0187786_10181072	Not Available	786	Open in IMG/M
3300017947\|Ga0187785_10011247	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	3043	Open in IMG/M
3300018052\|Ga0184638_1169352	Not Available	781	Open in IMG/M
3300018060\|Ga0187765_10024529	All Organisms → cellular organisms → Bacteria	2910	Open in IMG/M
3300018060\|Ga0187765_10052092	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2110	Open in IMG/M
3300018072\|Ga0184635_10176107	Not Available	854	Open in IMG/M
3300018075\|Ga0184632_10247757	Not Available	779	Open in IMG/M
3300018081\|Ga0184625_10226670	Not Available	979	Open in IMG/M
3300018089\|Ga0187774_10742630	Not Available	655	Open in IMG/M
3300021344\|Ga0193719_10034633	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2183	Open in IMG/M
3300021560\|Ga0126371_11179557	Not Available	903	Open in IMG/M
3300024310\|Ga0247681_1048184	Not Available	651	Open in IMG/M
3300025900\|Ga0207710_10093793	All Organisms → cellular organisms → Bacteria → Proteobacteria	1408	Open in IMG/M
3300025900\|Ga0207710_10221190	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	940	Open in IMG/M
3300025900\|Ga0207710_10312385	All Organisms → cellular organisms → Bacteria	796	Open in IMG/M
3300025901\|Ga0207688_10239525	Not Available	1097	Open in IMG/M
3300025920\|Ga0207649_10926315	Not Available	684	Open in IMG/M
3300025926\|Ga0207659_11164509	Not Available	663	Open in IMG/M
3300025972\|Ga0207668_10560321	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	991	Open in IMG/M
3300026023\|Ga0207677_10153737	All Organisms → cellular organisms → Bacteria	1779	Open in IMG/M
3300026116\|Ga0207674_10047046	All Organisms → cellular organisms → Bacteria	4425	Open in IMG/M
3300026142\|Ga0207698_10705968	All Organisms → cellular organisms → Bacteria → Proteobacteria	1004	Open in IMG/M
3300027461\|Ga0207601_115042	Not Available	500	Open in IMG/M
3300027523\|Ga0208890_1034747	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	769	Open in IMG/M
3300027874\|Ga0209465_10112280	All Organisms → cellular organisms → Bacteria	1341	Open in IMG/M
3300027874\|Ga0209465_10667433	Not Available	511	Open in IMG/M
3300027907\|Ga0207428_11018692	Not Available	581	Open in IMG/M
3300031170\|Ga0307498_10000320	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	6067	Open in IMG/M
3300031544\|Ga0318534_10860376	Not Available	508	Open in IMG/M
3300031547\|Ga0310887_10064871	All Organisms → cellular organisms → Bacteria → Proteobacteria	1695	Open in IMG/M
3300031547\|Ga0310887_10214356	All Organisms → cellular organisms → Bacteria → Proteobacteria	1055	Open in IMG/M
3300031747\|Ga0318502_10568484	Not Available	682	Open in IMG/M
3300031892\|Ga0310893_10037163	All Organisms → cellular organisms → Bacteria → Proteobacteria	1547	Open in IMG/M
3300031896\|Ga0318551_10938123	Not Available	506	Open in IMG/M
3300031908\|Ga0310900_11059738	Not Available	669	Open in IMG/M
3300031940\|Ga0310901_10338611	Not Available	641	Open in IMG/M
3300032044\|Ga0318558_10371483	Not Available	710	Open in IMG/M
3300032066\|Ga0318514_10079426	All Organisms → cellular organisms → Bacteria → Proteobacteria	1636	Open in IMG/M
3300032174\|Ga0307470_10181585	All Organisms → cellular organisms → Bacteria	1324	Open in IMG/M
3300032205\|Ga0307472_100210946	All Organisms → cellular organisms → Bacteria	1486	Open in IMG/M
3300032205\|Ga0307472_100985900	Not Available	788	Open in IMG/M
3300033433\|Ga0326726_10488500	Not Available	1177	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	63.50%
Host-Associated	Host-Associated	36.50%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	59.12%
Plants	Host-Associated → Plants	36.50%
Aquatic	Environmental → Aquatic	4.38%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	57.66%
Rhizosphere	Host-Associated → Plants → Rhizosphere	24.09%
Rhizoplane	Host-Associated → Plants → Rhizoplane	11.68%
Sediment	Environmental → Aquatic → Sediment	4.38%
Peat	Environmental → Terrestrial → Peat	0.73%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.73%
Roots	Host-Associated → Plants → Roots	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	37.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	18.98%
Loam	Environmental → Terrestrial → Soil → Loam	16.06%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.76%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.11%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.38%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.92%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.73%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.73%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.44%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	18.98%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	13.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.76%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.11%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.38%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.65%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.65%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.92%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.19%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.19%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.73%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.73%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.73%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	13.87%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.76%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	8.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.38%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	4.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.65%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.65%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	3.65%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.19%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.19%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.19%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.19%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.46%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.46%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.46%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.46%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.46%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.46%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.46%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.46%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.46%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.46%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.46%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.46%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.46%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.73%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.73%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.73%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.73%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.73%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.73%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.73%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090015	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000816	Forest soil microbial communities from Amazon forest - 2010 replicate II A10	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300012477	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.3.yng.040610	Host-Associated	Open in IMG/M
3300012483	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.4.yng.040610	Host-Associated	Open in IMG/M
3300012494	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.yng.030610	Host-Associated	Open in IMG/M
3300012500	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.4.old.080610	Host-Associated	Open in IMG/M
3300012503	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.5.old.080610_R	Host-Associated	Open in IMG/M
3300012941	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t4i015	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024310	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK22	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027461	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-ROWE15-E (SPAdes)	Environmental	Open in IMG/M
3300027523	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPICI_00912530	2088090015	Soil	MSLSVSAARTSNKLAVQFKKLLARIYLAFDESQRRRAAAMIHRYRHLIPDYDENSNDENKIG
INPgaii200_11059304	2228664022	Soil	MSLSVSAARTSNKLAVQFKKLLARIYLAFDESQRRRAAAMIHRYRHLIPDYDENSND
INPhiseqgaiiFebDRAFT_1017493922	3300000364	Soil	VPITAEHVLSVSAARTSHKLAAQFKKILTRIYLAFAESQRRRAAAIIDRYRDLISDYDEKSNNENKIG*
INPhiseqgaiiFebDRAFT_1017522892	3300000364	Soil	MSLVSAPRTSNKLAVQFKKLLARIYLAFDESQRRRAAAMIYRYRHLIPNYDENSNDKNKIG*
AF_2010_repII_A001DRAFT_100443791	3300000793	Forest Soil	KNEAFSQDQMWLVDVSITQNMSIGVSAIRAGNKLAVQFKKLLARIYFAFDESQRRRAAAVIDRYRHLIPDYDENLHGENKIR
AF_2010_repII_A10DRAFT_10127761	3300000816	Forest Soil	VSITQNMSVGVSAARAANKLAVQFKNLLARIYLAIDESQRRKAAAVIDRYRHLIPDYDENSHSENKID*
JGI1027J12803_1022845661	3300000955	Soil	NKLAVQFKKLLARIYLVFDESQRRRAAAMIYRYRHLIPNYDENSNDKNKIG*
Ga0062595_1000309045	3300004479	Soil	VAITQNVSLGASAARTSNRLAVQFKNLLARVYRAFDESQRRRAAAVMDRYRHLIPDDDESSNDRNKIG*
Ga0066395_104577101	3300004633	Tropical Forest Soil	VSITQNMSVGVSAARAGNKLAVQFKNLLARIYLAIDESQRRKAAAVIDRYRHLVPDYDENSHSENKID*
Ga0062594_1025146861	3300005093	Soil	VPIAANMSLGASAARTSNKLAVQVKKLLTRIYLAFDESQRRRATAMIHRYRHLIPDYDERSNN
Ga0065704_106861482	3300005289	Switchgrass Rhizosphere	MSLSVSAARTSNKLAVQFKKLLARIYLAFDESQRRRAAAMIHRYRHLIPDYDENSNDENKIG*
Ga0065705_104975231	3300005294	Switchgrass Rhizosphere	GWWIECQSRQNMSLSVSAARTSNKLAVQFKKLLARIYLAFDESQRRRAAAMIHRYRHLIPDYDENSNDENKIG*
Ga0065707_102038774	3300005295	Switchgrass Rhizosphere	AARTSNRLAVQFKNLLARVYRAFDESQRRRAAAVMDRYRHLIPDDDESSNDRNKIG*
Ga0070690_1002632393	3300005330	Switchgrass Rhizosphere	MSLGDSAARTSSKLVVQVKKLLTRIYLAFDESQRRRAAAMIHRYRHLIPDYDERSNNENKID*
Ga0066388_1000665003	3300005332	Tropical Forest Soil	VAITQNMSLGASAARTSNRLAVQFKNLLARIYRAFDESQRRRAAAVMDQYRHLIPDHDKSSNDRNKIG*
Ga0066388_1001700574	3300005332	Tropical Forest Soil	MSITQNMFTGGSAVRPASNLAARVRILLARIYLAFDESQRRRAAAVIHRYKHLIPDHEKNSNGESKIG*
Ga0066388_1002633012	3300005332	Tropical Forest Soil	MLITQNIALSVSAARAGNKLAVQFRKLLARIYLAFHESQRRRAAAVIDRYSHLIPNYDEDSNDESRIS*
Ga0066388_1005290964	3300005332	Tropical Forest Soil	VSITQNMSIGVSAIRAGNKLAVQFKKLLARIYFAFDESQRRRAAAVIDRYRHLIPDYDENLHGENKIR*
Ga0066388_1017283904	3300005332	Tropical Forest Soil	MSVGVSAARAGNKLAVQFKNLLARIYLAIDESQRRKAAAVIDRYRHLIPDYDENSNGENKVGNGQGIDRILSRRDPCK*
Ga0066388_1019125912	3300005332	Tropical Forest Soil	VPITANMSLGNSAARTSNKLAIRVKKFLLRIYLAFDESQRRRAAEVVHRYRHLIPDYDEKSKKENKID*
Ga0066388_1020010113	3300005332	Tropical Forest Soil	VAITQNMSPDASAARTSSRLAVQFKKLLARIYLAFDESQRRRAVAVIDQYRHLIPDDDENSNDRNKIG*
Ga0066388_1037085532	3300005332	Tropical Forest Soil	VPITANMSLGDSAARTSNRLAVRVKKLLTRIYLAFDESQRRRAAAVIHRYRHLIPDYDETSNNENKTD*
Ga0068868_1006278182	3300005338	Miscanthus Rhizosphere	VPITANMSFGDSAARTSNKLVVQVKKLLTRIYLAFDESQRRRAAAMIHRYRHLIPDYDERSNNENKID*
Ga0070668_1003742293	3300005347	Switchgrass Rhizosphere	VPITANMSLANSAARTRNKLAVQVKKLLTRIYLAFDESQRRRAAVMIHRYRHLILDYDEKSNNENKID*
Ga0070709_1000121515	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VPITANMSLGDSAARTSSKLVVQVKKLLTRIYLAFDESQRRRAAAMIHRYRHLIPDYDERSNNENKID*
Ga0070701_112799651	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	VPITANMSLGDSAARTSSKLVVQVKKLLTRIYLAFDESQRRRAAEMIHRYRHLIPDYDEKSNNENKID*
Ga0070663_1011003213	3300005455	Corn Rhizosphere	VPIAANMSLGASAARTSNKLAVQVKKLLTRIYLAFDESQRRRAAAMIHRYRHLI
Ga0070662_1003495763	3300005457	Corn Rhizosphere	VPITANMSLGDSAARTSSKLVVQVKKLLTRIYLAFDESQRRRAAVMIHRYRHLIPDYDEKSNNENKID*
Ga0073909_102090151	3300005526	Surface Soil	MSLGNSAARTRNKLAVQVKKLLTRIYLAFDESQRRRAAVMIHRYRHLIPDYDEKSNNENKID*
Ga0068864_1008872863	3300005618	Switchgrass Rhizosphere	VPITANMSFGDSAARTSNKLVVQVKKLLTRIYLAFDESQRRRATAMIHRYRHLIPDYDEKSNDKNKIG*
Ga0066905_1000057334	3300005713	Tropical Forest Soil	VAGGLSAAQNISLSVSAARTSNKLAAQFKKTFARIFLAFDESQRRRAVAIIDRYRHLIPDYDENSNDENKID*
Ga0066905_1018363312	3300005713	Tropical Forest Soil	VAITQNMSPGASAARTSSRLAVQFKKLLARIYLAFDESQRRRAAAVIDQYRHLIPDDDENSNDRNKIG*
Ga0066905_1021710921	3300005713	Tropical Forest Soil	MSLSVSAARTSNKLAVQFKKLLARIYLAFDESHRRRAAAMIDQYRHLIPDYDENSNDENKIG*
Ga0066903_1015743253	3300005764	Tropical Forest Soil	VPITANMSLGDSTARSSNRLAVRVKKLLTRIYLAFDESQRRRAAAVIHRYRHLIPDYDETSNNENKTD*
Ga0066903_1017663524	3300005764	Tropical Forest Soil	VAITQNMSPDASAARTSSRLAVQFKKLLARIYLAFDESQRRRAVAVIDQYRHLIPDDDENSNDR
Ga0066903_1050245873	3300005764	Tropical Forest Soil	VSITQNMSVGVSAVRAGNRLAVQFKKILARIYLAFDESQRRRAAAVLDRYRHLIRDDENSNGGR*
Ga0068860_1028113722	3300005843	Switchgrass Rhizosphere	VPITANMSLANSAARTRNKLAVQVKKLLTRIYLAFDESQRRRAAVMIHRYRHLIPDYDEKSNNENKID*
Ga0075028_1000175973	3300006050	Watersheds	MSLNLYATRTSTTLAIRFKKLLAKIYLGLDKSQRQRAAQMIHRYRHLIPDYDEKQMNEDKIG*
Ga0075026_1000865991	3300006057	Watersheds	MSLSVSASRTSNLVVQFKKLLARICLAFDESQRRRAAAVIHRYRHLIPDYDEKSNNENKIG*
Ga0075432_106035271	3300006058	Populus Rhizosphere	MSLSNSAARTRNKLAVQVKKILTRIYLAFDESQRRRAAEMIHRYRHLIPDYDEKSNNENKID*
Ga0074062_112683481	3300006606	Soil	ANMSLGDSAARTSSKLVVQVKKLLTRIYLAFDESQRRRAAAMIHRYRHLIPDYDERSNNENKID*
Ga0075425_1000917124	3300006854	Populus Rhizosphere	MSFGDSAARTSNKLVVQVKKLLTRIYLAFDESQRRRATAMIHRYRHLIPDYDEKSNDKNKIG*
Ga0075425_1001521723	3300006854	Populus Rhizosphere	MSVGGSAARTSNKLAVQVKKLLTRIYLAFDESQRRRAAAMIHRYRHLIPDYDERSNNENKID*
Ga0075425_1002058613	3300006854	Populus Rhizosphere	MSLGNSAARTRNKLAVQVKKILTRIYLAFDESQRRRAAEMIHRYRHLIPDYDEKSNNENKID*
Ga0075425_1025893262	3300006854	Populus Rhizosphere	MSLGASAARTSNKLAVQVKKLLTRIYLAFDESQRRRATAMIHRYRHLIPDYDERSNNENKID*
Ga0075434_1010399441	3300006871	Populus Rhizosphere	MSLGNSADRTRNKLAVQVKKLLTRIYLAFDESQRRRAAVMIHRYRHLIPDYDEKSNNENKID*
Ga0075424_1007805651	3300006904	Populus Rhizosphere	SLNLSATGTSNTLAIQFKKLLARIYLAFDETQRRRAAMMIHRHRHLIPDYDEKS*
Ga0075435_1002354394	3300007076	Populus Rhizosphere	VAITQNVSLGASAASTSNRLAVQFKNLLARVYRAFDESQRRRAAAVMDRYRHLIPDDDESSNDRNKIG*
Ga0105250_100790152	3300009092	Switchgrass Rhizosphere	MSLGNSAARTRNKLAVQVKKLLTRIYLAFDESQRRRATAMIHRYRHLIPDYDERSNNENKID*
Ga0105240_125804071	3300009093	Corn Rhizosphere	MSLGNSAARTRNKLAVQVKKILTRIYLAFDESQRRRAAVMIHRYRHLIPDYDEKSNNENKID*
Ga0111539_113630542	3300009094	Populus Rhizosphere	MSLSVSAARTSNKLAIQFKKLLARIYLAFDESQRRRAAAMIHRYRHLIPDYDENSNDENKIG*
Ga0105247_104673092	3300009101	Switchgrass Rhizosphere	MSLANSAARTRNKLAVQVKKLLTRIYLAFDESQRRRAAVMIHRYRHLIPDYDEKSNNENKID*
Ga0114129_101250665	3300009147	Populus Rhizosphere	MSLNLSATGTSNTLAIPFKKLLTRIYLAFDETQRRRAATLIHRYRHLIPDYDEKS*
Ga0114129_110088193	3300009147	Populus Rhizosphere	MSLSVSAARTSNKLAVQFKKLLARIYLPFDESQRRRAAAMIHRYRHLIPDYDENSNDENKIG*
Ga0105241_121243691	3300009174	Corn Rhizosphere	MSLGASAARTSNKLAVQVKKLLTRIYLAFDESQRRRAAEMIHRYRHLIPDYDEKSNNENKID*
Ga0105242_109868581	3300009176	Miscanthus Rhizosphere	MSLGDSAARTSSKLVVQVKKLLTRIYLAFDESQRRRAAAMIHRYRHLIPDYD
Ga0105242_111401941	3300009176	Miscanthus Rhizosphere	MSLANSAARTRNKLAVQVKKLLTRIYLAFDESQRRRAAAMIHRYRHLIPDY
Ga0105248_134133521	3300009177	Switchgrass Rhizosphere	MSFGDSAARTSNKLVVQVKKLLTRIYLAFDESQRRRATAMIHRYRHLIPDYDEKSNEKHKHG*
Ga0126374_100228961	3300009792	Tropical Forest Soil	MSVGVSAVRAGNRLAVQFKKILARIYLAFDESQRRRAAAVLDRYRHLIRDDENSNGGR*
Ga0126380_102788363	3300010043	Tropical Forest Soil	MPIAQDMSLSFSAARTGNRLATQLKKLLARIYLAFDESQRRRAAAVIARYRHLIPDESP
Ga0126384_103163122	3300010046	Tropical Forest Soil	MSIGVSAIRAVNKLAVQFKKLLARIYFAFDESQRRRAAAVIDRYRHLIPDYDENLHGENKIR*
Ga0126373_102499443	3300010048	Tropical Forest Soil	MSIGVSAIRAGNKLAVQFKKLLARIYFAFDESQRRRAAAVIDRYRHLIPDYDENLHGENKIR*
Ga0126370_120592552	3300010358	Tropical Forest Soil	MSLSVSAARTSNKLAVQFRKLLARIYLAFHESQRRRAAAVIDRYRHLIPDYDENSNGENKVGNG
Ga0126372_100949985	3300010360	Tropical Forest Soil	RTRSKLAIRVKKILTRIYLAFDESQRRRAAEVVHRYRHLIPDYDETSKKENKID*
Ga0126377_121900443	3300010362	Tropical Forest Soil	MSIGVSAVRAGNKLAVQFKTLLARIYLAIDESQRRKAAAVIDRYRHLIPDYDE
Ga0126379_111902702	3300010366	Tropical Forest Soil	MSIGVSAVRAGNKLAVQFKTLLARIYLAIDESQRRKAAAVIDRYRHLIPDYDENSNGEDKVGNGQGIDRILSRRDPCK*
Ga0134125_121235613	3300010371	Terrestrial Soil	ANMSLANSAARTRNKLAVQVKKLLTRIYLAFDESQRRRAAVMIHRYRHLIPDYDEKSNNENKID*
Ga0134123_101924773	3300010403	Terrestrial Soil	MSLGDSAARTSSKLVVQVKKLLTRIYLAFDESQRRRAAAMIHRYRHLIPDYDEQSNNENKID*
Ga0124844_10251676	3300010868	Tropical Forest Soil	AARTSSRLAVQFKKLLARIYLAFDESQRRRAAAVIDQYRHLIPDDDENSNDRNKIG*
Ga0124844_10619191	3300010868	Tropical Forest Soil	MSPDASAARTSSRLAVQFKKLLARIYLAFDESQRRRAVAVIDQYRHLIPDDDENSNDRNKIG*
Ga0157336_10020353	3300012477	Arabidopsis Rhizosphere	MSLGNSAARTRNKLAVQVKKILTRIYLAFDESQRRRAAAMIHRYRHLIPDYDERSNNENKID*
Ga0157337_10033602	3300012483	Arabidopsis Rhizosphere	MSLGDSAARTSSKLVVQVKKLLTRIYLAFDESQRRRAAEMIHRYRHLIPDYDEKSNNENKID*
Ga0157341_10223792	3300012494	Arabidopsis Rhizosphere	MSFGDSAARTSNKLVVQVKKLLTRIYLAFDESQRRRAAAMIHRYRHLIPDYDERSNNENKID*
Ga0157314_10412531	3300012500	Arabidopsis Rhizosphere	VPITANMSLGNSADRTRNKLAVQVKKLLTRIYLAFDESQRRRAAVMIHRYRHLIPDYDEKSNNENKID*
Ga0157313_10071712	3300012503	Arabidopsis Rhizosphere	VLITAKMSLNDSAACTSNKLALQLRKFFARIYLASDESQRRRAAAMIHRYRHLIPDYDEKSNNENKID*
Ga0162652_1001099182	3300012941	Soil	MSLSVSAARTSNRLAVRFKKLLARIYLAFDESQRRRAAAMIHRYRHLIPDYDENSNDENKIG*
Ga0126375_107176522	3300012948	Tropical Forest Soil	MSLSVSAARTSNKLAVQFKKLLARIYLAFDESHRRRAAAMIDQYRHLIPDYDENSNDENKID*
Ga0126375_111496181	3300012948	Tropical Forest Soil	MSIGVSAVRAGNKLAVQFKTLLARIYLAIDESQRRKAAAVIDRYRHLIPDYDENSNGENKVGNGQGIDRILSRRDPCK*
Ga0164300_101004033	3300012951	Soil	MSVGGSAARTSNKLAVQVKKLLTRIYLAFDESQRRRAAVMIHRYRHLIPDYDEKSNNENKID*
Ga0164303_101465143	3300012957	Soil	VAITQNMSLGASAARTSNRLAVQFKNLLARIYRAFDESQRRRAAAVMDRYRHLIPDDDESSNDRNKIG*
Ga0164299_100123772	3300012958	Soil	MSLGNSAARTRNKLAVQVKKLLTRIYLAFDESQRRRAAAMIHRYRHLIPDYDERSNNENKID*
Ga0164302_104621702	3300012961	Soil	VAITQNMSLGASAARTSNRLAVQFKNLWARIYRAFDESQRRRAAAVMDRYRHLIPDDDESSNDRNKIG*
Ga0126369_102373844	3300012971	Tropical Forest Soil	MSVGVSAARAGNKLAVQFKNLLARIYLAIDESQRRKAAAVIDRYRHLIPDYDENSHSENKID*
Ga0164307_107080162	3300012987	Soil	VAITQNVSLGASAARTSNRLAVQFKNLLARIYRAFDESQRRRAAAVMDRYRHLIPDDDESSNDRNKIG*
Ga0164306_110643292	3300012988	Soil	VAITQNMSLSAIAARTSNRLAVQFKNLLARVYRAFDESQRRRAAAVMDRYRHLIPDDDESSNDRNKIG*
Ga0164305_100062972	3300012989	Soil	VPITANISLGDSAARTSSNLAVQVKKLLTRIYLAFDESQRRRAAAMIHRYRHLIPDYDERSNNENKID*
Ga0157372_116597583	3300013307	Corn Rhizosphere	MSLANSAARTRNKLAVQVKKLLTRIYLAFDESQRRRAAEMIHRYRHLIPDYDEKSNNENKID*
Ga0157372_127760212	3300013307	Corn Rhizosphere	MSFGDSAARTSNKLVVQVKKLLTRIYLAFDESQRRRATAMIHRYRHLIPDYDERSNNENKID*
Ga0163163_111886123	3300014325	Switchgrass Rhizosphere	TANMSLSNSAARTRNKLAVQVKKILTRIYLAFDESQRRRAAEMIHRYRHLIPDYDEKSNNENKID*
Ga0157379_110493683	3300014968	Switchgrass Rhizosphere	MSLGDSAARTSSKLVVQVKKLLTRIYLAFDESQRRRAAAMIHRYRHLIPDYDERSNNENK
Ga0157379_119048362	3300014968	Switchgrass Rhizosphere	MSLGASAARTSNKLAVQVKKLLTRIYLAFDESQRRRAAAMIHRYRHLIPDYDERSNNENK
Ga0132256_1023599571	3300015372	Arabidopsis Rhizosphere	VPITANMSLGNSAARTRNKLAVQVKKLLTRIYLAFDESQRRRAAVMIHRYRHLIPDYDEKSNNENKID*
Ga0132257_1012184533	3300015373	Arabidopsis Rhizosphere	VPITANMSLGNSAARTRNKLAVQVKKLLTRIYLAFDESQRRRAAVMIHRYRHLIPDYDEKSNNENKIN*
Ga0132257_1042648242	3300015373	Arabidopsis Rhizosphere	SAARTRNKLAVQVKKILTRIYLAFDESQRRRAAEMIHRYRHLIPDYDEKSNNENKID*
Ga0132255_1039380011	3300015374	Arabidopsis Rhizosphere	NMSFGDSAARTSNKLVVQVKKLLTRIYLAFDESQRRRATAMIHRYRHLIPDYDEKSNDKNKIG*
Ga0187786_101810723	3300017944	Tropical Peatland	MSLGNSATRTSNKLAIRVKKILTRIYLAFDESQRRRAAEVVHRYRHLIPDYDETSKKENKID
Ga0187785_100112474	3300017947	Tropical Peatland	MSLGNSAARTRSKLAIWAKKILTRIYLAFDESQRRRAAEVVHRYRHLIPDYDESSKKENKID
Ga0184638_11693522	3300018052	Groundwater Sediment	MSLNISAAQTSNKPAIQFKKLLARIYLAFDESQRRRADAMIYRYRHLIPDCDDKLDNENKIG
Ga0187765_100245292	3300018060	Tropical Peatland	MSLGNSAARTRSKLAIRVKKILTRIYLAFDESQRRRAAEVVHRYRHLIPDYDESSKKENKID
Ga0187765_100520924	3300018060	Tropical Peatland	MSLGNSATRTSNKLAIRVKKLLLRIYLAFDESQRRRAAEVVHRYRHLIPDYDE
Ga0184635_101761071	3300018072	Groundwater Sediment	MSLSVSAARTSNRLAVQFKKLLARIYLAFDESQRRRAAAMIHRYRHLIPDYDENSNDENKIG
Ga0184632_102477571	3300018075	Groundwater Sediment	PRKNMSLNISAAQTSNKPAIQLKKLLARIYLAFEESQRRRADAMIYRYRHLIPDCDDKLDNENKIG
Ga0184625_102266702	3300018081	Groundwater Sediment	MSLSVSAARWSNRLAVQFKKLLARIYLAFDESQRRRAAAMIHRYRHLIPDYDENSNDENKIG
Ga0187774_107426301	3300018089	Tropical Peatland	MSLNLSATRTSNTLAIRFKKLLARIYLALDESQRQRAAQMIHRYRHLIPDYDEKSNERKTRSANGQRSF
Ga0193719_100346331	3300021344	Soil	MSLNLSANRSSNKPAIQFKKLLGRIYLGFDESQIRRSAAIIDRYRHLIPNYDEKNRKKIG
Ga0126371_111795573	3300021560	Tropical Forest Soil	MSVGVSAVRAGNRLAVQFKKILARIYLAFDESQRRRAAAVLDRYRHLIRDDENSNGGR
Ga0247681_10481842	3300024310	Soil	GDSAARTSSKLVVQVKKLLTRIYLAFDESQRRRAAAMIHRYRHLIPDYDERSNNENKID
Ga0207710_100937932	3300025900	Switchgrass Rhizosphere	MSLGNSAARTRNKLAVQVKKILTRIYLAFDESQRRRAAEMIHRYRHLIPDYDEKSNNENKID
Ga0207710_102211901	3300025900	Switchgrass Rhizosphere	MSLANSAARTRNKLAVQVKKLLTRIYLAFDESQRRRAAVMIHRYRHLIPDYDEKSNNENKID
Ga0207710_103123852	3300025900	Switchgrass Rhizosphere	MSFGDSAARTSNKLVVQVKKLLTRIYLAFDESQRRRATAMIHRYRHLIPDYDEKSNDKNKIG
Ga0207688_102395252	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MSFGDSAARTSNKLVVQVKKLLTRIYLAFDESQRRRAAAMIHRYRHLIPDYDERSNNENKID
Ga0207649_109263151	3300025920	Corn Rhizosphere	NMSLSNSAARTRNKLAVQVKKILTRIYLAFDESQRRRAAEMIHRYRHLIPDYDEKSNNENKID
Ga0207659_111645091	3300025926	Miscanthus Rhizosphere	VAITQNVSLGASAARTSNRLAVQFKNLLARVYRAFDESQRRRAAAVMDRYRHLIPDDD
Ga0207668_105603212	3300025972	Switchgrass Rhizosphere	MSLANSAARTRNKLAVQVKKLLTRIYLAFDESQRRRAAAMIHRYRHLIPDYDERSNNENKID
Ga0207677_101537371	3300026023	Miscanthus Rhizosphere	SAARTSSKLVVQVKKLLTRIYLAFDESQRRRAAAMIHRYRHLIPDYDERSNNENKID
Ga0207674_100470466	3300026116	Corn Rhizosphere	RTSNKLAVQVKKLLTRIYLAFDESQRRRATAMIHRYRHLIPDYDERSNNENKID
Ga0207698_107059681	3300026142	Corn Rhizosphere	ANMSLGDSAARTSSKLVVQVKKLLTRIYLAFDESQRRRAAAMIHRYRHLIPDYDERSNNENKID
Ga0207601_1150421	3300027461	Soil	VPITANMSLGDSAARTSSKLVVQVKKLLTRIYLAFDESQRRRAAVMIHRYRHLIPDYDEKSNNENKIN
Ga0208890_10347473	3300027523	Soil	MSLSVSASRTSNLVVQFKKLLARICLAFDESQRRRAAALIHRYRHLIPDYDERSNNENKI
Ga0209465_101122801	3300027874	Tropical Forest Soil	MSVGVSAARAGNKLAVQFKNLLARIYLAIDESQRRKAAAVIDRYRHLVPDYDENSHSENKID
Ga0209465_106674332	3300027874	Tropical Forest Soil	VSITQNMSIGVSAIRAGNKLAVQFKKLLARIYFAFDESQRRRAAAVIDRYRHLIPDYDENLHGENKIR
Ga0207428_110186922	3300027907	Populus Rhizosphere	VPITANMSLSNSAARTRNKLAVQVKKILTRIYLAFDESQRRRAAEMIHRYRHLIPDYDEKSNNENKID
Ga0307498_100003204	3300031170	Soil	MSLGNSAARTRNKLAVQVKKLLTRIYLAFDESQRRRAAVMIHRYRHLIPDYDEKSNNENKID
Ga0318534_108603762	3300031544	Soil	VSITQNTSVGVSAVRAGNKLAVQFKNLLARIYLAIDESQRRKAAAVIDRYRHLIPDYDENSHGENKID
Ga0310887_100648713	3300031547	Soil	MSLGNSADRTRNKLAVQVKKLLTRIYLAFDESQRRRAAVMIHRYRHLIPDYDEKSNNENKID
Ga0310887_102143563	3300031547	Soil	MSVGGSAARTSNKLAVQVKKLLTRIYLAFDESQRRRAAAMIHRYRHLIPDYDERSNNENKID
Ga0318502_105684842	3300031747	Soil	VSITQNTSVGVSAVRAGNKLAVQFKNLLARIYLAIDESQRRKAAAVMDRYRHLIPDYDENSHGENKID
Ga0310893_100371633	3300031892	Soil	MSLGNSAARTRNKLAVQVKKLLTRIYLAFDESQRRRAAAMIHRYRHLIPDYDERSNNENKID
Ga0318551_109381232	3300031896	Soil	SAVRAGNKLAVQFKNLLARIYLAIDESQRRKAAAVIDRYRHLIPDYDENSHGENKID
Ga0310900_110597381	3300031908	Soil	MSLGASAARTSNKLAVQVKKLLTRIYLAFDESQRRRAAAMIHRYRHLIPDYDERSNNENKID
Ga0310901_103386112	3300031940	Soil	VPITANMSLGNSAARTRNKLAVQVKKLLTRIYLAFDESQRRRAAVMIHRYRHLIPDYDEKSNNENKID
Ga0318558_103714831	3300032044	Soil	VSITQNTSVGVSAVRAGNKLAVQFKNLLARIYLAIDESQRRKAAAVIDRYRHLIPDYDENSHGENK
Ga0318514_100794261	3300032066	Soil	ITQNTSVGVSAVRAGNKLAVQFKNLLARIYLAIDESQRRKAAAVIDRYRHLIPDYDENSHGENKID
Ga0307470_101815853	3300032174	Hardwood Forest Soil	MSLSVSASHKSNKLAVQVKKLLARIYLAFDESQRRRAAVMIHRYRHLIPDYDEKSNNENKID
Ga0307472_1002109463	3300032205	Hardwood Forest Soil	NMSLGDSAARTSSKLVVQVKKLLTRIYLAFDESQRRRAAAMIHRYRHLIPDYDERSNNENKID
Ga0307472_1009859003	3300032205	Hardwood Forest Soil	VAITQNMSLGASAARTSNRLAVQFKNLLARVYRAFDESQRRRAAAVMDRYRHLIPDDDESSNDRNKIG
Ga0326726_104885002	3300033433	Peat Soil	MSFNLSATRTSNTLAIRFKQLLARIYLAFDETQRRRAAQMIHRYRHLIPDYGEKSNERKQ

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F056589

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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