Metagenome / Metatranscriptome Family F056725

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F056725
Family Type	Metagenome / Metatranscriptome
Number of Sequences	137
Average Sequence Length	66 residues
Representative Sequence	MQTRSRRRLLALVLAAVAVGLVVVEPFPKGRVLLSLTSTHGVDAGDLPAFALLLVAAGLV
Number of Associated Samples	100
Number of Associated Scaffolds	137

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	42.22 %
% of genes near scaffold ends (potentially truncated)	23.36 %
% of genes from short scaffolds (< 2000 bps)	81.75 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (56.204 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (35.766 % of family members)
Environment Ontology (ENVO)	Unclassified (37.956 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.985 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 47.73% β-sheet: 0.00% Coil/Unstructured: 52.27%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 137 Family Scaffolds
PF11746	DUF3303	12.41
PF01243	Putative_PNPOx	3.65
PF13424	TPR_12	3.65
PF07336	ABATE	3.65
PF12706	Lactamase_B_2	2.92
PF00353	HemolysinCabind	2.19
PF05199	GMC_oxred_C	1.46
PF02113	Peptidase_S13	1.46
PF03793	PASTA	1.46
PF04020	Phage_holin_4_2	1.46
PF13439	Glyco_transf_4	0.73
PF09643	YopX	0.73
PF05721	PhyH	0.73
PF00535	Glycos_transf_2	0.73
PF13464	DUF4115	0.73
PF13784	Fic_N	0.73
PF00656	Peptidase_C14	0.73
PF08031	BBE	0.73
PF00664	ABC_membrane	0.73
PF07589	PEP-CTERM	0.73
PF11716	MDMPI_N	0.73
PF13374	TPR_10	0.73
PF12697	Abhydrolase_6	0.73
PF00291	PALP	0.73
PF06072	Herpes_US9	0.73
PF10103	Zincin_2	0.73
PF12867	DinB_2	0.73

COG ID	Name	Functional Category	% Frequency in 137 Family Scaffolds
COG5516	Uncharacterized conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding	General function prediction only [R]	3.65
COG1950	Uncharacterized membrane protein YvlD, DUF360 family	Function unknown [S]	1.46
COG2027	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	1.46
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	1.46
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	0.73
COG4249	Uncharacterized conserved protein, contains caspase domain	General function prediction only [R]	0.73
COG5285	Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) family	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.73

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.20 %
All Organisms	root	All Organisms	43.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.20 %
cellular organisms	root	All Organisms → cellular organisms	43.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.20 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	43.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.20 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	27.74 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.73 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.20 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	27.01 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.73 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.20 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	22.63 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.73 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.20 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	7.30 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.46 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	0.73 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.73 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.73 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.73 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.73 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.20 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	3.65 %
Propionibacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae	2.19 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.46 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.73 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.73 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.73 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.73 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.73 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.20 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.46 %
unclassified Nocardioidaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → unclassified Nocardioidaceae	0.73 %
unclassified Propionibacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → unclassified Propionibacteriaceae	0.73 %
Raineyella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Raineyella	0.73 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	0.73 %
Actinoplanes	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	0.73 %
Microlunatus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus	0.73 %
Friedmanniella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Friedmanniella	0.73 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.73 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.73 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.73 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.73 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.20 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.46 %
unclassified Actinoplanes	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → unclassified Actinoplanes	0.73 %
Nocardioidaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → unclassified Nocardioidaceae → Nocardioidaceae bacterium	0.73 %
Propionibacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → unclassified Propionibacteriaceae → Propionibacteriaceae bacterium	0.73 %
Microlunatus phosphovorus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → Microlunatus phosphovorus	0.73 %
Raineyella fluvialis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Raineyella → Raineyella fluvialis	0.73 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	0.73 %
Friedmanniella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Friedmanniella	0.73 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.73 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.73 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.73 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.73 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.20 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.46 %
Actinoplanes sp. M4I6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → unclassified Actinoplanes → Actinoplanes sp. M4I6	0.73 %
Nocardioidaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → unclassified Nocardioidaceae → Nocardioidaceae bacterium	0.73 %
Propionibacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → unclassified Propionibacteriaceae → Propionibacteriaceae bacterium	0.73 %
Microlunatus phosphovorus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → Microlunatus phosphovorus	0.73 %
Raineyella fluvialis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Raineyella → Raineyella fluvialis	0.73 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	0.73 %
Friedmanniella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Friedmanniella	0.73 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.73 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.73 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.73 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.73 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.73 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2140918013\|NODE_8729_length_1019_cov_5.728165	Not Available	1051	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_11051224	Not Available	1013	Open in IMG/M
3300000559\|F14TC_101357167	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → Microlunatus phosphovorus	1582	Open in IMG/M
3300000890\|JGI11643J12802_11297754	Not Available	568	Open in IMG/M
3300000956\|JGI10216J12902_115333674	Not Available	1006	Open in IMG/M
3300004114\|Ga0062593_102082979	Not Available	632	Open in IMG/M
3300004157\|Ga0062590_100791255	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	870	Open in IMG/M
3300004463\|Ga0063356_100835353	Not Available	1290	Open in IMG/M
3300004463\|Ga0063356_100926046	Not Available	1234	Open in IMG/M
3300004480\|Ga0062592_100435037	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1058	Open in IMG/M
3300006196\|Ga0075422_10122827	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1016	Open in IMG/M
3300006876\|Ga0079217_10843274	Not Available	644	Open in IMG/M
3300006881\|Ga0068865_100376094	All Organisms → cellular organisms → Bacteria	1157	Open in IMG/M
3300007004\|Ga0079218_12968412	Not Available	571	Open in IMG/M
3300009094\|Ga0111539_10064257	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4342	Open in IMG/M
3300009094\|Ga0111539_12981543	Not Available	547	Open in IMG/M
3300009098\|Ga0105245_10752888	Not Available	1010	Open in IMG/M
3300009148\|Ga0105243_12780872	Not Available	530	Open in IMG/M
3300009156\|Ga0111538_10165212	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2811	Open in IMG/M
3300009789\|Ga0126307_10144351	Not Available	1903	Open in IMG/M
3300009789\|Ga0126307_10242074	All Organisms → cellular organisms → Bacteria	1450	Open in IMG/M
3300009789\|Ga0126307_10442263	Not Available	1049	Open in IMG/M
3300009840\|Ga0126313_10207615	Not Available	1505	Open in IMG/M
3300009840\|Ga0126313_10426308	Not Available	1055	Open in IMG/M
3300010036\|Ga0126305_10173519	Not Available	1354	Open in IMG/M
3300010036\|Ga0126305_10521037	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	794	Open in IMG/M
3300010037\|Ga0126304_10704381	Not Available	682	Open in IMG/M
3300010038\|Ga0126315_10014315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	3841	Open in IMG/M
3300010038\|Ga0126315_10710542	Not Available	656	Open in IMG/M
3300010040\|Ga0126308_10176629	Not Available	1362	Open in IMG/M
3300010041\|Ga0126312_10023661	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4101	Open in IMG/M
3300010041\|Ga0126312_10329666	Not Available	1080	Open in IMG/M
3300010042\|Ga0126314_10062643	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2450	Open in IMG/M
3300010044\|Ga0126310_11584085	Not Available	540	Open in IMG/M
3300010045\|Ga0126311_10772238	Not Available	773	Open in IMG/M
3300010166\|Ga0126306_10414187	All Organisms → cellular organisms → Bacteria	1055	Open in IMG/M
3300012198\|Ga0137364_10521852	Not Available	893	Open in IMG/M
3300012212\|Ga0150985_118555424	All Organisms → cellular organisms → Bacteria	1188	Open in IMG/M
3300012469\|Ga0150984_100451149	All Organisms → cellular organisms → Bacteria → Proteobacteria	2435	Open in IMG/M
3300012469\|Ga0150984_119854707	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → unclassified Propionibacteriaceae → Propionibacteriaceae bacterium	2110	Open in IMG/M
3300012469\|Ga0150984_122620255	All Organisms → cellular organisms → Bacteria	995	Open in IMG/M
3300012896\|Ga0157303_10130428	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → unclassified Nocardioidaceae → Nocardioidaceae bacterium	650	Open in IMG/M
3300012898\|Ga0157293_10091436	Not Available	767	Open in IMG/M
3300012907\|Ga0157283_10088686	Not Available	804	Open in IMG/M
3300012908\|Ga0157286_10007714	Not Available	2000	Open in IMG/M
3300012908\|Ga0157286_10022212	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1400	Open in IMG/M
3300012914\|Ga0157297_10159512	Not Available	744	Open in IMG/M
3300012939\|Ga0162650_100009740	Not Available	1228	Open in IMG/M
3300013307\|Ga0157372_11555640	Not Available	762	Open in IMG/M
3300014497\|Ga0182008_10984231	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300015371\|Ga0132258_10208749	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4742	Open in IMG/M
3300015371\|Ga0132258_10262919	All Organisms → cellular organisms → Bacteria	4225	Open in IMG/M
3300015371\|Ga0132258_10287113	All Organisms → cellular organisms → Bacteria → Terrabacteria group	4041	Open in IMG/M
3300015371\|Ga0132258_10937843	Not Available	2186	Open in IMG/M
3300015371\|Ga0132258_10959945	Not Available	2159	Open in IMG/M
3300015372\|Ga0132256_100504859	Not Available	1320	Open in IMG/M
3300015372\|Ga0132256_100711483	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → unclassified Actinoplanes → Actinoplanes sp. M4I6	1120	Open in IMG/M
3300015372\|Ga0132256_103149394	Not Available	555	Open in IMG/M
3300015373\|Ga0132257_100949340	Not Available	1080	Open in IMG/M
3300015374\|Ga0132255_101295516	Not Available	1099	Open in IMG/M
3300017965\|Ga0190266_10350644	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	795	Open in IMG/M
3300017965\|Ga0190266_11095297	Not Available	542	Open in IMG/M
3300017997\|Ga0184610_1095778	Not Available	936	Open in IMG/M
3300018028\|Ga0184608_10010298	All Organisms → cellular organisms → Bacteria	3167	Open in IMG/M
3300018028\|Ga0184608_10367000	Not Available	630	Open in IMG/M
3300018031\|Ga0184634_10054256	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1666	Open in IMG/M
3300018061\|Ga0184619_10042303	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1960	Open in IMG/M
3300018073\|Ga0184624_10202088	All Organisms → cellular organisms → Bacteria	886	Open in IMG/M
3300018469\|Ga0190270_11273878	Not Available	777	Open in IMG/M
3300018469\|Ga0190270_12175341	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300018476\|Ga0190274_11756369	Not Available	715	Open in IMG/M
3300018481\|Ga0190271_10933937	Not Available	992	Open in IMG/M
3300019356\|Ga0173481_10523374	Not Available	609	Open in IMG/M
3300019767\|Ga0190267_10349777	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	796	Open in IMG/M
3300021951\|Ga0222624_1509969	Not Available	510	Open in IMG/M
3300022534\|Ga0224452_1126179	Not Available	787	Open in IMG/M
3300022694\|Ga0222623_10141249	Not Available	938	Open in IMG/M
3300022756\|Ga0222622_10185474	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	1370	Open in IMG/M
3300025901\|Ga0207688_10148435	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1383	Open in IMG/M
3300025927\|Ga0207687_10511658	Not Available	1003	Open in IMG/M
3300025961\|Ga0207712_11615773	All Organisms → cellular organisms → Bacteria → Acidobacteria	581	Open in IMG/M
3300027718\|Ga0209795_10120336	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	746	Open in IMG/M
3300027907\|Ga0207428_10024345	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5084	Open in IMG/M
3300028704\|Ga0307321_1025623	Not Available	1054	Open in IMG/M
3300028704\|Ga0307321_1096459	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300028707\|Ga0307291_1004717	All Organisms → cellular organisms → Bacteria	2914	Open in IMG/M
3300028710\|Ga0307322_10101381	Not Available	740	Open in IMG/M
3300028712\|Ga0307285_10115323	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300028712\|Ga0307285_10201430	Not Available	557	Open in IMG/M
3300028718\|Ga0307307_10175967	Not Available	673	Open in IMG/M
3300028721\|Ga0307315_10000357	All Organisms → cellular organisms → Bacteria	10418	Open in IMG/M
3300028721\|Ga0307315_10059251	All Organisms → cellular organisms → Bacteria	1078	Open in IMG/M
3300028721\|Ga0307315_10121634	Not Available	779	Open in IMG/M
3300028722\|Ga0307319_10069374	All Organisms → cellular organisms → Bacteria	1115	Open in IMG/M
3300028722\|Ga0307319_10187567	Not Available	675	Open in IMG/M
3300028744\|Ga0307318_10035484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1636	Open in IMG/M
3300028744\|Ga0307318_10053131	Not Available	1343	Open in IMG/M
3300028744\|Ga0307318_10261396	Not Available	604	Open in IMG/M
3300028754\|Ga0307297_10034789	Not Available	1499	Open in IMG/M
3300028755\|Ga0307316_10393197	Not Available	513	Open in IMG/M
3300028778\|Ga0307288_10254920	Not Available	688	Open in IMG/M
3300028787\|Ga0307323_10273897	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	607	Open in IMG/M
3300028796\|Ga0307287_10124253	Not Available	977	Open in IMG/M
3300028799\|Ga0307284_10132545	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	952	Open in IMG/M
3300028810\|Ga0307294_10148100	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	780	Open in IMG/M
3300028810\|Ga0307294_10350965	Not Available	546	Open in IMG/M
3300028814\|Ga0307302_10011548	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3963	Open in IMG/M
3300028819\|Ga0307296_10483299	Not Available	678	Open in IMG/M
3300028876\|Ga0307286_10065169	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	1250	Open in IMG/M
3300028878\|Ga0307278_10222343	Not Available	840	Open in IMG/M
3300028880\|Ga0307300_10062053	All Organisms → cellular organisms → Bacteria	1076	Open in IMG/M
3300028885\|Ga0307304_10045106	Not Available	1612	Open in IMG/M
3300030496\|Ga0268240_10152186	Not Available	571	Open in IMG/M
3300030902\|Ga0308202_1014726	All Organisms → cellular organisms → Bacteria	1151	Open in IMG/M
3300030993\|Ga0308190_1013181	All Organisms → cellular organisms → Bacteria	1247	Open in IMG/M
3300031091\|Ga0308201_10197356	Not Available	663	Open in IMG/M
3300031091\|Ga0308201_10362446	Not Available	535	Open in IMG/M
3300031092\|Ga0308204_10027849	All Organisms → cellular organisms → Bacteria	1228	Open in IMG/M
3300031548\|Ga0307408_100005920	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Friedmanniella	8144	Open in IMG/M
3300031548\|Ga0307408_100097747	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Raineyella → Raineyella fluvialis	2231	Open in IMG/M
3300031548\|Ga0307408_100292236	Not Available	1361	Open in IMG/M
3300031852\|Ga0307410_10860185	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	775	Open in IMG/M
3300031852\|Ga0307410_10898999	Not Available	758	Open in IMG/M
3300031901\|Ga0307406_10036311	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3035	Open in IMG/M
3300031901\|Ga0307406_11307474	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	633	Open in IMG/M
3300031903\|Ga0307407_11222831	Not Available	587	Open in IMG/M
3300031995\|Ga0307409_100002033	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	10380	Open in IMG/M
3300031995\|Ga0307409_101413815	Not Available	722	Open in IMG/M
3300032002\|Ga0307416_100360229	Not Available	1476	Open in IMG/M
3300032002\|Ga0307416_100431119	Not Available	1365	Open in IMG/M
3300032002\|Ga0307416_102862382	Not Available	577	Open in IMG/M
3300032004\|Ga0307414_12269759	Not Available	507	Open in IMG/M
3300032174\|Ga0307470_11028723	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	657	Open in IMG/M
3300034172\|Ga0334913_006952	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2928	Open in IMG/M
3300034174\|Ga0334932_024799	Not Available	1010	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	67.88%
Host-Associated	Host-Associated	32.12%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	59.85%
Plants	Host-Associated → Plants	32.12%
Aquatic	Environmental → Aquatic	8.03%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	59.12%
Rhizosphere	Host-Associated → Plants → Rhizosphere	22.63%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.76%
Sediment	Environmental → Aquatic → Sediment	6.57%
Freshwater	Environmental → Aquatic → Freshwater	1.46%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.73%
Phylloplane	Host-Associated → Plants → Phylloplane	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	58.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	18.25%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.57%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	5.84%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.38%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.92%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.46%
Loam	Environmental → Terrestrial → Soil → Loam	0.73%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.73%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	49.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	18.25%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.57%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	5.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.38%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.65%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.92%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.46%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	1.46%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.73%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.73%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.73%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	35.77%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	12.41%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	10.22%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	5.11%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	4.38%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.92%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.19%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.19%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.19%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	2.19%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	2.19%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.46%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.46%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	1.46%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.73%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.73%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.73%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.73%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.73%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.73%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.73%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.73%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.73%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.73%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	0.73%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2140918013	Soil microbial communities from Great Prairies - Iowa soil (MSU Assemblies)	Environmental	Open in IMG/M
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012896	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2	Environmental	Open in IMG/M
3300012898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S194-509B-1	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012939	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t1i015	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300021951	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022195	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027718	Agave microbial communities from Guanajuato, Mexico - Or.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028704	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_379	Environmental	Open in IMG/M
3300028707	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148	Environmental	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300028712	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028754	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028810	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300030496	Bulk soil microbial communities from Mexico - Penjamo (Pe) metaG (v2)	Environmental	Open in IMG/M
3300030902	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_356 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030993	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_185 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031091	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300034172	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 9HMS	Environmental	Open in IMG/M
3300034174	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 28HNS	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Iowa-Corn-GraphCirc_02597240	2140918013	Soil	MSRPIQTRRRRLQALVLAAVAIGLAVIEPFPKGAVLLSLTATHGVDVGDLPALALLLVAACLAI
ICChiseqgaiiFebDRAFT_110512241	3300000363	Soil	MSRPTPTRRRRRLLALALAAVAIGLVIVEPFPKGEVLFSLTHTHGVDTGDVPALAMLLVAAYLAV*
F14TC_1013571672	3300000559	Soil	MSRPIQXRRRRLQALGLXVVAIVLVVVEPFPKGXXXXXXTPAHGIDLGDLPALGLLLVEACIAI*
JGI11643J12802_112977542	3300000890	Soil	YDLEVSRPTQRRRRLQALVLAAVAIGLVIVEPFPKGALLVSLTPTHGADVGDLPALALLLVAACLAI*
JGI10216J12902_1153336742	3300000956	Soil	VVPTTTDRAGIVGEMLGRIQTRRRRRVLALVLAAVAVGLVVVEPFPKGWVLLSLTRTHGVDAGDLPAVALLLVAVGVAI*
Ga0062593_1020829792	3300004114	Soil	LQTRRRRRLLALVLAAVAVGLVVLEPFPKGKVLLSLTSTHGVDAGDLPAVALLLVAVSLTV*
Ga0062590_1007912553	3300004157	Soil	SRLQTRRRRRLLALVLAAVAVGLVVLEPFPKGKVLLSLTSTHGVDAGDLPAVALLLVAVSLTV*
Ga0063356_1008353532	3300004463	Arabidopsis Thaliana Rhizosphere	VSVQTADTVDGMLLRSTRTRRKRRILALVLAVVAIGLVVVEPFPKGDVLLPLTHTHGIDTGDIPALAMLIVAAALAV*
Ga0063356_1009260462	3300004463	Arabidopsis Thaliana Rhizosphere	MSRPIQTRRRRLQALVLAAVAIGLAVIEPFPKGAVLLSLTATHGVDVGDLPALALLLVAACLAI*
Ga0062592_1004350372	3300004480	Soil	MSSRLQTRRRRRLLALVLAAVAVGLVVLEPFPKGKVLLSLTSTHGVDAGDLPAVALLLVAVSLTV*
Ga0075422_101228272	3300006196	Populus Rhizosphere	VRTAVTVDGMLSRSTRTRGRRRVLALVLAVVAVGLVVVEPFPKGAVLLSLTPTHGVDTGDIPALAMLLVAAALAV*
Ga0079217_108432742	3300006876	Agricultural Soil	MPPAVTIWEMSRPIQTRRRRFQALVLAAVAIGLVVIEPFPKGAVLLSLTATHGVDVGDLPALALLLVAACLAI
Ga0068865_1003760942	3300006881	Miscanthus Rhizosphere	MSRPTPTRHRRRLLALVLAAVAIGLVVVEPFPSGRVLLSLTDTHGIDAGDIPALAMLLVAACLAV*
Ga0079218_129684121	3300007004	Agricultural Soil	MLQRLQMGWSDARRYSREVSRPTTARRRRRLLALALAAVAIGLVVLEPFPKGEVLLSLTDTHGVDTGDIPALGMLLVAAYLVIRS*
Ga0111539_100642571	3300009094	Populus Rhizosphere	MLSRSTRTRGRRRVLALVLAVVAVGLVVVEPFPKGAVLLSLTPTHGVDTGDIPALAMLLVAAALAV*
Ga0111539_129815431	3300009094	Populus Rhizosphere	MSRPTPTRRRRRLLALVLAAVAIGLVVVEPFPSGRVLLSLTDTHGIDAGDIPALAMLLIAACLAV*
Ga0105245_107528881	3300009098	Miscanthus Rhizosphere	VSRPTAARRRRRLLALALAAVAIGLVVLEPFPKGEVLLSLTDNHGVDTGDIPALAMLLVAAYLAV*
Ga0105243_127808722	3300009148	Miscanthus Rhizosphere	VSRPTAARRRRTLLALALAAVAIGLVVLEPFPKGEVLLSLTDDHGVDTGDIPALAMLLVAAYLAV*
Ga0111538_101652125	3300009156	Populus Rhizosphere	MLSRSTRIRGRRRVLALVLAVVAVGLVVVEPFPKGAVLLSLTPTHGVDTGDIPALAMLLVAAALAV*
Ga0126307_101443512	3300009789	Serpentine Soil	MPPAVTIWEMSRPIQTRRRRLQALVLAAVAIGLVVIEPFPKGAVLLSLTATHGVDVGDLPALALLLVAACLAI*
Ga0126307_102420741	3300009789	Serpentine Soil	MQTRRRRRLLALVLAAVAVGLVIVEPFPKGNMLLSLTSTHGVDAGDLPAFALLLVAVGLAI*
Ga0126307_104422632	3300009789	Serpentine Soil	MLQMGWSDARRYSREVSRPTTTRRWRRLLAVALAAVAIGLVVLEPFPKGKVLLSLTDTHGIDTGDIPALAMLLVAAALAV*
Ga0126313_102076153	3300009840	Serpentine Soil	MARPTPSRRRRRLLAVALAVVALGLLVLEPFPKGDALLSLTPTHGLDTGDIPALAMLLVAAALVV*
Ga0126313_104263081	3300009840	Serpentine Soil	VTLEAPKIVDVHFTSATVGGMSRPTPTHRRRRTVELVLAAVAVRLMVVEPFPKGKVLLSLTSTHGVDAGDLPAT*
Ga0126305_101735192	3300010036	Serpentine Soil	METRRRRRFLVLMLAAAVVGLVVVEPFPKGKVLFSLTSTHGVDAGDLPAFALLLIAVGLAIKR*
Ga0126305_105210372	3300010036	Serpentine Soil	MQTRRWRRLLALVLAAVAVGLVIVEPFPKGNVLLLLTSTHGVDTGDLPAFALLLVAVGLAI*
Ga0126304_107043812	3300010037	Serpentine Soil	VDRRTSRYSREVPIPTAAARRRRRLLALALAVGAVGLVVVEEPFPKGKVLLSLTDTHGIDTGDIPALAMLLVAAALAV*
Ga0126315_100143151	3300010038	Serpentine Soil	METRRRRRVLVLMLAAAVVGLVVVEPFPKGKVLFSFTSTHGVDAGDLPAFALLLIAVGLAIKR*
Ga0126315_107105422	3300010038	Serpentine Soil	MLSTRTRRQRKLLALVLAALAIGLVVVEPFPKGEVLLSLTPKHGVDTGDIPALAILLVAAALAV*
Ga0126308_101766292	3300010040	Serpentine Soil	METRRRRRVLVLMLAAAVVGLVVVEPFPKGKVLFSLTSTHGVDAGDLPAFALLLIAVGLAIKR*
Ga0126312_100236613	3300010041	Serpentine Soil	MARPTPSRRRRRLLAVALAVVALGLLVLEPFPKGDVLLSLTPTHGLDTGDIPALAMLLVAAALVV*
Ga0126312_103296662	3300010041	Serpentine Soil	MLQMGWSDARRYSREVSRPTTTRRWRRLLAVALAAVAIGLVVLEPFPKGEVLLSLTDTHGIDTGDIPALAMLLVAAALAV*
Ga0126314_100626435	3300010042	Serpentine Soil	METRRRHRVLALMLAAVVVGLVVVEPFPKGKVLFSLTSTHGVDAGDLPAFALLVIAVGLAIKR*
Ga0126310_115840852	3300010044	Serpentine Soil	MLQMGWSDARRYSREVSRPTTARRWRRLLALALAAVAIGLVVLEPFPKGEVLLSLTDTHGIDTGDIPALAVLLVAAALAV*
Ga0126311_107722381	3300010045	Serpentine Soil	MLQRLQMGWSDARRYSREVSRPTTARRWRRLLALALAAVAIGLVVLEPFPKGEVLLSLTDTHGIDTGDIPALAMLLVAAALAV*
Ga0126306_104141872	3300010166	Serpentine Soil	MQTHRRRRLVALVLAAVAVGLVVVEPFPKGNVLLSLTSTHGVDGGDLPAFALLLVAVGLAI*
Ga0137364_105218522	3300012198	Vadose Zone Soil	MPTPSVLVTVEEMSRPMRTRRRRRLQALLLVAVAIAIVVVEPFGKGDVLVQLTATHGIDTTDLPAFALLLVAACLVI*
Ga0150985_1185554242	3300012212	Avena Fatua Rhizosphere	MQTRSRRRLLAVAAVAVGLVVVEPFPKGRVLLSLTSTHGVDSRDLPAFAVLLVAAGLVI*
Ga0150984_1004511491	3300012469	Avena Fatua Rhizosphere	RRRRRILALVLAVVAIGLVVVEPFPKGDVLLPLTHTHGVDTGDIPALAMLIVAAALAV*
Ga0150984_1198547072	3300012469	Avena Fatua Rhizosphere	MSRPTQNRRRLQALVIAAVAVGLVVVEPFPKGKVLFSLTRTHGVDVGDLPALALLLVAACLAI*
Ga0150984_1226202552	3300012469	Avena Fatua Rhizosphere	MQTRSRRRLLAVAAVAVGLVVVEPFPKGRVLLSLTSTHGVDARDLPAFAVLLVAAGLVI*
Ga0157303_101304281	3300012896	Soil	MPTPSVLVTVEEMSRPTRTRRRRRLQALLLVVVAIAIVVVEPFGKGDVLVQLTATHGIDTTDLPAFALLLVAACLVV*
Ga0157293_100914362	3300012898	Soil	MSSRLQTRRRRRLLALVLAAVAVGLVVLEPFPKGKVLLSLTSTHGVDAGDLPAVALLLVAVSL
Ga0157283_100886862	3300012907	Soil	MSSRLQTRRRRRLLALVLAAVAVGLVVLEPCPKGKVLLSLTSTHGVDAGDLPAVALLLVAVSLTV*
Ga0157286_100077142	3300012908	Soil	VQTADTVDGMLLRSTRTRRKRRILALVLAVVAIGLVVVEPFPKGDVLLPLTHTHGIDTGDIPALAMLIVAAALAV*
Ga0157286_100222122	3300012908	Soil	MSSRLQTRRRRRLLALVLAAVAVGLVVLEPFPKGKVLLSLTPTHGVDAGDLPAVALLLVAVSLTV*
Ga0157297_101595122	3300012914	Soil	VSRPIQRRRRLQALVLAAVAIGLVIVEPFPKGEVLVSLTPTHGVDVGDLPAVALLLVAAWLAI*
Ga0162650_1000097402	3300012939	Soil	RPTAARRRRRLLALALAAVAIVLMILEPLPKGDVLLSLTDTHGVDTGDIPAIAMLLVAAYLVIRS*
Ga0157372_115556401	3300013307	Corn Rhizosphere	VSRPTAARRRRRLLALALAAVAIGLVVLEPFPKGEVLLSLTDDHGVDTGDIPALAMLLVAAYLAV*
Ga0182008_109842311	3300014497	Rhizosphere	TVAEMSSRTPTRRRRRLLALVLAAVAVALVIVEPFPKGSVLFSLTPTHGVDAGDLPAVALLLIAVGLAV*
Ga0132258_102087493	3300015371	Arabidopsis Rhizosphere	MLSRPTRTRGRRRVLALVLAVVAIGLVVAEPFPKGAVLLSLTPTHGVDTGDIPALAMLLVAAALAV*
Ga0132258_102629192	3300015371	Arabidopsis Rhizosphere	MLLRSTRTRRGRRILALVLAVVAIGLVVVEPFPKGDVLLPLTHTHGVDTGDIPALAMLIVAAALAV*
Ga0132258_102871135	3300015371	Arabidopsis Rhizosphere	MQTRRRRRLQALVLAAVAVGLVVVEPFPKGKVLLSLTESHGVDVGDLPAVALLLVAACLAI*
Ga0132258_109378432	3300015371	Arabidopsis Rhizosphere	MSKPIRTRQRRLQALVFAAVAVGLVVVEPFPKGKVLLSLTESHGVDVGDLPAVALLLVAAYLVI*
Ga0132258_109599452	3300015371	Arabidopsis Rhizosphere	VSRPTQRRRRRFQALTLAAVAIGLVIVEPFPKGAVLVSLTPTHGVDVGDLPAVALLLVAACLAI*
Ga0132256_1005048592	3300015372	Arabidopsis Rhizosphere	VQTADTVDGMLLRSTRTRRGRRILALVLAVVAIGLVVVEPFPKGDVLLPLTHTHGVDTGDIPALAMLIVAAALAV*
Ga0132256_1007114832	3300015372	Arabidopsis Rhizosphere	MLSRSTRTRGRRRVLALVLAVVAIGLVVVEPFPKGAVLLSLTPTHGVDTGDIPALAMLLVAAALAV*
Ga0132256_1031493942	3300015372	Arabidopsis Rhizosphere	MQTRRRRRLQALVLAAVAVGLVVVEPFPKGKVLLSLTESHGVDVGDLPAVALLLVAA
Ga0132257_1009493402	3300015373	Arabidopsis Rhizosphere	MLSRSTRTRGRRRVLALVLAVVGIGLVVVEPFPKGAVLLSLTPTHGVDTGDIPALAMLLVAAALAV*
Ga0132255_1012955162	3300015374	Arabidopsis Rhizosphere	MQTRPRRRLQALVLAAVAVGLVVVEPFPKGKVLLSLTESHGVDVGDLPAVALLLVAACLAI*
Ga0190266_103506442	3300017965	Soil	VTVEEMSRPMRTRRRRRLQALLLAAVAIAIVVVAPFGKGDVLVQLTATHGIDTTDLPAFALLLVAACLVV
Ga0190266_108709852	3300017965	Soil	LALVLAAVAVGLVVVEPFPKGKVLLSLTSTHGVDTGDIPALAMLLVAACLAV
Ga0190266_110952971	3300017965	Soil	MQTRRRRRVLALVLAAVAVGLVVVEPFPKGKVLLSLTSTHGVDTGDIPALAMLL
Ga0184610_10957782	3300017997	Groundwater Sediment	MQTRSRRRLLALVLAAVAVGLVVVEPFPKGRVLLSLTSTHGVDAGDLPAPALLLVAAGLV
Ga0184608_100102983	3300018028	Groundwater Sediment	MQTRSRRRLLALVLAAVAVGLVVVEPFPKGRVLLSLTSTHGLDAGDLPAFALLLVAAGLV
Ga0184608_103670002	3300018028	Groundwater Sediment	MSSRMQTHRPRRVLAVVLAAVAVGLVVVEPFPKGKVLLSLTSTHGVDTGDIPALAMLLVAANLVIRS
Ga0184634_100542562	3300018031	Groundwater Sediment	MQTRSRRRLLALVLAAVAVGLVVVEPFPKGRVLLSLTSTHGVDAGDLPAFALLLVAAGLV
Ga0184619_100423032	3300018061	Groundwater Sediment	MQTRSRRRLLALVLAAVAVGLVVVEPFPKGRVLFSLTSTHGVDAGDLPAFALLLVAAGLV
Ga0184624_102020882	3300018073	Groundwater Sediment	MSRPTPTRRRRRLLALVLAAVAIGLVVVEPFPSGRVLLSLTDTHGIDAGDIPALAMLLVAACLAV
Ga0190270_112738781	3300018469	Soil	HMQTRRRRRVLALVLAAVAVGLVVVEPFPKGKVLLSLTSTHGVDTGDIPALAMLLVAANLVIRS
Ga0190270_121753412	3300018469	Soil	MQTSRRRRLLALVVAAVAVGLVVVEPFPKGTVLLSLTSTHGVDTGDIPALALLLVAVSLA
Ga0190274_117563692	3300018476	Soil	WPGARAATVDGMWSRMQTRGWRRILALVLAALAVGLVVVEPFPKGKVLLSLTSTHGVDTGDLPAFALLLLAVGLAI
Ga0190271_109339372	3300018481	Soil	MQTRRRRRVLALVLAAVAVGLVVVEPFPKGKVLLSLTSTHGVDTGDIPALAMLLVAANLVIRS
Ga0173481_105233741	3300019356	Soil	MSSRLQTRRRRRLLALVLAAVAVGLVVLEPFPKGKVLLSLTSTHGVDAGDLPAVALLLVAVSLTV
Ga0190267_103497772	3300019767	Soil	VSRPIQTRRRRLQALVLAVVAIVLVVVEPFPKGVVLVSLSDTHGIDLGDLPALALLLLAACLAI
Ga0222624_15099691	3300021951	Groundwater Sediment	MQTRSRRRLLALVLAAVAVGLVVVEPFPKGRVLLSLTSTHGVDAGDLPAFALLVVAAGLV
Ga0222625_15281711	3300022195	Groundwater Sediment	LLALVLAAVAVGLVVVEPFPKGRVLLSLTSTHGVDAGDLPAFALLLVAAGLII
Ga0224452_11261791	3300022534	Groundwater Sediment	GTVGEMPSRMQTRSRRRLLALVLAAVAVGLVVVEPFPKGRVLLSLTSTHGVDAGDLPAFALLLVAAGLVI
Ga0222623_101412492	3300022694	Groundwater Sediment	MQTHSRRRLLALVLAAVAVGLVVVEPFPKGRVLLSLTSTHGVDAGDLPAFALLLVAAGLV
Ga0222622_101854742	3300022756	Groundwater Sediment	MLLTPGRYPLEVSRPTQRRRRRLQALTLAAVAIGLVIVEPFPKGAVLVSLTPTHGVDVGDLPAVALLLVAACLAI
Ga0207688_101484351	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MSRPTPTRHRRRLLALVLAAVAIGLVVVEPFPSGRVLLSLTDTHGIDAGDIPALAMLLVAACLAV
Ga0207687_105116582	3300025927	Miscanthus Rhizosphere	VSRPTAARRRRRLLALALAAVAIGLVVLEPFPKGEVLLSLTDNHGVDTGDIPALAMLLVAAYLAV
Ga0207712_116157731	3300025961	Switchgrass Rhizosphere	MQTRRRRRLLAWVLAAVAIGLVVLGKMLLSLTSTHGVDAGDLPAVALLLVAACLAVRS
Ga0209795_101203362	3300027718	Agave	MPTPSVLVTVEEMSRPMRTRRRRRLQALLLVAVAIAIVVVEPFGKGDVLVQLTATHGIDTTDLPAFALLLVAACLVI
Ga0207428_100243452	3300027907	Populus Rhizosphere	VRTAVTVDGMLSRSTRTRGRRRVLALVLAVVAVGLVVVEPFPKGAVLLSLTPTHGVDTGDIPALAMLLVAAALAV
Ga0307321_10256232	3300028704	Soil	MSSRTRTRRRRLQALVLAAVAVGLVVVEPFPKGIVLLSLTHTHGVDVGDLPALALLLVAVGLAI
Ga0307321_10964592	3300028704	Soil	MQTHRPRRVLAVVLAAVAVGLVVVEPFPKGKVLLSLTSTHGVDTGDIPALAMLLVAAKSR
Ga0307291_10047174	3300028707	Soil	MQTRSRRRLLALVLAAVAVGLVVVEPFPKGRVLFSLTSTHGVDAGDLPAFALLLVAAGLI
Ga0307322_101013812	3300028710	Soil	RRRRVLALVLAAVAVGLVVVEPFPKGKVLLSLTSTHGVDTGDIPALAMLLVAANLVIRS
Ga0307285_101153232	3300028712	Soil	MQTGSRRRLLALVLAAVAVGLVVVEPFPKGRVLLSLTSTHGVDAGDLPAFA
Ga0307285_102014302	3300028712	Soil	SRMQTRSRRRRLALVLAAVAVGLVVVEPFPKGRVLLSLTSTHGVDAGDLPAFALLLVAAGLVI
Ga0307307_101759671	3300028718	Soil	VSRPTQRRRRRLLAFVLAVVAIGLVVVEPFPKGEVLVSFTPTHGVDVGDLPALALLLVAACLAI
Ga0307315_1000035711	3300028721	Soil	MQTHRPRRVLAVVLAAVAVGLVVVEPFPKGKVLLSLTSTHGVDTGDIPALAMLLVAANLVIRS
Ga0307315_100592513	3300028721	Soil	MQTRSRRRLLALVLAAVAVGLVVVEPFPKGRVLLSLTSTHGVDAGDLPAFALLVV
Ga0307315_101216341	3300028721	Soil	SRMQTHSRRRLLALVLAAVAVGLVVVEPFPKGRVLLSLTSTHGVDAGDLPAFALLLVAAGLVI
Ga0307319_100693741	3300028722	Soil	MQTHSRRRLLALVLAAVAVGLVVVEPFPKGRVLLSLTSTHGVDAGDLPAFALL
Ga0307319_101875672	3300028722	Soil	MSSRMETRRRRRVLALMLAAVVVGLVVVEPFPKGKVLFSLTSTHGVDAGDLPAFALLLIAVGLAIKR
Ga0307318_100354843	3300028744	Soil	METRRGRRVLALMLAAVVVGLVVVEPFPKGKVLFSLTSTHGVDAGDLPAFALLLIAVGLAIKR
Ga0307318_100531311	3300028744	Soil	VSVQTADTVDGMLLRSTRTRRKRRILALVLAVVAIGLVVVEPFPKGDVLLPLTHTHGVDTGDIPALAMLIVAAALAV
Ga0307318_102613961	3300028744	Soil	MSRPTPTRRRRRLLALVLAAVAIGLVVVEPFPNGQVLLSLTDTHGIDAGDIPALAMLLIAACLAV
Ga0307297_100347891	3300028754	Soil	MQSRRRRRVLALVLAAVAVGLVVVEPFPKGKVLLSLTSTHGVDTGDIPALAMLLVAANLVIRS
Ga0307316_103931972	3300028755	Soil	GRYHLEVSRPTQRRRRRLQAFVLAAVAVGLVVVEPFPKGEVLVSFTPTHGVDVGDLPALALLLVAACLAI
Ga0307288_102549202	3300028778	Soil	AGTVGEMSSRMQTRSRRRLLALVLAAVAVGLVVVEPFPKGRVLLSLTSTHGVDAGDLPAFALLLVAAGLVI
Ga0307323_102738972	3300028787	Soil	MQTRSRRRLLALVLAAVAVGLVVVEPFPKGRVLLSLTSTHGVDAGDLPAFALL
Ga0307287_101242531	3300028796	Soil	RLLALVLAAVAVGLVVVEPFPKGRVLLSLTSTHGVDAGDLPAFALLLVAAGLVI
Ga0307284_101325451	3300028799	Soil	MQTRSRRRRLALVLAAVAVGLVVVEPFPKGRVLLSLTSTHGVDAGDLPAFALLVVAAGLV
Ga0307294_101481001	3300028810	Soil	MQTRSRRRLLALVLAAVAVGLVVVEPFPKGRVLLSLTSTHGVDAGDLPAFALLLVAAGLI
Ga0307294_103509651	3300028810	Soil	VPLCASRMSRPITAGRRRRLLALMLAAVAIGLVVLEPLPKGRVLLSLTSSHGVDAGDLPALALLLVAISLVI
Ga0307302_100115481	3300028814	Soil	MQTHSRRRLLALVLAAVAVGLVVVEPFPKGRVLLSLTSTHGVDAGDLPAFALLLVAAGLI
Ga0307296_104832992	3300028819	Soil	MSRPTPTRRRRRLLALVLAAVAIGLVVVEPFPSGQVLLSLTDTHGIDAGDIPALAMLLVAACLAV
Ga0307286_100651691	3300028876	Soil	MLLTPGRYPLEVSRPTQRRRRRLQALTLAAVAIGLVIVEPFPKGAVLVSLTPTHGVDVGDLPAVALLLVAACLATS
Ga0307278_102223432	3300028878	Soil	VSRLTAARRRRRLLALALAAVAIVLVVLEPFPKGEVLLSLTDTHGVDIGDIPAIAMLLVAAYLVIRS
Ga0307300_100620532	3300028880	Soil	MSRPTPTRRRRRLLALVLAAVAIGLVVVEPFPNGQVLLSLTDTHGIDAGDIPALAMLLVAACLAV
Ga0307304_100451063	3300028885	Soil	MQTRSRRRRLALVLAAVAVGLVVVEPFPKGRVLLSLTSTHGVDAGDLPAFALLLVAAGLV
Ga0268240_101521862	3300030496	Soil	MSRPKRTRRWSKLLALVLAALAIGLLVVEPFPKGYVLLSLTPEHGVDSGDIP
Ga0308202_10147262	3300030902	Soil	MQTHSRRRLLALVLAAVAVGLVVVEPFPKGRVLLSLTSTHGVDAGDLPAFALLVVAAGLV
Ga0308190_10131812	3300030993	Soil	MQTGSRRRLLALVLAAVAVGLVVVEPFPKGRVLLSLTSTHGVDAGDLPAFALLVVAAGLV
Ga0308201_101973562	3300031091	Soil	MWPLLKGGYPLEVSRPTQRRRRLQALMLAAVAIGLVIVEPFPKGAVLVSLTPTHGVDVGDLPAVALLLVAACLAI
Ga0308201_103624461	3300031091	Soil	VSRPTAARGRRTLLALAFAAVAIGLLVLEPFPKGEVLLSLTDTHGVDTGDIPALAMLLVAAYLAIRS
Ga0308204_100278492	3300031092	Soil	MQTGSRRRLLALVLAAVAVGLVVVEPFPKGRVLFSLTSTHGVDAGDLPAFALLLVAAGLI
Ga0307408_1000059202	3300031548	Rhizosphere	MARPTPSRRRRRLLAVALAVVAVGLLVLEPFPKGDVLLSLTPTHGLDTGDIPALAMLLVAAALVV
Ga0307408_1000977472	3300031548	Rhizosphere	MLQMGWSDARRYSREVSRPTTTRRWRRLLAVALAAVAIGLVVLEPFPKGKVLLSLTDTHGIDTGDIPALAMLLVAAALAV
Ga0307408_1002922361	3300031548	Rhizosphere	RRRVLVLMLAAAVVGLVVVEPFPKGKVLFSLTSTHGVDAGDLPAFALLLIAVGLAIKR
Ga0307410_108601852	3300031852	Rhizosphere	MSSRMQTRRRRRLLALVLAAVAVGLVVVEPFPKGNVLLSLTSTHGVNAGDLPAFALLLAAVGLAI
Ga0307410_108989991	3300031852	Rhizosphere	MLQRLQMGWSDARRYSREVSRPTTARRWRRLLALALAAVAIGLVVLEPFPKGEVLLSLTDTHGIDTGDIPALAMLLVAAALAV
Ga0307406_100363112	3300031901	Rhizosphere	MSSRMETRRRRRVLVLMLAAAVVGLVVVEPFPKGKVLFSFTSTHGVDAGDLPAFALLLIAVGLAIKR
Ga0307406_113074741	3300031901	Rhizosphere	VSRPIQTRRRRLQALVLAVVAIVLVVVEPFPKGIVLVTLTPTHGIDLGDLPALALLLVAACLAI
Ga0307407_112228311	3300031903	Rhizosphere	MLQRLQMGWSDARRYSREVSRPTTARRWRRLLALALAAVAIGLVVLEPFPKGEVLLSLTDTHGIDTGDIPALAMLL
Ga0307409_1000020337	3300031995	Rhizosphere	MLQMGWSDARRYSREVSRPTTTRRWRRLLAVALAAVAIGLVVLEPFPKGEVLLSLTDTHGIDTGDIPALAVLLVAAALAV
Ga0307409_1014138151	3300031995	Rhizosphere	MSRPTRTSRQRKLLALVLAAVAIGLLVVEPFPKGEVLLSLTPTHGVDIGDIPALAMLLVAAALAV
Ga0307416_1003602291	3300032002	Rhizosphere	MLQMGWSDARRYSREVSRPTTTRRWRRLLAVALAAVAIGLVVLEPFPKGEVLLSLTDTHGIDTGDIPALAMLLVAAALAV
Ga0307416_1004311191	3300032002	Rhizosphere	MSSRMETRRRRRVLVLMLAAAVVGLVIVEPFPKGKVLFSFTSTHGVDAGDLPAFALLLIAVGLAIKR
Ga0307416_1028623821	3300032002	Rhizosphere	WRRLLAVALAAVAIGLVVLEPFPKGKVLLSLTDTHGIDTGDIPALAMLLVAAALAV
Ga0307414_122697591	3300032004	Rhizosphere	MTGQWSRYHLGVSRPIQTRRRRLQALVLALVAIVLVVVEPFPKGIVLVTLTPTHGIDLGDLPALALLLVAACLAI
Ga0307470_110287232	3300032174	Hardwood Forest Soil	MSRPTPIRRRRRLLALVLAAVAIGLVVVEPFPSGRVLLSLTDTHGIDAGDIPALAMLLVAACLAV
Ga0334913_006952_798_992	3300034172	Sub-Biocrust Soil	MRSSWSPWRRRAVALVLAAVAIGLVVAEPFPKGDTLLALTEHHGVDAGDLPAIALLLVAAWLAL
Ga0334932_024799_742_960	3300034174	Sub-Biocrust Soil	MVVTVEEMSRPMRTRLSRRLQALVLVAVAIVIVVVEPFGKGDVLLQLTPTHGVDSGDLPALALLLLAACLAI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F056725

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences