Metagenome / Metatranscriptome Family F056767

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F056767
Family Type	Metagenome / Metatranscriptome
Number of Sequences	137
Average Sequence Length	59 residues
Representative Sequence	LKDARIFEQVVISEGCIIEVRGYKEIPFSPDEVASVSVNHKRWNFRDQSDTRAKSRAATA
Number of Associated Samples	111
Number of Associated Scaffolds	137

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	3.68 %
% of genes near scaffold ends (potentially truncated)	92.70 %
% of genes from short scaffolds (< 2000 bps)	90.51 %
Associated GOLD sequencing projects	103
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.350 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (18.978 % of family members)
Environment Ontology (ENVO)	Unclassified (44.526 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (64.964 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 14.77% β-sheet: 12.50% Coil/Unstructured: 72.73%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 137 Family Scaffolds
PF04024	PspC	15.33
PF02780	Transketolase_C	5.11
PF04075	F420H2_quin_red	2.19
PF04966	OprB	2.19
PF02861	Clp_N	2.19
PF00578	AhpC-TSA	1.46
PF02223	Thymidylate_kin	1.46
PF02687	FtsX	1.46
PF12833	HTH_18	1.46
PF00072	Response_reg	0.73
PF13519	VWA_2	0.73
PF03551	PadR	0.73
PF13248	zf-ribbon_3	0.73
PF16326	ABC_tran_CTD	0.73
PF00903	Glyoxalase	0.73
PF04542	Sigma70_r2	0.73
PF16576	HlyD_D23	0.73
PF02348	CTP_transf_3	0.73
PF13360	PQQ_2	0.73
PF13464	DUF4115	0.73
PF01740	STAS	0.73
PF08327	AHSA1	0.73
PF01850	PIN	0.73
PF13413	HTH_25	0.73
PF00753	Lactamase_B	0.73
PF12704	MacB_PCD	0.73
PF13437	HlyD_3	0.73
PF10604	Polyketide_cyc2	0.73
PF09832	DUF2059	0.73

COG ID	Name	Functional Category	% Frequency in 137 Family Scaffolds
COG0542	ATP-dependent Clp protease, ATP-binding subunit ClpA	Posttranslational modification, protein turnover, chaperones [O]	2.19
COG3659	Carbohydrate-selective porin OprB	Cell wall/membrane/envelope biogenesis [M]	2.19
COG0125	Thymidylate kinase	Nucleotide transport and metabolism [F]	1.46
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.73
COG1083	CMP-N-acetylneuraminic acid synthetase, NeuA/PseF family	Cell wall/membrane/envelope biogenesis [M]	0.73
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.73
COG1212	CMP-2-keto-3-deoxyoctulosonic acid synthetase	Cell wall/membrane/envelope biogenesis [M]	0.73
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.73
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.73
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.73
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.73
COG1861	Spore coat polysaccharide biosynthesis protein SpsF, cytidylyltransferase family	Cell wall/membrane/envelope biogenesis [M]	0.73
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.73

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.35 %
Unclassified	root	N/A	3.65 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.35 %
Unclassified	root	N/A	3.65 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.35 %
Unclassified	root	N/A	3.65 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	70.80 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	5.11 %
Unclassified	root	N/A	3.65 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	18.98 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3.65 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	3.65 %
Unclassified	root	N/A	3.65 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.46 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.25 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	3.65 %
Unclassified	root	N/A	3.65 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	2.92 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.46 %
Acidobacteria bacterium AB60	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	0.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.25 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3.65 %
Unclassified	root	N/A	3.65 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.92 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.46 %
Acidobacteria bacterium AB60	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	0.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.25 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3.65 %
Unclassified	root	N/A	3.65 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.46 %
Acidicapsa	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa	0.73 %
Acidipila	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila	0.73 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.73 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.73 %
Acidobacteria bacterium AB60	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	0.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.25 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3.65 %
Unclassified	root	N/A	3.65 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.46 %
Acidicapsa dinghuensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa dinghuensis	0.73 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.73 %
unclassified Acidipila	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila	0.73 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.73 %
Acidobacteria bacterium AB60	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	0.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.25 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3.65 %
Unclassified	root	N/A	3.65 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.46 %
Acidipila sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila → Acidipila sp.	0.73 %
Acidicapsa dinghuensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa dinghuensis	0.73 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.73 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.73 %
Acidobacteria bacterium AB60	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	0.73 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002909\|JGI25388J43891_1000365	All Organisms → cellular organisms → Bacteria → Acidobacteria	8977	Open in IMG/M
3300004091\|Ga0062387_100168474	All Organisms → cellular organisms → Bacteria → Acidobacteria	1284	Open in IMG/M
3300004091\|Ga0062387_101002040	All Organisms → cellular organisms → Bacteria → Acidobacteria	640	Open in IMG/M
3300004092\|Ga0062389_102011530	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	754	Open in IMG/M
3300004631\|Ga0058899_12218493	All Organisms → cellular organisms → Bacteria → Acidobacteria	1375	Open in IMG/M
3300005332\|Ga0066388_101041151	All Organisms → cellular organisms → Bacteria → Acidobacteria	1377	Open in IMG/M
3300005471\|Ga0070698_100649257	All Organisms → cellular organisms → Bacteria → Acidobacteria	996	Open in IMG/M
3300005555\|Ga0066692_10115854	All Organisms → cellular organisms → Bacteria	1609	Open in IMG/M
3300005555\|Ga0066692_10754880	All Organisms → cellular organisms → Bacteria → Acidobacteria	600	Open in IMG/M
3300005557\|Ga0066704_10163550	All Organisms → cellular organisms → Bacteria → Acidobacteria	1496	Open in IMG/M
3300005586\|Ga0066691_10916238	All Organisms → cellular organisms → Bacteria → Acidobacteria	515	Open in IMG/M
3300005591\|Ga0070761_10229535	All Organisms → cellular organisms → Bacteria → Acidobacteria	1106	Open in IMG/M
3300005602\|Ga0070762_10787108	All Organisms → cellular organisms → Bacteria → Acidobacteria	643	Open in IMG/M
3300005764\|Ga0066903_100286666	All Organisms → cellular organisms → Bacteria → Acidobacteria	2588	Open in IMG/M
3300005764\|Ga0066903_102348142	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1031	Open in IMG/M
3300005921\|Ga0070766_10509669	All Organisms → cellular organisms → Bacteria → Acidobacteria	800	Open in IMG/M
3300006031\|Ga0066651_10699734	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	544	Open in IMG/M
3300006052\|Ga0075029_100802652	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	640	Open in IMG/M
3300006162\|Ga0075030_100638274	Not Available	844	Open in IMG/M
3300006176\|Ga0070765_100483981	All Organisms → cellular organisms → Bacteria → Acidobacteria	1162	Open in IMG/M
3300009012\|Ga0066710_103648124	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	580	Open in IMG/M
3300009038\|Ga0099829_11119701	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	652	Open in IMG/M
3300009089\|Ga0099828_10586543	All Organisms → cellular organisms → Bacteria → Acidobacteria	1004	Open in IMG/M
3300010043\|Ga0126380_10396396	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1023	Open in IMG/M
3300010048\|Ga0126373_10011185	All Organisms → cellular organisms → Bacteria → Acidobacteria	7273	Open in IMG/M
3300010048\|Ga0126373_10044220	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa dinghuensis	3931	Open in IMG/M
3300010048\|Ga0126373_12551704	All Organisms → cellular organisms → Bacteria → Acidobacteria	570	Open in IMG/M
3300010159\|Ga0099796_10341829	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300010303\|Ga0134082_10065918	All Organisms → cellular organisms → Bacteria	1404	Open in IMG/M
3300010322\|Ga0134084_10371532	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	550	Open in IMG/M
3300010326\|Ga0134065_10030341	All Organisms → cellular organisms → Bacteria	1582	Open in IMG/M
3300010343\|Ga0074044_10784260	All Organisms → cellular organisms → Bacteria → Acidobacteria	622	Open in IMG/M
3300010359\|Ga0126376_11874600	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300010359\|Ga0126376_11969719	All Organisms → cellular organisms → Bacteria → Acidobacteria	625	Open in IMG/M
3300010360\|Ga0126372_11074445	All Organisms → cellular organisms → Bacteria → Acidobacteria	821	Open in IMG/M
3300010361\|Ga0126378_10040928	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4246	Open in IMG/M
3300010361\|Ga0126378_10166066	All Organisms → cellular organisms → Bacteria → Acidobacteria	2262	Open in IMG/M
3300010361\|Ga0126378_11248056	All Organisms → cellular organisms → Bacteria → Acidobacteria	840	Open in IMG/M
3300010361\|Ga0126378_11930284	All Organisms → cellular organisms → Bacteria → Acidobacteria	672	Open in IMG/M
3300010361\|Ga0126378_13090409	All Organisms → cellular organisms → Bacteria → Acidobacteria	530	Open in IMG/M
3300010366\|Ga0126379_11767352	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	723	Open in IMG/M
3300010366\|Ga0126379_12761390	All Organisms → cellular organisms → Bacteria → Acidobacteria	587	Open in IMG/M
3300010366\|Ga0126379_13012960	All Organisms → cellular organisms → Bacteria → Acidobacteria	564	Open in IMG/M
3300010376\|Ga0126381_100876380	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1291	Open in IMG/M
3300010376\|Ga0126381_101202990	All Organisms → cellular organisms → Bacteria	1095	Open in IMG/M
3300010398\|Ga0126383_10526350	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1244	Open in IMG/M
3300010398\|Ga0126383_10684890	All Organisms → cellular organisms → Bacteria → Acidobacteria	1103	Open in IMG/M
3300010398\|Ga0126383_11265776	All Organisms → cellular organisms → Bacteria	828	Open in IMG/M
3300010398\|Ga0126383_13589148	All Organisms → cellular organisms → Bacteria → Acidobacteria	507	Open in IMG/M
3300010876\|Ga0126361_10400516	All Organisms → cellular organisms → Bacteria → Acidobacteria	1325	Open in IMG/M
3300011120\|Ga0150983_11734060	All Organisms → cellular organisms → Bacteria → Acidobacteria	659	Open in IMG/M
3300011120\|Ga0150983_12995268	All Organisms → cellular organisms → Bacteria → Acidobacteria	661	Open in IMG/M
3300011120\|Ga0150983_14837568	All Organisms → cellular organisms → Bacteria → Acidobacteria	606	Open in IMG/M
3300011120\|Ga0150983_16350456	All Organisms → cellular organisms → Bacteria → Acidobacteria	552	Open in IMG/M
3300011269\|Ga0137392_11495514	All Organisms → cellular organisms → Bacteria → Acidobacteria	534	Open in IMG/M
3300011271\|Ga0137393_10610516	All Organisms → cellular organisms → Bacteria → Acidobacteria	935	Open in IMG/M
3300012096\|Ga0137389_11308364	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	619	Open in IMG/M
3300012199\|Ga0137383_10512206	All Organisms → cellular organisms → Bacteria → Acidobacteria	879	Open in IMG/M
3300012203\|Ga0137399_10425583	All Organisms → cellular organisms → Bacteria	1109	Open in IMG/M
3300012203\|Ga0137399_10835086	All Organisms → cellular organisms → Bacteria	776	Open in IMG/M
3300012205\|Ga0137362_11129113	All Organisms → cellular organisms → Bacteria → Acidobacteria	666	Open in IMG/M
3300012349\|Ga0137387_10072716	All Organisms → cellular organisms → Bacteria	2346	Open in IMG/M
3300012351\|Ga0137386_10544783	All Organisms → cellular organisms → Bacteria → Acidobacteria	836	Open in IMG/M
3300012361\|Ga0137360_10799606	All Organisms → cellular organisms → Bacteria → Acidobacteria	812	Open in IMG/M
3300012361\|Ga0137360_11272127	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	636	Open in IMG/M
3300012397\|Ga0134056_1363732	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300012409\|Ga0134045_1438533	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	606	Open in IMG/M
3300012582\|Ga0137358_10535581	All Organisms → cellular organisms → Bacteria → Acidobacteria	788	Open in IMG/M
3300012683\|Ga0137398_10371203	All Organisms → cellular organisms → Bacteria	971	Open in IMG/M
3300012925\|Ga0137419_10842795	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	752	Open in IMG/M
3300012927\|Ga0137416_12006275	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	531	Open in IMG/M
3300012929\|Ga0137404_10891504	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300012971\|Ga0126369_10009320	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	7468	Open in IMG/M
3300012971\|Ga0126369_12271453	All Organisms → cellular organisms → Bacteria → Acidobacteria	629	Open in IMG/M
3300015054\|Ga0137420_1139407	All Organisms → cellular organisms → Bacteria	1172	Open in IMG/M
3300016319\|Ga0182033_12199314	All Organisms → cellular organisms → Bacteria → Acidobacteria	503	Open in IMG/M
3300016422\|Ga0182039_10586135	All Organisms → cellular organisms → Bacteria	973	Open in IMG/M
3300017936\|Ga0187821_10016144	All Organisms → cellular organisms → Bacteria	2584	Open in IMG/M
3300017936\|Ga0187821_10353930	All Organisms → cellular organisms → Bacteria → Acidobacteria	593	Open in IMG/M
3300020170\|Ga0179594_10346255	All Organisms → cellular organisms → Bacteria → Acidobacteria	564	Open in IMG/M
3300020579\|Ga0210407_10172076	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	1676	Open in IMG/M
3300020579\|Ga0210407_10721064	All Organisms → cellular organisms → Bacteria → Acidobacteria	772	Open in IMG/M
3300020583\|Ga0210401_11197956	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	618	Open in IMG/M
3300021088\|Ga0210404_10283516	All Organisms → cellular organisms → Bacteria	908	Open in IMG/M
3300021180\|Ga0210396_10901914	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	753	Open in IMG/M
3300021401\|Ga0210393_10951156	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	696	Open in IMG/M
3300021401\|Ga0210393_11253956	All Organisms → cellular organisms → Bacteria → Acidobacteria	595	Open in IMG/M
3300021405\|Ga0210387_10400239	All Organisms → cellular organisms → Bacteria	1216	Open in IMG/M
3300021420\|Ga0210394_11477322	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	575	Open in IMG/M
3300021432\|Ga0210384_10453315	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	1155	Open in IMG/M
3300021474\|Ga0210390_10011126	All Organisms → cellular organisms → Bacteria → Acidobacteria	7342	Open in IMG/M
3300021478\|Ga0210402_10763580	All Organisms → cellular organisms → Bacteria	891	Open in IMG/M
3300021479\|Ga0210410_10741896	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	865	Open in IMG/M
3300021559\|Ga0210409_11118175	All Organisms → cellular organisms → Bacteria → Acidobacteria	663	Open in IMG/M
3300022508\|Ga0222728_1064767	All Organisms → cellular organisms → Bacteria → Acidobacteria	639	Open in IMG/M
3300022722\|Ga0242657_1223732	All Organisms → cellular organisms → Bacteria → Acidobacteria	529	Open in IMG/M
3300024283\|Ga0247670_1042160	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	822	Open in IMG/M
3300026308\|Ga0209265_1103044	All Organisms → cellular organisms → Bacteria	739	Open in IMG/M
3300026317\|Ga0209154_1270383	All Organisms → cellular organisms → Bacteria → Acidobacteria	572	Open in IMG/M
3300026328\|Ga0209802_1097655	All Organisms → cellular organisms → Bacteria → Acidobacteria	1327	Open in IMG/M
3300026332\|Ga0209803_1058512	All Organisms → cellular organisms → Bacteria	1676	Open in IMG/M
3300026334\|Ga0209377_1136613	All Organisms → cellular organisms → Bacteria → Acidobacteria	955	Open in IMG/M
3300026356\|Ga0257150_1048016	Not Available	630	Open in IMG/M
3300026542\|Ga0209805_1439623	All Organisms → cellular organisms → Bacteria → Acidobacteria	507	Open in IMG/M
3300027537\|Ga0209419_1047010	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	836	Open in IMG/M
3300027548\|Ga0209523_1055265	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300027667\|Ga0209009_1014573	All Organisms → cellular organisms → Bacteria	1877	Open in IMG/M
3300027783\|Ga0209448_10060334	All Organisms → cellular organisms → Bacteria → Acidobacteria	1275	Open in IMG/M
3300027829\|Ga0209773_10239380	All Organisms → cellular organisms → Bacteria → Acidobacteria	758	Open in IMG/M
3300027846\|Ga0209180_10757579	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523	Open in IMG/M
3300027853\|Ga0209274_10228352	All Organisms → cellular organisms → Bacteria → Acidobacteria	950	Open in IMG/M
3300027862\|Ga0209701_10662571	All Organisms → cellular organisms → Bacteria → Acidobacteria	543	Open in IMG/M
3300027874\|Ga0209465_10615390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	537	Open in IMG/M
3300027879\|Ga0209169_10720647	Not Available	516	Open in IMG/M
3300027884\|Ga0209275_10322123	All Organisms → cellular organisms → Bacteria	861	Open in IMG/M
3300027889\|Ga0209380_10361772	All Organisms → cellular organisms → Bacteria → Acidobacteria	852	Open in IMG/M
3300027911\|Ga0209698_10602159	Not Available	844	Open in IMG/M
3300031122\|Ga0170822_12127962	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	678	Open in IMG/M
3300031573\|Ga0310915_10656007	All Organisms → cellular organisms → Bacteria	742	Open in IMG/M
3300031708\|Ga0310686_102381380	All Organisms → cellular organisms → Bacteria → Acidobacteria	1384	Open in IMG/M
3300031715\|Ga0307476_10489970	All Organisms → cellular organisms → Bacteria	910	Open in IMG/M
3300031720\|Ga0307469_11871278	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	581	Open in IMG/M
3300031753\|Ga0307477_10179493	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1475	Open in IMG/M
3300031754\|Ga0307475_11150456	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	606	Open in IMG/M
3300031764\|Ga0318535_10304760	All Organisms → cellular organisms → Bacteria → Acidobacteria	713	Open in IMG/M
3300031771\|Ga0318546_10906066	All Organisms → cellular organisms → Bacteria → Acidobacteria	621	Open in IMG/M
3300031777\|Ga0318543_10526596	All Organisms → cellular organisms → Bacteria → Acidobacteria	530	Open in IMG/M
3300031819\|Ga0318568_10487601	All Organisms → cellular organisms → Bacteria → Acidobacteria	769	Open in IMG/M
3300031820\|Ga0307473_10616895	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	751	Open in IMG/M
3300031942\|Ga0310916_10080704	All Organisms → cellular organisms → Bacteria	2570	Open in IMG/M
3300031945\|Ga0310913_10381033	All Organisms → cellular organisms → Bacteria → Acidobacteria	1000	Open in IMG/M
3300031962\|Ga0307479_10065701	All Organisms → cellular organisms → Bacteria	3499	Open in IMG/M
3300031962\|Ga0307479_10463980	All Organisms → cellular organisms → Bacteria	1250	Open in IMG/M
3300032068\|Ga0318553_10124992	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1324	Open in IMG/M
3300033405\|Ga0326727_10683232	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila → Acidipila sp.	826	Open in IMG/M
3300034163\|Ga0370515_0411029	All Organisms → cellular organisms → Bacteria → Acidobacteria	571	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.70%
Aquatic	Environmental → Aquatic	7.30%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	91.97%
Freshwater	Environmental → Aquatic → Freshwater	5.11%
Sediment	Environmental → Aquatic → Sediment	2.19%
Peat	Environmental → Terrestrial → Peat	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	75.18%
Loam	Environmental → Terrestrial → Soil → Loam	15.33%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.11%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.19%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.46%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	39.42%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	26.28%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	14.60%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.49%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.19%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.46%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.46%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.73%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.98%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	17.52%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	16.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.03%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.84%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	5.84%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.11%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.65%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.65%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.92%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.19%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.46%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.73%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.73%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.73%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.73%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.73%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.73%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.73%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002909	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012397	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012409	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022508	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-19-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024283	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK11	Environmental	Open in IMG/M
3300026308	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026356	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-A	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300027537	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027548	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027667	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25388J43891_10003651	3300002909	Grasslands Soil	ETGFGYHVVSVQLKDARIFEQVVISEGCIIEVRGYKEIPFSPQDVASVSVNHKRWNFRDQSDTRAKSRAATA*
Ga0062387_1001684742	3300004091	Bog Forest Soil	YDQVVTSEGCIIEVRGFKEIPFAPEEVASVNVNHKRWNFRGGSEVRPKVRAATA*
Ga0062387_1010020402	3300004091	Bog Forest Soil	GYQVVSVELRDGRSFDQVVTSEGCIIEVRGFKEIPFAPDEVASVNVNHKRWNFRGGSEIRAKVRAATA*
Ga0062389_1020115301	3300004092	Bog Forest Soil	TSEGCVIEVRGFKEIPFSPDEVASVDVNHKRWNFRGGSEIRLKARAATA*
Ga0058899_122184931	3300004631	Forest Soil	IGYHVVSVELNDGRFFEQVVVSEGFIIEVRGHREIPFAPNDVAAVSVNHKSWNFRDGSDARCKSRAASA*
Ga0066388_1010411511	3300005332	Tropical Forest Soil	SEGCIIEVRGYEEIPFAPEEVAFVIVNHKRWNFRDGSDIRIKCRAAIA*
Ga0070698_1006492571	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	RSFDQVVTSECCIIAVRGHKEIPFATDDVASVSVNHKRWNFREGSDARSKSGAATA*
Ga0066692_101158541	3300005555	Soil	GCIIEVRGYKEIPFSPDDVASVSVNHKLWNFRDQSDTRAKSRAATA*
Ga0066692_107548802	3300005555	Soil	GFGYQVVSVQLNDGRIFEQVVISEGCIIEVRGYKEIPFSADDVASVSVNHKRWNFRDQSDTRAKTRAATA*
Ga0066704_101635502	3300005557	Soil	VELKDGRSFDQVATSEGCVIEVRGYKEIPFAAEDIASVSVNHKRWNFRDGSDARSKCRAVTA*
Ga0066691_109162382	3300005586	Soil	IFEQVVISEGCIIEVRGYKEIPFSPDDVASVSVNHKRWNFRDQSDTRAKSRAATA*
Ga0070761_102295352	3300005591	Soil	EGCVIQVRGYKEIPFAPEDVASVNVNHKRWNFRGGSEIRPLSKAATA*
Ga0070762_107871081	3300005602	Soil	VRGYREIPFATNDVASVTVNHKRWNFRDGSDARNKSRAATA*
Ga0066903_1002866663	3300005764	Tropical Forest Soil	MGYQVILIELKDGTRFDQVVVSEGCIIEVRGYEEIPFAPEEVAFVIVNHKRWNFRDGSDIRIKCRAAIA*
Ga0066903_1023481421	3300005764	Tropical Forest Soil	ETGIGYQVISVELKDGRCFDQAVASEGCIIEVRGYEEIPFAPEEVASVIVNHKRWNFRDGSDSRRNARTACA*
Ga0070766_105096692	3300005921	Soil	QVSASEGCIIEVRGYMEIPFAGDDIASVRVNHKRWNFRDRSDARTKSRTTTG*
Ga0066651_106997342	3300006031	Soil	GFGYQVVSVQLKDARIFEQVLISEGCIIEVRGYKEIPFSPDAVASVSVNHKRWNFRDQSDTRAKTRAATA*
Ga0075029_1008026522	3300006052	Watersheds	VSVELKDKRVFEQVVISEGCVIEVRGYKEIPFAPDDVVSVNLNHKHWNFRAPSDVRVKSRAATA*
Ga0075030_1006382742	3300006162	Watersheds	SKETGIGYQVVSVELKDGRSFDQVATSEGCIIEVRGFKEIPFAPEDVASVTLNHKHWNFREVSDIRHKARAASA*
Ga0070765_1004839812	3300006176	Soil	EGCVIEVRGYKEIPFSPDEVASVNVNHRHWNFRSASGVRAKARAATA*
Ga0066710_1036481242	3300009012	Grasslands Soil	VISEGCIIEVRGYKEIPFSPDDVASVSVNHKRWNFRDQSDTRVKSRAATA
Ga0099829_111197012	3300009038	Vadose Zone Soil	KDKRVFEQVVISEGCIIEVRGYKEIPFTPDEVVSVNLTHKHWNFRDQSDTRAKSRAATA*
Ga0099828_105865432	3300009089	Vadose Zone Soil	ISVELKDGRAFDQVVASEGCIIEVRGYREIPFSPDDVVSVSINHKRWNFREGSDVRAKSRAATA*
Ga0126380_103963961	3300010043	Tropical Forest Soil	IIEVRGYEEIPFAPEEVASVIVNHKRWNFRDGSDSRRSARAACA*
Ga0126373_100111857	3300010048	Tropical Forest Soil	MGYQVIAVELKDGRCFDQVVASQGCIIEVRGYREIPFAPEEVESVIVNHNRWNFRGGSDIRIKCRAATA*
Ga0126373_100442202	3300010048	Tropical Forest Soil	VASEDCIIEVRGYGEIPFAPEEIESVIVNHKRWNFREVSDMRVKSRAASA*
Ga0126373_125517041	3300010048	Tropical Forest Soil	IEVRGYEEIPFAPEEVASVIVNHKRWNFRDSSDIRIKCRATSA*
Ga0099796_103418292	3300010159	Vadose Zone Soil	GYHVVSVELKDVKFKDQVVASEGCIIEVRGYREIPFTPDDVASVRVNHKHWNFRDGSDARAKSRAATA*
Ga0134082_100659181	3300010303	Grasslands Soil	ARIFEQVVISEGCIIEVRGYKEIPFSPDDVASVSVNHKRWNFRDQSDTRAKSRAATA*
Ga0134084_103715322	3300010322	Grasslands Soil	FGYQVVSVQLKDARIFEQVLISEGCIIEVRGYKEIPFSPDEVASVSVNHKRWNFRDQSDTRAKTRAATA*
Ga0134065_100303413	3300010326	Grasslands Soil	VSVQLKDARIFEQVLISEGCIIEVRGYKEIPFSPDEVASVSVNHKRWNFRDQSDTRAKTRAATA*
Ga0074044_107842601	3300010343	Bog Forest Soil	TGIGYQVIAVELKDGRRFEQVATSEGCIIEVRGFKEIPFSPEDVAAIKLNHKRWNFRDKSDVRIKVRAAAAGG*
Ga0126376_118746001	3300010359	Tropical Forest Soil	IISVELKDGRCFDQVVASEGCIIEVRGYEEIPFAPEEVASVSVNHKRWNFRDESDVRVKCRAATA*
Ga0126376_119697191	3300010359	Tropical Forest Soil	VVASEGCIIEVRGHEAIPFAPEEVESVVINHKRWNFRDASDARIICRAAAA*
Ga0126372_110744452	3300010360	Tropical Forest Soil	FDQVVASEGCIIEVRGYEQIPFAPEEVASVIVNHKRWNFRDGSDIRVKCRAASA*
Ga0126378_100409286	3300010361	Tropical Forest Soil	LVELGRTNFDQVVVSEAYIIEVRGYREVPFSVDEIESISVNHNRWNFRDGSDSRRKARAACA*
Ga0126378_101660661	3300010361	Tropical Forest Soil	VASEGCIIEVRGYEGIPFAPEEIASVIVNHKRWNFREASDIRVKCRAATA*
Ga0126378_112480563	3300010361	Tropical Forest Soil	GIGYQVISVELKDGRCFDQVVASEGCIIEVRGYEEIPFAPEEVASVIVNHRRWNFREGSDSRRKTRAACA*
Ga0126378_119302842	3300010361	Tropical Forest Soil	ASEGCIIEVRGYEEIPFAPEEVASVVVNHKRWNFRDGSDIRSKCRAATA*
Ga0126378_130904091	3300010361	Tropical Forest Soil	VELKDGRCFDQVVASQGCIIEVRGYREIPFAPEEVESVIVNHNRWNFRDGSDIRIKCRAATA*
Ga0126379_117673522	3300010366	Tropical Forest Soil	LKDGRCFDQVVASEGYIIEVRGYEEIPFAPEEVASVIVNHKRWNFRDGSDSRRSARAACA
Ga0126379_127613901	3300010366	Tropical Forest Soil	VVSEGCIIEVRGYNAIPFSPAEIATVSVNHKVWNFRDASDSRLKARAACG*
Ga0126379_130129601	3300010366	Tropical Forest Soil	VVVSEGCIIEVRGYEEIPFAPDEIASVIVNHKRWNFRDGSDIRIKCRAATA*
Ga0126381_1008763801	3300010376	Tropical Forest Soil	RCFDQVVASEGCIIEVRGYEEIPFAPEEVASVIVNHKRWNFRDGSDSRRSARAACA*
Ga0126381_1012029903	3300010376	Tropical Forest Soil	DGRCFDQVVASEGCIIEVRGYEEIPFAPEEIGSVIVNHKRWNFRDGSDIRIKCRAASA*
Ga0126383_105263502	3300010398	Tropical Forest Soil	MDCIIEVRGYEEIPFAPEEVAFVIVNHKRWNFRDGSDIRIKCRAAIA*
Ga0126383_106848902	3300010398	Tropical Forest Soil	EGCIIEVRGYGEIPFAPQEIESVIVNHKRWNFREASDIRIKCRAATA*
Ga0126383_112657762	3300010398	Tropical Forest Soil	CFDQVVASEGCIIEVRGYEEIPFAPEELASVIVNHKLWNFRDGSDSRRNARAACA*
Ga0126383_135891481	3300010398	Tropical Forest Soil	KDGRYFDQVVASEGCIIEVRGYGEIPFAPDEVASVIVNHKRWNFRDGSDMRAKCRAATA*
Ga0126361_104005161	3300010876	Boreal Forest Soil	VELKDGRFFDQVVESEGCVIEVRGYREIPFTPDDVASVRVNHKRWNFRDGSNARAKSKAAAA*
Ga0150983_117340601	3300011120	Forest Soil	LKNGRSFDQVLTSEGFIIEVRGCKEIPFAADDITSVRVNHKRWNFRDGSDARSKSRAASA
Ga0150983_129952681	3300011120	Forest Soil	VVSVELKDGRFFDQVVASEGCIIEVRGFKEIPFAPDDVALVKVNHKRWNFRAGSDARAKSRAATA*
Ga0150983_148375682	3300011120	Forest Soil	YQVVSVALKDGRCFDQVATSEGYIIEVRGYREIPFATNDVASVTVNHKRWNFRDGSDARNKSRAATA*
Ga0150983_163504562	3300011120	Forest Soil	VSVELRDGRSFDQVVTSEGCIIEVRGFKEIPFAPDEVASVNVNHKRWNFRSASGVRAKARAATA*
Ga0137392_114955141	3300011269	Vadose Zone Soil	SEGCIIEVRGYKEIPFASDDMASVSVNHKRWNFRDGSDARSKSRAATA*
Ga0137393_106105161	3300011271	Vadose Zone Soil	KETGIGYQVVSVELKDGRAFEQVVVSEGCIIEVRGYKEIPFMPDEVVSVNLTHKHWNFRDQSDTRAKSRAATA*
Ga0137389_113083641	3300012096	Vadose Zone Soil	EPGFGYQVVSVEQKVGRIFVRVVVSEECVIGIRGYKEIPFSADDVASVSVNHKRWNFRDQSDTRAKTRAASA*
Ga0137383_105122061	3300012199	Vadose Zone Soil	LFEQVVISEGCIIEVRGYNEIPFTPDEVVSVSRTHKNWNFRDQSDTRAKSKAATA*
Ga0137399_104255831	3300012203	Vadose Zone Soil	GRIFEQVAISEGCIIEVRGYMEIPFSPEDVASVSVNHKRWNFRDQSDTRAKTRAATA*
Ga0137399_108350862	3300012203	Vadose Zone Soil	ELKDGRFFDQVVASEGCIIEVRGYKEIPFAPEDVVLVKVNHKRWNFRDVSDARAKSRAATA*
Ga0137362_111291132	3300012205	Vadose Zone Soil	SVRLKDERIFEQVVISEGCIIEVRGYKEIPFTPDEVVSVNLTHKHWNFRDQSDTRAKSKAATA*
Ga0137387_100727161	3300012349	Vadose Zone Soil	LKDARIFEQVVISEGCIIEVRGYKEIPFSPDEVASVSVNHKRWNFRDQSDTRAKSRAATA
Ga0137386_105447831	3300012351	Vadose Zone Soil	TGFGYQVVSVQLKDARIFEQVVISEGCIIEVRRYKEIPFSPDEVASVSVNHKRWNFRDQSDTRAKSRAATA*
Ga0137360_107996062	3300012361	Vadose Zone Soil	VVISEGCIIEVRGYKEIPFLPDDVASVSVNHKRWNFRDQSDTRAKSRAATA*
Ga0137360_112721271	3300012361	Vadose Zone Soil	ETGIGYQVVSVQLKDERIFEQVVISEGCIIEVRGYKEIPFTPDEVVSVHLTHKHWNFRDQSDTRAKSRAATA*
Ga0134056_13637322	3300012397	Grasslands Soil	RIFEQVLISEGCIIEVRGYKEIPFSPDAVASVSVNHKRWNFRDQSDTRAKTRAATA*
Ga0134045_14385331	3300012409	Grasslands Soil	EETGFGYQVVSVQLKDARIFEQVLISEGCIIEVRGYKEIPFSPDEVASVSVNHKRWNFRDQSDTRAKTRAATA*
Ga0137358_105355812	3300012582	Vadose Zone Soil	YQVVSVELKDGRFFDQVVASEGCIIEVRGYKEIPFAPEDVVLVKVNHKRWNFRDVSDARAKSRAATA*
Ga0137398_103712032	3300012683	Vadose Zone Soil	SVELKDDRTFEQVVISEGCIIEVRGYREIPFSPDDVASVHVNHKRWNFRDQSDTRVKSKAASA*
Ga0137419_108427952	3300012925	Vadose Zone Soil	GRIFEQVAISEGCIIEVRGYMEIPFSPEDVASVSVNHKRWNFRDQSDTRAKSRAATA*
Ga0137416_120062752	3300012927	Vadose Zone Soil	RIFEQVVISEGCIIEVRGYKEIPFTPDEVVSVNLTHKLWNFRDQSDTRAKSRAATT*
Ga0137404_108915043	3300012929	Vadose Zone Soil	VVISEGCIIEVRGYKEIPFSPDDVASVSVNHKRWNFRDQSDTRAKSRAATA*
Ga0126369_100093207	3300012971	Tropical Forest Soil	VELKDGTRFDQVVVSEGCIIEVRGYEEIPFAPEEVAFVIVNHKRWNFRDGSDIRIKCRAAIA*
Ga0126369_122714531	3300012971	Tropical Forest Soil	CIIEVRGYEEIPFAPAEVASVIVNHKRWNFRDGSDIRTKCRAATA*
Ga0137420_11394073	3300015054	Vadose Zone Soil	QLKDGRIFEQVAISEGCIIEVRGYMEIPFSPEDVASVSVNHKRWNFRDQSDTRAKSRAATA*
Ga0182033_121993141	3300016319	Soil	KDGRCFDQVVASEGCIIEVRGYGEIPFAPQEIESVIVNHKRWNFREASDIRIKCRAATA
Ga0182039_105861351	3300016422	Soil	FDQVVVSEGCIIEVRGYNAIPFSPADIATVSVNHKVWNFRDASDSRLKARAACG
Ga0187821_100161442	3300017936	Freshwater Sediment	MGYQVVSVELRDGRSFGQVITSEGCIIEVRGHKGIPFSAEDVAAVSVNHRLWNFRDWSDPEIKAKAATA
Ga0187821_103539302	3300017936	Freshwater Sediment	QDGRKFDQVVTSEGHVIEVRGYKEIPFSPEEVASVSVNHKLWNFRSASGVRAKARAATA
Ga0179594_103462552	3300020170	Vadose Zone Soil	ETGIGYQVVSVELKDDRTFEQVVISEGCIIEVRGYREIPFSPDDVASVHVNHKRWNFRDQSDTRVKSKAASA
Ga0210407_101720761	3300020579	Soil	SVELKDGRRFDQAVVSEGCIIEVRGHDEICFSPAEIAWVSVNHNRWNFREGSDSRLRARAACA
Ga0210407_107210641	3300020579	Soil	YQVVSVELKDGRSFDQVSTSEGCIIEVRGYEEIPFAADDIASVRVNHKRWNFRDGSDARTKSRTATAPSSSPALPTARL
Ga0210401_111979561	3300020583	Soil	IEVRGYQEIPFAPEDVALVTVNHKRWNFRDGSDARAKSRAATA
Ga0210404_102835161	3300021088	Soil	GYQVVSVELKDQRVFDQVVISEGCVIEVRGYKEIPFSPDDVVSVNLNHKHWNFRAPSDVRVKSRAASA
Ga0210396_109019142	3300021180	Soil	DGRFVEQVVASEGCIIEVRGYNEIPFAPDDVASVKVNHKRWNFRAVSDARAKSRAATA
Ga0210393_109511562	3300021401	Soil	VELRDGRRFDQVVTSECCIIEVRGFKEIPFTPEEVAAVNVNHKRWNFRGGSEVRAKSHAATA
Ga0210393_112539561	3300021401	Soil	GELRDGRSFDQVVTSEGCVIEVRGFKEIPFSPDEVASVNVNHKRWNFRSASGVRAKARAATA
Ga0210387_104002391	3300021405	Soil	LLDGRSFDQVVTSEGCVIEVRGFKEIPFSAEEVASVNVNHKRWNFRGGSEVRAKARAATA
Ga0210394_114773222	3300021420	Soil	LKDGRFFDQVVASEGCIIEVRGHKEIPFAPDDVALVKVNHKRWNFRDGSDARAKSRAATA
Ga0210384_104533151	3300021432	Soil	LKDGRCYEQAVASEGCIIQVRGYETVPFAPNELESVRVNHKRWNFRDSSHARNKSRAASA
Ga0210390_100111261	3300021474	Soil	CIIEGRGFKEIPFAADEVASVNVNHKRWNFRGGSEVRPKTRAATA
Ga0210402_107635803	3300021478	Soil	VVISEGCVIEVRGYKEIPFSPDDVVAVNLNHKHWNFRAPSDARVKSRAASA
Ga0210410_107418962	3300021479	Soil	RDGRAFDQVVTSEGCIIEVRGFKDIPFAPEDVAAVNVNHKRWNFRGGSEVRPKARAATA
Ga0210409_111181751	3300021559	Soil	GYLVVSVELKDGRSFDQVATSEGCIIEVRGYKEIPFAPEDMIAVNVTHRGWNFRDVSDSRSKIKAAAT
Ga0222728_10647672	3300022508	Soil	GIGYQVVSVELRDGRSFDQVVTSEGCIIEVRGFKEIPFAPDEVASVNVNHKRWNFRSASGVRAKARAATA
Ga0242657_12237321	3300022722	Soil	KLRDGRSFDQVVTSEGCVIEVRGYEEIPFAPEDVASVMVNHKRWNFREGSDARAKSRAAT
Ga0247670_10421601	3300024283	Soil	TGMGYQIVAVKLKDGRCFDQVIASEGCLIQVRGYEVIPFGPEEVTSVSINHKRWNFRDVSHDRSKNLAASA
Ga0209265_11030443	3300026308	Soil	RGYKEIPFSPDEVASVSVNHKRWNFRDQSDTRAKTRAATA
Ga0209154_12703831	3300026317	Soil	TGFGYQVVSVQLKDARIFEQVVISEGCIIEVRGYKEIPFSPDDVASVSVNHKRWNFRDQSDTRAKSRAATA
Ga0209802_10976552	3300026328	Soil	KDARIFEQVVISEGCIIEVRGYKEIPFSPDDVASVSVNHKRWNFRDQSDTRAKSRAATA
Ga0209803_10585123	3300026332	Soil	ETGFGYQVVSVQLKDARIFEQVLISEGCIIEVRGYKEIPFSPDEVASVSVNHKRWNFRDQSDTRAKTRAATA
Ga0209377_11366131	3300026334	Soil	VQLKDARIFEQVVISEGCIIEVRGYKEIPFSPDDVASVSVNHKRWNFRDQSDTRAKSRAATA
Ga0257150_10480161	3300026356	Soil	EQVVVSEGCIIEVRGYTEIPFGSDDVASISVNHKRWNFRDGSDARGKSRAATA
Ga0209805_14396232	3300026542	Soil	RSFDQVATSEGCVIEVRGYKEIPFAAEDIASVSVNHKRWNFRDGSDARSKCRAVTA
Ga0209419_10470101	3300027537	Forest Soil	SEGFIIEVRGFKEIPFTTDDVASVSVNHKRWNFRDVSDAPRKSRAASA
Ga0209523_10552652	3300027548	Forest Soil	ASEGCIIEVRGYGEIPFAPQEIESVIVNHKRWNFREASDIRIKCRAATA
Ga0209076_10589821	3300027643	Vadose Zone Soil	SEGCIIEVRGYKEIPFMPDEVVSVNLTHKHWNFRDQSDTRAKSRAATA
Ga0209009_10145731	3300027667	Forest Soil	GAKETGIGYLVVSVELKDGRSFDQVLTSEGCIIEVRGYKEIPFMPQDMIAVKVTHRSWNFRDASDSRSKTRAAAT
Ga0209448_100603342	3300027783	Bog Forest Soil	RSYDQVVTSEGCIIEVRGFKEIPFAPEEVASVNVNHKRWNFRGGSEVRPKVRAATA
Ga0209773_102393801	3300027829	Bog Forest Soil	GYQVVSVELRDGRSFDQVVTSEGCIIEVRGFKEIPFAPDEVASVNVNHKRWNFRGGSEIRAKVRAATA
Ga0209180_107575792	3300027846	Vadose Zone Soil	QLKDERVFEQVVISEGCIIEVRGYKEIPFTPDEVVSVNLTHKHWNFRDQSDTRAKSRAAT
Ga0209274_102283522	3300027853	Soil	DQVVASEGCVIQVRGYKEIPFAPEDVASVNVNHKRWNFRGGSEIRPLSKAATA
Ga0209701_106625711	3300027862	Vadose Zone Soil	VISEGCIIEVRGYKEIPFMPDEVVSVHLTHKHWNFRDQSDTRAKSRAATA
Ga0209465_106153901	3300027874	Tropical Forest Soil	KDGRCFDQAVASEGCIIEVRGYEEIPFAPEEVASVIVNHKRWNFRDGSDSRRNARTACA
Ga0209169_107206471	3300027879	Soil	GETGIGYQVVSVELRDGRAFDQVVTSEGCIIEVRGFKEIPFAPEEVASVHVNHKRWNFRGGSEVRPKARAATA
Ga0209275_103221231	3300027884	Soil	LRDGRSFDQVVTSEGCVIEVRGFKEIPFSPEEVASVNVNHKRWNFRGGSEVRTKARAATA
Ga0209380_103617722	3300027889	Soil	VELLDGRSFDQVVTSEGCVIEVRGFKEIPFSAEEVASVNVNHKRWNFRGGSEVRAKARAATA
Ga0209698_106021591	3300027911	Watersheds	SKETGIGYQVVSVELKDGRSFDQVATSEGCIIEVRGFKEIPFAPEDVASVTLNHKHWNFREVSDIRHKARAASA
Ga0170822_121279622	3300031122	Forest Soil	ELKDERVFDQVVISEGCVIEVRGYKEIPFSPEDVVSVSLNHKHWNFRAPSDVRVKARAAN
Ga0310915_106560073	3300031573	Soil	GCIIEVRGYDEIPFAPAEVVSVSVNHKRWNFRDGSDARVKCRAANA
Ga0310686_1023813802	3300031708	Soil	VVTSEGCIIEVRGFKEIPFAADEVASVNVNHKRWNFRGGSEVRAKARAATA
Ga0307476_104899702	3300031715	Hardwood Forest Soil	VVSVELKDGRTFDQVVTSECCIIEVRGYKEIPFAAEDVALVSVNHKRWNFRDGSDARSKSRAATA
Ga0307469_118712782	3300031720	Hardwood Forest Soil	KDQRIFDQVVISEGCVIEVRGYKEIPFSPEDVVTVNLNHKHWNFRAPSDVRVKSRAASA
Ga0307477_101794933	3300031753	Hardwood Forest Soil	VLASEGCIIEVRGFEGIPFAPEEIASVMVNHKRWNFREGSDTRAKCRAATA
Ga0307475_111504562	3300031754	Hardwood Forest Soil	RIFEQVVISEGCVIEVRGYKEIPFAPEDVASVSVNHKHWNFRDQSDTRVKSRAASA
Ga0318535_103047601	3300031764	Soil	GCIIEVRGYDAIPFAPEEVASVIVNHKRWNFRDGSDIRVKCRAASA
Ga0318546_109060662	3300031771	Soil	FDQVVASEGCIIEVRGYGEIPFAPQEIESVIVNHKRWNFREASDIRIKCRAATA
Ga0318543_105265961	3300031777	Soil	GYQIISVELKDGRCFDQVVASEGCIIEVRGYGEIPFAPQEIESVIVNHKRWNFREASDIRIKCRAATA
Ga0318568_104876012	3300031819	Soil	CFDQVVASEGCIIEVRGYDAIPFAPEEVASVIVNHKRWNFREASDIRIKCRAATA
Ga0307473_106168951	3300031820	Hardwood Forest Soil	CVIEVRGYKEIPFAAEDIASVSVNHKRWNFRDGSDARSKCRAVTA
Ga0310916_100807044	3300031942	Soil	LKDGRCFDQVVASEGCIIEVRGYDAIPFAPEEVASVIVNHKRWNFRDGSDIRVKCRAASA
Ga0310913_103810331	3300031945	Soil	VISVDLLDGSHFDQVVVSEGCIIEVRGYDEIPFAPAEVVSVSVNHKRWNFRDGSDARVKCRAANA
Ga0307479_100657011	3300031962	Hardwood Forest Soil	GFGYQVVSVQLKDGRIFEQVVISEGCIIEVRGYKEIPFLPDDVASVSVNHKRWNFRDQSDTRAKSRAATA
Ga0307479_104639801	3300031962	Hardwood Forest Soil	FGYQVVSVQLKDGRIFEQVAISEGCIIEVRGYKEIPFSADDVASVSVNHKRWNFRDQSDTRVKTRAATA
Ga0318553_101249922	3300032068	Soil	SFDQVVASEGCIIEVRGYGEIPFAPQEIESVIVNHKRWNFRDGSDIRVKCRAASA
Ga0326727_106832322	3300033405	Peat Soil	QVVTSEGCIIEVHGYKEIPFAPDEVASITVNHRRWNFRDLSYARSKAKAAKA
Ga0370515_0411029_389_553	3300034163	Untreated Peat Soil	MFEQVAASEGCVIEVRGYEEIPFKGEEVESIRVNHKRWNFRDASPERKARSATA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F056767

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences