Metagenome / Metatranscriptome Family F056790

Basic Information
Family ID	F056790
Family Type	Metagenome / Metatranscriptome
Number of Sequences	137
Average Sequence Length	95 residues
Representative Sequence	MKHRHEDELARVLDVAPPQAYERGADGKRSWWRRALELFGTFRRKHGDGLTREDVAEYRKQKAREELPLTDPERHLGLRVSRLEDIAK
Number of Associated Samples	105
Number of Associated Scaffolds	137

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	89.78 %
% of genes near scaffold ends (potentially truncated)	97.81 %
% of genes from short scaffolds (< 2000 bps)	91.24 %
Associated GOLD sequencing projects	98
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Most Common Taxonomy
Group	Unclassified (67.153 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (24.088 % of family members)
Environment Ontology (ENVO)	Unclassified (22.628 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (51.825 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.52% β-sheet: 0.00% Coil/Unstructured: 59.48%
Feature Viewer

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Pfam ID	Name	% Frequency in 137 Family Scaffolds
PF04191	PEMT	4.38
PF03992	ABM	2.19
PF09265	Cytokin-bind	2.19
PF12599	DUF3768	2.19
PF13763	DUF4167	1.46
PF03401	TctC	0.73
PF00072	Response_reg	0.73
PF08401	ArdcN	0.73
PF00994	MoCF_biosynth	0.73
PF01329	Pterin_4a	0.73
PF01522	Polysacc_deac_1	0.73
PF07758	DUF1614	0.73
PF00528	BPD_transp_1	0.73
PF00144	Beta-lactamase	0.73
PF01183	Glyco_hydro_25	0.73
PF01638	HxlR	0.73
PF01970	TctA	0.73
PF00797	Acetyltransf_2	0.73
PF12681	Glyoxalase_2	0.73
PF13531	SBP_bac_11	0.73
PF07883	Cupin_2	0.73
PF01370	Epimerase	0.73

COG ID	Name	Functional Category	% Frequency in 137 Family Scaffolds
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	2.19
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	0.73
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.73
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.73
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.73
COG1784	TctA family transporter	General function prediction only [R]	0.73
COG2154	Pterin-4a-carbinolamine dehydratase	Coenzyme transport and metabolism [H]	0.73
COG2162	Arylamine N-acetyltransferase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.73
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.73
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.73
COG3333	TctA family transporter	General function prediction only [R]	0.73
COG3757	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	Cell wall/membrane/envelope biogenesis [M]	0.73
COG4089	Uncharacterized membrane protein	Function unknown [S]	0.73
COG4227	Antirestriction protein ArdC	Replication, recombination and repair [L]	0.73

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.15 %
All Organisms	root	All Organisms	32.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.15 %
cellular organisms	root	All Organisms → cellular organisms	32.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.15 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	32.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.15 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	18.98 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.73 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.15 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	16.79 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.73 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.73 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.15 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	10.95 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.46 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.73 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.73 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.15 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	4.38 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.19 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.46 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1.46 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.73 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.73 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.15 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	4.38 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.46 %
unclassified Hyphomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae	1.46 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.46 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	0.73 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.73 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.73 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.15 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	4.38 %
Bradyrhizobium australiense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium australiense	1.46 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1.46 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.46 %
Afipia felis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia felis	0.73 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	0.73 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.73 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.73 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000955\|JGI1027J12803_100342293	Not Available	1013	Open in IMG/M
3300004114\|Ga0062593_100645393	Not Available	1020	Open in IMG/M
3300004114\|Ga0062593_100667299	Not Available	1007	Open in IMG/M
3300004479\|Ga0062595_100807282	Not Available	774	Open in IMG/M
3300004480\|Ga0062592_100368107	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1126	Open in IMG/M
3300005093\|Ga0062594_100174892	All Organisms → cellular organisms → Bacteria	1452	Open in IMG/M
3300005341\|Ga0070691_10133097	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium australiense	1261	Open in IMG/M
3300005441\|Ga0070700_100944227	Not Available	705	Open in IMG/M
3300005459\|Ga0068867_102327821	Not Available	509	Open in IMG/M
3300005539\|Ga0068853_101596034	Not Available	632	Open in IMG/M
3300005544\|Ga0070686_100541332	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	909	Open in IMG/M
3300005546\|Ga0070696_101171178	Not Available	648	Open in IMG/M
3300005549\|Ga0070704_100865429	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium australiense	811	Open in IMG/M
3300005618\|Ga0068864_101076615	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300005713\|Ga0066905_100078647	All Organisms → cellular organisms → Bacteria → Proteobacteria	2157	Open in IMG/M
3300005718\|Ga0068866_10654938	Not Available	715	Open in IMG/M
3300005764\|Ga0066903_100984021	All Organisms → cellular organisms → Bacteria	1539	Open in IMG/M
3300005841\|Ga0068863_101706792	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300005842\|Ga0068858_100321575	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1479	Open in IMG/M
3300005843\|Ga0068860_102203008	Not Available	572	Open in IMG/M
3300006049\|Ga0075417_10397731	Not Available	681	Open in IMG/M
3300006049\|Ga0075417_10761014	Not Available	500	Open in IMG/M
3300006175\|Ga0070712_101474173	Not Available	594	Open in IMG/M
3300006573\|Ga0074055_10726835	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	501	Open in IMG/M
3300006844\|Ga0075428_100120675	Not Available	2854	Open in IMG/M
3300006844\|Ga0075428_100133963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2694	Open in IMG/M
3300006844\|Ga0075428_101387471	All Organisms → cellular organisms → Bacteria	738	Open in IMG/M
3300006844\|Ga0075428_101450734	Not Available	720	Open in IMG/M
3300006844\|Ga0075428_102131967	Not Available	579	Open in IMG/M
3300006845\|Ga0075421_100082561	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4053	Open in IMG/M
3300006847\|Ga0075431_100114333	All Organisms → cellular organisms → Bacteria	2786	Open in IMG/M
3300006871\|Ga0075434_101953640	Not Available	592	Open in IMG/M
3300006880\|Ga0075429_100193945	Not Available	1779	Open in IMG/M
3300006880\|Ga0075429_101355720	Not Available	620	Open in IMG/M
3300006880\|Ga0075429_101838251	Not Available	525	Open in IMG/M
3300006880\|Ga0075429_101974909	Not Available	505	Open in IMG/M
3300006903\|Ga0075426_11541619	Not Available	505	Open in IMG/M
3300006969\|Ga0075419_10643377	Not Available	748	Open in IMG/M
3300006969\|Ga0075419_10984379	Not Available	613	Open in IMG/M
3300007004\|Ga0079218_12633814	Not Available	598	Open in IMG/M
3300009081\|Ga0105098_10343262	Not Available	728	Open in IMG/M
3300009094\|Ga0111539_10947183	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1001	Open in IMG/M
3300009094\|Ga0111539_11326977	All Organisms → cellular organisms → Bacteria	835	Open in IMG/M
3300009094\|Ga0111539_11758544	All Organisms → cellular organisms → Bacteria	719	Open in IMG/M
3300009098\|Ga0105245_12675615	Not Available	552	Open in IMG/M
3300009100\|Ga0075418_10046763	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia felis	4652	Open in IMG/M
3300009100\|Ga0075418_12273343	Not Available	591	Open in IMG/M
3300009147\|Ga0114129_13254514	Not Available	527	Open in IMG/M
3300009147\|Ga0114129_13409177	Not Available	511	Open in IMG/M
3300009156\|Ga0111538_10551681	All Organisms → cellular organisms → Bacteria	1461	Open in IMG/M
3300009156\|Ga0111538_12021327	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	725	Open in IMG/M
3300009156\|Ga0111538_12315063	Not Available	675	Open in IMG/M
3300009156\|Ga0111538_12689639	Not Available	624	Open in IMG/M
3300009156\|Ga0111538_12989035	Not Available	591	Open in IMG/M
3300009553\|Ga0105249_13174029	Not Available	528	Open in IMG/M
3300009609\|Ga0105347_1403470	Not Available	588	Open in IMG/M
3300009792\|Ga0126374_10036815	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2358	Open in IMG/M
3300009792\|Ga0126374_10232885	Not Available	1190	Open in IMG/M
3300009806\|Ga0105081_1053802	Not Available	594	Open in IMG/M
3300009815\|Ga0105070_1111704	Not Available	545	Open in IMG/M
3300009837\|Ga0105058_1170740	Not Available	535	Open in IMG/M
3300010046\|Ga0126384_10799314	Not Available	844	Open in IMG/M
3300010046\|Ga0126384_10879227	Not Available	808	Open in IMG/M
3300010358\|Ga0126370_11135317	Not Available	722	Open in IMG/M
3300010358\|Ga0126370_11180250	Not Available	710	Open in IMG/M
3300010359\|Ga0126376_10445682	Not Available	1181	Open in IMG/M
3300010361\|Ga0126378_10576022	Not Available	1240	Open in IMG/M
3300010361\|Ga0126378_12507898	Not Available	589	Open in IMG/M
3300010362\|Ga0126377_13251876	Not Available	525	Open in IMG/M
3300010362\|Ga0126377_13484511	Not Available	509	Open in IMG/M
3300010366\|Ga0126379_10695951	All Organisms → cellular organisms → Bacteria	1110	Open in IMG/M
3300010373\|Ga0134128_12683838	Not Available	549	Open in IMG/M
3300010375\|Ga0105239_12122268	Not Available	653	Open in IMG/M
3300010401\|Ga0134121_10413080	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1223	Open in IMG/M
3300010401\|Ga0134121_12602810	Not Available	549	Open in IMG/M
3300010403\|Ga0134123_10512785	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1132	Open in IMG/M
3300012913\|Ga0157298_10249150	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300012948\|Ga0126375_10379937	Not Available	1013	Open in IMG/M
3300012984\|Ga0164309_10920045	Not Available	714	Open in IMG/M
3300012984\|Ga0164309_11814403	Not Available	523	Open in IMG/M
3300012987\|Ga0164307_11460446	Not Available	577	Open in IMG/M
3300012988\|Ga0164306_10671287	Not Available	820	Open in IMG/M
3300012989\|Ga0164305_11107337	Not Available	680	Open in IMG/M
3300013296\|Ga0157374_10853763	All Organisms → cellular organisms → Bacteria → Proteobacteria	927	Open in IMG/M
3300013296\|Ga0157374_11425318	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	716	Open in IMG/M
3300014326\|Ga0157380_10141832	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2065	Open in IMG/M
3300014326\|Ga0157380_12750683	Not Available	558	Open in IMG/M
3300014969\|Ga0157376_12257262	Not Available	583	Open in IMG/M
3300015371\|Ga0132258_10014733	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	16655	Open in IMG/M
3300015372\|Ga0132256_101162949	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	885	Open in IMG/M
3300016341\|Ga0182035_10732932	Not Available	863	Open in IMG/M
3300016371\|Ga0182034_10060904	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2543	Open in IMG/M
3300018060\|Ga0187765_10510633	Not Available	762	Open in IMG/M
3300018422\|Ga0190265_10412732	All Organisms → cellular organisms → Bacteria	1450	Open in IMG/M
3300018429\|Ga0190272_11190014	Not Available	748	Open in IMG/M
3300018469\|Ga0190270_10361151	Not Available	1325	Open in IMG/M
3300018469\|Ga0190270_12741878	Not Available	555	Open in IMG/M
3300021080\|Ga0210382_10459594	Not Available	564	Open in IMG/M
3300025910\|Ga0207684_10043198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3820	Open in IMG/M
3300025911\|Ga0207654_10852563	Not Available	659	Open in IMG/M
3300025920\|Ga0207649_11463591	Not Available	541	Open in IMG/M
3300025923\|Ga0207681_11479814	Not Available	569	Open in IMG/M
3300025941\|Ga0207711_11512717	Not Available	614	Open in IMG/M
3300025945\|Ga0207679_10695848	Not Available	922	Open in IMG/M
3300025986\|Ga0207658_11180196	Not Available	700	Open in IMG/M
3300026035\|Ga0207703_10721543	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	949	Open in IMG/M
3300026088\|Ga0207641_11047509	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300026118\|Ga0207675_101884547	Not Available	616	Open in IMG/M
3300027577\|Ga0209874_1136144	Not Available	562	Open in IMG/M
3300027880\|Ga0209481_10039936	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2150	Open in IMG/M
3300027880\|Ga0209481_10702000	Not Available	525	Open in IMG/M
3300027907\|Ga0207428_10533317	All Organisms → cellular organisms → Bacteria	850	Open in IMG/M
3300027909\|Ga0209382_10267581	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1936	Open in IMG/M
3300028381\|Ga0268264_12101044	Not Available	573	Open in IMG/M
3300028592\|Ga0247822_10485020	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	976	Open in IMG/M
3300028592\|Ga0247822_10900844	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	726	Open in IMG/M
3300028592\|Ga0247822_11216709	Not Available	629	Open in IMG/M
3300031564\|Ga0318573_10440529	Not Available	701	Open in IMG/M
3300031572\|Ga0318515_10579808	Not Available	597	Open in IMG/M
3300031682\|Ga0318560_10719049	Not Available	540	Open in IMG/M
3300031770\|Ga0318521_10678666	Not Available	625	Open in IMG/M
3300031771\|Ga0318546_10426548	Not Available	927	Open in IMG/M
3300031793\|Ga0318548_10556534	Not Available	559	Open in IMG/M
3300031794\|Ga0318503_10280014	Not Available	541	Open in IMG/M
3300031880\|Ga0318544_10351073	Not Available	573	Open in IMG/M
3300031890\|Ga0306925_10368002	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1543	Open in IMG/M
3300031910\|Ga0306923_12550249	Not Available	503	Open in IMG/M
3300031946\|Ga0310910_10717694	Not Available	790	Open in IMG/M
3300032013\|Ga0310906_11176939	Not Available	557	Open in IMG/M
3300032055\|Ga0318575_10517748	Not Available	606	Open in IMG/M
3300032063\|Ga0318504_10623949	Not Available	518	Open in IMG/M
3300032075\|Ga0310890_10697210	Not Available	795	Open in IMG/M
3300032174\|Ga0307470_10466572	All Organisms → cellular organisms → Bacteria	912	Open in IMG/M
3300032174\|Ga0307470_11721030	Not Available	528	Open in IMG/M
3300032180\|Ga0307471_100694589	All Organisms → cellular organisms → Bacteria	1182	Open in IMG/M
3300033290\|Ga0318519_10621610	Not Available	657	Open in IMG/M
3300034151\|Ga0364935_0125659	All Organisms → cellular organisms → Bacteria	801	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	56.20%
Host-Associated	Host-Associated	43.80%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	54.01%
Plants	Host-Associated → Plants	43.80%
Aquatic	Environmental → Aquatic	2.19%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	53.28%
Rhizosphere	Host-Associated → Plants → Rhizosphere	35.04%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.76%
Freshwater	Environmental → Aquatic → Freshwater	1.46%
Sediment	Environmental → Aquatic → Sediment	0.73%
Floodplain	Environmental → Terrestrial → Floodplain	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	43.07%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	31.39%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.03%
Loam	Environmental → Terrestrial → Soil → Loam	6.57%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.65%
Sand	Environmental → Terrestrial → Soil → Sand	2.92%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.46%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.73%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.73%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	31.39%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.44%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	13.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.03%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.11%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.38%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.65%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	2.92%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.46%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.46%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.73%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.73%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.73%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	24.09%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.49%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.30%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	5.84%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.65%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.92%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	2.92%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.19%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.19%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.46%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.46%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.46%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.46%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.46%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.46%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.46%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.73%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.73%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.73%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.73%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.73%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.73%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.73%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.73%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.73%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.73%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.73%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006573	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009806	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_50_60	Environmental	Open in IMG/M
3300009815	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10	Environmental	Open in IMG/M
3300009837	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027577	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M
3300034151	Sediment microbial communities from East River floodplain, Colorado, United States - 2_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1003422931	3300000955	Soil	VKHERELARVLDVTPPEAYERSAEGKRA*WRRALDLFATFRRKHGDTLTREDIAEYRRQKEREELPVTDPERHLGLRVSRLEDMAKGLVVDGDSELNDLGDNAEVREQEEGGSPNSGYSI
Ga0062593_1006453931	3300004114	Soil	VQHEDEDELARALEMVPPQAYERGADGKRAWWRRALDLFGTFRRKQGDALSREDVAEYRKQKAREELQVTDPERHLGLRVSRLEDMAKGLVVDGDVEFN
Ga0062593_1006672991	3300004114	Soil	VVVRAPLVGPLQMKHEHENKLARVLNVAPPQAYERGADGKRSWWRRALELFGTFNRKHGDLLTREDVAEYRAQKAREELPVTDPERHLGLRVSRLDDL
Ga0062595_1008072821	3300004479	Soil	LCPRCACVAIRIHRLKHEHETKLAPVLGVAPPQAYERGADGKRSWWRRALELFGTFQRKHGDVLTREDVAEHREQKAREELPVTDPERHLGLRV
Ga0062592_1003681072	3300004480	Soil	MQVKKHEHEGKLARLLGVAPPQAYERGADGKRVWWRRALELFGTFKRKHGDLLTREDVAEYRKQKAREELPVTDPERHLGLRVSRVEDLAKGLVVDGDADLNDLGDNSQIKDDDSGSQPNTG
Ga0062594_1001748921	3300005093	Soil	VKEKHEGELARVLNVAPPQAYDRGAEGKRSWWRRAITLFGTFKGKHGDALTREDVAEYKKQKAREALPVTDPERHLGLRVSRLEDFAKGLVVDGDVEFNDLGDNFES
Ga0070691_101330971	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	VKEKHEGELARVLNVAPPQAYDRGAEGKRSWWRRAITLFGTFKGKHGDALTREDVAEYKKQKAREALPVTDPERHLGLRVSRLEDFAKGLVVDGDVEFND
Ga0070700_1009442271	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	VKHESELARILDVAPPEAYERGADGRRAWWRRALELFGTFRRNHGDALTREDVAEFRKHKAREELPVTDPERHLGLRVSRLEDAAKGLVVDGDVELNDLGDNGEAKD
Ga0068867_1023278211	3300005459	Miscanthus Rhizosphere	MQVKKHEHEGKLARLLGVAPPQAYERGADGKRVWWRRALELFGTFKRKHGDLLTREDVAEYRKQKAREELPVTDPERHLGLRDSRVEDLAKGLVVDGDADLNDLGDNSQ
Ga0068853_1015960342	3300005539	Corn Rhizosphere	MKHEHENKLARVLNVAPPQAYERGADGKRSWWRRALELFGTFNRKHGDLLTREDVAEYRAQKAREELPVTDPERHLGLRVSRLDDLAKGLIVDGDVDLNDLGDNSEIKDEEFGSQPNTGY
Ga0070686_1005413322	3300005544	Switchgrass Rhizosphere	MQVKKHEHEGKLARLLGVAPPQAYERGADGKRVWWRRALELFGTFKRKHGDLLTREDVAEYRKQKAREELPVTD
Ga0070696_1011711782	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	VKHEDEDELARVLDMAAPQAYTRDADGKRPWWRRALELFGTFSRKHGDTLTREDVAEYRKQKAREELPVTDPERHLGLRVSRLEDL
Ga0070704_1008654292	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	VKEKHEGELARVLNVAPPQAYDRGAEGKRSWWRRAITLFGTFKGKHGDALTREDVAEYKKQKAREALPVTDPERHL
Ga0068864_1010766152	3300005618	Switchgrass Rhizosphere	MQVKKHEHEGKLARLLGVAPPQAYERGADGKRVWWRRALELFGTFKRKHGDLLTREDVAEYRKQKAREELPVTDPERHLGLRVSRVEDLAKGLVVDGDADLNDLGDNSQIKDD
Ga0066905_1000786471	3300005713	Tropical Forest Soil	VKQKHEGDLARILNVAPPQAYDRGADGKRSWWRRAITLFGTFKGKHGAALTREDVAEYRKQKAREELPVTDPERHLGLRVSRLDDFAKGLVVDGDVEVNDLGDNFEIKEED
Ga0068866_106549382	3300005718	Miscanthus Rhizosphere	VKEKHEGELARVLNVAPPQAYDRGAEGKRSWWRRAITLFGTFKGKHGDALTREDVAEYKKQKAREALPVTDPERHLGLRVSRLEDFAKGLVVDGDVEFNDLGDNFESKEEDDGKEPNTG
Ga0066903_1009840211	3300005764	Tropical Forest Soil	VKPKHESDLARVLNVAPPQAYDRGASGKRSWWRRAIDLFGTFRRKHGDALTREDVAEYRRQRARAELPITDPERHLGLRVSRLDDFAKGLVVDGDVEVNDLG
Ga0068863_1017067921	3300005841	Switchgrass Rhizosphere	MQVKKHEHEGKLARLLGVAPPQAYERGADGKRVWWRRALELFGTFKRKHGDLLTREDVAEYRKQKA
Ga0068858_1003215751	3300005842	Switchgrass Rhizosphere	MQVKKHEHEGKLARLLGVAPPQAYERGADGKRVWWRRALELFGTFKRKHGDLLTREDVAEYRKQKAREELPV
Ga0068860_1022030081	3300005843	Switchgrass Rhizosphere	VKHEDEDELARALEMVPPQAYERGADGKRAWWRRALDLFGTFRRKQGDALSREDVAEYRKQKAREELPVTDPERHLGLRVSRLEDMPRGLVVDGNVEFNDLGDNFDLSLPESAARTRWLRQANVLAT
Ga0075417_103977311	3300006049	Populus Rhizosphere	VKHESELARILDVAPPEAYERGADGRRAWWRRALELFGTFRRSHGDALTREDVAEFRKHKAREELPVTDPERHLGLRVSRL
Ga0075417_107610141	3300006049	Populus Rhizosphere	MQMKHEHESKLARVLNVTPPQAYERGADGKRSWWRRALELFGTFKRKHGDLLTREDVAEYRTQQAREELPVTDPERDLGLRVSRLDDLAKGLIVDGDVD
Ga0070712_1014741731	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VKHEPEVELARVLDVAPPQAYERGTAGKRAWWRRALELFGTFRRKHGTSLTREDVAEYSKQKAREELPVTDPERHLMLRVSRLEDLAKGLVVDGDVDV
Ga0074055_107268352	3300006573	Soil	MAPPQAYERGADGKRAWWRRALDLFGTFRRKQGDALSREDVAEYRKQKAREELPVTDPERHLGLRVSRPEDMAKGLVVDGDVEF
Ga0075428_1001206751	3300006844	Populus Rhizosphere	MKHEHENKLARVLNVAPPHAYERGADGKRSWWRRALELFGTFKRKHGDVLTREDVAEYRKQKAREELPVTDPERHLGLRVSRLDDLAKGLIVDGDVDLNDLGDNSEIKDEEFGS
Ga0075428_1001339636	3300006844	Populus Rhizosphere	VKQEHERELARVLDVAPPQAYERAADGKRAWWRRALELFGTFRRKRGTVLTREDVAEYRKQKAREELPVTDPER
Ga0075428_1013874711	3300006844	Populus Rhizosphere	VKHKHESELARVLDVAPPQAYERGTDGKRSWWRRALDLFGTYRRKHGGALTREDVAEYCKQKARVELPVTDPERHLG
Ga0075428_1014507342	3300006844	Populus Rhizosphere	MKHRHEDELARVLDVAPPQAYERGADGKRSWWRRALELFGTFRRKHGGALTREDVAEYRKQKEREELPVTDPERHL
Ga0075428_1021319671	3300006844	Populus Rhizosphere	VKHKHESELSRVLDIAPPQAYERGADGKRTWWRRALELFGTFRGKHGDGLTREDLAEYRKQKAREELPVTDPERHLGLRVSRLDDIAKGLVVDGDVDLNDLGESSEPADE
Ga0075421_1000825618	3300006845	Populus Rhizosphere	VKHKHEGELARVLDVAPPQAYERGADAKRPWWRRALELFSTFKGKHGDALTREDVAEYRKQKAREELPVTDPERHLGLRVSRGGYRQRLGGRR*
Ga0075431_1001143334	3300006847	Populus Rhizosphere	VKHESELARILDVAPPEAYERGADGRRAWWRRALELFGTFRRNHGDALTREDVAEFRKHKAREELPVTDPERHL
Ga0075434_1019536402	3300006871	Populus Rhizosphere	VKHKHEGELARVLDVAPPQAYERGADGKRSWWRRALELFGTFRHKHAHALTREDVAEYRKQKAREELPVTDPERHLGLRVSRLEDLAKGLVVDGDVEVNDLGEN
Ga0075429_1001939451	3300006880	Populus Rhizosphere	VKHDHESELGRILDVAPPPAYERGADGKRAWWRRALELFGTFSRKQGDVLTREDVAEYRKQKAREELPVTDPERHLGLRVSRLEDMAKGLVVDGDVEVSDLGDNFETKEDEYRAEPNTGY
Ga0075429_1013557201	3300006880	Populus Rhizosphere	MKHEHENKLARVLNVAPPHAYERGADGKRSWWRRALELFGTFKRKHGDVLTREDVAEYRKQKAREELPVTDPERHLGLRVSRLDDLAKGLIVDGDVDLNDLGDNSEIKDEE
Ga0075429_1018382512	3300006880	Populus Rhizosphere	VKHNHESELARVLDVAPPQAYDRGADGRRPWWRRALELFGTFRSKHGDALTREDVAEYRKQKAREELPVPDPERHLGLR
Ga0075429_1019749091	3300006880	Populus Rhizosphere	LRRVASVVHASVSGSCTVKHEHESELARVLEVAPPPAYERGAEGKRAWWRSALELFGTFRRKQGDALTREDVAEYRKQKAREE
Ga0075426_115416192	3300006903	Populus Rhizosphere	LKHEHEAKLAPVLGVAPPQAYERGADGKRSWWRRALELFGTFQRKHGDVLTREDVAEHRKQKAREELPVTDPERHLGLRVSRLEDFAKGLVVDGDVEFNDLG
Ga0075419_106433771	3300006969	Populus Rhizosphere	VKHDHESELGRILDVAPPPAYERGADGKRAWWRRALELFGTFSRKQGDVLTREDVAEYRKQKAREELPVTDPERHLGLRVSRLEDMAKGLVVDGDVEVSDLGDNFETKEDEYR
Ga0075419_109843793	3300006969	Populus Rhizosphere	MQMKHEHESKLARVLNVTPPQAYERGADGKRSWWRRALELFGTFKRKHGDVLTREDVAEYRKQKAREELPVTDPERHLGLRVS
Ga0079218_126338141	3300007004	Agricultural Soil	VKQKHESELARVLDVAPPQAYERGADGKRAWWRRAVELFGTFRRKRGAVLTREDVAEYRKRKAREELP
Ga0105098_103432622	3300009081	Freshwater Sediment	VKHEHNGELARVLDVAPPQTYERGADGKRPWWRRALELFGTFKGKHGDALTREDVAEYRKQKAREELPITDPERHLGLRVSRLEDVAKG
Ga0111539_109471831	3300009094	Populus Rhizosphere	LDVAPPQAYDRGADGKRPWWRRALELFSTFKGKHGDALTREDVAEYRKQKAREELPVTDPERHLGLRVS
Ga0111539_113269771	3300009094	Populus Rhizosphere	VKQKHESELARVLNVAPPQAYERAADGKRSWWRRALELFGTFNRKHGDVLTREDVAEYRKQKAREELPVTDPERHLGLRVSRVEDLAKGLVVDGD
Ga0111539_117585442	3300009094	Populus Rhizosphere	LVVHASVAGSITVKHKHEGELASVLDVAPAQAYERGADGRRPWWRRALELFSTFKGKHGDALTREDVAEYRKQKAREELPVTDP
Ga0105245_126756151	3300009098	Miscanthus Rhizosphere	MQVKKHEHEGKLARLLGVAPPQAYERGADGKRVWWRRALELFGTFKRKHGDLLTREDVAEYRKQKAREELPVTDPERHLGLRVSRVEDLAKGLVVDGDADLNDLGDNSQIKDDDSGSQP
Ga0075418_100467631	3300009100	Populus Rhizosphere	MQMKHEHENKLARVLNVAPPHAYERGADGKRSWWRRALELFGTFKRKHGDVLTREDVAEYRKQKAREELPVTDPERHLGLRVSRLDDLAKGLIVDGDVDLNDLGDNSEIKDE
Ga0075418_122733432	3300009100	Populus Rhizosphere	VKHESELARILDVAPPEAYERGADGRRAWWRRALELFGTFRRNHGDALTREDVAEFRKHKAREELPVTDPERHLGLRVSRLEDAAKG
Ga0114129_132545141	3300009147	Populus Rhizosphere	VHASVAGSITVKHKHEGELARVLDVAPPQAYERGADAKRPWWRRALELFSTFKGKHGDALTREDVAEYRKQKAREELPVTDPERHLGLRVSRLEDLAKGLVVDGDVDLNDLGDNFEIKDG
Ga0114129_134091771	3300009147	Populus Rhizosphere	VKQKHESELARVLDVATPQAYERGAGGKRAWWRRAVELFGTFRRKRGAVLTREDVAEYRKQKAREELPVTDPERHLGLRVSRVEDLAKGLVVDGDVDLND
Ga0111538_105516812	3300009156	Populus Rhizosphere	MQVKHEHESKLARVLDVAPPRAYERGADGKRSWWRRALELFGTFRRKHGDVLTREDVAEYRKQKAREGLPVTDPERHLGLRVSRLDDLAKGLVVDGDIDLNDLGDNG
Ga0111538_120213272	3300009156	Populus Rhizosphere	LVVHASVAGSITVKHKHEGELASVLDVAPAQAYERGADGKRPWWRRALELFSTFKGKHGDALTREDVAEYRKQKAREELPVTDP
Ga0111538_123150631	3300009156	Populus Rhizosphere	VKHEHEGELARVFGVAPPQTYERGAEGKRPWWRRALELFGTFKGKHGDALTREDVVEYRKQKAREELPVTDPERHLGLRVSRLEDIAKGLVVDG
Ga0111538_126896391	3300009156	Populus Rhizosphere	VKHEYESGLARVLDVAPPQAYERGADGKRAWWRRALDLFGTFRRRHGAALTREDVAEYRASKAREELAATDPERHLGLRVSRLEDIAKGLVVDGDIELSDLGEGLGGGRGRAGRRAQHRLLDP
Ga0111538_129890351	3300009156	Populus Rhizosphere	LDVAPPQAYDRGADGKRPWWRRALELFSTFKGKHGDALTREDVAEYRKQKAREELTVTDPERHLGLR
Ga0105249_131740291	3300009553	Switchgrass Rhizosphere	VKHKHERELARVLDVAPPQAYKRDADGKRPWWRRALELFNTFGRKHGDALTREDVAEYRKQKAREELPVTDPERHLGLRVSRLEDLAKGLVVDGDVDVNDLGDNFDVK
Ga0105347_14034701	3300009609	Soil	VKHKHERELSRVLDVAPPQAYERGADGKRSWWRRALELFGTFRGRHGDALTREDVAEYRKQKAREELPVTDPERHLGLRVSRLEDIAKGLVVDGDVDVNDLGENS
Ga0126374_100368153	3300009792	Tropical Forest Soil	VKQTHEGQLARVLNVAPPQAYERGADRKRSWWRRAVELFGTFRRKHGDVLTREDVAEYRKQKAREQLPVTDPERHLGLRVSRLDDF
Ga0126374_102328851	3300009792	Tropical Forest Soil	VKHEPEAQLARVLDVAPPQAYERGSSGKRAWWRRALELFGTFRRKHGTSLTREDVAEYSKHKAREELPVTDP
Ga0105081_10538021	3300009806	Groundwater Sand	VKQKHESELARVLDVAPPQAYERGADGKRPWWRRALELFGTFNHKHGDVLTREDVAEYRKQKAREELPVTDPERHLGLRVSRVEDLAKGLVVDGDVDVNDL
Ga0105070_11117042	3300009815	Groundwater Sand	LDVAPPQAYERAADGKRAWWRRALELFGTFRRKRGAVLTREDVAEYRKQKAREELPVTDPERHLGLRVSRVEDLAKGLVVDGDVD
Ga0105058_11707401	3300009837	Groundwater Sand	MKHRHEDELARVLDVAPPQAYERGADGKRSWWRRALELFGTFRRKHGDGLTREDVAEYRKQKAREELPLTDPERHLGLRVSRLEDIAK
Ga0126384_107993141	3300010046	Tropical Forest Soil	VKHEPEAQLARVLDVAPPQAYERGSSGKRAWWRRALELFGTFRRKHRASLTREDVAEYSKQKAREELPVTDPERHLGLRVSGLEDLARGLVVDGDVD
Ga0126384_108792272	3300010046	Tropical Forest Soil	VKHEPEAELARVLDVAPPRAYERGTGGRRAWWRRALELFSTFKRNHGYALTREDVAEYSKQKAREELPVTD
Ga0126370_111353171	3300010358	Tropical Forest Soil	VKHQPEAELSRVLDVAPPQAYERGTAGKRAWWRRALELFGTFRRKHGASLTREDVAEYGKQKAREGLPVTD
Ga0126370_111802501	3300010358	Tropical Forest Soil	VKHEQEGELARVLDVATPRAYERGADGKRAWWRRALELFGTFRRKHGDVLTREDVAEYRKQKAREQLPVTDPERHLGL
Ga0126376_104456822	3300010359	Tropical Forest Soil	VKHEPEAELARVLDVAPPQAYERGTAGKRAWWRRALELFGTFRRNHGASLTREDVAEYGKQKAREELPVTDPERHLMLRVSRLEDLAR
Ga0126378_105760221	3300010361	Tropical Forest Soil	VKHQPEAELSRVLDVAPPQAYERNAAGKRAWWRRALELFGTFRRKHRASLTREDVAEYSKQKAREELPVTDPERHLGLRVSRLEDLARGLVVDG
Ga0126378_125078981	3300010361	Tropical Forest Soil	VKHEPEAELARVLDVAPPQAYERGTAGKRAWWRRALELFGTFRRKHGASLTREDVAEYGKQKAREGLPVTDPERHLMLRVSRLEDLAKGLVV
Ga0126377_132518761	3300010362	Tropical Forest Soil	MQAKHEHERKLARVLGVAPPQPYERGADGKRSWWRRALELFGSFKRKHGDLLTREDVAEYRAQRARDELPLTDPERHLGLRVSRLDDLAKGL
Ga0126377_134845112	3300010362	Tropical Forest Soil	VKHESKLARVLDVAHPEAYERGADGKRAWSRRALELFGTFGRKHGDSLTREDVAEYRKQKEREELPVTDPERHLGLRVSRLEDIARGLVVDGDVELNDLGDGAEGGIDES
Ga0126379_106959511	3300010366	Tropical Forest Soil	VKHEPEAELARVLDVAPPQAYERGAAGKRAWWRRSLELFGTFRRKHRTALTREDVAEYSKQKAREELPVTDP
Ga0134128_126838382	3300010373	Terrestrial Soil	VQHEDEDELARALEMAPPQAYERGADGKRAWWRRALDLFGTFRRKQGDALSREDVAEYRKQKAREELPVTDPERHLGLRVSRLEDMAKGLVVYGDV
Ga0105239_121222682	3300010375	Corn Rhizosphere	VQHEDEDELARALEMVPPQAYERGADGKRAWWRRALDLFGTFRRKQGDALSREDVVEYRKQKAREELPVTDPERHLGLRVSRLEDMA
Ga0134121_104130801	3300010401	Terrestrial Soil	MQVKKHEHEGKLARLLGVAPPQAYERGADGKRVWWRRALELFGTFKRKHGDLLTREDVAEYRAQKAREELPVTDPERHLGLRVS
Ga0134121_126028102	3300010401	Terrestrial Soil	VKHEDEDELARALEMAPPQAYERGADGKRAWWRRALDLFGTFRRKQGDALSREDVAEYRKQKAREELPVTD
Ga0134123_105127851	3300010403	Terrestrial Soil	MQVKKHEHEGKLARLLGVAPPQAYERGADGKRVWWRRALELFGTCKRKHGDLLTREDVVEYRRRKARAELPVTDPERHLGLW
Ga0157298_102491502	3300012913	Soil	PCTVKHEHEGELARALETAPPRAYEREADGKRAWWRRALDLFGTFRRKQGDALSREDVVEYRKQKAREELPVTDPERHLGLRVSRLEDMAKGLATTRLAATVRPRLPASRG*
Ga0126375_103799371	3300012948	Tropical Forest Soil	VKHEPEAELARVLDVAPPQAYERGTAGKRAWWRRALELFSTFRRKHGDALTREDIAEYSKQKAREELPVTDPERYLKLRVS
Ga0164309_109200451	3300012984	Soil	MKHEHENKLARVLNVAPPQAYERGADGKRSWWRRALDLFGTFRRKHGDALTREDVAEYRKQKAREGLPVTDPERHLGLRVSRLEDLAKGLVVDGDVEVNDLGDNFEVKDDEYGAEVNSGY
Ga0164309_118144031	3300012984	Soil	VKHEHEDELARALEMAPPQAYEREADGKRAWWRRALDLFGMFRKQHAPSREDVAEYHKQKAREELPVTDPE
Ga0164307_114604461	3300012987	Soil	VKHEHEGELARALEMAPPRAYEREADGKRAWWRRALDLFGTFRRKHSDALTREDVAEYRKQKAREELPVTDPERHLGLRVSRLEDMAKGLLVDGDVEFNDLG
Ga0164306_106712871	3300012988	Soil	VKHEHEGELARALEMAPPRAYEREAEGKRAWWRRALDLFGTFRRKQGDALSREDVAEYRKQKAREELPVTDPERHLG
Ga0164305_111073371	3300012989	Soil	VKHEHEGELARALEMAPPRAYEREADGKRAWWRRALDLFGTFRRKQGDALSREDVVEYRKQKAREELPVTDPERHLGLRVSRLEDMAKGLVVDGDVEFNDLGDNFDVKDDK
Ga0157374_108537631	3300013296	Miscanthus Rhizosphere	VKHEDEDELARALEMAPPQAYERGADGKRAWWRRALDLFGTFRRKQGDALSREDVVEYRKQKAREELPVTDPERHLGLRVSRLEDMAKGLV
Ga0157374_114253181	3300013296	Miscanthus Rhizosphere	VKHEHEGELARALEMAPPRAYEREADGKRAWWRRALDLFGTFRRKQGDAMSREDVAEYRKQKAREELPVTDPERYLG
Ga0157380_101418326	3300014326	Switchgrass Rhizosphere	VKHEDEDELARVLDMAAPQAYTRDADGKRPWWRRALELFGTFSRKHGDTLTREDVAEYRKRKEREKLPVTDPE
Ga0157380_127506831	3300014326	Switchgrass Rhizosphere	MQVKKHEHEGKLARLLGVAPPQAYERGADGKRVWWRRALELFGTFKRKHGDLLTREDVAEYRKQKAREELPVTDPERHLGLRVSRV
Ga0157376_122572621	3300014969	Miscanthus Rhizosphere	MKHEHENKLARVLNVAPPQAYERGADGKRSWWRRALEIFGTFNRKHGDLLTREDVAEYRAQKAREELPVTDPERHLGLRVSRLDDL
Ga0132258_100147339	3300015371	Arabidopsis Rhizosphere	MQVKHEHESKLARVLDVAPPQAYERGADGKRSWWRRALDLFGTFKGRHGDVLTREDVAEYRKQKARQELPVTDPERHLALRVSRVEDLAKGLVVPVMST*
Ga0132256_1011629492	3300015372	Arabidopsis Rhizosphere	VKHEDEDELARALEMAPPQAYERGADGKRAWWRRALDLFGTFRRKQGDALSREDVAEYRKRKAREELPVTDPERHLGLRVSRLEDMAKGLVVDGDVEFNDLGDNFDVKKDDYGAEPN
Ga0182035_107329322	3300016341	Soil	VKHEGELARVLDIAPPQAYERGTDGRRSWWRRALGLFRTFRRTHGEALTREDVAEYRKQKAREALPVTDPERYLGFRASRLEDLAKGLVV
Ga0182034_100609043	3300016371	Soil	VKHEPEAELARVLDVAPPQAYERGTAGKRTWWRRALELFGTFRRKHGASLTREDVAEYSKQKAREELPVTDPERHLMLRVSRLEDLAK
Ga0187765_105106331	3300018060	Tropical Peatland	VKHEPEAELARVLDVAPPQAYERGSAGKRAWWRRALELFGTFRRKQGGSLTREDVAEYSKQKAREELPVTDPERHLGLRVSRLEDLAKGLVVD
Ga0190265_104127323	3300018422	Soil	VKHKHDGDLSRVLDVAPPQAYQRGADAKRSWWRRALELFGTFRGKHGDALTREDVAEYRRQKAREQLPITDPERHLGLRVSRLEDIA
Ga0190272_111900142	3300018429	Soil	VKHESDLARVLDVAPPPAYERGAEGKRAWWRRALELFGTFRRKQGHVLTREDVAEYRKQKAREELPVTDPERHLGLRVSRLEDLAKGLVVDGDVEFNDLDDNFEAKDDEYCAELNT
Ga0190270_103611511	3300018469	Soil	VKHEYEGELARLLGVAPPQAYERGADGKRSWWRRAIDLFGTFRRKHGDALTREDVAEYRNSKARGELPVTDPERHLGLRVSRLEDLAK
Ga0190270_127418781	3300018469	Soil	VKHKHEGELSRVLDVAPPPAYERGADGKRSWWRRALELFGTFRGKHGDALTREDIAEYRKQKAREELPVTDPERHLGLRVSRLEDIAKGLVVDGDVDLNDLGENFEIKDAEFGTEPN
Ga0210382_104595941	3300021080	Groundwater Sediment	VKHESELARVLDVAPPPAYERGADGKRVWWRRALELFGTFRRKQGDVLTRENVAQYRKQKAREELPVTDPERHLGLRVSRLEDMAKGLVVDGDV
Ga0207684_100431981	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MKHEHENKLARVLNVAPPQAYERGADGKRSWWRRALELFGTFNRKHGDLLTREDVAEYRAQKAREELPVTDPERHLGLRVSRLDDLAKGLIVDGDV
Ga0207654_108525631	3300025911	Corn Rhizosphere	MKHEHENKLARVLNVAPPQAYERGADGKRSWWRRALELFGTFNRKHGDLLTREDVAEYRAQKAREELPVTDPERHLGLRVSRLDDLAKGLI
Ga0207649_114635911	3300025920	Corn Rhizosphere	VKHEHEGELARALETAPPRAYEREADGKRAWWRRALDLFGTFRRNQGDALSREDVSEYRKQKAREELPVTDPERHLGLRVSRLEDMPRGL
Ga0207681_114798141	3300025923	Switchgrass Rhizosphere	MKHEHENKLARVLNVAPPQAYERGADGKRSWWRRALELFGTFNRKHGDLLTREDVAEYRAQKAREELPVTDPERHLGLRVSRLDDLAKGLIVDG
Ga0207711_115127171	3300025941	Switchgrass Rhizosphere	VKHEDEDELARALEMAPPQAYERGADGKRAWWRRALDLFGTFRRKQGDALSREDVAEYRKQKAREELPVTDPERHLGLRVSRLEDMAKGLVVDGDVEFNDLGDNFDVKEDESGAEA
Ga0207679_106958481	3300025945	Corn Rhizosphere	MKHEHENKLARVLNVAPPQAYERGADGKRSWWRRALELFGTFNRKHGDLLTREDVAEYRAQKAREELPVTDPERHLGLRVSRLDDLAKGLIVDGDVDLN
Ga0207658_111801962	3300025986	Switchgrass Rhizosphere	MKHEHENKLARVLNVAPPQAYERGADGKRSWWRRALELFGTFKRKHGDLLTREDVAEYRKQKAREELPVTDPERHLG
Ga0207703_107215431	3300026035	Switchgrass Rhizosphere	MQVKKHEHEGKLARLLGVAPPQAYERGADGKRVWWRRALELFGTFKRKHGDLLTREDVAEYRKQKAREELPVTDPERHLGLRVSRVEDLAKGLVVDGD
Ga0207641_110475092	3300026088	Switchgrass Rhizosphere	MQVKKHEHEGKLARLLGVAPPQAYERGADGKRVWWRRALELFGTFKRKHGDLLTREDVAEYRKQKAREELPVTDPERHLGLRVSRVEDLAKGLVVDGDADLNDLGDNSQIKDDDSGSQPNTGHS
Ga0207675_1018845471	3300026118	Switchgrass Rhizosphere	VKHKHEGELSRVLDVAPPQAYERGADGRRSWWRRVLELFGTFRGKHGDALTREDVAEYRKQKAREELPVTDPERHLGLRVSRLDDIAKGLVVDGDVDLNDLGENFEVKDEGFGLEPNTGY
Ga0209874_11361441	3300027577	Groundwater Sand	MKHRHEDELARVLDVAPPQAYERGADGKRSWWRRALELFGTFRRKHGDGLTREDVAEYRKQKAREELPLTDPERHLGLRVSRLEDIAKGLVVDGDVELNDLGDSFDI
Ga0209481_100399365	3300027880	Populus Rhizosphere	VKHKHEGELARVLDVAPPQAYERGADAKRPWWRRALELFSTFKAKHGDALTREDVAEYRKQKAREELPVTDPERHLGLRVSRGGYRQRLGGRR
Ga0209481_107020001	3300027880	Populus Rhizosphere	VKHKHEGELSRVLDVGPPQAYERGADGKRSWWRRALKLFGTFRGKHGEALTREDVAEYRKQKARDELPVTDPERHLGLRVSRVDDLAKGLVVDGDVDINDLGENFEIKDEDF
Ga0207428_105333172	3300027907	Populus Rhizosphere	VKHKHEGELARVLDVAPPQAYDRGADSKRPWWRRALELFSTFKGKHGDALTREDVAEYRKQKAREELPVSDPERHLGLRVSRLEDLAKGLVVDGDVELNDLGDNFEIKDGDFGPEPNTG
Ga0209382_102675811	3300027909	Populus Rhizosphere	MQMKHEHESKLARVLNVTPPQAYERGADGKRSWWRRALELFGTFKRKHGDLLTRDDVAEYRTQQAREELP
Ga0268264_121010441	3300028381	Switchgrass Rhizosphere	VKHEDENELARALEMAPPQAYERGADGKRAWWRRALDLFGTFRRKQGDALSREDVAEYRMQKAREELPV
Ga0247822_104850201	3300028592	Soil	VKHKHEGELSRVLDVAPPQAYERGADGKRSWWRRALELFGTFRGKHGDALTREDVAEYRKQKAREELPVTDPERHLGLRVSRLEDIAKGLVVDGDVDVNDLGENFGIKDDEFG
Ga0247822_109008442	3300028592	Soil	VKHKHEGELSRVLDVGPPQAYERGADGKRSWWRRALKLFGTFRGKHGEALTREDVAEYRKQKARDELPVTDPERHLGLRVSRVD
Ga0247822_112167092	3300028592	Soil	LRITSLCTRSKSDLWPVKHESELARILDVAPPEAYERGADGRRAWWRRALELFGTFRRNHGDALTREDVAEFRKHKAREELPVTDPERHLGLRVSRLEDAAKGLVVDGDVEL
Ga0318573_104405291	3300031564	Soil	VKHEPEAELARVLDVAPPQAYERGTAGKRTWWRRALELFGTFRRKHGASLTREDVAEYSKQKAREELPVTDPERHLMLRVSRLEDLAKGLVVDGDVDVNDLGDTFEVKEDE
Ga0318515_105798081	3300031572	Soil	VKHEGKLARVLDIAPPQAYERGTDGRRSWWRRALGLFSTFRRKHGDALTREDVAEYRKHKAREYLPVTDPERHLGFRVSRLE
Ga0318560_107190491	3300031682	Soil	VKNDTHESELARLLGVGPPPAYEREAGGKRTWWRRALELFGTFKRKHGHLLTREDVVEYRDQQQREE
Ga0318521_106786661	3300031770	Soil	VKHEPEAELARVLDVAPPQAYERGTAGKRTWWRRALELFGTFRRKHGASLTREDVAEYSKQKAREELPVTDPERHLMLRVSRLEDLAKGLVVDGDVDVNDLGDTFEVKE
Ga0318546_104265481	3300031771	Soil	VKHEPEAELARVLDVAPPQAYERGIAGKRRTWWRRALELFGTFRRKHGASLTREDVAEYSKQKAREELPVTDPERHLMLRVSRLEDLAKGLVVDGDVDVNDLGDTFEVKEDEYGPEPNT
Ga0318548_105565341	3300031793	Soil	VKHEPEAELARVLDVAPPQAYERGTAGKRTWWRRALELFGTFRRKHGASLTREDVAEYSKQKAREELPVTDPERHLMLRVSRLEDLAKGLVVDGDVDVNDLGDTFEVKEDEYGPEPN
Ga0318503_102800142	3300031794	Soil	VKHEPEAELARVLDVAPPQAYERGTAGKRTWWRRALELFGTFRRKHGASLTREDVAEYSKQKAREELPVTDPERHLMLRVSRLEDLAKG
Ga0318544_103510731	3300031880	Soil	VKHEPEAELARVLDVAPPQAYERGTAGKRTWWRRALELFGTFRRKHGASLTREDVAEYSKQKAREELPVTDPERHLMLRVSRLEDLAKGLVVDGDVDVNDLGDTFEVKED
Ga0306925_103680023	3300031890	Soil	VKHEPEAELARVLDVAPPQAYERGTAGKRTWWRRALELFGTFRRKHGASLTREDVAEYSKQKAREELPVTDPERHLMLRVSRLEDLAKGLVVDGDVDVNDLGDTF
Ga0306923_125502491	3300031910	Soil	VKHEHKGELARVLDVALPQAYERGTGGRRWWWRRALGFFSTFQRKHGDALTREDVAEYRKHKAREELPVTDPERHLGMRVSRLEDLAKGLVVDGDIELNDLGDNFE
Ga0310910_107176941	3300031946	Soil	VKHEGELARVLDIAPPQAYERGTDGRRSWWRRALGLFSTFRRKQGDALTREDVAEYRKHKAREDLPVTDPERHLGF
Ga0310906_111769391	3300032013	Soil	VKHKNEGELSRVLDVAPPQAYERGADGKRSWWRRALKLFGTFRGKHGEALTREDVAEYRKQKARDELPVTDPERHLGLRVSRLEDMAKGLVVDGDVDLNDLGENFEIKDAEFGTEPNS
Ga0318575_105177481	3300032055	Soil	VKHEPEAELARVLDVAPPQAYERGIAGKRRTWWRRALELFGTFRRKHGASLTREDVAEYSKQKAREELPV
Ga0318504_106239491	3300032063	Soil	VKHEPEAELARVLDVAPPQAYERGTAGKRTWWRRALELFGTFRRKHGASLTREDVAEYSKQKAREELPVTD
Ga0310890_106972102	3300032075	Soil	VKHESELARILDVAPPEAYERGADGRRAWWRRALELFGTFRRNHGDALTREDVAEFRKHKAREELPVTDPERHLGLRVSRLEDAAKGLVVDGDVELNDLGDNGEAKDD
Ga0307470_104665721	3300032174	Hardwood Forest Soil	VKQKHEGELARVLNVAPPQAYDRGADAKRSWWRRAITLFATFKRKQGPALTREDVAEYRKQKAREQLPVTDPERHLGLRVSRLDDFAKGLVVDGDVEVNDLGDNFQIREADDARE
Ga0307470_117210301	3300032174	Hardwood Forest Soil	VKEKHEGELARVLNVAPPQAYDRGAEGKRSWWRRAITLFGTFKGKHGDALTREDVAEYKKQKAREALPVTDPER
Ga0307471_1006945891	3300032180	Hardwood Forest Soil	VKQKHEGELARVLNVAPPQAYDRGADAKRSWWRRAITLFATFKRKQGPALTREDVAEYRKQKAREQLPVTDPERHLGFRVSRLDD
Ga0318519_106216101	3300033290	Soil	VKHEPEAELARVLDVAPPQAYERGTAGKRTWWRRALELFGTFRRKHGASLTREDVAEYSKQKAREELPVTDPERHLMLRVSRLEDLAKGLVVDGDV
Ga0364935_0125659_463_801	3300034151	Sediment	VKHKHERELSRVLDVAPPQAYDRGADGERSWWRRALELFGTFRGKHGDALTREDVAEYRKQKAREELPVTDPERHLGLRVSRLEDIAKGLVVDGDVDINDLGENSEVKDEEFG

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F056790

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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