Metagenome / Metatranscriptome Family F056833

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F056833
Family Type	Metagenome / Metatranscriptome
Number of Sequences	137
Average Sequence Length	69 residues
Representative Sequence	MRRAYPSAAIDITKSEATATSLTTIVAKAEGVRTDLPPGAPVPPDLAVECRFDENILTGFRWTAGPTR
Number of Associated Samples	110
Number of Associated Scaffolds	137

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	31.34 %
% of genes near scaffold ends (potentially truncated)	62.04 %
% of genes from short scaffolds (< 2000 bps)	77.37 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.350 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (36.496 % of family members)
Environment Ontology (ENVO)	Unclassified (29.927 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (60.584 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 29.17% Coil/Unstructured: 70.83%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 137 Family Scaffolds
PF04377	ATE_C	33.58
PF04376	ATE_N	25.55
PF00206	Lyase_1	4.38
PF06271	RDD	3.65
PF00291	PALP	2.19
PF10397	ADSL_C	1.46
PF07045	DUF1330	0.73
PF15035	Rootletin	0.73
PF02769	AIRS_C	0.73
PF07592	DDE_Tnp_ISAZ013	0.73

COG ID	Name	Functional Category	% Frequency in 137 Family Scaffolds
COG2935	Arginyl-tRNA--protein-N-Asp/Glu arginylyltransferase	Posttranslational modification, protein turnover, chaperones [O]	59.12
COG1714	Uncharacterized membrane protein YckC, RDD family	Function unknown [S]	3.65
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	0.73

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.35 %
Unclassified	root	N/A	3.65 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.35 %
Unclassified	root	N/A	3.65 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.35 %
Unclassified	root	N/A	3.65 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	96.35 %
Unclassified	root	N/A	3.65 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	87.59 %
Unclassified	root	N/A	3.65 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	50.36 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	6.57 %
Unclassified	root	N/A	3.65 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.73 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	50.36 %
Unclassified	root	N/A	3.65 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	1.46 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.73 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	50.36 %
Unclassified	root	N/A	3.65 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.73 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	0.73 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	0.73 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	50.36 %
Unclassified	root	N/A	3.65 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.73 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	0.73 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	0.73 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_100042687	All Organisms → cellular organisms → Bacteria → Proteobacteria	4094	Open in IMG/M
3300003368\|JGI26340J50214_10125106	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	650	Open in IMG/M
3300004080\|Ga0062385_10842286	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	604	Open in IMG/M
3300004080\|Ga0062385_11221910	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	515	Open in IMG/M
3300004082\|Ga0062384_100090804	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1609	Open in IMG/M
3300004082\|Ga0062384_100294281	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1005	Open in IMG/M
3300004092\|Ga0062389_103511355	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	588	Open in IMG/M
3300005178\|Ga0066688_10039319	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2676	Open in IMG/M
3300005179\|Ga0066684_10002697	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	7454	Open in IMG/M
3300005184\|Ga0066671_10184932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1242	Open in IMG/M
3300005184\|Ga0066671_10317987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	981	Open in IMG/M
3300005363\|Ga0008090_15858288	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2215	Open in IMG/M
3300005434\|Ga0070709_10003361	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	8601	Open in IMG/M
3300005436\|Ga0070713_100119001	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2313	Open in IMG/M
3300005437\|Ga0070710_10280596	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1081	Open in IMG/M
3300005439\|Ga0070711_100189249	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1580	Open in IMG/M
3300005467\|Ga0070706_100108238	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2586	Open in IMG/M
3300005471\|Ga0070698_100003260	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	17827	Open in IMG/M
3300005561\|Ga0066699_10107871	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1847	Open in IMG/M
3300005575\|Ga0066702_10657656	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	626	Open in IMG/M
3300005764\|Ga0066903_101469913	All Organisms → cellular organisms → Bacteria → Proteobacteria	1285	Open in IMG/M
3300005764\|Ga0066903_103353665	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	865	Open in IMG/M
3300005921\|Ga0070766_10160388	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1384	Open in IMG/M
3300005921\|Ga0070766_10482419	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	822	Open in IMG/M
3300006034\|Ga0066656_10153830	Not Available	1440	Open in IMG/M
3300006173\|Ga0070716_100887709	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	697	Open in IMG/M
3300006893\|Ga0073928_10162087	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1792	Open in IMG/M
3300006954\|Ga0079219_10227837	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1085	Open in IMG/M
3300007788\|Ga0099795_10088078	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1199	Open in IMG/M
3300010360\|Ga0126372_10711728	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	982	Open in IMG/M
3300010366\|Ga0126379_12971652	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	567	Open in IMG/M
3300012212\|Ga0150985_111977786	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1306	Open in IMG/M
3300012582\|Ga0137358_10494524	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	824	Open in IMG/M
3300012582\|Ga0137358_11116448	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	501	Open in IMG/M
3300012927\|Ga0137416_10265225	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1409	Open in IMG/M
3300012971\|Ga0126369_10908830	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	966	Open in IMG/M
3300012971\|Ga0126369_13413357	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	520	Open in IMG/M
3300012971\|Ga0126369_13646918	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	504	Open in IMG/M
3300016270\|Ga0182036_10597845	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	884	Open in IMG/M
3300016294\|Ga0182041_11159918	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	703	Open in IMG/M
3300016341\|Ga0182035_10227657	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1492	Open in IMG/M
3300016357\|Ga0182032_10247620	All Organisms → cellular organisms → Bacteria → Proteobacteria	1383	Open in IMG/M
3300016387\|Ga0182040_10396643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1082	Open in IMG/M
3300016404\|Ga0182037_10799977	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	813	Open in IMG/M
3300016445\|Ga0182038_10557449	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	984	Open in IMG/M
3300018431\|Ga0066655_10868225	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	615	Open in IMG/M
3300020579\|Ga0210407_10649013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	820	Open in IMG/M
3300020580\|Ga0210403_10004783	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	11606	Open in IMG/M
3300020580\|Ga0210403_10429971	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1076	Open in IMG/M
3300020582\|Ga0210395_10047803	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3132	Open in IMG/M
3300020583\|Ga0210401_10125767	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2404	Open in IMG/M
3300020583\|Ga0210401_10159542	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2106	Open in IMG/M
3300020583\|Ga0210401_11632636	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	502	Open in IMG/M
3300021088\|Ga0210404_10356653	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	812	Open in IMG/M
3300021170\|Ga0210400_10181857	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1704	Open in IMG/M
3300021170\|Ga0210400_11134729	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	632	Open in IMG/M
3300021178\|Ga0210408_10409404	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1080	Open in IMG/M
3300021180\|Ga0210396_10212169	All Organisms → cellular organisms → Bacteria → Proteobacteria	1727	Open in IMG/M
3300021377\|Ga0213874_10120343	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	892	Open in IMG/M
3300021377\|Ga0213874_10437430	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	514	Open in IMG/M
3300021388\|Ga0213875_10455525	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	612	Open in IMG/M
3300021403\|Ga0210397_10779823	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	737	Open in IMG/M
3300021403\|Ga0210397_10930037	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	674	Open in IMG/M
3300021406\|Ga0210386_10013302	All Organisms → cellular organisms → Bacteria → Proteobacteria	6433	Open in IMG/M
3300021406\|Ga0210386_10570703	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	977	Open in IMG/M
3300021420\|Ga0210394_11115037	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	680	Open in IMG/M
3300021420\|Ga0210394_11530932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	563	Open in IMG/M
3300021474\|Ga0210390_10692548	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	850	Open in IMG/M
3300021478\|Ga0210402_10619818	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1002	Open in IMG/M
3300021478\|Ga0210402_11529825	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	594	Open in IMG/M
3300021559\|Ga0210409_10185028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1901	Open in IMG/M
3300021559\|Ga0210409_10973684	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	722	Open in IMG/M
3300021560\|Ga0126371_10165308	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2286	Open in IMG/M
3300022717\|Ga0242661_1160814	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	509	Open in IMG/M
3300025898\|Ga0207692_10770218	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	628	Open in IMG/M
3300025905\|Ga0207685_10011933	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2634	Open in IMG/M
3300025910\|Ga0207684_10089682	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2620	Open in IMG/M
3300025915\|Ga0207693_10027991	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	4455	Open in IMG/M
3300025916\|Ga0207663_10037185	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2933	Open in IMG/M
3300025939\|Ga0207665_11388334	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	559	Open in IMG/M
3300026312\|Ga0209153_1139584	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	914	Open in IMG/M
3300026552\|Ga0209577_10372450	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1042	Open in IMG/M
3300027069\|Ga0208859_1001882	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2080	Open in IMG/M
3300027073\|Ga0208366_1029285	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	614	Open in IMG/M
3300027605\|Ga0209329_1000766	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	4226	Open in IMG/M
3300027610\|Ga0209528_1065312	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	805	Open in IMG/M
3300027701\|Ga0209447_10035362	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1389	Open in IMG/M
3300027703\|Ga0207862_1254324	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	514	Open in IMG/M
3300027727\|Ga0209328_10091109	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	932	Open in IMG/M
3300027729\|Ga0209248_10008839	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3176	Open in IMG/M
3300027729\|Ga0209248_10217483	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	561	Open in IMG/M
3300027737\|Ga0209038_10010203	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2753	Open in IMG/M
3300027824\|Ga0209040_10152188	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1248	Open in IMG/M
3300027829\|Ga0209773_10163847	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	927	Open in IMG/M
3300027882\|Ga0209590_10185469	All Organisms → cellular organisms → Bacteria → Proteobacteria	1309	Open in IMG/M
3300027889\|Ga0209380_10188569	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1210	Open in IMG/M
3300027903\|Ga0209488_10109193	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2077	Open in IMG/M
3300027903\|Ga0209488_10197487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1515	Open in IMG/M
3300028906\|Ga0308309_10585992	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	967	Open in IMG/M
3300031128\|Ga0170823_11494713	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	526	Open in IMG/M
3300031545\|Ga0318541_10005340	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	5393	Open in IMG/M
3300031546\|Ga0318538_10392217	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	751	Open in IMG/M
3300031546\|Ga0318538_10826932	Not Available	503	Open in IMG/M
3300031561\|Ga0318528_10271942	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	909	Open in IMG/M
3300031668\|Ga0318542_10130405	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1237	Open in IMG/M
3300031679\|Ga0318561_10512621	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	660	Open in IMG/M
3300031680\|Ga0318574_10343666	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	870	Open in IMG/M
3300031681\|Ga0318572_10513605	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	714	Open in IMG/M
3300031719\|Ga0306917_11215102	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	585	Open in IMG/M
3300031724\|Ga0318500_10198152	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	961	Open in IMG/M
3300031753\|Ga0307477_10703791	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	676	Open in IMG/M
3300031763\|Ga0318537_10049894	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1517	Open in IMG/M
3300031770\|Ga0318521_10011508	All Organisms → cellular organisms → Bacteria → Proteobacteria	3827	Open in IMG/M
3300031770\|Ga0318521_10039082	All Organisms → cellular organisms → Bacteria → Proteobacteria	2384	Open in IMG/M
3300031771\|Ga0318546_10215192	All Organisms → cellular organisms → Bacteria → Proteobacteria	1316	Open in IMG/M
3300031771\|Ga0318546_10226563	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1282	Open in IMG/M
3300031781\|Ga0318547_10167575	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1300	Open in IMG/M
3300031781\|Ga0318547_10187585	All Organisms → cellular organisms → Bacteria → Proteobacteria	1231	Open in IMG/M
3300031793\|Ga0318548_10511185	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	587	Open in IMG/M
3300031794\|Ga0318503_10117592	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	850	Open in IMG/M
3300031846\|Ga0318512_10472820	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	634	Open in IMG/M
3300031890\|Ga0306925_10003856	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	13396	Open in IMG/M
3300031890\|Ga0306925_10740893	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1025	Open in IMG/M
3300031890\|Ga0306925_11866498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	573	Open in IMG/M
3300031893\|Ga0318536_10215111	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	978	Open in IMG/M
3300031942\|Ga0310916_10887781	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	748	Open in IMG/M
3300031945\|Ga0310913_10542781	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	825	Open in IMG/M
3300031954\|Ga0306926_10563653	All Organisms → cellular organisms → Bacteria → Proteobacteria	1394	Open in IMG/M
3300031962\|Ga0307479_12172740	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	502	Open in IMG/M
3300032001\|Ga0306922_11980315	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	568	Open in IMG/M
3300032059\|Ga0318533_10126177	All Organisms → cellular organisms → Bacteria → Proteobacteria	1794	Open in IMG/M
3300032068\|Ga0318553_10195493	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1054	Open in IMG/M
3300032261\|Ga0306920_100025051	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	8416	Open in IMG/M
3300032261\|Ga0306920_101592522	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	929	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.08%
Host-Associated	Host-Associated	2.92%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.59%
Aquatic	Environmental → Aquatic	9.49%
Plants	Host-Associated → Plants	2.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.59%
Freshwater	Environmental → Aquatic → Freshwater	8.76%
Roots	Host-Associated → Plants → Roots	2.19%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.73%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	68.61%
Loam	Environmental → Terrestrial → Soil → Loam	18.98%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	8.76%
Unclassified	Host-Associated → Plants → Roots → Unclassified	2.19%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	49.63%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	9.49%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.49%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.49%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	8.76%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.30%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	2.19%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.46%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.73%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	36.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.95%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.49%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	8.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.57%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.11%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.38%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.38%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.19%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	2.19%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.46%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.46%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.73%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.73%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.73%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.73%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.73%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300021388	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8	Host-Associated	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022717	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027069	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF002 (SPAdes)	Environmental	Open in IMG/M
3300027073	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF010 (SPAdes)	Environmental	Open in IMG/M
3300027605	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027610	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027701	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1000426874	3300002245	Forest Soil	MRRAYPSAAIDITKSEATATSLTTIIAKAEGVRADVPPGAPVPHDLAAECRFDQNVLTGFRWTAGPTH*
JGI26340J50214_101251062	3300003368	Bog Forest Soil	YPSAAIDITKTEASATSLTMIVAKAEGVRTDVPAGAPIPHDLAVECQFDENVLTGFRWTAGPTH*
Ga0062385_108422862	3300004080	Bog Forest Soil	PRTIGLAERCADIMRRAYPSAAIDITKTEATVTSLTTIVATAEGVRTDAPPGAPAPQDLAVECRFDENILTGFRWTAGPTH*
Ga0062385_112219102	3300004080	Bog Forest Soil	AAIDITKSEASATSLTTIVAKAEGVRTDLPADSPLPHDLAVECRFDENVLTGFRWTAGPTH*
Ga0062384_1000908042	3300004082	Bog Forest Soil	MRRAYPSAAIDITKTEATVTSLTTIVATAEGVRTDAPPGAPAPQDLAVECRFDENILTGFRWTAGPTH*
Ga0062384_1002942811	3300004082	Bog Forest Soil	MRRAYPSAAIDIAKTEATATSLTTIVANAEGVRTDVPPGTPPPQNLAVECRFDENILTGFRWTAGPTH*
Ga0062389_1035113552	3300004092	Bog Forest Soil	CGGIPRDVGLAERCADIMRRAYPSAAIDITKTEATATSLTTIVAHAEGVRTDVPPGAPPPQDLAVECQFDKNIMIGFRWTAGPTH*
Ga0066688_100393194	3300005178	Soil	MRRAYPSAAIDITKSDATATSLTTIIAKAEGVRTDLPPGAPLPQNLAVECRFDENILTGFRWTVGPTH*
Ga0066684_100026976	3300005179	Soil	MRRAYPSAAIDIMKTDATATSLTTIIAKAEGVRTDLPPGAPLPQNLAVECRFDENILTSFRWTVGPTH*
Ga0066671_101849321	3300005184	Soil	MMRRAYPSAAIDITKSDATATSLTTIIAKAEGVRTDLPPGAPLPQNLAVECRFDENILTGFRWTVGPTH*
Ga0066671_103179872	3300005184	Soil	AIDITKSEASATSLTTIVAKAEGVRTDVPPGAALPQDLAIECRFDENILTGFRWTAGPTH
Ga0008090_158582883	3300005363	Tropical Rainforest Soil	MMRRAYPSAEIDITKSEASATSLTTIVAKAEGVRTDLPPDTPSARDLAVECRFDQNILTEFRWTAGPTH*
Ga0070709_100033617	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MRRAYPSAAIDITKTEASPTNLTTIIAKAEGLRTDLPADAPLPRDLAVECRFDENVLTGFSWTAGPTH*
Ga0070713_1001190012	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MRRAYPSAAIDITKSEATATSLTTIVAKAEGVRTDLPPGAPVPPDLAVECRFDENILTGFRWTAGPTR*
Ga0070710_102805961	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	AIDITKSEATATSLTTIVAKAEGIRTDLPPGAPVPPDLAVECRFDENILTGFRWTAGPTH
Ga0070711_1001892492	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MRRAYPSAAIDITKSEATATSLTTIIAKAEAVRPDVPPGAPVPHDLAVECRFDENVLTGFRWTAGPTH*
Ga0070706_1001082383	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MRRAYPSAAIDIAKSEASAPGLTTIIAKVEGVRTDTPPDSPLPRDLAAECHFDENILTGFHWTAGPTR*
Ga0070698_10000326010	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MRRAYPSAAIDIAKSEASAPGLTTIIAKVEGVRTDTPPDSPLPRDLAAECHFDENILTGFRWTAGPTR*
Ga0066699_101078712	3300005561	Soil	MQRAYPSAAIDITKSEASATSLTTIVAKAEGVRTDVPPGAALPQDLAIECRFDENILTGFRWTAGPTH*
Ga0066702_106576561	3300005575	Soil	PRDVGLAERCADIMQRAYPSAAIDITKSEASATSLTTIVAKAEGVRTDVPPGAALPQDLAIECRFDENILTGFRWTAGPTH*
Ga0066903_1014699133	3300005764	Tropical Forest Soil	DITKSEASATSLTTIVAKAEGIRTDLSTDDPLAHDLAVECRFDQNILTEFRWTVGPMH*
Ga0066903_1033536652	3300005764	Tropical Forest Soil	GLPHDVGLAERCADIMRRAYPSAAIDVTKNDASATSLTTIVARAEGVRTDTPPGAPMPRELAVECQFDQNILTGFRWTAGPSR*
Ga0070766_101603882	3300005921	Soil	MRRAYPNAAIDITKSESSATSLTTIVAKAEGVRTDLPADSPLLHDLAVECLFDENILTGFRWTAGPTH*
Ga0070766_104824191	3300005921	Soil	LAERCADIMRRAYPSAAIDITKSEATATSLTTIIAKAEGVRADVPPGAPVPHDLAVECRFDQNVLTGFRWTAGPTH*
Ga0066656_101538302	3300006034	Soil	VTDPKSDATATSLTTIIAKAEGVRTDLPPGALLPQNLAVECRFDENILTGFRWTVGPTH
Ga0070716_1008877092	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	ERCADIMRRAYPSAAIGITKTEASPTNLTTIIAKAEGLRTDLPADAPLPRDLAVECRFDENVLTGFSWTAGPTH*
Ga0073928_101620872	3300006893	Iron-Sulfur Acid Spring	MRRAYPSAAIDITNSEATATSLTTIIAKAEGVRADVPPGAPVPHGLTVECRFDENVLTGFRWTAGPTH*
Ga0079219_102278372	3300006954	Agricultural Soil	GLAERCADIMRRAYPTVAIDITKSEAAATSLTTIVAKVEGVRTDLPAGAALPQDLAVECRFDENVLTGFRWTAGPTR*
Ga0099795_100880783	3300007788	Vadose Zone Soil	TKSEATATSLTTIVAKAEGVRSDLPPGAPAPPDLAVECRFDENILTGFRWTAGPTH*
Ga0126372_107117282	3300010360	Tropical Forest Soil	CVEIVKSAYPSAAIDITKSEATATSFTTIVAHVEGLRTDLSPEAPLRRELAAECRFDENVLTEFHWTAGPMH*
Ga0126379_129716522	3300010366	Tropical Forest Soil	MRRAYPNAALDITKSEASATGLTTIIARVEGARTDTPPDSPLPRDLAVECRFDENVLTGFRWTAGPTS*
Ga0150985_1119777863	3300012212	Avena Fatua Rhizosphere	VIPRNIGLAERCADIMRRAYPSAALDITKSEATATSLTTIVAKAEGVRTDLPPGAPVPPDLAVECRFDENILTGFRWTAGPTH*
Ga0137358_104945242	3300012582	Vadose Zone Soil	ITKSEAAATSLTTIVARVDGLKTDLPPDAPLPRDLAVECRFDENVLTGFRWTAGPTR*
Ga0137358_111164481	3300012582	Vadose Zone Soil	LGLAERCADIMRRAYPSAAIDITKSEATATSLTTIIAKAEAVRPDVPPGAPVPHDLAVECRFDENVLTGFRWTAGPTH*
Ga0137416_102652252	3300012927	Vadose Zone Soil	MRRAYPSATIEITKSEAAATTLTTITARVEGSRTDIPPDGPLPRNLAVECRFDENVLTGFRWTAGPTR*
Ga0126369_109088301	3300012971	Tropical Forest Soil	TIPDVGLAERCADIMRRAYPSASIDITKREASATGMTTIMATVEGVRADLAPDQPLVQNLAVECRFDENILTGFRWTAGPKS*
Ga0126369_134133571	3300012971	Tropical Forest Soil	RDVGLAERCADIMRRAYPSATIDITKREASATSMTTIMATVEGVRTDLAPDQPLAQNLAVECRFDENVLTGFHWTAGPKS*
Ga0126369_136469182	3300012971	Tropical Forest Soil	AKRCADIMRRAYPSATIDITKREASATGMTTIMATVEGVRTDLAPDQPLVQNLAVECRFDENILTGFSWTAGPKS*
Ga0182036_105978451	3300016270	Soil	ERCADIMQRAYPSAGIDITKSEASATSLTSIVAKVEGVTTDTPPDNPVPRDLAVECQFDENILTGFRWTAGPTH
Ga0182041_111599182	3300016294	Soil	LAERCADIMQRAYPSAGIDITKSEASATSLTSIVAKVEGVRTDTPPDNPLPRDLAVECQFDENILTGFRWTAGPTH
Ga0182035_102276572	3300016341	Soil	MRRAYPSAAIDITKTDATTTSLTTIVANAEGVRTDVPPGAPVRQDLAVECRFDENILTGFRWTAGPTH
Ga0182032_102476201	3300016357	Soil	IMQRAYPSAGIDITKSEAAATSLTSIVAKVEGVRTDTPPDHPLPRDLAVECQFDENILTGFRWTAGPTH
Ga0182040_103966431	3300016387	Soil	IMRRAYPNAALDITKSEASATGLTTIIARVEGARTDTPPDSPLPRDLAVECRFDENVLTGFRWTAGPTS
Ga0182037_107999772	3300016404	Soil	YPSAQIEITKSDAAATSLTTIIAHVEGSRSDVPPDGPSARDLAVECRFDENVLTGFHWTAGPTR
Ga0182038_105574491	3300016445	Soil	DIMQRAYPSAGIDITKSEASATSLTSIVAKVEGVRTDTPPDNPLPRDLAVECQFDENILTRFRWTAGPTH
Ga0066655_108682251	3300018431	Grasslands Soil	IDITKSDATATSLTTIIARAEGVRTDLPPGAPLPQNLAVECRFDENILTSFRWTVGPTH
Ga0210407_106490131	3300020579	Soil	MRRAYPSAAIDITKSEATATSLTTIIAKAEGVRADVPPGAPVPHDLAAECRFDQNVLTGFRWTAGPTH
Ga0210403_100047839	3300020580	Soil	MRRAYPNAAIDITKSESSATSLTTIVAKAEGVRTDLPADSPLLHDLAVECLFDENILTGFRWTAGPTH
Ga0210403_104299711	3300020580	Soil	LAERCADIMRRAYPSAAIDITKSEATATSLTTIIAKAEGVRADVPPGAPVPHDLAVECRFDQNVLTGFRWTAGPTH
Ga0210395_100478035	3300020582	Soil	MRRAYPSAAIDITKSEATATSLTTIIAKAEGVRADVPPGAPVPHDLAVECRFDENVLTGFRWTAGPTH
Ga0210401_101257673	3300020583	Soil	MRRAYPNASIDITKTAATVTNLTTIVATAEGVRTDVPPGAPVRQDLAVECRFDENILIGFRWTAGPTH
Ga0210401_101595422	3300020583	Soil	LAERCADIMRRAYPSAAIDITKTEAAATSLTTIVATAEGVRTDVPPGAPPPQNLAVECRFDENILTGFRWTAGPTH
Ga0210401_116326361	3300020583	Soil	MRRAYPSAAIDIAKSEASAPGLTTIIAKVEAVRTDTPPDSPLPRDLAAECHFDENILTGFRWTAGPTR
Ga0210404_103566532	3300021088	Soil	LAERCADIMRRAYPSAAIDITKSEATATSLTTIIAKAEGVRADVPPGAPVPHDLAVECRFDENVLTGFRWTAGPTH
Ga0210400_101818571	3300021170	Soil	SAAIDTTKSEATATSLTTIIAKAEGVRADVPPGAPVPHDLAAECRFDQNVLTGFRWTAGPTH
Ga0210400_111347292	3300021170	Soil	MRRAYPNAAIDITKSESSATSLTTIVAKAEGVRTDLPADSPLLHDLAVECRFDENI
Ga0210408_104094041	3300021178	Soil	PHDVGAAERCADIMRRAYPNASIDITKTAATVTNLTTIVATAEGVRTDVPPGAPVRQNLAVECRFDENILTGFRWTAGPTH
Ga0210396_102121691	3300021180	Soil	DVGAAERCADIMRRAYPNASIDITKTAATVTNLTTIVATAEGVRTDVPPGAPVRQNLAVECRFDENILTGFRWTAGPTH
Ga0213874_101203432	3300021377	Plant Roots	AIDITKTEATATSLTTIVATAEGVRTDVPPGAPIRQDLAVECRFDENILTGFRWTAGPTH
Ga0213874_104374301	3300021377	Plant Roots	RAYPSAAIEVRKSEASAVNLTTIIAKAEGVRTDLPADAPLAHDLAVECRFDQSILTEFRWTAGPMR
Ga0213875_104555252	3300021388	Plant Roots	LAERCADMMQRAYPSAAIEVRKSEASAVNLTTIVAKAEGVRTDLPADAPLPHELAVECRFDQSILTEFRWTAGPMR
Ga0210397_107798231	3300021403	Soil	MRRAYPNASIDITKTAATVTNLTTIVATAEGVRTDVPPGAPIRQNLAVECRFDENILTGFRWPAGP
Ga0210397_109300372	3300021403	Soil	YPSAAIDITKSEATATSLTTIIAKAEAVRPDVPPGAPVPHDLAVECRFDENVLTGFRWTAGPTH
Ga0210386_100133025	3300021406	Soil	MRRAYPNASIDITKTAATVTNLTTIVATAEGVRTDVPPGAPVRQNLAVECRFDENILTGFRWTAGPTH
Ga0210386_105707031	3300021406	Soil	DIMRRAYPSAAIDITKSEATATSLTTIIAKAEGVRADVPPGAAVPHDLAVECRFDENVLTGFRWTAGPTH
Ga0210394_111150371	3300021420	Soil	SAAIDITKSEATATSLTTIIAKAEGVRADVPPGAPVPHDLAAECRFDQNVLTGFRWTAGPTH
Ga0210394_115309321	3300021420	Soil	RAYPSAAIGITKTEASPTNLTTIIAKAEGLRTDLPADAPLPRDLAVECRFDENVLTGFSWTAGPTH
Ga0210390_106925482	3300021474	Soil	MRRAYPNAAIDITKSESSATSLTTIVAKAEGVRTDLPADSPLLHDLAVECRFDENILIGFRWTAGPTH
Ga0210402_106198181	3300021478	Soil	MRRAYPNASIDITKTAATVTNLTTIVATAEGVRTDVPPGAPIRQNLAVECRFDENILTGF
Ga0210402_115298251	3300021478	Soil	DLGLAERCADIMRRAYPSAAIDITKSEATATSLTTIIAKAEGVRADVPPGAPVPHDLAVECRFDENVLTGFRWTAGPTH
Ga0210409_101850282	3300021559	Soil	MRRAYPSAAIDITKTEAAATSLTTIVATAEGVRTDVPPGAPPPQNLAVECRFDENILTGFRWTAGPTH
Ga0210409_109736842	3300021559	Soil	LAERCADIMRRAYPSAAIDITKSEATATSLTTIIAKAEGVRADVPPGAPVPHDLAVECRFDQNVLTA
Ga0126371_101653082	3300021560	Tropical Forest Soil	MMRRAYPSAEIDITKSEASAASLTTIVAKAEGVRTDLPPDTPSARDLAVECRFDQNILTEFRWTAGPTH
Ga0242661_11608141	3300022717	Soil	DIMRRAYPNAAIDITKSESSATSLTTIVAKAEGIRTDLPADSPLLHDLAVECLFDENILTGFRWTAGPTH
Ga0207692_107702181	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	AVPRDLGLAERCADIMRRAYPSAAIDITKSEATATSLTTIIAKAEAVRPDVPPGAPVPHDLAVECRFDENVLTGFRWTAGPTH
Ga0207685_100119331	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MRRAYPSAAIDITKTEASPTNLTTIIAKAEGLRTDLPADAPLPRDLAVECRFDENVLTGFSW
Ga0207684_100896822	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MRRAYPSAAIDIAKSEASAPGLTTIIAKVEGVRTDTPPDSPLPRDLAAECHFDENILTGFHWTAGPTR
Ga0207693_100279911	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MRRAYPSVAIDITKSEATATSLTTIVAKAEGIRTDLPPGAPVPPDLAVECRFDENILTGFRWTAGPTH
Ga0207663_100371852	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MMRRAYPSAAIDITKSEATATSLTTIIAKAEAVRPDVPPGAPVPHDLAVECRFDENVLTGFRWTAGPTH
Ga0207665_113883341	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	ERCADIMRRAYPSAAIGITKTEASPTNLTTIIAKAEGLRTDLPADAPLPRDLAVECRFDENVLTGFSWTAGPTH
Ga0209153_11395842	3300026312	Soil	YPSAAIDITKSEASATSLTTIVAKAEGVRTDVPPGAALPQDLAIECRFDENILTGFRWTAGPTH
Ga0209577_103724502	3300026552	Soil	AYPSAAIDITKSEASATSLTTIVAKAEGVRTDVPPGAALPQDLAIECRFDENILTGFRWTAGPTH
Ga0208859_10018822	3300027069	Forest Soil	MRRAYPSAAIDITKSEATATSLTTIIAKAEGVRADVPPGAPVPHDLAVECRFDQNVLTGFRWTAGPTH
Ga0208366_10292852	3300027073	Forest Soil	LAERCADIMRRAYPSAAIDITKSEATATSLTTIIAKAEGIRTDVPPGAPVPHDVAVECRFDENVLTGFRWTAG
Ga0209329_10007665	3300027605	Forest Soil	MRRAYPSAAIDITKSEATATSLTTIIAKAEAVRPDVPPGAPVPHDLAVECRFDENVLTGFRWTAGPTH
Ga0209528_10653121	3300027610	Forest Soil	LAERCADIMRRAYPSAAIDITKSEATATSLTTIIAKAEGVRADVPPGAPVPHDLAAECRFDQNVLTGFRWTAG
Ga0209447_100353621	3300027701	Bog Forest Soil	MRRAYPSAAIDITKSEASATSLTTIVAKAEGVRTDLPADSPLPHDLAVECRFDENVLTGFRWT
Ga0207862_12543241	3300027703	Tropical Forest Soil	MRRAYPSAAIEITKTEATATSLTTIMAQVDAVRTDLPDGSPLRRDLAVECQFDENILTGFRWTSGPLR
Ga0209328_100911092	3300027727	Forest Soil	LAERCADIMRRAYPSAAIDITKSEATATSLTTIIAKAEGVRADVPPGAPVPHDLAVECRFDENVLTG
Ga0209248_100088392	3300027729	Bog Forest Soil	MRRAYPSAAIDITKTEATVTSLTTIVATAEGVRTDAPPGAPAPQDLAVECRFDENILTGFRWTAGPTH
Ga0209248_102174831	3300027729	Bog Forest Soil	YPSAAIDITKSEASATSLTTIVAKAEGVRTDLPADSPLPHDLAVECRFDENVLTGFRWTAGPTH
Ga0209038_100102032	3300027737	Bog Forest Soil	MRRAYPSAAIDITKSEASATSLTTIVAKAEGVRTDLPADSPLPHDLAVECRFDENVLTGFRWTAGPTH
Ga0209074_103340771	3300027787	Agricultural Soil	SEASVTSLTTIVAKAEGIRTDLPPDTPLVRDLAVECTFDENVLTAFRWTAGPMH
Ga0209040_101521881	3300027824	Bog Forest Soil	DVGLAERCADTMRHAFPSAAIDITKTEASATSLTTIVAKAEGVRTDVPADVPLQRDLAVECRFDENVLTGFRWTSGPTH
Ga0209773_101638472	3300027829	Bog Forest Soil	IDITKTEATVTSLTTIVATAEGVRTDAPPGAPAPQDLAVECRFDENVLTGFRWTAGPTH
Ga0209590_101854691	3300027882	Vadose Zone Soil	RCADVMRRAYPSATIDITKSEAAAITLTTIVARVEGSRTDMPPDGPLPRDLAVECRFDDSVLTEFRWTAGPAR
Ga0209380_101885691	3300027889	Soil	LAERCADIMRRAYPSAAIDITKSEATATSLTTIIAKAEGVRADVPPGAPVPHDLAVECRFDDNVLTGFRWTAGPTH
Ga0209488_101091931	3300027903	Vadose Zone Soil	MRRAYPSAAIDITKSEATATSLTTIVAKAEGVRTDLPPGAPAPPGLAVECRFDENILTGFRWTAGPTH
Ga0209488_101974872	3300027903	Vadose Zone Soil	MRRAYPSATIEITKSEAAATTLTTITARVEGSRTDIPPDGPLPRNLAVECRFDENVLTGFRWTAGPTR
Ga0308309_105859921	3300028906	Soil	DITKSEATATSLTTIIAKAEGVRADVPPGAPVPHDLAVECRFDENVLTGFRWTAGPTH
Ga0170823_114947132	3300031128	Forest Soil	AAIEITKSEATAASLTTIIAKAEGVRTDLPPGAPVARDLAVECRFDESILTGFRWTAGPT
Ga0318541_100053405	3300031545	Soil	MRRAYPNAALDITKSEASATGLTTIIARVEGARTDTPPDSPLPRDLAVECRFDENVLTGFRWTAGPTS
Ga0318538_103922171	3300031546	Soil	GLAERCADIMQRAYPSAGIDITKSEASATSLTSIVAKVEGVRTDTPPDNPLPRDLAVECQFDENILTGFRWTAGPTH
Ga0318538_108269321	3300031546	Soil	MQRAYPSARIEITKSDAAATSLTTIIAHVEGARSDVPPDGPSARDLAAECRFDENIL
Ga0318528_102719422	3300031561	Soil	ITKSDAAATSLTTIIAHVEGSRSDVPPDGPSARDLAVECRFDENVLTGFHWTAGPTR
Ga0318542_101304053	3300031668	Soil	YPSAAIDITKTDATATSLTTIVANAEGVRTDVPPGAPVRQDLAVECRFDENILTGFRWTAGPTH
Ga0318561_105126211	3300031679	Soil	IGLAERCADIMQRAYPTTGIDITKSEASATSLTTIVAKVEGLGVDIPPDSPLPRDLAVECRFDENILTGFRWTAGPTH
Ga0318574_103436662	3300031680	Soil	AGIDITKSEASATSLTSIVAKVEGVTTDTPPDNPVPRDLAVECQFDENILTGFRWTAGPT
Ga0318572_105136051	3300031681	Soil	AGIDITKSEASATSLTSIVAKVEGVRTDTPPDNPLPRDLAVECQFDENILTGFRWTAGPT
Ga0318560_105554641	3300031682	Soil	SEASATSLTTIVAKAEGIRTDLPTDTPLARDLAVECRFDQNILTEFRWTAGPMR
Ga0306917_112151021	3300031719	Soil	MRRAYPNAAIDISKSESSATSLTTIVAKAEGVRTDLPADSPLLHDLAVECRFDENILTGFRWTAGPTH
Ga0318500_101981521	3300031724	Soil	GLAERCADIMQRAYPSAGIDITKSEASATSLTSIVAKVEGVTTDTPPDNPVPRDLAVECQFDENILTGFRWTAGPTH
Ga0307477_107037912	3300031753	Hardwood Forest Soil	RDIGVAERCADIMRRAYPNAAIDITKSESSATSLTTIVAKAEGVRTDLPADSPLLHDLAVECLFDENILTGFRWTAGPTH
Ga0318537_100498942	3300031763	Soil	MQRAYPSARIEITKSDAAATSLTTIIAHVEGARSDVPPDGPSARDLAVECRFDENVLTGFHWTAGPTR
Ga0318521_100115082	3300031770	Soil	MRRAYPNAALDITKSEASATGLTTIIARVEGARTDTPPDSPLPRDLAVECRFDENVLTGFRWTAGPMS
Ga0318521_100390821	3300031770	Soil	AERCAEIMRRAYPSATIDITKREASATGMTTIMATVEGVRTDLAPDQPLTQNLAVECRFDENVLTGFRWTAGPKLDRGR
Ga0318546_102151923	3300031771	Soil	FMTKAYPGAAIEITKSEAAAESLTTIVAKVEGVRTDLPPQAPLPRSVAVECRFDSGVLTGFRWTKGPA
Ga0318546_102265633	3300031771	Soil	IGLAERCADLMQRAYPSARIEITKSDAAATSLTTIIAHVEGSRSDVPPDGPSARDLAGECRFDENVLTGFHWTAGPTR
Ga0318547_101675752	3300031781	Soil	MQRAYPSARIEITKSDAAATSLTTIIAHVEGSRSDVPPDGPSARDLAVECRFDENVLTGFHWTAGPTR
Ga0318547_101875853	3300031781	Soil	YPSAEIDITKSEASATSLTTIVAKAEGIRTDLPTDTPLARDLAVECRFDQNILTEFRWTAGPMR
Ga0318548_105111852	3300031793	Soil	IDITRTDATATSLTTIVANAEGVRTDVPPGAPVRQDLAVECRFDENILTGFRWTAGPTH
Ga0318503_101175922	3300031794	Soil	MRRAYPSATIDITKREASATGMTTIMATVEGVRTDLAPDQPLTQNLAVECRFDENVLTGFRWTAGPKLDRGR
Ga0318512_104728201	3300031846	Soil	MMRRAYPSAEIDITKSEASATSLTTIVAKAEGIRTDLPTDTPLARDLAVECRFDQNILTEFRWTTGPMR
Ga0306925_1000385610	3300031890	Soil	MMRRAYPSAEIDITKSEASATSLTTIVAKAEGIRTDLPTDTPLARDLAVECRFDQNILTEFRWTAGPMR
Ga0306925_107408931	3300031890	Soil	PHDVGLTERCADIMRRAYPSAAIDITKTDATATSLTTIVANAEGVRTDVPPGAPVRQDLAVECRFDENILTGFRWTAGPTH
Ga0306925_118664982	3300031890	Soil	ERCANFMTKAYPGAAIEITKSEAAAESLTTIAAKVEGVRTDLPPEAPLPRSVAVECRFENGVLTGFRWTKGPA
Ga0318536_102151111	3300031893	Soil	CNVPHSIGLAERCADIMQRAYPSAGIDITKSEASATSLTSIVAKVEGVRTDTPPDNPLPRDLAVECQFDENILTRFRWTAGPTH
Ga0310916_108877811	3300031942	Soil	MQRAYPSARIEITKSDAAATSLTTIIAHVEGARSDVPPDGPSARDLAAECRFDENILTGFHWTAGPTR
Ga0310913_105427812	3300031945	Soil	SAAIEITKTEATATSLTTIMAQVDAVRTDLPDGSPLRRDLAVECQFDENILTGFRWTSGPLR
Ga0306926_105636533	3300031954	Soil	TKTDATTTSLTTIVANAEGVRTDVPPGAPVRQDLAVECRFDENILTGFRWTAGPTH
Ga0307479_121727402	3300031962	Hardwood Forest Soil	HDVGLADRCADIMRRAYPNAALDITKSEASATGLTTIIARVEGARTDTPPDSPLPRDLAVECRFDENVLTGFRWTAGPTS
Ga0306922_119803151	3300032001	Soil	SIPRDVGAAERCADVMRRAYPSATIEITKSEAAATSLTTIVAHVEGTRTDIAPEGPLPRDLAVECRFDESVLAEFHWTAGPTR
Ga0318533_101261771	3300032059	Soil	SCNVPHSIGLAERCADIMQRAYPSAGIDITKSEASATSLTSIVAKVEGVTTDTPPDNPVPRDLAVECQFDENILTGFRWTAGPTH
Ga0318553_101954931	3300032068	Soil	VGLAERCAEMMRRAYPSAEIDITKSEASATSLTTIVAKAEGIRTDLPTDTPLARDLAVECRFDQNILTEFRWTAGPMR
Ga0306920_1000250513	3300032261	Soil	MMRRAYPSAEIDITKSEASATSLTTIVAKAEGIRTDLPTDAPLAHDLAVECRFDQNILTEFRWTAGPMR
Ga0306920_1015925221	3300032261	Soil	LMQRAYPSARIEITKSDAAATSLTTIIAHVEGSRSDVPPDGPSARDLAVECRFDENVLTGFHWTAGPTR
Ga0310914_103783571	3300033289	Soil	ITKREASATSLTTIMATVEGVRTDLAPDQPLAQNLAVECRFDENILTGFRWTAGPKS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F056833

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences