Metagenome / Metatranscriptome Family F056848

Basic Information
Family ID	F056848
Family Type	Metagenome / Metatranscriptome
Number of Sequences	137
Average Sequence Length	44 residues
Representative Sequence	MPTIYIGSPAQIRDDLQARRDRFGLSYLVTSDRDLPTLSAVIAAL
Number of Associated Samples	117
Number of Associated Scaffolds	137

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	5.84 %
% of genes near scaffold ends (potentially truncated)	86.86 %
% of genes from short scaffolds (< 2000 bps)	86.86 %
Associated GOLD sequencing projects	108
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.58

Most Common Taxonomy
Group	Bacteria (81.022 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (40.146 % of family members)
Environment Ontology (ENVO)	Unclassified (46.715 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (40.876 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 38.36% β-sheet: 0.00% Coil/Unstructured: 61.64%
Feature Viewer

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Pfam ID	Name	% Frequency in 137 Family Scaffolds
PF01027	Bax1-I	7.30
PF00291	PALP	7.30
PF04264	YceI	5.84
PF13649	Methyltransf_25	5.11
PF01565	FAD_binding_4	2.92
PF00583	Acetyltransf_1	2.19
PF08240	ADH_N	2.19
PF00072	Response_reg	1.46
PF06325	PrmA	1.46
PF00248	Aldo_ket_red	1.46
PF00296	Bac_luciferase	1.46
PF12681	Glyoxalase_2	1.46
PF14525	AraC_binding_2	1.46
PF12847	Methyltransf_18	0.73
PF07602	DUF1565	0.73
PF02837	Glyco_hydro_2_N	0.73
PF00903	Glyoxalase	0.73
PF05721	PhyH	0.73
PF13602	ADH_zinc_N_2	0.73
PF01243	Putative_PNPOx	0.73
PF06445	GyrI-like	0.73
PF00528	BPD_transp_1	0.73
PF13738	Pyr_redox_3	0.73
PF04326	AlbA_2	0.73
PF12850	Metallophos_2	0.73
PF02687	FtsX	0.73
PF12697	Abhydrolase_6	0.73
PF00171	Aldedh	0.73
PF02913	FAD-oxidase_C	0.73
PF12833	HTH_18	0.73
PF01039	Carboxyl_trans	0.73
PF03061	4HBT	0.73

COG ID	Name	Functional Category	% Frequency in 137 Family Scaffolds
COG2353	Polyisoprenoid-binding periplasmic protein YceI	General function prediction only [R]	5.84
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	1.46
COG2264	Ribosomal protein L11 methylase PrmA	Translation, ribosomal structure and biogenesis [J]	1.46
COG2890	Methylase of polypeptide chain release factors	Translation, ribosomal structure and biogenesis [J]	1.46
COG3897	Protein N-terminal and lysine N-methylase, NNT1/EFM7 family	Posttranslational modification, protein turnover, chaperones [O]	1.46
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	0.73
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	0.73
COG0777	Acetyl-CoA carboxylase beta subunit	Lipid transport and metabolism [I]	0.73
COG0825	Acetyl-CoA carboxylase alpha subunit	Lipid transport and metabolism [I]	0.73
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	0.73
COG2865	Predicted transcriptional regulator, contains HTH domain	Transcription [K]	0.73
COG3250	Beta-galactosidase/beta-glucuronidase	Carbohydrate transport and metabolism [G]	0.73
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	0.73
COG4799	Acetyl-CoA carboxylase, carboxyltransferase component	Lipid transport and metabolism [I]	0.73
COG5285	Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) family	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.73

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	81.02 %
Unclassified	root	N/A	18.98 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	81.02 %
Unclassified	root	N/A	18.98 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	81.02 %
Unclassified	root	N/A	18.98 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	64.23 %
Unclassified	root	N/A	18.98 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	53.28 %
Unclassified	root	N/A	18.98 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	8.03 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	36.50 %
Unclassified	root	N/A	18.98 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	5.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.98 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	5.84 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	5.84 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	5.11 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	3.65 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	3.65 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.46 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	1.46 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.98 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	5.84 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	5.11 %
unclassified Pseudonocardiales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales	5.11 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.65 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	2.92 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1.46 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.46 %
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	0.73 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.73 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.98 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	5.84 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	5.11 %
Actinoplanes	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	5.11 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.65 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	2.92 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1.46 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.46 %
Arthrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter	0.73 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.73 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.98 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	5.84 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	5.11 %
Actinoplanes	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	5.11 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.65 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2.92 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.46 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	0.73 %
unclassified Arthrobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → unclassified Arthrobacter	0.73 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.73 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.98 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	5.84 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	5.11 %
Actinoplanes	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	5.11 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.65 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2.92 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.46 %
Arthrobacter sp. Br18	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → unclassified Arthrobacter → Arthrobacter sp. Br18	0.73 %
Streptomyces sp. AA4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. AA4	0.73 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.73 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.73 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004479\|Ga0062595_100626378	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	845	Open in IMG/M
3300005332\|Ga0066388_107368153	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	552	Open in IMG/M
3300005332\|Ga0066388_108061273	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. AA4	526	Open in IMG/M
3300005456\|Ga0070678_101021303	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	761	Open in IMG/M
3300005467\|Ga0070706_100079031	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3044	Open in IMG/M
3300005468\|Ga0070707_102246154	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300005529\|Ga0070741_10487086	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1117	Open in IMG/M
3300005614\|Ga0068856_101286886	All Organisms → cellular organisms → Bacteria	747	Open in IMG/M
3300005614\|Ga0068856_101355418	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	726	Open in IMG/M
3300005617\|Ga0068859_102316262	Not Available	592	Open in IMG/M
3300005713\|Ga0066905_100668835	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	887	Open in IMG/M
3300005764\|Ga0066903_102018450	All Organisms → cellular organisms → Bacteria	1108	Open in IMG/M
3300005764\|Ga0066903_104658340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	730	Open in IMG/M
3300006046\|Ga0066652_100329474	Not Available	1367	Open in IMG/M
3300006173\|Ga0070716_100095419	All Organisms → cellular organisms → Bacteria	1810	Open in IMG/M
3300006175\|Ga0070712_101871549	Not Available	525	Open in IMG/M
3300006237\|Ga0097621_102337700	Not Available	511	Open in IMG/M
3300006791\|Ga0066653_10180184	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1058	Open in IMG/M
3300006845\|Ga0075421_100582711	All Organisms → cellular organisms → Bacteria	1317	Open in IMG/M
3300006854\|Ga0075425_102615290	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	557	Open in IMG/M
3300006904\|Ga0075424_101030532	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	877	Open in IMG/M
3300009038\|Ga0099829_10783487	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	792	Open in IMG/M
3300009090\|Ga0099827_10237572	All Organisms → cellular organisms → Bacteria	1527	Open in IMG/M
3300009792\|Ga0126374_10739016	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	744	Open in IMG/M
3300010358\|Ga0126370_11037150	Not Available	751	Open in IMG/M
3300010358\|Ga0126370_11630673	Not Available	618	Open in IMG/M
3300010358\|Ga0126370_12370373	Not Available	526	Open in IMG/M
3300010359\|Ga0126376_12064421	Not Available	613	Open in IMG/M
3300010360\|Ga0126372_10028574	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3448	Open in IMG/M
3300010361\|Ga0126378_11993677	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	661	Open in IMG/M
3300010362\|Ga0126377_12040075	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	650	Open in IMG/M
3300010366\|Ga0126379_10130604	All Organisms → cellular organisms → Bacteria	2302	Open in IMG/M
3300010371\|Ga0134125_10528688	Not Available	1305	Open in IMG/M
3300010373\|Ga0134128_11475157	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300010376\|Ga0126381_100578482	All Organisms → cellular organisms → Bacteria	1595	Open in IMG/M
3300010376\|Ga0126381_101978830	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	840	Open in IMG/M
3300010396\|Ga0134126_12497008	Not Available	562	Open in IMG/M
3300010398\|Ga0126383_11040160	Not Available	908	Open in IMG/M
3300012200\|Ga0137382_10734988	All Organisms → cellular organisms → Bacteria	708	Open in IMG/M
3300012206\|Ga0137380_11069915	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	688	Open in IMG/M
3300012351\|Ga0137386_10370079	Not Available	1031	Open in IMG/M
3300012357\|Ga0137384_10139554	All Organisms → cellular organisms → Bacteria	2029	Open in IMG/M
3300012363\|Ga0137390_11047472	Not Available	766	Open in IMG/M
3300012917\|Ga0137395_10571625	All Organisms → cellular organisms → Bacteria	816	Open in IMG/M
3300012971\|Ga0126369_10921546	All Organisms → cellular organisms → Bacteria	960	Open in IMG/M
3300012988\|Ga0164306_10775830	Not Available	769	Open in IMG/M
3300013306\|Ga0163162_11102184	All Organisms → cellular organisms → Bacteria	899	Open in IMG/M
3300015264\|Ga0137403_10213624	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1855	Open in IMG/M
3300016294\|Ga0182041_10706588	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	894	Open in IMG/M
3300016319\|Ga0182033_10389244	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	1175	Open in IMG/M
3300016341\|Ga0182035_10913443	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	775	Open in IMG/M
3300016357\|Ga0182032_11953844	Not Available	514	Open in IMG/M
3300016404\|Ga0182037_10545870	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	978	Open in IMG/M
3300016404\|Ga0182037_10551965	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	972	Open in IMG/M
3300017924\|Ga0187820_1192547	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	633	Open in IMG/M
3300017926\|Ga0187807_1260246	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	570	Open in IMG/M
3300017932\|Ga0187814_10126696	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	948	Open in IMG/M
3300017974\|Ga0187777_10068464	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2298	Open in IMG/M
3300018058\|Ga0187766_10011332	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5114	Open in IMG/M
3300018060\|Ga0187765_10061528	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1959	Open in IMG/M
3300020199\|Ga0179592_10023706	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2744	Open in IMG/M
3300021404\|Ga0210389_11431203	Not Available	527	Open in IMG/M
3300021560\|Ga0126371_13382688	Not Available	539	Open in IMG/M
3300022467\|Ga0224712_10679227	Not Available	506	Open in IMG/M
3300025922\|Ga0207646_10639293	All Organisms → cellular organisms → Bacteria	954	Open in IMG/M
3300025925\|Ga0207650_11697324	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	535	Open in IMG/M
3300025939\|Ga0207665_10598489	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	861	Open in IMG/M
3300026078\|Ga0207702_11652021	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300026319\|Ga0209647_1046640	All Organisms → cellular organisms → Bacteria	2370	Open in IMG/M
3300026498\|Ga0257156_1122283	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300026557\|Ga0179587_10370567	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	931	Open in IMG/M
3300027516\|Ga0207761_1075842	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	653	Open in IMG/M
3300027646\|Ga0209466_1079967	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300027766\|Ga0209796_10148095	Not Available	735	Open in IMG/M
3300027882\|Ga0209590_10020735	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3312	Open in IMG/M
3300027909\|Ga0209382_10630738	All Organisms → cellular organisms → Bacteria	1163	Open in IMG/M
3300031544\|Ga0318534_10033706	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2808	Open in IMG/M
3300031544\|Ga0318534_10057135	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2193	Open in IMG/M
3300031544\|Ga0318534_10231956	All Organisms → cellular organisms → Bacteria	1065	Open in IMG/M
3300031564\|Ga0318573_10735799	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	530	Open in IMG/M
3300031573\|Ga0310915_11153437	Not Available	537	Open in IMG/M
3300031668\|Ga0318542_10173868	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	1078	Open in IMG/M
3300031668\|Ga0318542_10766357	Not Available	505	Open in IMG/M
3300031679\|Ga0318561_10194602	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1099	Open in IMG/M
3300031682\|Ga0318560_10394015	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	749	Open in IMG/M
3300031715\|Ga0307476_10366899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1061	Open in IMG/M
3300031723\|Ga0318493_10332760	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	823	Open in IMG/M
3300031723\|Ga0318493_10369211	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300031724\|Ga0318500_10119023	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1219	Open in IMG/M
3300031724\|Ga0318500_10199747	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	957	Open in IMG/M
3300031736\|Ga0318501_10104998	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1414	Open in IMG/M
3300031736\|Ga0318501_10519810	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	650	Open in IMG/M
3300031744\|Ga0306918_11242894	All Organisms → cellular organisms → Bacteria → Terrabacteria group	574	Open in IMG/M
3300031747\|Ga0318502_10102721	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1587	Open in IMG/M
3300031748\|Ga0318492_10022205	All Organisms → cellular organisms → Bacteria	2772	Open in IMG/M
3300031748\|Ga0318492_10377968	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	743	Open in IMG/M
3300031748\|Ga0318492_10588515	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	593	Open in IMG/M
3300031748\|Ga0318492_10722812	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	534	Open in IMG/M
3300031751\|Ga0318494_10073052	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	1851	Open in IMG/M
3300031763\|Ga0318537_10288531	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	607	Open in IMG/M
3300031769\|Ga0318526_10112006	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	1095	Open in IMG/M
3300031771\|Ga0318546_11254869	All Organisms → cellular organisms → Bacteria → Terrabacteria group	520	Open in IMG/M
3300031778\|Ga0318498_10021747	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2723	Open in IMG/M
3300031779\|Ga0318566_10247678	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	883	Open in IMG/M
3300031793\|Ga0318548_10044518	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2006	Open in IMG/M
3300031795\|Ga0318557_10165414	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1003	Open in IMG/M
3300031796\|Ga0318576_10165299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1035	Open in IMG/M
3300031799\|Ga0318565_10030080	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2453	Open in IMG/M
3300031805\|Ga0318497_10264208	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	956	Open in IMG/M
3300031819\|Ga0318568_10700890	Not Available	629	Open in IMG/M
3300031835\|Ga0318517_10334569	All Organisms → cellular organisms → Bacteria → Terrabacteria group	684	Open in IMG/M
3300031860\|Ga0318495_10030268	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2360	Open in IMG/M
3300031879\|Ga0306919_10379485	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1082	Open in IMG/M
3300031893\|Ga0318536_10446941	Not Available	651	Open in IMG/M
3300031897\|Ga0318520_10006184	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4874	Open in IMG/M
3300031897\|Ga0318520_10272724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1014	Open in IMG/M
3300031910\|Ga0306923_11339153	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	757	Open in IMG/M
3300031945\|Ga0310913_10826582	Not Available	653	Open in IMG/M
3300031954\|Ga0306926_10185483	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2581	Open in IMG/M
3300032008\|Ga0318562_10526667	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → unclassified Arthrobacter → Arthrobacter sp. Br18	684	Open in IMG/M
3300032025\|Ga0318507_10514348	Not Available	521	Open in IMG/M
3300032039\|Ga0318559_10244620	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	829	Open in IMG/M
3300032039\|Ga0318559_10358688	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	679	Open in IMG/M
3300032043\|Ga0318556_10056472	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	1911	Open in IMG/M
3300032052\|Ga0318506_10143314	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1043	Open in IMG/M
3300032054\|Ga0318570_10223786	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	852	Open in IMG/M
3300032054\|Ga0318570_10245095	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	812	Open in IMG/M
3300032055\|Ga0318575_10415263	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	683	Open in IMG/M
3300032060\|Ga0318505_10407033	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	643	Open in IMG/M
3300032068\|Ga0318553_10280267	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	871	Open in IMG/M
3300032089\|Ga0318525_10186180	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	1067	Open in IMG/M
3300032089\|Ga0318525_10261287	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	890	Open in IMG/M
3300032090\|Ga0318518_10405932	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	699	Open in IMG/M
3300032261\|Ga0306920_101150565	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1123	Open in IMG/M
3300032828\|Ga0335080_11040264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	832	Open in IMG/M
3300033158\|Ga0335077_10886136	Not Available	900	Open in IMG/M
3300033290\|Ga0318519_10518369	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	719	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.51%
Host-Associated	Host-Associated	9.49%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.32%
Plants	Host-Associated → Plants	9.49%
Aquatic	Environmental → Aquatic	2.19%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.32%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.38%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.65%
Freshwater	Environmental → Aquatic → Freshwater	2.19%
Roots	Host-Associated → Plants → Roots	0.73%
Phylloplane	Host-Associated → Plants → Phylloplane	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	75.18%
Loam	Environmental → Terrestrial → Soil → Loam	9.49%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.65%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.92%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.19%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.73%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.73%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.73%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	48.91%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.36%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.11%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.38%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.92%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.19%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.19%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.73%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.73%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	40.15%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.22%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.03%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.11%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.38%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.92%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.19%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.19%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.19%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.19%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.46%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.73%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.73%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.73%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.73%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.73%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.73%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.73%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	0.73%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026498	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-A	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027516	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 34 (SPAdes)	Environmental	Open in IMG/M
3300027646	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027766	Agave microbial communities from Guanajuato, Mexico - Or.Sf.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.58
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.58
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F056848

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062595_1006263781	3300004479	Soil	LFVGSVAQIREDLAARRDRFGLSYLVTADRDLPTLAEIAASG*
Ga0066388_1073681532	3300005332	Tropical Forest Soil	TVFIGSVAQIRDDLQARRDRFGLSYLITPERELPALAAVVAGP*
Ga0066388_1080612731	3300005332	Tropical Forest Soil	TVFIGSVAQIRDDLQARRDRFGLSYLITPERELPALAAVAAGP*
Ga0070678_1010213032	3300005456	Miscanthus Rhizosphere	PTILIGSAAQIRDDLEQRRARFGLSYLVTSDKDLPTLTRVIDAW*
Ga0070706_1000790315	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	IGSPAQIRDDLQARRDRFGLSYLVTSDRDLPTLSAVIAAL*
Ga0070707_1022461542	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	FIGSVAQIREDLQARRERFGLSYLITPDQELPTLAAIIAGS*
Ga0070741_104870862	3300005529	Surface Soil	MPTIFIGSVEQIREDLAARRELFGLSYLVTPDRDLPALAKITAG*
Ga0068856_1012868862	3300005614	Corn Rhizosphere	VAQIRADLQARRERFGLSYLVTPDRELPTLAAVMAGS*
Ga0068856_1013554181	3300005614	Corn Rhizosphere	WQMPTIFIGSVAQIREDLEARRERFGLSYLVTPDRDLPA*
Ga0068859_1023162622	3300005617	Switchgrass Rhizosphere	GSVAQIRADLQARRERFGLSYLVTPDRELPTLAAIMAGS*
Ga0066905_1006688352	3300005713	Tropical Forest Soil	GIDVEAVWQMPTIYIGSPAQIRDDLQARRDRFGLSYLVTSDRDLPALSKVIAGL*
Ga0066903_1020184501	3300005764	Tropical Forest Soil	GSVAQIRDDLQARRDRFGLSYLITPERELPALAAVVAGP*
Ga0066903_1046583403	3300005764	Tropical Forest Soil	MPTVFIGSVAQIRDDLQARRDRFGLSYLITPERELPALAAIVAGP*
Ga0066652_1003294743	3300006046	Soil	HVTIAAEDVWQMPTIFIGSVAQIREDLQAGASGGLSCLVTPDHDLPALTAIIAGS*
Ga0070716_1000954192	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	VAQIRADLQARRERFGLSYLVTLDRELPTLAAVMAGS*
Ga0070712_1018715492	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	IHQDLAARRDRFGLSYLVTADRELPALAEIAARG*
Ga0097621_1023377001	3300006237	Miscanthus Rhizosphere	VAQIRADLQARRERFGLSYLVTPDRELPTLAAIMAGS*
Ga0066653_101801843	3300006791	Soil	SGIDAEAVWGMPTVFIGSVTQIRADLQARRDRFGLSYLITPDRELPALAAVIAGQ*
Ga0075421_1005827113	3300006845	Populus Rhizosphere	AETVWQMPTVYIGSAAQIREDLRARRERFGLSYLVAPDRDLPVLAEVIAGL*
Ga0075425_1026152902	3300006854	Populus Rhizosphere	DAETVWQMPTVYIGSAAQIREDLRARRERFGLSYLVAPDRDLPVLAEVIAGL*
Ga0075424_1010305323	3300006904	Populus Rhizosphere	VWEMPTVFIGSVAQIHDDLQARRDRFGLSYLITPDRELPVLSAVIAGT*
Ga0099829_107834871	3300009038	Vadose Zone Soil	VDAVWQMPAIYIGSPAQIRDDLQARCERFGLSYLVTSDRDLPTLTEVIAGV*
Ga0099827_102375723	3300009090	Vadose Zone Soil	MPTVFIGSAAQIRDDLRARRDRFGLSYLISSDRDLPALAEIIAGL*
Ga0126374_107390161	3300009792	Tropical Forest Soil	IRDDLQARRDRFGLSYLVTSDRDLPALSKIIAGL*
Ga0126370_110371502	3300010358	Tropical Forest Soil	ETVWDMPTVFIGSVAQIRDDLQARRDRFGLSYLITPERELPALAAVAAGP*
Ga0126370_116306732	3300010358	Tropical Forest Soil	SVAQIRDDLQARRDRFGLSYLITPDRELPTLAAVVAGP*
Ga0126370_123703732	3300010358	Tropical Forest Soil	VGSPEQIRADLRERRERFGLSYLITPDHQLPVLAQVIGGL*
Ga0126376_120644212	3300010359	Tropical Forest Soil	ETAWQMPTLFVGSPEQIRADLRERRERFGLSYLITPDHQLPVLAQVIGGL*
Ga0126372_100285745	3300010360	Tropical Forest Soil	MPAILIGSAAQIRENLQARRERFGLSNLVTSDRALPALTEIIASF*
Ga0126378_119936772	3300010361	Tropical Forest Soil	EMPTVFIGSVAQIRDDLQARRDRFGLSYLITPDRELPALAAVIAGT*
Ga0126377_120400752	3300010362	Tropical Forest Soil	FIGSVAQIREDLQARRERFGLSYLVTPDRELPTLAAIIAGS*
Ga0126379_101306044	3300010366	Tropical Forest Soil	AQIRDDLQARRERFGLSYLVTSDHDLPALSTVIAAL*
Ga0134125_105286882	3300010371	Terrestrial Soil	VAQIRADLQARRERFGLTYLVTPDRELPTLAAIMAGS*
Ga0134128_114751571	3300010373	Terrestrial Soil	IGSAAQIREDLRARRERFGLSYLVAPDRDLPVLAEVIAGL*
Ga0126381_1005784823	3300010376	Tropical Forest Soil	FIGSVAQIRDDLQARRDRFGLSYLITPERELPALAAVVAGP*
Ga0126381_1019788301	3300010376	Tropical Forest Soil	GSAAQIREDLQARRDRFGLSYLITPDRELPALAAVIAGT*
Ga0134126_124970081	3300010396	Terrestrial Soil	GIDAEAVWQMPTIFVGSVAQIHQDLAARRDRFGLSYLVTADRELPALAEIAARG*
Ga0126383_110401601	3300010398	Tropical Forest Soil	IFIGSVAQIREDLQARRERFGLSYLVTPDRELPTLAAVIAGS*
Ga0137382_107349882	3300012200	Vadose Zone Soil	SAAQIREDLQARRERFGLSYLVAPDRDLLMLAEVIAGL*
Ga0137380_110699152	3300012206	Vadose Zone Soil	VWEMPTILIGSAAQIRADLHARRERFGLSYLVTTDRALPALTEIIAGLPDRIP*
Ga0137386_103700791	3300012351	Vadose Zone Soil	ETVWQMPTLFIGSVAQIWEDLRSRRGRFGLSYLITSDSELPTLTQVIDGL*
Ga0137384_101395544	3300012357	Vadose Zone Soil	DVNAVWEMPTVLIGSVTQIRADLQARQERFGLSYLVTSDRALPTLTEIIASL*
Ga0137390_110474722	3300012363	Vadose Zone Soil	WQMPTLFIGSVAQIREDLRARRDRFGLSYLITSDSELPTLTQVIDGL*
Ga0137395_105716253	3300012917	Vadose Zone Soil	WSGIDVEAVWEMPTVFIGSEAQIRDDLRARRDRFGLSYLITPDRELPVLAAVIAGG*
Ga0126369_109215464	3300012971	Tropical Forest Soil	DAVWRMPTIYIGSPAQVRDDLQARRDRFGLSYLITSDRDLTTLNAVIAAL*
Ga0164306_107758302	3300012988	Soil	AQIRADLQARRERFGLSYLVTPDRELPTLAAIMAGS*
Ga0163162_111021842	3300013306	Switchgrass Rhizosphere	WQMPTVYIGSAAQIREDLRARRERFGLSYLVAPDRDLPVLAEVIAGL*
Ga0137403_102136242	3300015264	Vadose Zone Soil	MPTILIGSAAQIREDLQARRERFGLSYLITTDRALPALTEIIASL*
Ga0182041_107065881	3300016294	Soil	YIGSPAQIRADLQARRDRFGLSYLVTSDRDLPTLGTVIAAL
Ga0182033_103892441	3300016319	Soil	MPTIYIGSPAQIRADLQARRDRFGLSYLVTSDRDLPTLSTVIAAL
Ga0182035_109134431	3300016341	Soil	DVETVWQMPTIYIGSPAQIRADLQARRDRFGLSYLVTSDRDLPTLSAVIAAL
Ga0182032_119538441	3300016357	Soil	TVWQMPTIYIGSPAQIRADLQARRDRFGLSYLVTSDRDLPTLSAVIAAL
Ga0182037_105458703	3300016404	Soil	GSPAQVREDLQARRDRFGVSYLITSDRDLSTLNAVTAAR
Ga0182037_105519652	3300016404	Soil	WQMPTIYIGSPAQIRDDLQARRDRFGLSYLVTSDRDLPTLSTVIAAL
Ga0187820_11925472	3300017924	Freshwater Sediment	VWDMPTIYIGSIAQIRDDLRARRERFGLAYLITPDREQSALARVIAGL
Ga0187807_12602462	3300017926	Freshwater Sediment	MPTIYIGSIAQIRDDLRARREGFGLAYLITPDREQSALARVIAGL
Ga0187814_101266962	3300017932	Freshwater Sediment	MPTIYIGSIAQIRDDLRARRERFGLAYLITPDREQSALARVIAGL
Ga0187777_100684645	3300017974	Tropical Peatland	VLIGSAGQIREDLQARRDRFGLSYLVTSDRTLPALTKIIAAF
Ga0187766_100113321	3300018058	Tropical Peatland	SIAQIRDDLRARRERFGLAYLITPDHEQSALARVIAGL
Ga0187765_100615283	3300018060	Tropical Peatland	VAQIREDLQARRERFGLSYLVTPDHDLPTLAAVIAGS
Ga0179592_100237061	3300020199	Vadose Zone Soil	QIREDLQARRERFGLSYLVTSDRALPALAEIIAGL
Ga0210389_114312031	3300021404	Soil	TIFIGSVGQIQADLQARRERFGLSYLVTPDRDLPALTKIIASL
Ga0126371_133826881	3300021560	Tropical Forest Soil	IYIGSPAQIRADLQARRDRFGLSYLVTSDRDLPTLSTVIAAM
Ga0224712_106792272	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	VFIGSVAQIRADLQARRERFGLSYLVTLDRELPTLAAVMAGS
Ga0207646_106392933	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	FIGSVAQIREDLQARRERFGLSYLITPDQELPTLAAIIAGS
Ga0207650_116973242	3300025925	Switchgrass Rhizosphere	IGSAAQIRDDLEQRRERFGLSYLVTSDKDLPTLTRVIAAW
Ga0207665_105984892	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	VAQIRADLQARRERFGLSYLVTLDRELPTLAAVMAGS
Ga0207702_116520211	3300026078	Corn Rhizosphere	PTVYIGSAAQIREDLRARRERFGLSYLVAPDRDLPVLAEVIAGL
Ga0209647_10466403	3300026319	Grasslands Soil	GSVAQIREDLEARRERFGLSYLVTSDRALPALTEIIASL
Ga0257156_11222832	3300026498	Soil	MPTIYIGSPAQIRDDLQARRDRFGLSYLVTSDRDLPTLSAVIAAL
Ga0179587_103705671	3300026557	Vadose Zone Soil	TIFIGSVEQIRADLQARRERFGLSYLVTPDRDRPALAKIIASL
Ga0207761_10758422	3300027516	Tropical Forest Soil	IEVEAVWDMPTIYIGSIAQIRDDLRARRERFGLAYLVTPDREQSALARVIAGL
Ga0209466_10799671	3300027646	Tropical Forest Soil	MPTIYIGSVSQIREDLEARRERFGLSYLVTPDRDLPTLAEVITGL
Ga0209796_101480952	3300027766	Agave	VGSAGQIRDDLRERRARFGLSYLVTSDADLPVLEIVIAGL
Ga0209590_100207352	3300027882	Vadose Zone Soil	VETVWDMPTVFIGSAAQIRDDLRARRDRFGLSYLISSDRDLPALAEIIAGL
Ga0209382_106307381	3300027909	Populus Rhizosphere	DAETVWQMPTVYIGSAAQIREDLRARRERFGLSYLVAPDRDLPVLAEVIAGL
Ga0318534_100337062	3300031544	Soil	TVWEMPSVFIGSVAQIRDDLQARRDRFGLSYLITPDRELPVLAAIVAGP
Ga0318534_100571351	3300031544	Soil	MPTIYIGSMAQIRDDLRARRERFGLSYLVTPDRELPTLAQVIAGL
Ga0318534_102319563	3300031544	Soil	VWDMPTVFIGSVAQIRDDLQARRDRFGLSYLITPDRELPALAAVIAGT
Ga0318573_107357991	3300031564	Soil	TVWQMPTIYIGSPAQIRDDLQARRDRFGLSYLVTSDRDLPTLSTVIAAL
Ga0310915_111534371	3300031573	Soil	DVEAVWQMPTIYIGSPAQIRDDLQARRDRFGLSYLITSDRDLTTLNAVIAAL
Ga0318542_101738681	3300031668	Soil	EALWQMPTIYIGSPAQIHEDLQARRERFGLSYLITSDRDLPTLGAVIAAR
Ga0318542_107663571	3300031668	Soil	IDVETVWQMPTIYIGSPAQIRADLQARRDRFGLSYLVTSDRDLPTLSTVIAAL
Ga0318561_101946021	3300031679	Soil	HIGSAAQIRDDLRARAERFGLTYLVTSDRDLPTLAEIAAGM
Ga0318560_103940152	3300031682	Soil	WEMPTIFIGSPAQIRDDLQARRDRFGLSYLVTSDRDLPTLSAVIAGL
Ga0307476_103668991	3300031715	Hardwood Forest Soil	AGTEVSTVWEMPTLFIGSVAQIREDLRARQERFGLSYLIATGRDLPGLTEIVGGL
Ga0318493_103327601	3300031723	Soil	QIHEDLQARRERFGLSYLITSDRDLPTLGAVIAAR
Ga0318493_103692113	3300031723	Soil	IGSVAQIRDDLQARRDRFGLSYLITPDSELPTLTAVIAGQ
Ga0318500_101190231	3300031724	Soil	PTIYIGSMAQIRDDLRARRERFGLSYLVTPDRELPTLAQVIAGL
Ga0318500_101997472	3300031724	Soil	IGSPAQIRADLQARRDRFGLSYLVTSDRDLPTLSAVIAAL
Ga0318501_101049983	3300031736	Soil	AQIRDDLRARRERFGLSYLVTPDRELPTLAQVIAGL
Ga0318501_105198101	3300031736	Soil	DVETVWQMPTIYIGSPAQIRDDLQARRDRFGLSYLVTSDRDLPTLSTVIAAL
Ga0306918_112428942	3300031744	Soil	QMPTIHIGSAAQIRDDLRARAERFGLTYLVTSDRDLPTLAEIAAGM
Ga0318502_101027211	3300031747	Soil	RGHAGPLQRLPAPIYIGSMAQIRDDLRARRERFGLSYLVTPDRELPTLAQVIAGL
Ga0318492_100222051	3300031748	Soil	IDVETVWQMPTIYIGSPAQIRADLQARRDRFGLSYLVTSDRDLPTLSAVIAAL
Ga0318492_103779683	3300031748	Soil	VWDMPTIYIGSMAQIRDDLRARRERFGLSYLVTPDRELPTLAQVIAGL
Ga0318492_105885151	3300031748	Soil	VWDMPTVFIGSPGQIRDDLQARRERFGLSYLITPDRELPVLAAVIAAL
Ga0318492_107228121	3300031748	Soil	QMPTIYIGSPAQIRDDLRARRDRFGLSYLVTSDRDLPTLGTVIAAL
Ga0318494_100730523	3300031751	Soil	PAQIRDDLQARRDRFGLSYLVTSDRDLPTLSAVIAGL
Ga0318537_102885311	3300031763	Soil	GWEGIEVEAVWQMPTIYIGSPAQIHEDLQARRERFGLSYLITSDRDLPTLGAVIAAR
Ga0318526_101120063	3300031769	Soil	VEAVWQMPTIYIGSPAQIHEDLQARRERFGLSYLITSDRDLPTLGAVIAAR
Ga0318546_112548692	3300031771	Soil	QIRDDLRARAERFGLTYLVTSDRDLPTLAEIAAGM
Ga0318498_100217472	3300031778	Soil	MAQIRDDLRARRERFGLSYLVTPDRELPTLAQVIAGL
Ga0318566_102476782	3300031779	Soil	YICSPAQIRDDLQARRDRFGLSYLVTSDRDLPTLSTVIAAL
Ga0318548_100445182	3300031793	Soil	SGIDAETVWEMPTVFIGSVAQIRDDLQARRDRFGLSYLITPDRELPVLAAIVAGP
Ga0318557_101654141	3300031795	Soil	QMPTIYIGSPAQIHEDLQARRERFGLSYLITSDRDLPTLGAVIAAR
Ga0318576_101652992	3300031796	Soil	QMPTIYIGSPAQIRADLQARRDRFGLSYLVTSDRDLPTLSTVIAAL
Ga0318565_100300801	3300031799	Soil	EMPSVFIGSVAQIRDDLQARRDRFGLSYLITPDRELPVLAAIVAGP
Ga0318497_102642082	3300031805	Soil	AETVWEMPTVFIGSVAQIRDDLQARRDRFGLSYLITPDSELPTLAAVIAGQ
Ga0318568_107008901	3300031819	Soil	VWQMPTIYIGSPAQIRDDLQARRDRFGLSYLVTSDRDLPTLSTVIAAL
Ga0318517_103345691	3300031835	Soil	GTVWQMPTIHIGSAAQIRDDLRARAERFGLTYLVTSDRDLPTLAEIAAGM
Ga0318495_100302684	3300031860	Soil	PAQIRADLQARRDRFGLSYLVTSDRDLPTLSAVIAAL
Ga0306919_103794853	3300031879	Soil	PTIYIGSPAQVRDDLQARRDRFGLSYLITSDRDLTTLNAVIAAL
Ga0318536_104469411	3300031893	Soil	MPTIYIGSPAQIRADLQARRDRFGLSYLVTSDRDLPTLSAVIAAL
Ga0318520_100061844	3300031897	Soil	SVFIGSVAQIRDDLQARRDRFGLSYLITPDRELPVLAAIVAGP
Ga0318520_102727243	3300031897	Soil	DMPTIYIGSMAQIRDDLRARRERFGLSYLVTPDRELPTLAQVIAGL
Ga0306923_113391531	3300031910	Soil	VEAVWQMPTIFIGSPAQIRDDLQARRDRFGLSYLVTSDRDLPTLSAVIAGL
Ga0310913_108265821	3300031945	Soil	SGIDAETVWEMPSVFIGSVAQIRDDLQARRDRFGLSYLITPDRELPVLAAIVVGP
Ga0306926_101854835	3300031954	Soil	MAQIRDDLRARRERFGLSYLVTPGRELPTLAQVIAGL
Ga0318562_105266672	3300032008	Soil	PTVFIGSPGQIRDDLQARRERFGLSYLITPDRELPVLAAVIAAL
Ga0318507_105143482	3300032025	Soil	PAQIRADLQARRDRFGLSYLVTSDRDLPTLGTVIAAL
Ga0318559_102446202	3300032039	Soil	IGSPAQIRDDLQARRDRFGLSYLVTSDRDLPTLSTVIAAL
Ga0318559_103586881	3300032039	Soil	AQIRADLQARYDRFGLSYLVTSDRDLPTLSAVIAAL
Ga0318556_100564723	3300032043	Soil	QMPTIYIGSPAQIRADLQARRDRFGLSYLVTSDRDLPTLSAVIAAL
Ga0318506_101433141	3300032052	Soil	GSPAQIRADLQARRDRFGLSYLVTSDRDLPTLSAVIAAL
Ga0318570_102237861	3300032054	Soil	AQIRDDLQARRDRFGLSYLVTSDRDLPTLSAVIAGL
Ga0318570_102450951	3300032054	Soil	EGIGVEAVWQMPTIYIGSPAQIHEDLQARRERFGLSYLITSDRDLPTLGAVIAAR
Ga0318575_104152631	3300032055	Soil	IYIGSPAQIRDDLRARRERFGLSYLVTSDRDLPTLSTVIAAL
Ga0318505_104070333	3300032060	Soil	LQRLPAPIYIGSMAQIRDDLRARRERFGLSYLVTPGRELPTLAQVIAGL
Ga0318553_102802672	3300032068	Soil	VWQMPTIYIGSPAQIRADLQARRDRFGLSYLVTSDRDLPTLSAVIAAL
Ga0318525_101861803	3300032089	Soil	IGSPAQIRDDLQARRDRFGLSYLVTSDRDLPTLSAVIAGL
Ga0318525_102612871	3300032089	Soil	IYIGSPAQIRDDLQARRDRFGLSYLVTSDRDLPTLSTVIAAL
Ga0318518_104059323	3300032090	Soil	YIGSMAQIRDDLRARRERFGLSYLVTPDRELPTLAQVIAGL
Ga0306920_1011505652	3300032261	Soil	MPTIYIGSPAQIRDDLQARRDRFGLSYLITSDRDLSTLNAVTAAR
Ga0335080_110402642	3300032828	Soil	GAVWQMPTIFVGSVAQIHEDLAARRDRFGLSYLVTADRELPALAEIAARG
Ga0335077_108861361	3300033158	Soil	DVWQMPAIFIGSAAQIREDLQARRERFGLSYLVTPDRELPTLAAIIAGS
Ga0318519_105183693	3300033290	Soil	IGSMAQIRDDLRARRERFGLSYLVTPDRELPTLAQVIAGL

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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