NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F056937

Metagenome / Metatranscriptome Family F056937

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F056937
Family Type Metagenome / Metatranscriptome
Number of Sequences 137
Average Sequence Length 47 residues
Representative Sequence MQTQAPKGQYRVIGLDPVDTLTWPSGPLWKDCETFDEARDLADRN
Number of Associated Samples 107
Number of Associated Scaffolds 137

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 98.54 %
% of genes near scaffold ends (potentially truncated) 93.43 %
% of genes from short scaffolds (< 2000 bps) 94.89 %
Associated GOLD sequencing projects 103
AlphaFold2 3D model prediction Yes
3D model pTM-score0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (98.540 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(43.796 % of family members)
Environment Ontology (ENVO) Unclassified
(45.255 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(45.985 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 13.70%    β-sheet: 13.70%    Coil/Unstructured: 72.60%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.40
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 137 Family Scaffolds
PF02687FtsX 2.19
PF03572Peptidase_S41 2.19
PF04956TrbC 2.19
PF11799IMS_C 1.46
PF01381HTH_3 0.73
PF16793RepB_primase 0.73
PF01068DNA_ligase_A_M 0.73
PF03135CagE_TrbE_VirB 0.73
PF01694Rhomboid 0.73
PF13751DDE_Tnp_1_6 0.73
PF13482RNase_H_2 0.73
PF00126HTH_1 0.73
PF03466LysR_substrate 0.73
PF13683rve_3 0.73
PF08423Rad51 0.73
PF12705PDDEXK_1 0.73
PF12704MacB_PCD 0.73

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 137 Family Scaffolds
COG0793C-terminal processing protease CtpA/Prc, contains a PDZ domainPosttranslational modification, protein turnover, chaperones [O] 2.19
COG3838Type IV secretory pathway, VirB2 component (pilin)Intracellular trafficking, secretion, and vesicular transport [U] 2.19
COG0468RecA/RadA recombinaseReplication, recombination and repair [L] 0.73
COG0705Membrane-associated serine protease, rhomboid familyPosttranslational modification, protein turnover, chaperones [O] 0.73
COG1423ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) familyReplication, recombination and repair [L] 0.73
COG1793ATP-dependent DNA ligaseReplication, recombination and repair [L] 0.73
COG3451Type IV secretory pathway, VirB4 componentIntracellular trafficking, secretion, and vesicular transport [U] 0.73


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms98.54 %
UnclassifiedrootN/A1.46 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001137|JGI12637J13337_1003504All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1302Open in IMG/M
3300002907|JGI25613J43889_10052100All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1144Open in IMG/M
3300005167|Ga0066672_10266024All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1107Open in IMG/M
3300005175|Ga0066673_10894159All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium505Open in IMG/M
3300005177|Ga0066690_10304918All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1076Open in IMG/M
3300005177|Ga0066690_11054397All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium507Open in IMG/M
3300005179|Ga0066684_10429927All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium887Open in IMG/M
3300005181|Ga0066678_10854799All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium598Open in IMG/M
3300005187|Ga0066675_10075386All Organisms → cellular organisms → Bacteria2159Open in IMG/M
3300005434|Ga0070709_10964563All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → unclassified Ktedonobacteraceae → Ktedonobacteraceae bacterium677Open in IMG/M
3300005450|Ga0066682_10589328All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium699Open in IMG/M
3300005537|Ga0070730_10017839All Organisms → cellular organisms → Bacteria5586Open in IMG/M
3300005537|Ga0070730_10042475All Organisms → cellular organisms → Bacteria3340Open in IMG/M
3300005540|Ga0066697_10775924All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium521Open in IMG/M
3300005559|Ga0066700_11106933All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium518Open in IMG/M
3300005561|Ga0066699_11070539All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium556Open in IMG/M
3300005574|Ga0066694_10500591All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium567Open in IMG/M
3300005586|Ga0066691_10795217All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium558Open in IMG/M
3300006046|Ga0066652_101299803All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium686Open in IMG/M
3300006052|Ga0075029_100818631All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → unclassified Ktedonobacteraceae → Ktedonobacteraceae bacterium635Open in IMG/M
3300006163|Ga0070715_10269449All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium898Open in IMG/M
3300006796|Ga0066665_10198308All Organisms → cellular organisms → Bacteria1556Open in IMG/M
3300006796|Ga0066665_10409480All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1119Open in IMG/M
3300006796|Ga0066665_10500144All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium996Open in IMG/M
3300006797|Ga0066659_10204943All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1446Open in IMG/M
3300006800|Ga0066660_11088946All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium634Open in IMG/M
3300006893|Ga0073928_10005215All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae18406Open in IMG/M
3300007265|Ga0099794_10435174All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium687Open in IMG/M
3300009012|Ga0066710_103919689All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium557Open in IMG/M
3300009012|Ga0066710_104182489All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium539Open in IMG/M
3300009038|Ga0099829_11268618All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium609Open in IMG/M
3300009088|Ga0099830_11358053All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → unclassified Ktedonobacteraceae → Ktedonobacteraceae bacterium591Open in IMG/M
3300009090|Ga0099827_10723411All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → unclassified Ktedonobacteraceae → Ktedonobacteraceae bacterium860Open in IMG/M
3300009143|Ga0099792_10204462All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1125Open in IMG/M
3300009629|Ga0116119_1106635All Organisms → cellular organisms → Bacteria → Acidobacteria703Open in IMG/M
3300009645|Ga0116106_1103831All Organisms → cellular organisms → Bacteria → Acidobacteria918Open in IMG/M
3300010304|Ga0134088_10456121All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium627Open in IMG/M
3300010337|Ga0134062_10103925All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1222Open in IMG/M
3300010341|Ga0074045_10125842All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1756Open in IMG/M
3300010358|Ga0126370_11992490All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium567Open in IMG/M
3300010361|Ga0126378_11612718All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium737Open in IMG/M
3300010376|Ga0126381_102869498All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium687Open in IMG/M
3300010937|Ga0137776_1736574All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium596Open in IMG/M
3300011270|Ga0137391_10241437All Organisms → cellular organisms → Bacteria1567Open in IMG/M
3300012189|Ga0137388_11421569All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium632Open in IMG/M
3300012198|Ga0137364_11018499All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium625Open in IMG/M
3300012200|Ga0137382_11244598All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium527Open in IMG/M
3300012200|Ga0137382_11280762All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium518Open in IMG/M
3300012201|Ga0137365_10751289All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium712Open in IMG/M
3300012203|Ga0137399_11294967All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium613Open in IMG/M
3300012203|Ga0137399_11653278All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium529Open in IMG/M
3300012205|Ga0137362_11030341All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium700Open in IMG/M
3300012205|Ga0137362_11264788All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium623Open in IMG/M
3300012206|Ga0137380_10728294All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium860Open in IMG/M
3300012206|Ga0137380_10848516All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. dw_53787Open in IMG/M
3300012208|Ga0137376_10412810All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1172Open in IMG/M
3300012208|Ga0137376_10522242All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1030Open in IMG/M
3300012208|Ga0137376_10599715All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → unclassified Ktedonobacteraceae → Ktedonobacteraceae bacterium953Open in IMG/M
3300012208|Ga0137376_11095152All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium681Open in IMG/M
3300012209|Ga0137379_10557051All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1054Open in IMG/M
3300012210|Ga0137378_10470414Not Available1163Open in IMG/M
3300012210|Ga0137378_11749521All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium527Open in IMG/M
3300012285|Ga0137370_10014867All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium3803Open in IMG/M
3300012285|Ga0137370_10711419All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium624Open in IMG/M
3300012351|Ga0137386_10176517All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1532Open in IMG/M
3300012357|Ga0137384_10239230All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1516Open in IMG/M
3300012359|Ga0137385_10400331All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1171Open in IMG/M
3300012361|Ga0137360_10630392All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium919Open in IMG/M
3300012361|Ga0137360_10776320All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium824Open in IMG/M
3300012361|Ga0137360_10838423All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → unclassified Ktedonobacteraceae → Ktedonobacteraceae bacterium792Open in IMG/M
3300012361|Ga0137360_11650046All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium546Open in IMG/M
3300012362|Ga0137361_10386457All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1285Open in IMG/M
3300012362|Ga0137361_11157130All Organisms → cellular organisms → Bacteria695Open in IMG/M
3300012683|Ga0137398_10304409All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1072Open in IMG/M
3300012917|Ga0137395_10470291All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium904Open in IMG/M
3300012918|Ga0137396_10193619All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1493Open in IMG/M
3300012918|Ga0137396_10896408All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium650Open in IMG/M
3300012922|Ga0137394_10331983All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1298Open in IMG/M
3300012922|Ga0137394_11059531All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium672Open in IMG/M
3300012922|Ga0137394_11183492All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → unclassified Ktedonobacteraceae → Ktedonobacteraceae bacterium628Open in IMG/M
3300012923|Ga0137359_10235735All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1633Open in IMG/M
3300012923|Ga0137359_10421390All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1182Open in IMG/M
3300012923|Ga0137359_11759602All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → unclassified Ktedonobacteraceae → Ktedonobacteraceae bacterium507Open in IMG/M
3300012923|Ga0137359_11774460All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → unclassified Ktedonobacteraceae → Ktedonobacteraceae bacterium504Open in IMG/M
3300012924|Ga0137413_11140220All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium619Open in IMG/M
3300012925|Ga0137419_10443339All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1022Open in IMG/M
3300012925|Ga0137419_11099134All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium662Open in IMG/M
3300012927|Ga0137416_10760044All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium855Open in IMG/M
3300012927|Ga0137416_11299447All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → unclassified Ktedonobacteraceae → Ktedonobacteraceae bacterium657Open in IMG/M
3300012927|Ga0137416_11514969All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium609Open in IMG/M
3300012930|Ga0137407_12383747All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium506Open in IMG/M
3300012975|Ga0134110_10272097All Organisms → cellular organisms → Bacteria726Open in IMG/M
3300012976|Ga0134076_10277015All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium721Open in IMG/M
3300014150|Ga0134081_10428804All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium501Open in IMG/M
3300014152|Ga0181533_1298270All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium586Open in IMG/M
3300014155|Ga0181524_10010644All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium7426Open in IMG/M
3300015054|Ga0137420_1151898All Organisms → cellular organisms → Bacteria → Acidobacteria749Open in IMG/M
3300015241|Ga0137418_10087492All Organisms → cellular organisms → Bacteria → Proteobacteria2817Open in IMG/M
3300015241|Ga0137418_10631954All Organisms → cellular organisms → Bacteria835Open in IMG/M
3300015245|Ga0137409_10776475All Organisms → cellular organisms → Bacteria → Acidobacteria793Open in IMG/M
3300016270|Ga0182036_11851324All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium511Open in IMG/M
3300018007|Ga0187805_10396762All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium640Open in IMG/M
3300018047|Ga0187859_10854923All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium524Open in IMG/M
3300018482|Ga0066669_11553057All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium603Open in IMG/M
3300020579|Ga0210407_10562869All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → unclassified Ktedonobacteraceae → Ktedonobacteraceae bacterium889Open in IMG/M
3300020580|Ga0210403_11008571All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium651Open in IMG/M
3300021088|Ga0210404_10429080All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → unclassified Ktedonobacteraceae → Ktedonobacteraceae bacterium741Open in IMG/M
3300021170|Ga0210400_10304251All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1309Open in IMG/M
3300021171|Ga0210405_10617959All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium843Open in IMG/M
3300021171|Ga0210405_10676680All Organisms → cellular organisms → Bacteria799Open in IMG/M
3300021432|Ga0210384_10486153All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1111Open in IMG/M
3300021478|Ga0210402_11779789All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium542Open in IMG/M
3300021479|Ga0210410_11458117All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium577Open in IMG/M
3300025439|Ga0208323_1066052All Organisms → cellular organisms → Bacteria → Acidobacteria624Open in IMG/M
3300025910|Ga0207684_10479393All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1067Open in IMG/M
3300026551|Ga0209648_10458930All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → unclassified Ktedonobacteraceae → Ktedonobacteraceae bacterium783Open in IMG/M
3300026555|Ga0179593_1024871All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum1833Open in IMG/M
3300027583|Ga0209527_1046356All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium979Open in IMG/M
3300027737|Ga0209038_10189220All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → unclassified Ktedonobacteraceae → Ktedonobacteraceae bacterium623Open in IMG/M
3300027903|Ga0209488_10972305All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium590Open in IMG/M
3300028536|Ga0137415_10488469All Organisms → cellular organisms → Bacteria1039Open in IMG/M
3300029636|Ga0222749_10171537All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1069Open in IMG/M
3300030813|Ga0265750_1052650All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium620Open in IMG/M
3300031057|Ga0170834_111763652All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → unclassified Ktedonobacteraceae → Ktedonobacteraceae bacterium599Open in IMG/M
3300031682|Ga0318560_10699580All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium548Open in IMG/M
3300031823|Ga0307478_10922015All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium731Open in IMG/M
3300031879|Ga0306919_10473846All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium964Open in IMG/M
3300031947|Ga0310909_11131306All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium635Open in IMG/M
3300031962|Ga0307479_11944150All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium538Open in IMG/M
3300032180|Ga0307471_101195922All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium924Open in IMG/M
3300032205|Ga0307472_101644623All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium633Open in IMG/M
3300032205|Ga0307472_102536451All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium522Open in IMG/M
3300032261|Ga0306920_101591708All Organisms → cellular organisms → Bacteria930Open in IMG/M
3300032783|Ga0335079_10849357All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium942Open in IMG/M
3300032892|Ga0335081_11179270All Organisms → cellular organisms → Bacteria → Acidobacteria875Open in IMG/M
3300033158|Ga0335077_11128595All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium773Open in IMG/M
3300033405|Ga0326727_10397237Not Available1268Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil43.80%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil13.14%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil8.76%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil3.65%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil3.65%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil3.65%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland2.19%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil2.19%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.19%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil2.19%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.19%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog1.46%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.46%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil1.46%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland0.73%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil0.73%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment0.73%
SedimentEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment0.73%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring0.73%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.73%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.73%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.73%
Bog Forest SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil0.73%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.73%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil0.73%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001137Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3EnvironmentalOpen in IMG/M
3300002907Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cmEnvironmentalOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005175Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122EnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005181Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127EnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005537Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1EnvironmentalOpen in IMG/M
3300005540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005574Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143EnvironmentalOpen in IMG/M
3300005586Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006052Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013EnvironmentalOpen in IMG/M
3300006163Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaGEnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006893Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaGEnvironmentalOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009629Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_100EnvironmentalOpen in IMG/M
3300009645Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40EnvironmentalOpen in IMG/M
3300010304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015EnvironmentalOpen in IMG/M
3300010337Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015EnvironmentalOpen in IMG/M
3300010341Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010937Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139EnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012683Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012924Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012975Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015EnvironmentalOpen in IMG/M
3300012976Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300014150Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300014152Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_60_metaGEnvironmentalOpen in IMG/M
3300014155Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaGEnvironmentalOpen in IMG/M
3300015054Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015241Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015245Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300016270Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080EnvironmentalOpen in IMG/M
3300018007Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5EnvironmentalOpen in IMG/M
3300018047Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300021088Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-MEnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021171Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-MEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300025439Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_100 (SPAdes)EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300026555Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300027583Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027737Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300029636Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030813Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031682Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22EnvironmentalOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300031879Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)EnvironmentalOpen in IMG/M
3300031947Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000HEnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300032783Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3EnvironmentalOpen in IMG/M
3300032892Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5EnvironmentalOpen in IMG/M
3300033158Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1EnvironmentalOpen in IMG/M
3300033405Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MYEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12637J13337_100350413300001137Forest SoilMEVRAPKGQYRVIGLDSVDTLTWPSGPLWKDCETF
JGI25613J43889_1005210023300002907Grasslands SoilMQKQAPKGQYRVIGLDPIDTLTSPSGPVWKDCETLEEARDLANRNGELYLWVFVC
Ga0066672_1026602433300005167SoilMQTQAPRGQYRVMGLDPFDTLTWPSGPLWKDCETLDEARDFADR
Ga0066673_1089415923300005175SoilMQTQAPNGQYRVIGLDPVDTLAWPSGPLLQDCETLNEALDLADHNRALYLWVYVYDDAGV
Ga0066690_1030491813300005177SoilMQVQAPKGQYRVIGLDPIDALTGPCGPLWKDCETLGEARDVADRNSELYLWV*
Ga0066690_1105439723300005177SoilMQVQAPKGQYRVIGLDPIDTLTSPSGPLWKDCETFQEARDLAD
Ga0066684_1042992723300005179SoilMQTQAPKGQYRVIGLSPIDTLTWPSGMLCKNCETFDEARD*
Ga0066678_1085479913300005181SoilMQVQAPKGQYRVIGLDHVNTLDSPTGPLSKDFESFDEARDLADRMSEEYVWIYVYDDAG
Ga0066675_1007538653300005187SoilMQTQAPKGQYRVIGLSPIDTLTWPSGILCKDCETFDEARD*
Ga0070709_1096456323300005434Corn, Switchgrass And Miscanthus RhizosphereMEVRAPKGQYRVIGLDPVDTLTWPSGPLRKDCETFDKALDL
Ga0066682_1058932823300005450SoilMEVRAPKGQYRVIGLDPVDTLTWPSGPLWKDCETFDKALDLAASNDELY
Ga0070730_1001783913300005537Surface SoilMEVRAPKGKYRVIGLDPVDTLTWPSGPLRKDCETFDKALDLAASND
Ga0070730_1004247533300005537Surface SoilMQTRAPKGKYRVIGLDPIDTLTWPSGPLWKDCETLDEALAGC*
Ga0066697_1077592413300005540SoilMEVRAPKGQYRVIGLDPVDTLTWPSGPLWKDCETFDKALDLAASNDELYLRIY
Ga0066700_1110693323300005559SoilMQTQAPEGQYRVIGLDPVDTLTSPSGPLWKDCETFDEARDLADRN
Ga0066699_1107053923300005561SoilQTKAPSGRYRVIGLDPIDTLTWPSGPLWKDCDTLDEARDLG*
Ga0066694_1050059113300005574SoilMQTQAPEGQYRVIGLDPVDTLTWPSGPLWKDCETFDEARDLADRNGDS
Ga0066691_1079521713300005586SoilMQKQAPKGQYRVIGLDPIDTLTSPSGPLWKDCETLEETRDMANRNGESYLWVYVYD
Ga0066652_10129980323300006046SoilMQTQAPRGQYRVLGLDPFDTLTWPSGPLCRDCKTLDEARDLADRNGELYLWVCVYDDAGEVL*
Ga0075029_10081863123300006052WatershedsMEVRAPKGQYRVIGLDPVDTLTWPSGPLRKDCETFDKALDLAASNDE
Ga0070715_1026944933300006163Corn, Switchgrass And Miscanthus RhizosphereMQTQAPEGQYRVIGLDPVDTLTWPSGPLWKDCETLDGALDLAEHNRALYLWVYVYDDAGV
Ga0066665_1019830833300006796SoilMQVQAPKGQYRVIGLDHDNTLDSPSGPLRKDFESFDEARDLADRMS
Ga0066665_1040948013300006796SoilMQTQAPKGQYRVIGLDPVDSLTWPSGPLWKDCETFDKARDLADRNEESYAWVYVYDDGRQ
Ga0066665_1050014413300006796SoilMEVRAPKGQYRVIGLDPVDTLTWPSGPLRKDCETFDKALDLAASNDEL
Ga0066659_1020494313300006797SoilMQTQAPKGQYRVIGLDPVDTLTWPSGPLWRDCETFDEARDLADSNEESYAWV
Ga0066660_1108894623300006800SoilMQTRAPRGQYLVIGLDPIDTLTWPSGPLWKDCETLDEARDFADRNSDLYAWIYIYND
Ga0073928_1000521513300006893Iron-Sulfur Acid SpringMEVRAPKGHYRVIGLDPVDTLTWPSGPLRKDCETFDKALDLAA
Ga0099794_1043517413300007265Vadose Zone SoilMQKQAPKGQYRVIGLDPIDTLTSPSGPLWKDCETLEETRDMANRNGES
Ga0066710_10391968913300009012Grasslands SoilMEVRAPKGQYRVIGLDPVDTLTWPSGPLWKDCETFDKALDLAASNDELYLRIYI
Ga0066710_10418248913300009012Grasslands SoilMMQIQAPKGQYRVIGLDPVDTLSWPSGPLWKDCDSLD
Ga0099829_1126861813300009038Vadose Zone SoilMEVRAPKGQYRIIGLDRVDTLTWPSGPLLKDCETFDKA
Ga0099830_1135805323300009088Vadose Zone SoilMEVRASKGQYRVIGLDPVDTLTWPSGPLRKDCETFDK
Ga0099827_1072341113300009090Vadose Zone SoilMEVRAPKGQYRVIGLDPVDTLTWPSGPLWKDCQTLDEALDLAASNDELYLR
Ga0099792_1020446233300009143Vadose Zone SoilMQTQAPEGQYRVIGLDPVDTLTWPSGPLWKDCETFDEAR
Ga0116119_110663523300009629PeatlandMEVRAPKGQYRVIGLDPVDTLTWASGPLWKDCETFDE
Ga0116106_110383113300009645PeatlandMEVRAPKGQYRVIGLDPVDTLTWPSGPLWKDCKTFEEALDLAASNDELYLRI
Ga0134088_1045612113300010304Grasslands SoilMQTQAPEGQYRVIGLDPVDTLTWPSGPLWKDCETFDEARDLADRNGDSYAWLYVYDDAGE
Ga0134062_1010392523300010337Grasslands SoilMEVRAPKGQYRVIGLDPVDTLTWPSGPLWKDCETFDKALDLAASNDELYLRIYI*
Ga0074045_1012584213300010341Bog Forest SoilMEVRAPKGQYRLIGLDPVDTLTWASGPLWKDCETFDEALDLAASNDELYLRI
Ga0126370_1199249013300010358Tropical Forest SoilLEVRAPRGQYRVIGLDPVDTLTSPSGPLWKDCETLDEALDLADRNNDLYLRIYIYD
Ga0126378_1161271823300010361Tropical Forest SoilMRTQAPKGQYRVIGLDPVDTLTWPSGPLWKDCETFDEARDFAGRNEGS
Ga0126381_10286949813300010376Tropical Forest SoilMEVCAPKGKYRVIGLDPVDTLTWPSGPLWKDCETFDEA
Ga0137776_173657413300010937SedimentMQTQAPKGQYRVIGLDPIDTLTWPSGPLWKDCETLDEALDLADRNRA
Ga0137391_1024143733300011270Vadose Zone SoilMELRAPKGQYRVIGLDPVDTLTWPSGPLRKDCETFDKALDLAASND
Ga0137388_1142156923300012189Vadose Zone SoilMQTQAPEGQYRVIGLDPVDTLTWPSGPLWKDCETFD
Ga0137364_1101849913300012198Vadose Zone SoilMQVQAPKGQYRVIGLDPVDTLASPSGPLWKDCETFDEARDLADRNEALYFSVCVYDDAGELLYEAGRHAQ*
Ga0137382_1124459813300012200Vadose Zone SoilMQVQAPKGQYRVIGLDHVNTLDSPTGPLSKDFESFNEARDLADRMSEEYVWIYVYDDAGDVLY
Ga0137382_1128076213300012200Vadose Zone SoilMQAQAPKDQYRVIGLDPIDTLTWPSGPLWKDCETLE
Ga0137365_1075128933300012201Vadose Zone SoilMQTQAPEGQYRVIGLDPVDTLTWPSGPLWKDCETF
Ga0137399_1129496713300012203Vadose Zone SoilMQVQAPKGQFRVIGLDPIDTLTSPSGPFSKDCETLEEAVELADRSGELYLWTYV
Ga0137399_1165327813300012203Vadose Zone SoilMQTQAPKGQYRVIGLDPIDTLTWPSGPLWKDCETLDEALDLADHNRALY
Ga0137362_1103034123300012205Vadose Zone SoilMEVRAPKGRYRVIGLDPVDTLTWPSGPLWKDCETFDEALDLAAS
Ga0137362_1126478813300012205Vadose Zone SoilMQTRAPKGLYRVIGLDPIDTLTWPSGPLWKDCETLDEA
Ga0137380_1072829413300012206Vadose Zone SoilMQTQAPEGQYRVIGLDPVDTLTWPSGPLWKDCETFDEARDLADRNGDSYAWLYVYD
Ga0137380_1084851613300012206Vadose Zone SoilMQTQAPKGQYRVIGLDPVDTLTWPSGPLWKDCETFDEARDLADRNGDSYAWLYVYD
Ga0137376_1041281033300012208Vadose Zone SoilMQTQAPEGQYRVIGLDPVDTLTWPSGPLWKDCETFDKARDLADRNEESYAWVYVYDDGRQAFVRGRLPRAAA*
Ga0137376_1052224213300012208Vadose Zone SoilMLTQAPRGMYRVIGLAPIDTLTWPSGPLWKDCETLD
Ga0137376_1059971513300012208Vadose Zone SoilMQVQAPKGQFRVIGLDPIDTLTSPSGPFSKDCETLEEALELADRSGELY
Ga0137376_1109515213300012208Vadose Zone SoilMQTRAPRGQYRVIGLSPTDTLTWPSGPLWKDCETLDQARDLADRNGDLY
Ga0137379_1055705123300012209Vadose Zone SoilMQTQAPKGQYRVIGLDPVDTLTWPSGPLWKDCETFD
Ga0137378_1047041433300012210Vadose Zone SoilMQTQAPESQYRVIGLDPVDTLTWPSGPLWKDCETF
Ga0137378_1174952113300012210Vadose Zone SoilMEVRAPKGQYRVIGLDPVDTLTWPSGPLWKDCETFDKALDLAARN
Ga0137370_1001486713300012285Vadose Zone SoilMQVQAPKGQYRVIGLDPVDTLASPSGPLWKDCEMFDEARDLADRNEALYFSVCVYDDAGELLYEAGRHAQ*
Ga0137370_1071141913300012285Vadose Zone SoilMQVEAPKGQYRVIGLDPIDTLTWPSGPLWKDCETLEE
Ga0137386_1017651733300012351Vadose Zone SoilMLTQAPRGMYRVIGLAPIDTLTWPSGPLWKDCETLDE
Ga0137384_1023923013300012357Vadose Zone SoilMQTQAPKGQYRVIGLDPVDTLTWPSGPLWKDCETFDEARDLADRN
Ga0137385_1040033133300012359Vadose Zone SoilMEVCAPKGRYRVIGLDAVDTLTWPSGPLWKDCETFD
Ga0137360_1063039233300012361Vadose Zone SoilMQTQAPKGQYRVIGLDPVDTLTWPSGPLWKDCETFDEARD
Ga0137360_1077632023300012361Vadose Zone SoilMQTQAPKGQYRVIGLDPVDTLAWPSGPLWKDCETLDEALDLAD
Ga0137360_1083842313300012361Vadose Zone SoilMQTQAPTGQYRVIGLDPIDTLTSPSGPLWKDCETFDEARDLADSNGESYL
Ga0137360_1165004613300012361Vadose Zone SoilMQTQAPEGQYRVIGLDPVDTLTWPSAPLWKDCETFDEARDLADRNEESYAWVYVYDDAGK
Ga0137361_1038645713300012362Vadose Zone SoilMQTQAPEGQYRVIGLDPVDTLTWPSGPLWKDCETFDEARDLADRNEESYAWVYVYDDA
Ga0137361_1115713023300012362Vadose Zone SoilMQVQAPKGQYRVIGLDHVNTLDSPSGPLRQDFDSFEEARDLADR
Ga0137398_1030440933300012683Vadose Zone SoilMQTQAPKGQYRVIGLDPVDILTWPSGPLWKDCETFDEARDLADRNEESYAWVYI
Ga0137395_1047029123300012917Vadose Zone SoilMRVHAPKGQYRVIGLDHIDTLESPSGPLSKDFETFEEARDLADRMTQEFLWT
Ga0137396_1019361913300012918Vadose Zone SoilMQVQAPKGQYRVIGLDPVDSLSLRSGPLWKDCDSLDEARDFA
Ga0137396_1089640813300012918Vadose Zone SoilMEVHAPKGQYRVIGLEPVDTRAWPSGPLWKDCETFDKALELAASNDELYL
Ga0137394_1033198313300012922Vadose Zone SoilMQTQAPKGQYRVIGLDPVDTLTWPSGPLWKDCETFDEARDLADRNEESYAWVYV
Ga0137394_1105953113300012922Vadose Zone SoilMQVQAPKGQYRVIGLDHVDTLESPSGPLSKDFESFDEARDLADRMTEEYLWTYVYDDAGELLY
Ga0137394_1118349213300012922Vadose Zone SoilMELRAPKGQYRVIGLDPVDTLTWPSGPLRKDCETF
Ga0137359_1023573513300012923Vadose Zone SoilMEVQAPKGQYRVIGLDPIDTLTWPSGPLCKDCETFDKALDLAASND
Ga0137359_1042139013300012923Vadose Zone SoilMEVRAPKGQYRVIGLDPVDTLTWPSGPLWKDCETFDKALDLAASND
Ga0137359_1175960213300012923Vadose Zone SoilMQVQAPKGQFRVIGLDPIDTLTSPSGPFSKDCETLEEAVELADRSGE
Ga0137359_1177446013300012923Vadose Zone SoilMQVHAPKGQFRVIGLDPIDTLTSPSGPFSKDCETLEEAVELADRSGE
Ga0137413_1114022023300012924Vadose Zone SoilMQVHAPKGQYRVIGLDHIDTLDSPSGPLSKDFESLDEARDLADRMTEEYLWTYVYDDAGR
Ga0137419_1044333923300012925Vadose Zone SoilMQVQAPKGQYRVIGLDHVNTLDSPTGPLSKDFESFDE
Ga0137419_1109913423300012925Vadose Zone SoilMQTQAPEGQYRVIGLDPVDTLTWPSGPLWKDCESFDEARDLADRNEELYAWVYVYDDAGKLLYEGGCHA
Ga0137416_1076004433300012927Vadose Zone SoilMQTQAPKGQYRVIGLDPVDTLTWPSGPLWKDCETFDEARDLA
Ga0137416_1129944723300012927Vadose Zone SoilMEVRAPKGQYRVIGLDPVDTLTSPSGPLWKDCETFDEALDL
Ga0137416_1151496913300012927Vadose Zone SoilMEVRAPKGQYRVIGLDPVDTLAWPSGPLRKDCETFDKALDLAASNDELY
Ga0137407_1238374713300012930Vadose Zone SoilMQKQAPKGQYRVIGLDPIDTLTSPSGPLWKDCETLEEARDMANRNGESYLWVYVYD
Ga0134110_1027209723300012975Grasslands SoilMQVQAPKGQYRVIALDHIDTLESPSGPLSKDFESFEEARYLADRMTEEYIWTYVYDDA
Ga0134076_1027701523300012976Grasslands SoilMQTQAPEGQYRVIGLDPVDTLTWPSGPLWKDCETFDEARDLADRNEESY
Ga0134081_1042880423300014150Grasslands SoilMQTQAPKGQYRVIGLDPVDTLAWPGGPLWKDCETLDEALDLADHNRALY
Ga0181533_129827023300014152BogMEVRAPKGQYRLIGLDPVDTLTSPSGPLWKDCETFDE
Ga0181524_1001064413300014155BogMEVRAPKGQYRLIGLDPVDTLTSPSGPRWKDCETFDEALDLAASNDELYLRIYIYNDN
Ga0137420_115189813300015054Vadose Zone SoilMEVRAPKGQYRQYRVIGLDPVDTLTWPSGPLSKDCE
Ga0137418_1008749253300015241Vadose Zone SoilMQTQAPKGQYRVIGLDPVDTLGWSSGPLLQDCETLDEALDLADHNRALHLWVYVY
Ga0137418_1063195423300015241Vadose Zone SoilMQTQAPKGQYRVIGLDPIDTLTSPSGPLWKDCETLDEARDFADRNG
Ga0137409_1077647523300015245Vadose Zone SoilMEVRAPKGQYRVIGLDPVDPLTWPSGPLWKDCETF
Ga0182036_1185132413300016270SoilMKTQAPKGQYRVIGLDPIDTLTWPSGPLWKDCETFDEARDLADRNGELYL
Ga0187805_1039676213300018007Freshwater SedimentMQKQAPKGQYRVIGLDPIDTLTSPSGPLWKDCETLDGALDLADHNR
Ga0187859_1085492323300018047PeatlandMEVRAPKGQYRVIGLDPVDTLTWPSGPLWKDCKTFEEALDL
Ga0066669_1155305713300018482Grasslands SoilMQVQAPKGQYRVIGLDPVDTLTWPSGPLCQDRETFEEARDLAERN
Ga0210407_1056286913300020579SoilMEVRAPKGQYRVIGLDPVDTLTWPSGPLRKDCETFDKALDLAASNDYLYL
Ga0210403_1100857123300020580SoilMQTKAPEGQYRVIGLDPVDTLTWPSGPLWKDCETFDEARDLADRNEESYAWVYVYDDA
Ga0210404_1042908023300021088SoilMEVRAPKGQYRVIGLDPVDTLTWPSGPLRKDCETFDKALDLAASN
Ga0210400_1030425113300021170SoilMQTQAPEGQYRVIGLDPVDTLTWPSGPLWKDCETFN
Ga0210405_1061795923300021171SoilMEVRAPKGQYWVVGLDPVDTLTWPSGPLWKDCGTFDEAL
Ga0210405_1067668013300021171SoilMQFHAPKGQYRVIGLDHINTLDSPSGPLCKDLERFDEARDLADRMTEEYLWTYVY
Ga0210384_1048615333300021432SoilMEVRAPKGQYRVIGLDPVDTLTWPSGPLRKDCETFDEALDLAASNDELYL
Ga0210402_1177978913300021478SoilMQVQAPKGQYRVIGLDPIDTLTWPSGPLWKDCETLEEALEFADSNGESYLWIYVY
Ga0210410_1145811723300021479SoilMEVCAPKGQYRVIGLDPVDTLAWPSGPLWKDCETLDEALDLA
Ga0208323_106605223300025439PeatlandMEVRAPKGQYRVIGLDPVDTLTWASGPLWKDCETFDEALDLAASNDE
Ga0207684_1047939313300025910Corn, Switchgrass And Miscanthus RhizosphereMQTQAPEGQYRVIGLDPVDTLTWPSGPLWKDCETFDEARDLADRNEESYA
Ga0209648_1045893023300026551Grasslands SoilMEVRAPKGQYRVIGLDPVDTLTWPSGPLRKDCETFDKALDLAA
Ga0179593_102487143300026555Vadose Zone SoilMHVQAPKGQFRVIGLDPIDTLTSPSGPFSQDCETLEE
Ga0209527_104635633300027583Forest SoilMQTRAPKGQYRVIGLDPVDTLAWPSGPLSKDCETLDEALDLADRNRAFYLWLYVYDDAGVLLHETG
Ga0209038_1018922013300027737Bog Forest SoilMEVRAPKGQYRVIGLDPVDTLTWPSGPLWKDCETFDEAL
Ga0209488_1097230523300027903Vadose Zone SoilMEVRAPKGQYRVIGLDPVDTLTWPSGPLWKDCETFDK
Ga0137415_1048846933300028536Vadose Zone SoilMQTQAPKGQYRVIGLDPIDTLTSPSGPLWKDCETFDEARDFADRNGESYLW
Ga0222749_1017153713300029636SoilMEVRAPKGQYRVIGLDPVDTLTWPSGPLRKDCETFD
Ga0265750_105265013300030813SoilMEVRAPKGQYRVIGLDPVDTLTWPSGPLRKDCETFDKALDLAASNDELYLW
Ga0170834_11176365223300031057Forest SoilMEVRAPKGQYRVIGLDPVDTLTWPSGPLRKDCETFDK
Ga0318560_1069958013300031682SoilMEVCAPKGKYRVIGLDPVDTLTWPSGPLWKDCETF
Ga0307478_1092201513300031823Hardwood Forest SoilMEVRAPKGQYRVIGLDPVDTLTWPGGPLWKDCETFDEALDLAAS
Ga0306919_1047384623300031879SoilMDVRAPKGQYRVIGLDPVDTLTWPSGPLWKDCETFDEALEVAATNDE
Ga0310909_1113130613300031947SoilMEVCAPRGKYRVIGLDPVDTLTWPSGPLWKDCETFDEALDFAASNDESYLHIYIY
Ga0307479_1194415013300031962Hardwood Forest SoilMQTQAPKGQYRVIGLDPVDTLAWPSGPLWKDCETLDDAL
Ga0307471_10119592233300032180Hardwood Forest SoilMQTQAPEGQYRVIGLDPVDTLTWPSGPLWKDCETFDEARDLADRNEESYAWVYVYDD
Ga0307472_10164462313300032205Hardwood Forest SoilMEVRAPKGQFRVIGLDPVDTLTWPSGPLWKDCETFDKA
Ga0307472_10253645113300032205Hardwood Forest SoilMEVRAPKGQYRVIGLDPVDTLTWPSGPLWKDCETF
Ga0306920_10159170823300032261SoilMEVRAAKGQYRVIGLDPVDTLAWPNGPLCKDCETFDEAL
Ga0335079_1084935733300032783SoilMQTQAPEGQYRVIGLDPVDTLTWPSGPLWKDCDTFDEARDLADRNEESYAWVYVYDDA
Ga0335081_1117927023300032892SoilMQTRAPKGQYRVIGLDPIDTLTWPSGPLWKDCETLD
Ga0335077_1112859523300033158SoilMQTQAPEGQYRVIGLDPVDTLTWPSGPLWKDCETFEEARDLADRNEESYAWVYVYDDAGKLLY
Ga0326727_1039723723300033405Peat SoilMEVRAPKGQYRVIGLDPVDTLTSPSGPLWKDCGTFDEALDLAASNDELYLRIYIY


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