NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F057249

Metagenome / Metatranscriptome Family F057249

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F057249
Family Type Metagenome / Metatranscriptome
Number of Sequences 136
Average Sequence Length 60 residues
Representative Sequence MALTGWFDRIRSRCRRESAQTMAEYAVILGVITPAIIIALGLFSDRVGQLLDSVRSLL
Number of Associated Samples 113
Number of Associated Scaffolds 136

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 21.48 %
% of genes near scaffold ends (potentially truncated) 24.26 %
% of genes from short scaffolds (< 2000 bps) 77.94 %
Associated GOLD sequencing projects 106
AlphaFold2 3D model prediction Yes
3D model pTM-score0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (72.059 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(26.471 % of family members)
Environment Ontology (ENVO) Unclassified
(32.353 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(53.676 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 63.95%    β-sheet: 0.00%    Coil/Unstructured: 36.05%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.43
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 136 Family Scaffolds
PF16317Glyco_hydro_99 29.41
PF01479S4 24.26
PF01979Amidohydro_1 4.41
PF11856DUF3376 3.68
PF01810LysE 2.21
PF13561adh_short_C2 1.47
PF00483NTP_transferase 1.47
PF13560HTH_31 1.47
PF00589Phage_integrase 1.47
PF02033RBFA 0.74
PF13551HTH_29 0.74
PF04964Flp_Fap 0.74
PF08281Sigma70_r4_2 0.74
PF01066CDP-OH_P_transf 0.74
PF13683rve_3 0.74

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 136 Family Scaffolds
COG0558Phosphatidylglycerophosphate synthaseLipid transport and metabolism [I] 0.74
COG0858Ribosome-binding factor RbfATranslation, ribosomal structure and biogenesis [J] 0.74
COG1183Phosphatidylserine synthaseLipid transport and metabolism [I] 0.74
COG3847Flp pilus assembly protein, pilin FlpExtracellular structures [W] 0.74
COG5050sn-1,2-diacylglycerol ethanolamine- and cholinephosphotranferasesLipid transport and metabolism [I] 0.74

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms72.06 %
UnclassifiedrootN/A27.94 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000033|ICChiseqgaiiDRAFT_c1863015All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria561Open in IMG/M
3300000880|AL20A1W_1103819All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria503Open in IMG/M
3300000887|AL16A1W_10361433All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria679Open in IMG/M
3300000956|JGI10216J12902_114604097All Organisms → cellular organisms → Bacteria2797Open in IMG/M
3300001333|A21PFW6_1010829All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2229Open in IMG/M
3300001535|A3PFW1_10097547All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2409Open in IMG/M
3300001537|A2065W1_10106417All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1658Open in IMG/M
3300001664|P5cmW16_1061733All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria636Open in IMG/M
3300004114|Ga0062593_100077141All Organisms → cellular organisms → Bacteria2237Open in IMG/M
3300004114|Ga0062593_102128278All Organisms → cellular organisms → Bacteria627Open in IMG/M
3300004156|Ga0062589_102586608Not Available526Open in IMG/M
3300004643|Ga0062591_102084323Not Available587Open in IMG/M
3300005172|Ga0066683_10141312Not Available1475Open in IMG/M
3300005176|Ga0066679_10725681All Organisms → cellular organisms → Bacteria642Open in IMG/M
3300005180|Ga0066685_10431886All Organisms → cellular organisms → Bacteria914Open in IMG/M
3300005181|Ga0066678_10018307All Organisms → cellular organisms → Bacteria3611Open in IMG/M
3300005181|Ga0066678_10783742All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria631Open in IMG/M
3300005440|Ga0070705_100839333All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria734Open in IMG/M
3300005444|Ga0070694_100956992Not Available709Open in IMG/M
3300005445|Ga0070708_100010667All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria7453Open in IMG/M
3300005468|Ga0070707_100011174All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria8368Open in IMG/M
3300005518|Ga0070699_100079253All Organisms → cellular organisms → Bacteria2861Open in IMG/M
3300005518|Ga0070699_100802776All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium861Open in IMG/M
3300005549|Ga0070704_102030064All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Curvibacter → Curvibacter putative symbiont of Hydra magnipapillata534Open in IMG/M
3300005553|Ga0066695_10307871Not Available998Open in IMG/M
3300005556|Ga0066707_10033489All Organisms → cellular organisms → Bacteria2867Open in IMG/M
3300005557|Ga0066704_10769096All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria601Open in IMG/M
3300005842|Ga0068858_101529215Not Available658Open in IMG/M
3300006034|Ga0066656_10080962All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1938Open in IMG/M
3300006791|Ga0066653_10452939All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia654Open in IMG/M
3300006797|Ga0066659_10233919All Organisms → cellular organisms → Bacteria1366Open in IMG/M
3300006881|Ga0068865_100777164All Organisms → cellular organisms → Bacteria824Open in IMG/M
3300007255|Ga0099791_10106500All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1293Open in IMG/M
3300009012|Ga0066710_100249181All Organisms → cellular organisms → Bacteria2568Open in IMG/M
3300009012|Ga0066710_101074559All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1244Open in IMG/M
3300009038|Ga0099829_10004155All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria8552Open in IMG/M
3300009090|Ga0099827_10002550All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria10103Open in IMG/M
3300009090|Ga0099827_10150628All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1903Open in IMG/M
3300009090|Ga0099827_11201732All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria659Open in IMG/M
3300009137|Ga0066709_100083128All Organisms → cellular organisms → Bacteria3832Open in IMG/M
3300009137|Ga0066709_100325538All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2100Open in IMG/M
3300009137|Ga0066709_101413034Not Available1011Open in IMG/M
3300009176|Ga0105242_11162773Not Available789Open in IMG/M
3300010396|Ga0134126_13110147All Organisms → cellular organisms → Bacteria500Open in IMG/M
3300011269|Ga0137392_10161818All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1813Open in IMG/M
3300011998|Ga0120114_1038322All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria957Open in IMG/M
3300012011|Ga0120152_1060577All Organisms → cellular organisms → Bacteria1178Open in IMG/M
3300012096|Ga0137389_10645170All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria910Open in IMG/M
3300012198|Ga0137364_10738967Not Available743Open in IMG/M
3300012200|Ga0137382_10254984All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1216Open in IMG/M
3300012200|Ga0137382_10265003All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae1193Open in IMG/M
3300012206|Ga0137380_10053077All Organisms → cellular organisms → Bacteria3717Open in IMG/M
3300012207|Ga0137381_10830788Not Available800Open in IMG/M
3300012208|Ga0137376_10003675All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia9646Open in IMG/M
3300012209|Ga0137379_10044224All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria4297Open in IMG/M
3300012209|Ga0137379_11014184All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria735Open in IMG/M
3300012210|Ga0137378_10968021Not Available765Open in IMG/M
3300012923|Ga0137359_11115314All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria675Open in IMG/M
3300012923|Ga0137359_11503273All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria561Open in IMG/M
3300012925|Ga0137419_10921422All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium720Open in IMG/M
3300012929|Ga0137404_10409982All Organisms → cellular organisms → Bacteria1196Open in IMG/M
3300012929|Ga0137404_12170575All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria519Open in IMG/M
3300012961|Ga0164302_11491945All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium557Open in IMG/M
3300012972|Ga0134077_10394397All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria597Open in IMG/M
3300012986|Ga0164304_10214867All Organisms → cellular organisms → Bacteria1265Open in IMG/M
3300013501|Ga0120154_1028305Not Available1413Open in IMG/M
3300013768|Ga0120155_1071142All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria998Open in IMG/M
3300013770|Ga0120123_1104867All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria647Open in IMG/M
3300013772|Ga0120158_10070660Not Available2255Open in IMG/M
3300014058|Ga0120149_1063084All Organisms → cellular organisms → Bacteria952Open in IMG/M
3300014827|Ga0120171_1151547All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium530Open in IMG/M
3300015209|Ga0167629_1050552All Organisms → cellular organisms → Bacteria1395Open in IMG/M
3300015245|Ga0137409_11323654All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria563Open in IMG/M
3300017659|Ga0134083_10198682Not Available827Open in IMG/M
3300018027|Ga0184605_10407395All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria606Open in IMG/M
3300018027|Ga0184605_10409205All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium604Open in IMG/M
3300018051|Ga0184620_10329816Not Available517Open in IMG/M
3300018054|Ga0184621_10152976Not Available831Open in IMG/M
3300018061|Ga0184619_10032127All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2219Open in IMG/M
3300018061|Ga0184619_10035986All Organisms → cellular organisms → Bacteria2108Open in IMG/M
3300018071|Ga0184618_10006247Not Available3372Open in IMG/M
3300018071|Ga0184618_10078541All Organisms → cellular organisms → Bacteria1258Open in IMG/M
3300018071|Ga0184618_10112430All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1081Open in IMG/M
3300018076|Ga0184609_10416582Not Available622Open in IMG/M
3300018433|Ga0066667_10171757All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1558Open in IMG/M
3300019279|Ga0184642_1009552Not Available540Open in IMG/M
3300019789|Ga0137408_1279705Not Available1818Open in IMG/M
3300019873|Ga0193700_1000774Not Available4146Open in IMG/M
3300019873|Ga0193700_1005262All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1986Open in IMG/M
3300019887|Ga0193729_1000024All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria75142Open in IMG/M
3300020001|Ga0193731_1079836All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium853Open in IMG/M
3300021080|Ga0210382_10035133Not Available1906Open in IMG/M
3300021363|Ga0193699_10354140All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria611Open in IMG/M
3300021418|Ga0193695_1014133All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1627Open in IMG/M
3300022694|Ga0222623_10093972All Organisms → cellular organisms → Bacteria1165Open in IMG/M
3300025910|Ga0207684_10092821All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2573Open in IMG/M
3300025922|Ga0207646_10035246All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria4520Open in IMG/M
3300025934|Ga0207686_11800038Not Available507Open in IMG/M
3300025960|Ga0207651_11573152All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria592Open in IMG/M
3300026121|Ga0207683_11629230Not Available595Open in IMG/M
3300026343|Ga0209159_1089536All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1363Open in IMG/M
3300026528|Ga0209378_1086976All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1401Open in IMG/M
3300026540|Ga0209376_1360057All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria548Open in IMG/M
3300027846|Ga0209180_10604625All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria605Open in IMG/M
3300027875|Ga0209283_10634220All Organisms → cellular organisms → Bacteria674Open in IMG/M
3300027882|Ga0209590_10186697All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1305Open in IMG/M
3300027903|Ga0209488_11189309Not Available514Open in IMG/M
3300028705|Ga0307276_10000236All Organisms → cellular organisms → Bacteria → Terrabacteria group6623Open in IMG/M
3300028713|Ga0307303_10091383Not Available689Open in IMG/M
3300028715|Ga0307313_10066573All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1072Open in IMG/M
3300028718|Ga0307307_10006141All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3097Open in IMG/M
3300028719|Ga0307301_10117520Not Available848Open in IMG/M
3300028720|Ga0307317_10075736All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1100Open in IMG/M
3300028721|Ga0307315_10019006All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1767Open in IMG/M
3300028744|Ga0307318_10290270Not Available573Open in IMG/M
3300028768|Ga0307280_10327690All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria562Open in IMG/M
3300028771|Ga0307320_10321492All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria616Open in IMG/M
3300028784|Ga0307282_10040034All Organisms → cellular organisms → Bacteria2062Open in IMG/M
3300028784|Ga0307282_10353534Not Available710Open in IMG/M
3300028793|Ga0307299_10409242Not Available508Open in IMG/M
3300028802|Ga0307503_10561422All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria624Open in IMG/M
3300028802|Ga0307503_10658441All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria584Open in IMG/M
3300028803|Ga0307281_10149639Not Available818Open in IMG/M
3300028807|Ga0307305_10077525All Organisms → cellular organisms → Bacteria1534Open in IMG/M
3300028824|Ga0307310_10414205Not Available670Open in IMG/M
3300028828|Ga0307312_10948816Not Available570Open in IMG/M
3300028828|Ga0307312_11176196Not Available507Open in IMG/M
3300028875|Ga0307289_10361681Not Available597Open in IMG/M
3300028878|Ga0307278_10022715All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2891Open in IMG/M
3300028878|Ga0307278_10327203Not Available676Open in IMG/M
3300028880|Ga0307300_10287433Not Available554Open in IMG/M
3300028881|Ga0307277_10039358All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1905Open in IMG/M
3300028881|Ga0307277_10047346All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium1747Open in IMG/M
3300028884|Ga0307308_10145562All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1134Open in IMG/M
3300031152|Ga0307501_10094917All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria745Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil26.47%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil19.85%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil11.76%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost10.29%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment7.35%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere6.62%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil5.15%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil2.94%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment1.47%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil1.47%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.47%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.74%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.74%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil0.74%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.74%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.74%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.74%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.74%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000033Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000880Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A35-65cm-20A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300000887Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A3-65cm-16A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300001333Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A21-PF)- 6 month illuminaEnvironmentalOpen in IMG/M
3300001535Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A3-PF-15A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300001537Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A20-65 cm-11A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300001664Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - 5cm_reassembledEnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005172Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132EnvironmentalOpen in IMG/M
3300005176Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005181Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127EnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005553Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144EnvironmentalOpen in IMG/M
3300005556Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156EnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300006034Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105EnvironmentalOpen in IMG/M
3300006791Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011998Permafrost microbial communities from Nunavut, Canada - A30_35cm_6MEnvironmentalOpen in IMG/M
3300012011Permafrost microbial communities from Nunavut, Canada - A30_65cm_6MEnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300012972Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300013501Permafrost microbial communities from Nunavut, Canada - A35_65cm_0.25MEnvironmentalOpen in IMG/M
3300013768Permafrost microbial communities from Nunavut, Canada - A35_65cm_0MEnvironmentalOpen in IMG/M
3300013770Permafrost microbial communities from Nunavut, Canada - A15_5cm_18MEnvironmentalOpen in IMG/M
3300013772Permafrost microbial communities from Nunavut, Canada - A10_80_0.25MEnvironmentalOpen in IMG/M
3300014058Permafrost microbial communities from Nunavut, Canada - A3_65cm_0.25MEnvironmentalOpen in IMG/M
3300014827Permafrost microbial communities from Nunavut, Canada - A3_80cm_18MEnvironmentalOpen in IMG/M
3300015209Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G3B, Proglacial river margin, by glacier terminus)EnvironmentalOpen in IMG/M
3300015245Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300017659Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300018027Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coexEnvironmentalOpen in IMG/M
3300018051Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1EnvironmentalOpen in IMG/M
3300018054Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1EnvironmentalOpen in IMG/M
3300018061Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1EnvironmentalOpen in IMG/M
3300018071Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1EnvironmentalOpen in IMG/M
3300018076Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coexEnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300019279Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019789Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300019873Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s1EnvironmentalOpen in IMG/M
3300019887Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2EnvironmentalOpen in IMG/M
3300020001Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2EnvironmentalOpen in IMG/M
3300021080Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redoEnvironmentalOpen in IMG/M
3300021363Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2EnvironmentalOpen in IMG/M
3300021418Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s2EnvironmentalOpen in IMG/M
3300022694Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coexEnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026121Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026343Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)EnvironmentalOpen in IMG/M
3300026528Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)EnvironmentalOpen in IMG/M
3300026540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)EnvironmentalOpen in IMG/M
3300027846Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300028705Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115EnvironmentalOpen in IMG/M
3300028713Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184EnvironmentalOpen in IMG/M
3300028715Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203EnvironmentalOpen in IMG/M
3300028718Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194EnvironmentalOpen in IMG/M
3300028719Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182EnvironmentalOpen in IMG/M
3300028720Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357EnvironmentalOpen in IMG/M
3300028721Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355EnvironmentalOpen in IMG/M
3300028744Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367EnvironmentalOpen in IMG/M
3300028768Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119EnvironmentalOpen in IMG/M
3300028771Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369EnvironmentalOpen in IMG/M
3300028784Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121EnvironmentalOpen in IMG/M
3300028793Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159EnvironmentalOpen in IMG/M
3300028802Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_SEnvironmentalOpen in IMG/M
3300028803Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120EnvironmentalOpen in IMG/M
3300028807Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186EnvironmentalOpen in IMG/M
3300028824Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197EnvironmentalOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300028875Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143EnvironmentalOpen in IMG/M
3300028878Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117EnvironmentalOpen in IMG/M
3300028880Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181EnvironmentalOpen in IMG/M
3300028881Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116EnvironmentalOpen in IMG/M
3300028884Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195EnvironmentalOpen in IMG/M
3300031152Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_SEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
ICChiseqgaiiDRAFT_186301523300000033SoilMPGKMAFYGWFEWARSRWRREKAQTMAEYAVVLAVITPAIILAYGLLSGKVGQLIVAVRALL*
AL20A1W_110381913300000880PermafrostIRSRCRREGAQTMAEYAVVLGVIVPAIVIAYAAFSDDIARLVDSVRSLL*
AL16A1W_1036143323300000887PermafrostMPGNMAFHRWFDSIRSRCSREGAQTMAEYAVTLAVITPAIIIAYGLFSDQIASMIDSVRSLL*
JGI10216J12902_11460409713300000956SoilMSGRMALYRWFDRTRSRCRGEKGQTMAEYAVVLGVIVPAILIAYGLLSDRVAAIIDLVRGLLS*
A21PFW6_101082923300001333PermafrostMPGNMAFYGWFDRIRSRCRREGAQTMAEYAVVLGVIVPAIVIAYAAFSDDIARLVDSVRSLL*
A3PFW1_1009754713300001535PermafrostMPGNMAFYGWFDRIRSRCRREGAQTMAEYAITLAVITPAIIIAYGLFSDQIGRLLDSVRSILG*
A2065W1_1010641733300001537PermafrostMPGKMAFHGWFDRLRSRCRLEKAQTMAEYAVVLGVIVPAIILSYGLFSDKIAQLIHSAVSILT*
P5cmW16_106173323300001664PermafrostMPRNMAPSGWFDRIRSYCRRENAQTMAEYAVILGVITPAIIIALGLLSGRVAQLLDSVRSLF*
Ga0062593_10007714123300004114SoilMAFAGWLDRIRSRWRPEGAQTMAEYGIVLAVITPAIIIAYGLFSGKIGELIDSVRAILT*
Ga0062593_10212827823300004114SoilMPGKMAFYGWFEWARSRWRREKAQTMAEYAVVLAVITPAIILAYGLLSGKVGQLIDAVRALL*
Ga0062589_10258660823300004156SoilMSGKMAFSGWFEWTRSRCRREKAQTMAEYAVVLGVIVPAIILSYGLFSDKIAQLINAAVGILT*
Ga0062591_10208432323300004643SoilMPGKMAFHGWFEWARSRWHREKAQTMAEYAVVLAVITPAIILAYGLLSGKVGQLIDAVRALL*
Ga0066683_1014131233300005172SoilMPREMALTGWFDRIRSRCRRESAQTMAEYAVILGVITPAIIIALGLFSDRVGQLLDSVRSLL*
Ga0066679_1072568133300005176SoilDEAYGSEAATPILSDMASSGWFDRIRSHCRRESAQTMAEYAVILGVITPAIIVALALLSDKVAMLIDSVRALL*
Ga0066685_1043188623300005180SoilMPGRMALYRWFDRTRSHCRGEKGQTMAEYAVVLGVIVPAILIAYGLLSDKVAALIDTVRGLLS*
Ga0066678_1001830743300005181SoilMASSGWFERIRSHYRRESAQTMAEYAVILGVITPAIIIALTLLSDKVALLIDSVRALL*
Ga0066678_1078374223300005181SoilMARSGWFGRILSRCRREGAQTMAEYAVVLAVITPGIIIVLGLFSDDIGRLFDSVRALF*
Ga0070705_10083933313300005440Corn, Switchgrass And Miscanthus RhizosphereMAFSGWFEWARSRCRREKAQTMAEYAVVLGVIVPAIILSYGLFSDKIAQLINAAVGILT*
Ga0070694_10095699213300005444Corn, Switchgrass And Miscanthus RhizosphereMSGKMAFSGWFEWARSRCRREKAQTMAEYAVVLGVIVPAIILSYGLFSDKIAQLINAAVGILT*
Ga0070708_10001066733300005445Corn, Switchgrass And Miscanthus RhizosphereVDAVTPIPSDMAPSGWFDRIRPHRRREDAQTMAEYAVVLGVIVPAIVISYAAFSDDIARLIDSVRSIL*
Ga0070707_10001117433300005468Corn, Switchgrass And Miscanthus RhizosphereVDALTPIPSDMAPSGWFDRIRPHRRREDAQTMAEYAVVLGVIVPAIVISYAAFSDDIARLIDSVRSIL*
Ga0070699_10007925323300005518Corn, Switchgrass And Miscanthus RhizosphereMARPGWFDRILSRCRRETAQTMAEYAVVLAVITPGIIIVLGLFSDDIGRLLDSVRALF*
Ga0070699_10080277613300005518Corn, Switchgrass And Miscanthus RhizosphereMAISGWFDRIRFWFRRENAQTMAEYAVVLGVIVPAILIAYGLLSDRITALIDSVRSLL*
Ga0070704_10203006413300005549Corn, Switchgrass And Miscanthus RhizospherePAPMPGKMAFYGWFEWARSRWRREKAQTMAEYAVVLAVITPAIILAYGLLSGKVGQLIDAVRALL*
Ga0066695_1030787133300005553SoilMPGVMGFYGWFDWASSRCRREKGQTMAEYAVVLGVIVPAIIIAYTLLSDRIAALIDSVRALIS*
Ga0066707_1003348963300005556SoilRIRSHYRRESAQTMAEYAVILGVITPAIIIALTLLSDKVALLIDSVRALL*
Ga0066704_1076909613300005557SoilVDAVAPIPSDMALSGWLDRIRSHRRREDAQTMAEYAVVLGVIVPAIVISYAAFSDDIARLIDSVRSLL*
Ga0068858_10152921523300005842Switchgrass RhizosphereIRCRCAHEKAQTMAEYAVVLAVITPAIVIAYGLFSGKIGTLLSNVASLL*
Ga0066656_1008096223300006034SoilMPGRMALYRWFDRTRSRCRGEKGQTMAEYAVVLGVIVPAILIAYGLLSDKVAALIDTVRGLLS*
Ga0066653_1045293913300006791SoilMPGVMGFYGWFDWASSRCRREKGQTMAEYAVVLGVIVPAIIIAYTLLSDRIAALIDSVRALI
Ga0066659_1023391913300006797SoilMASSGWFDRIRSHYRRESAQTMAEYAVILGVITPAIIIALTLLSDKVALLIDSVRALL*
Ga0068865_10077716423300006881Miscanthus RhizosphereMAFQVWFDRIRCRCAHEKAQTMAEYAVVLAVITPAIVIAYGLFSGKIGTLLSNVASLL*
Ga0099791_1010650023300007255Vadose Zone SoilMALSGWLDRIRSHRRREDAQTMAEYAVVLGVIVPAIVISYAAFSDDIARLIDSVRSLL*
Ga0066710_10024918123300009012Grasslands SoilMPGRMALYRWFDRTRSRCRGEKGQTMAEYAVVLGVIVPAILIAYGLLSDKVAALIDTVRGLLS
Ga0066710_10107019423300009012Grasslands SoilMAFSSWIDRIRSCWHRCEAQTMAEYAVILGVITPAIIVAYGLFSDDIGRLLDSVRAVF
Ga0066710_10107455923300009012Grasslands SoilMARSGWFDRILSRCRREGAQTMAEYAVVLAVITPGIIIVLGLFSDDIGRLLDSVRALF
Ga0099829_1000415573300009038Vadose Zone SoilMAPSGWFDRIRSYRRREDAQTMAEYAVVLGVIVPAIVIAYAAFSDDIARLIDSVRSLL*
Ga0099827_1000255073300009090Vadose Zone SoilMAFYRWLDRIRSRCGSEGAQTMAEYAITLAVITPAIIIAYGLFSDQIGRLLDSVRALL*
Ga0099827_1015062833300009090Vadose Zone SoilMASSGWFDRIRSRSRPETAQTMAEYAVILGVITPAIIIALGLLSDRVAQLLDSVRSLF*
Ga0099827_1120173223300009090Vadose Zone SoilMAIPSWIDRIRSCWHRCEAQTMAEYAVILGVITPAIIVAYGLFADDIGRLLDSVRGLL*
Ga0066709_10008312843300009137Grasslands SoilMARSGSFGRILSRCRREGAQTMAEYAVVLAVITPGIIIVLGLFSDDIGRLLDSVRALF*
Ga0066709_10032553823300009137Grasslands SoilMALYRWFDRTRSRCRGEKGQTMAEYAVVLGVIVPAILIAYGLLSDKVAALIDTVRGLLS*
Ga0066709_10141303423300009137Grasslands SoilMALTGWFDRIRSRCRRESAQTMAEYAVILGVITPAIIIALGLFSDRVGQLLDSVRSLL*
Ga0105242_1116277323300009176Miscanthus RhizosphereMAFYGWFEWARSRWRREKAQTMAEYAVVLAVITPAIILAYGLLSGKVGQLIDAVRALL*
Ga0134126_1311014723300010396Terrestrial SoilIRAEPMSGKMAFSGWFEWTRSRCRREKAQTMAEYAVVLGVIVPAIILSYGLFSDKIAQLINAAVGILT*
Ga0137392_1016181843300011269Vadose Zone SoilMTFFGWIDRIRSRCGHEGAQTMAEYAVILGVITPAIIIAYGLLSGTIGNMLNSVSSLL*
Ga0120114_103832213300011998PermafrostMAPSGWFDRIRSYCRRENAQTMAEYAVILGVITPAIIIALGLLSGRVAQLLDSVRSLF*
Ga0120152_106057723300012011PermafrostMAFYGWFDRIRSRCRREGAQTMAEYAITLAVITPAIIIAYGLFSDQIGRLLDSVRSILG*
Ga0137389_1064517013300012096Vadose Zone SoilMTFFGWIDRTRSRCGHEGAQTMAEYAVILGVITPAIIIAYGLLSGTIGNMLNSVSSLL*
Ga0137364_1073896723300012198Vadose Zone SoilMAFHRWFDRIRSRCSREGAQTMAEYAVTLAVITPAIIIAYGLFSDQIARMIDSVRSLL*
Ga0137382_1025498423300012200Vadose Zone SoilMPRPGWYDRILSRWRRETAQTMAEYAVVLAVITPGIIIVLGLFSDDIGRLLDSVRALF*
Ga0137382_1026500323300012200Vadose Zone SoilMTFLGWIDRIRSRCGHERAQTMAEYAVILGVITPAIIIAYGLFSGTIANLLSSVGSLL*
Ga0137380_1005307743300012206Vadose Zone SoilMALYRWFDRTRSRCRGEKGQTMAEYAVVLGVIVPAILIAYGLLSDKVAAIIDAVRGLLS*
Ga0137381_1083078833300012207Vadose Zone SoilSRCRGEKGQTMAEYAVVLGVIVPAILIAYGLLSDKVAAIIDAVRGLLS*
Ga0137376_1000367553300012208Vadose Zone SoilMARSGWFDRILSRCRRETAQTMAEYAVVLAVITPGIIIVLGLFSDDIGHLLDSVRALF*
Ga0137379_1004422423300012209Vadose Zone SoilMASPGWFDRIRSRCRRENAQTMAEYAVILGVITPAIIIALGLFSDRVGQLFDSVRSIF*
Ga0137379_1101418423300012209Vadose Zone SoilMAFYRWLDRIRSRCGPEGAQTMAEYAITLAVITPAIIIAYGLFSDQIGRLLDSVRSILG*
Ga0137378_1096802123300012210Vadose Zone SoilWDGARADATDMPRPGWYDRILSRWRRETAQTMAEYAVVLAVITPGIIIVLGLFSDDIGRLLDSVRALF*
Ga0137359_1111531413300012923Vadose Zone SoilMALSGWLDRIRSHRRREDAQTMAEYAVVLGVIVPAIVISYAAFSNDIARLIDSVRSLL*
Ga0137359_1150327323300012923Vadose Zone SoilMASSGWFERIRSHWRRESAQTMAEYAVILGVITPAIIIALALLSDKVAMLIDSVRALL*
Ga0137419_1092142223300012925Vadose Zone SoilDSAHMTFLGWIDRIRSRCGHEGAQTMAEYAVILGVITPAIIIAYGLFSGTIANLLSSVGSLL*
Ga0137404_1040998223300012929Vadose Zone SoilMARPGWFDRIFSRCRRETAQTMAEYAVVLAVITPGIIIVLGLFSDDIGRLLDSVRALF*
Ga0137404_1217057523300012929Vadose Zone SoilMAISGWFDRIRFRFRRENAQTMAEYAVVLGVIVPAILIAYALLSDRVAALIDSVRSLL*
Ga0164302_1149194513300012961SoilMAPSGWFDRIRPHRRREDAQTMAEYAVVLGVLVPAIVISYAAFSDDIARLIDSVRSLL*
Ga0134077_1039439723300012972Grasslands SoilMPREMALTGWFDRIRSRCRRESAQTMAEYAVVLGVIVPAILIAYGLLSDRITALIDSVRSLL*
Ga0164304_1021486713300012986SoilMATSGWFDRIRTRCRRETGQTMAEYAVVLGVIVPFIVIAYAAFSDDIAKLVDSVRSLL*
Ga0120154_102830543300013501PermafrostMAFHGWFDRLRSRCRLEKAQTMAEYAVVLGVIVPAIILSYGLFSDKIAQLIHSAVSILT*
Ga0120155_107114223300013768PermafrostMASSGWFDRIRFRCRDENAQTMAEYAVILGVITPAIIIALGLFSDRVAQLFDSVRSVF*
Ga0120123_110486713300013770PermafrostMAFYGWFDRIRSRCRREGAQTMAEYAVVLGVIVPAIVIAYAAFSDDIARLVVIV
Ga0120158_1007066023300013772PermafrostMPGKMAFYGWFDRIRSRCRREKAQTMAEYAVVLGVIVPAILIGYTLLSDRVAALLDSVRALLS*
Ga0120149_106308423300014058PermafrostMAFHRWFDSIRSRCSREGAQTMAEYAVTLAVITPAIIIAYGLFSDQIASMIDSVRSLL*
Ga0120171_115154713300014827PermafrostMASSGWFDRIRFRCRDENAQTMAEYAVILGVITPAIIIAYGLFSDQIGRLLDSVRSILG*
Ga0167629_105055223300015209Glacier Forefield SoilMTPPGRFNRIRFRCREDAQTMAEYAITLAVITPAIIIAYGLFSDDIARLINSVRSIL*
Ga0137409_1132365413300015245Vadose Zone SoilMAFYRWLDRIRSRCSREGAQTMAEYAVTLAVITPAIIIAYGLFSDQIARMIDSVRGLL*
Ga0134083_1019868223300017659Grasslands SoilYRWFDRTRSRCRGEKGQTMAEYAVVLGVIVPAILIAYGLLSDKVAALIDTVRGLLS
Ga0184605_1040739513300018027Groundwater SedimentMPRPGWFDRILSRCRLETAQTMAEYAVVLAVITPGIIIVLGLFSDDIGHLLDSVRALI
Ga0184605_1040920523300018027Groundwater SedimentMPGVMGFYGWFDWARSRCRREKAQTMAEYAVVLGVIVPAILIAYGLLSDKVAALIDSVRALLS
Ga0184620_1032981623300018051Groundwater SedimentFFGWIDRIRSRCGHERAQTMAEYAVILGVITPAIIIAYGLLSGTIGSMLDSVSSLL
Ga0184621_1015297613300018054Groundwater SedimentMPGVMGFYGWFDWARSRCRREKAQTMAEYAVVLGVIVPAIVIAYTLLSDRVAALIDSVRSLLA
Ga0184619_1003212723300018061Groundwater SedimentMPRKMAPPGWFDRIRSRCRRETAQTMAEYAVVLAVITPAIIIAYALLSDRVASLLDSVRALI
Ga0184619_1003598633300018061Groundwater SedimentMPGNMAFHAWFDRFRSRCSREGAQTMAEYAITLAVITPAIIIAYGLFSDQIARLLDAVRAILS
Ga0184618_1000624733300018071Groundwater SedimentMARYGWFDRILSRWRRETAQTMAEYAVVLAVITPGIIIVLGLFSDDIGHLLDSVRALF
Ga0184618_1007854133300018071Groundwater SedimentMAFPGWLDRIRSRCRLEGAQTMAEYAVVLAVITPAIILAYGLFSGKIALLIDAVRDILS
Ga0184618_1011243013300018071Groundwater SedimentMAFSGWLDRIRSRCRPEGAQTMAEYAVVLGVIVPAIILSYGLFSDKIAQLIHSAVAILT
Ga0184609_1041658213300018076Groundwater SedimentWFDRIRSLCRRETAQTMAEYAVVLAVITPAIIIAYGLFSDQIAKLIDSVRSLL
Ga0066667_1017175713300018433Grasslands SoilMASSGWFERIRSHYRRESAQTMAEYAVILGVITPAIIIALTLLSDKVALLIDSVRALL
Ga0184642_100955223300019279Groundwater SedimentDGARADATDMPRPGWFDRILSRCRRETAQTMAEYAVVLAVITPGIIIVLGLFSDDIGRLLDSVRALF
Ga0137408_127970523300019789Vadose Zone SoilMARPGWFDRILSRCRRETAQTMAEYAVVLAVITPGIIIVLGLFSDDIGRLLDSVRALF
Ga0193700_100077493300019873SoilMPGKMAFYGWFEWLRSRCRREKAQTMAEYAVVLGVIVPAILIAYGLLSGKVAALIDSVRALLF
Ga0193700_100526243300019873SoilMPGKMAFYGWFEWVRSRCRREKAQTMAEYAVVLAVITPAIILAYSLLSDRVAFLIDAVRALL
Ga0193729_100002493300019887SoilMPRNMAPSGWFDRIRFRCRDENAQTMAEYAVILGVITPAIIIALGLLSGRVAQLLDSVRSLF
Ga0193731_107983623300020001SoilMPRPGWFDRILSRCRRETAQTMAEYAVVLAVITPGIIIVLGLFSDDIGHLLDSVRALF
Ga0210382_1003513313300021080Groundwater SedimentSRCRRETAQTMAEYAVVLAVITPGIIIVLGLFSDDIGHLLDSVRALF
Ga0193699_1035414023300021363SoilMPGVMGFYGWFDWARSRCRREKAQTMAEYAVVLGVIVPAILIAYGLLSDKVGTLIDSVRA
Ga0193695_101413323300021418SoilMARSGWFDRILSRCRRETAQTMAEYAVVLAVITPGIIIVLGLFSDDIGRLLDSVRALF
Ga0222623_1009397223300022694Groundwater SedimentMPGVMGFYGWFDWARSRCRREKGQTMAEYAVVLGVIVPAILIAYGLLSDKVAFLIDSVRALLS
Ga0207684_1009282143300025910Corn, Switchgrass And Miscanthus RhizosphereVDAVTPIPSDMAPSGWFDRIRPHRRREDAQTMAEYAVVLGVIVPAIVISYAAFSDDIARLIDSVRSIL
Ga0207646_1003524623300025922Corn, Switchgrass And Miscanthus RhizosphereVDALTPIPSDMAPSGWFDRIRPHRRREDAQTMAEYAVVLGVIVPAIVISYAAFSDDIARLIDSVRSIL
Ga0207686_1180003813300025934Miscanthus RhizosphereWARSRWRREKAQTMAEYAVVLAVITPAIILAYGLLSGKVGQLIDAVRALL
Ga0207651_1157315223300025960Switchgrass RhizosphereMAFQVWFDRIRCRCAHEKAQTMAEYAVVLAVITPAIVIAYGLFSGKIGTLLSNVASLL
Ga0207683_1162923023300026121Miscanthus RhizosphereMAFQVWFDRIRSRCAHEKAQTMSEYAVVLAVITPAIVIAYGLFSGKIGTLLSNVASLL
Ga0209159_108953613300026343SoilMPGVMGFYGWFDWASSRCRREKGQTMAEYAVVLGVIVPAIIIAYTLLSDRIAALIDSVRALIS
Ga0209378_108697613300026528SoilERIRSHYRRESAQTMAEYAVILGVITPAIIIALTLLSDKVALLIDSVRALL
Ga0209376_136005713300026540SoilMPGRMALYRWFDRTRSHCRGEKGQTMAEYAVVLGVIVPAILIAYGLLSDKVAALIDTVRGLLS
Ga0209180_1060462523300027846Vadose Zone SoilMPRDMASSGWFDRIRSYCRRENAQTMAEYAVILGVITPAIIIALGLLSGRVAQLLD
Ga0209283_1063422023300027875Vadose Zone SoilMTFFGWIDRIRSRCGHEGAQTMAEYAVILGVITPAIIIAYGLLSGTIGNMLNSVSSLL
Ga0209590_1018669723300027882Vadose Zone SoilMPRDMASSGWFDRIRSRSRPETAQTMAEYAVILGVITPAIIIALGLLSDRVAQLLDSVRSLF
Ga0209488_1118930913300027903Vadose Zone SoilDMASSGWFERIRSHCRRESAQTMAEYAVILGVITPAIIIALALLSDKVAMLIDSVRALL
Ga0307276_1000023693300028705SoilMPGVMGFYGSFDWARSRCRREKAQTMAEYAVVLGVIVPAILIAYGLLSDKVAFLIDSVRALLS
Ga0307303_1009138323300028713SoilMPGKMAFYGWFEWLRSRCRREKAQTMAEYAVVLAVITPAIILAYSLLSDRVAFLIDAVRALL
Ga0307313_1006657323300028715SoilMPRPGWFDRILSRCRRETAQTMAEYAVVLAVITPGIIIVLGLFSDDIGRLLDSVRALF
Ga0307307_1000614113300028718SoilMPGKMAFYGWFEWLRSRCRREKAQTMAEYAVVLGVIVPAILIAYGLLSGKVAALIDSV
Ga0307301_1011752013300028719SoilMAFAGWLDRIRSRWRPEGAQTMAEYGIVLAVITPAIILAYGLFSGKIGELIDSVRAILS
Ga0307317_1007573623300028720SoilMPGKMAFYGWFEWVRSRCRREKAQTMAEYAVVLAVITPAIILAYGLLSGKVGQLIDAVRALL
Ga0307315_1001900633300028721SoilMPGKMAFYGWFEWVRSRCRREKAQTMAEYAVVLGVIVPAILIAYGLLSGKVAALIDSVRALLF
Ga0307318_1029027013300028744SoilPQDEAYGTTGPAPMPGKMAFYGWFEWVRSRCRREKAQTMAEYAVVLGVIVPAILIAYGLLSDKVAFLIDSVRALLS
Ga0307280_1032769013300028768SoilMPRVMGFYGWFDWARSRCRREKGQTMAEYAVVLGVIVPAILIAYGLLSDKVAFLIDSVRALLS
Ga0307320_1032149223300028771SoilMPGVIGFYGWFDWARSRCRREKGQTMAEYAVVLGVIVPAILIAYGLLSDKVAFLIDSVRALLS
Ga0307282_1004003423300028784SoilMPRPGWFDRILSCCRRETAQTMAEYAVVLAVITPGIIIVLGLFSDDIGRLLDSVRALF
Ga0307282_1035353423300028784SoilRHMGPVTVRRWADMAFRGWIDRIRSRCCRSEAQTMAEYAVILGVITPAIVLAYVLFADEIAKLIDSVRGLL
Ga0307299_1040924223300028793SoilEAYGNTSAAPMPGVMGFYGWFDWARSRCRREKGQTMAEYAVVLGVIVPAILIAYGLLSDKVAFLIDSVRALLS
Ga0307503_1056142213300028802SoilMAFQVWFDRIRCRCAHEKAQTMAEYAVVLAVITPAIVIAYGLLSGKIGTLLSGVASLL
Ga0307503_1065844123300028802SoilMSRKMAFHGWFELIRSRCRREKAQTMAEYAVVLGVIVPAIILSYSLFSDKIAQLINAAVSILT
Ga0307281_1014963923300028803SoilMPGNMPFHGWFDRIRSRFTSEKAQTMAEYAVVLAVITPAIIIAYSLFADRIAQLLDSVRALLT
Ga0307305_1007752523300028807SoilMTFFGWIDRIRARCGHERAQTMAEYAVILGVITPAIIIAYGLLSGTIGSMLDSVSSLL
Ga0307310_1041420523300028824SoilPMPRVMGFYGWFDWARSRCRREKGQTMAEYAVVLGVIVPAILIAYGLLSDKVAFLIDSVRALLS
Ga0307312_1094881613300028828SoilTLRHMGPVTVRRWADMAFRGWIDRIRSRCCRSEAQTMAEYAVILGVITPAIVLAYVLFADEIAKLIDSVRGLL
Ga0307312_1117619613300028828SoilMAFYGWFDRIRSRCRREGAQTMAEYAITLAVITPAIIIAYGLFSDQIGRLIDSVRSVL
Ga0307289_1036168113300028875SoilRILSRCRRETAQTMAEYAVVLAVITPGIIIVLGLFSDDIGRLLDSVRALF
Ga0307278_1002271543300028878SoilMPGVMGFYGWFDWARSRYRREKAQTMAEYAVVLGVIVPAILIAYGLLSDKVAFLIDSVRALLS
Ga0307278_1032720313300028878SoilYGWFEWLRSRCRREKAQTMAEYAVVLGVIVPAILIAYGLLSGKVAALIDSVRALLF
Ga0307300_1028743323300028880SoilDPQDEAYGNPSAAPMPGVMGFYGWFDWARSRCRREKGQTMAEYAVVLGVIVPAILIAYGLLSDKVAFLIDSVRALLS
Ga0307277_1003935833300028881SoilMPGNMAFYRWFDRIRSRCSREGAQTMAEYAVTLAVITPAIIIAYGLFSDQIARMIDSVRSLL
Ga0307277_1004734623300028881SoilMPRPGWFDRILSRCRHETAQTMAEYAVVLAVITPGIIIVLGLFSDDIGRLLDSVRALF
Ga0307308_1014556223300028884SoilMAFYGWFDRIRSRCRREGAQTMAEYAITLAVITPAIIIAYGLFSDQIGRLIDSVRSIL
Ga0307501_1009491713300031152SoilMPGKMAFYGWFEWARSRWRREKAQTMAEYAVVLAVITPAIILAYGLLSGKVGQLIDAVRALL

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.