Metagenome / Metatranscriptome Family F057346

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F057346
Family Type	Metagenome / Metatranscriptome
Number of Sequences	136
Average Sequence Length	58 residues
Representative Sequence	MKKDQRIGNWTPEGEAERAASRRDYRELTPAQRVEQVFELSRFMSRVAEAGRRQRGA
Number of Associated Samples	116
Number of Associated Scaffolds	136

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	41.91 %
% of genes near scaffold ends (potentially truncated)	11.03 %
% of genes from short scaffolds (< 2000 bps)	54.41 %
Associated GOLD sequencing projects	100
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (90.441 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (16.912 % of family members)
Environment Ontology (ENVO)	Unclassified (35.294 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (40.441 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 49.41% β-sheet: 0.00% Coil/Unstructured: 50.59%
Feature Viewer

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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 136 Family Scaffolds
PF00067	p450	6.62
PF10609	ParA	3.68
PF06559	DCD	3.68
PF09970	DUF2204	2.94
PF01039	Carboxyl_trans	2.94
PF00440	TetR_N	2.21
PF02771	Acyl-CoA_dh_N	2.21
PF00528	BPD_transp_1	2.21
PF01618	MotA_ExbB	2.21
PF01872	RibD_C	2.21
PF02374	ArsA_ATPase	1.47
PF02470	MlaD	1.47
PF12637	TSCPD	1.47
PF02452	PemK_toxin	1.47
PF01553	Acyltransferase	1.47
PF03641	Lysine_decarbox	1.47
PF00662	Proton_antipo_N	0.74
PF08843	AbiEii	0.74
PF05000	RNA_pol_Rpb1_4	0.74
PF09678	Caa3_CtaG	0.74
PF00825	Ribonuclease_P	0.74
PF13561	adh_short_C2	0.74
PF16177	ACAS_N	0.74
PF08544	GHMP_kinases_C	0.74
PF13792	Obsolete Pfam Family	0.74
PF00107	ADH_zinc_N	0.74
PF01641	SelR	0.74
PF00535	Glycos_transf_2	0.74
PF02566	OsmC	0.74
PF02880	PGM_PMM_III	0.74
PF00392	GntR	0.74
PF01566	Nramp	0.74
PF02661	Fic	0.74
PF00589	Phage_integrase	0.74
PF02195	ParBc	0.74
PF00005	ABC_tran	0.74
PF01638	HxlR	0.74
PF01381	HTH_3	0.74
PF10111	Glyco_tranf_2_2	0.74
PF13641	Glyco_tranf_2_3	0.74
PF00296	Bac_luciferase	0.74
PF12681	Glyoxalase_2	0.74
PF10387	DUF2442	0.74
PF12840	HTH_20	0.74
PF12704	MacB_PCD	0.74
PF12838	Fer4_7	0.74
PF09594	GT87	0.74
PF07883	Cupin_2	0.74
PF03547	Mem_trans	0.74
PF07690	MFS_1	0.74
PF13544	Obsolete Pfam Family	0.74
PF04545	Sigma70_r4	0.74
PF02867	Ribonuc_red_lgC	0.74
PF00466	Ribosomal_L10	0.74
PF00702	Hydrolase	0.74

COG ID	Name	Functional Category	% Frequency in 136 Family Scaffolds
COG2124	Cytochrome P450	Defense mechanisms [V]	6.62
COG0717	dCTP deaminase	Nucleotide transport and metabolism [F]	3.68
COG0777	Acetyl-CoA carboxylase beta subunit	Lipid transport and metabolism [I]	2.94
COG0825	Acetyl-CoA carboxylase alpha subunit	Lipid transport and metabolism [I]	2.94
COG4799	Acetyl-CoA carboxylase, carboxyltransferase component	Lipid transport and metabolism [I]	2.94
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	2.21
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	2.21
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	2.21
COG1009	Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit	Energy production and conversion [C]	1.47
COG1611	Nucleotide monophosphate nucleosidase PpnN/YdgH, Lonely Guy (LOG) family	Nucleotide transport and metabolism [F]	1.47
COG2337	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	Defense mechanisms [V]	1.47
COG0033	Phosphoglucomutase/phosphomannomutase	Carbohydrate transport and metabolism [G]	0.74
COG0086	DNA-directed RNA polymerase, beta' subunit/160 kD subunit	Transcription [K]	0.74
COG0209	Ribonucleotide reductase alpha subunit	Nucleotide transport and metabolism [F]	0.74
COG0229	Peptide methionine sulfoxide reductase MsrB	Posttranslational modification, protein turnover, chaperones [O]	0.74
COG0244	Ribosomal protein L10	Translation, ribosomal structure and biogenesis [J]	0.74
COG0594	RNase P protein component	Translation, ribosomal structure and biogenesis [J]	0.74
COG0679	Predicted permease, AEC (auxin efflux carrier) family	General function prediction only [R]	0.74
COG1109	Phosphomannomutase	Carbohydrate transport and metabolism [G]	0.74
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.74
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	0.74
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	0.74
COG1914	Mn2+ or Fe2+ transporter, NRAMP family	Inorganic ion transport and metabolism [P]	0.74
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.74
COG2253	Predicted nucleotidyltransferase component of viral defense system	Defense mechanisms [V]	0.74

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	90.44 %
Unclassified	root	N/A	9.56 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	90.44 %
Unclassified	root	N/A	9.56 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	90.44 %
Unclassified	root	N/A	9.56 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	77.94 %
Unclassified	root	N/A	9.56 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.74 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	77.94 %
Unclassified	root	N/A	9.56 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.74 %

Name	Rank	Taxonomy	Distribution
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	41.91 %
Unclassified	root	N/A	9.56 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	7.35 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.74 %

Name	Rank	Taxonomy	Distribution
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	36.03 %
Unclassified	root	N/A	9.56 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	5.88 %
Thermoleophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales	0.74 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.74 %

Name	Rank	Taxonomy	Distribution
unclassified Solirubrobacterales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales	13.97 %
Unclassified	root	N/A	9.56 %
Conexibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae	6.62 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5.88 %
Thermoleophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae	0.74 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	0.74 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.74 %

Name	Rank	Taxonomy	Distribution
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	13.97 %
Unclassified	root	N/A	9.56 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	6.62 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5.88 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples	0.74 %
Thermoleophilum	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → Thermoleophilum	0.74 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.74 %

Name	Rank	Taxonomy	Distribution
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	13.97 %
Unclassified	root	N/A	9.56 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	6.62 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5.88 %
uncultured Solirubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	0.74 %
Thermoleophilum album	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → Thermoleophilum → Thermoleophilum album	0.74 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.74 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908032\|Perma_A_C_ConsensusfromContig34802	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	611	Open in IMG/M
2124908044\|A5_c1_ConsensusfromContig52409	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	805	Open in IMG/M
3300000317\|WSSedL2TaDRAFT_1013685	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	821	Open in IMG/M
3300001161\|JGI12135J13285_100129	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	4998	Open in IMG/M
3300001333\|A21PFW6_1036512	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1117	Open in IMG/M
3300001977\|JGI24746J21847_1000326	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	6837	Open in IMG/M
3300002074\|JGI24748J21848_1002469	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2085	Open in IMG/M
3300002568\|C688J35102_120269061	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	959	Open in IMG/M
3300002568\|C688J35102_120322938	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	990	Open in IMG/M
3300002568\|C688J35102_120445885	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1075	Open in IMG/M
3300002568\|C688J35102_120960237	All Organisms → cellular organisms → Bacteria	3196	Open in IMG/M
3300003659\|JGI25404J52841_10004517	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2826	Open in IMG/M
3300003987\|Ga0055471_10025762	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	1456	Open in IMG/M
3300003992\|Ga0055470_10000261	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5080	Open in IMG/M
3300003992\|Ga0055470_10016073	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1318	Open in IMG/M
3300004001\|Ga0055450_10000428	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	9141	Open in IMG/M
3300004001\|Ga0055450_10005546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3650	Open in IMG/M
3300004055\|Ga0055480_10222620	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	763	Open in IMG/M
3300004061\|Ga0055487_10000037	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	11760	Open in IMG/M
3300004081\|Ga0063454_100735118	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300004114\|Ga0062593_100757629	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	958	Open in IMG/M
3300005162\|Ga0066814_10042064	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	725	Open in IMG/M
3300005168\|Ga0066809_10037599	All Organisms → cellular organisms → Bacteria	1047	Open in IMG/M
3300005327\|Ga0070658_10027980	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4525	Open in IMG/M
3300005327\|Ga0070658_10072421	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2824	Open in IMG/M
3300005335\|Ga0070666_10002120	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	12060	Open in IMG/M
3300005340\|Ga0070689_100105996	All Organisms → cellular organisms → Bacteria	2230	Open in IMG/M
3300005341\|Ga0070691_10000011	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	57498	Open in IMG/M
3300005341\|Ga0070691_10001422	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	10226	Open in IMG/M
3300005347\|Ga0070668_100061418	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	2911	Open in IMG/M
3300005354\|Ga0070675_100000015	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	201080	Open in IMG/M
3300005364\|Ga0070673_100008553	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	6810	Open in IMG/M
3300005439\|Ga0070711_101571549	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	575	Open in IMG/M
3300005444\|Ga0070694_100198524	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	1494	Open in IMG/M
3300005455\|Ga0070663_100000101	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	39196	Open in IMG/M
3300005455\|Ga0070663_101392263	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300005456\|Ga0070678_100026439	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	3923	Open in IMG/M
3300005459\|Ga0068867_100000823	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	20883	Open in IMG/M
3300005526\|Ga0073909_10271260	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → Thermoleophilum → Thermoleophilum album	761	Open in IMG/M
3300005530\|Ga0070679_101147904	Not Available	722	Open in IMG/M
3300005539\|Ga0068853_100853621	Not Available	873	Open in IMG/M
3300005539\|Ga0068853_102113042	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	546	Open in IMG/M
3300005543\|Ga0070672_100000007	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	104699	Open in IMG/M
3300005548\|Ga0070665_100878208	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	909	Open in IMG/M
3300005719\|Ga0068861_100711120	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	934	Open in IMG/M
3300006576\|Ga0074047_11864830	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	956	Open in IMG/M
3300006578\|Ga0074059_12097594	Not Available	992	Open in IMG/M
3300006580\|Ga0074049_11847446	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	541	Open in IMG/M
3300006581\|Ga0074048_13453622	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1585	Open in IMG/M
3300006606\|Ga0074062_12937261	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2541	Open in IMG/M
3300006642\|Ga0075521_10219648	All Organisms → cellular organisms → Bacteria	905	Open in IMG/M
3300006806\|Ga0079220_11995938	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	517	Open in IMG/M
3300006854\|Ga0075425_100130803	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2869	Open in IMG/M
3300009551\|Ga0105238_10000051	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	141705	Open in IMG/M
3300009789\|Ga0126307_10102122	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2273	Open in IMG/M
3300009840\|Ga0126313_10167630	Not Available	1670	Open in IMG/M
3300010038\|Ga0126315_10152880	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1367	Open in IMG/M
3300010166\|Ga0126306_10206555	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1485	Open in IMG/M
3300010400\|Ga0134122_10519490	All Organisms → cellular organisms → Bacteria	1082	Open in IMG/M
3300010400\|Ga0134122_13125706	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	518	Open in IMG/M
3300010401\|Ga0134121_10000161	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	78532	Open in IMG/M
3300010403\|Ga0134123_10328674	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1370	Open in IMG/M
3300011418\|Ga0153954_1135682	Not Available	612	Open in IMG/M
3300012005\|Ga0120161_1061350	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1019	Open in IMG/M
3300012212\|Ga0150985_111147226	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1180	Open in IMG/M
3300012469\|Ga0150984_106876841	Not Available	2038	Open in IMG/M
3300012900\|Ga0157292_10000019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	60573	Open in IMG/M
3300012924\|Ga0137413_11226397	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	599	Open in IMG/M
3300012939\|Ga0162650_100000071	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	9202	Open in IMG/M
3300012943\|Ga0164241_10012774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6961	Open in IMG/M
3300012955\|Ga0164298_10782538	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	680	Open in IMG/M
3300012960\|Ga0164301_10000350	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	13232	Open in IMG/M
3300012989\|Ga0164305_10006940	All Organisms → cellular organisms → Bacteria	5218	Open in IMG/M
3300013102\|Ga0157371_10031329	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3831	Open in IMG/M
3300013308\|Ga0157375_12726484	Not Available	591	Open in IMG/M
3300013308\|Ga0157375_13545448	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	519	Open in IMG/M
3300014265\|Ga0075314_1001499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4247	Open in IMG/M
3300014487\|Ga0182000_10014340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1995	Open in IMG/M
3300014487\|Ga0182000_10203025	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	761	Open in IMG/M
3300014969\|Ga0157376_10030326	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4318	Open in IMG/M
3300015371\|Ga0132258_12647917	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1252	Open in IMG/M
3300018071\|Ga0184618_10003094	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	4369	Open in IMG/M
3300018422\|Ga0190265_10654957	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1171	Open in IMG/M
3300018429\|Ga0190272_10011953	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4297	Open in IMG/M
3300018429\|Ga0190272_10096675	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1884	Open in IMG/M
3300018429\|Ga0190272_10457085	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1067	Open in IMG/M
3300018465\|Ga0190269_10216947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1050	Open in IMG/M
3300018476\|Ga0190274_10000270	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	33333	Open in IMG/M
3300018476\|Ga0190274_13066543	Not Available	561	Open in IMG/M
3300021363\|Ga0193699_10162174	Not Available	922	Open in IMG/M
3300021363\|Ga0193699_10443164	Not Available	535	Open in IMG/M
3300021363\|Ga0193699_10445855	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	533	Open in IMG/M
3300021415\|Ga0193694_1001422	All Organisms → cellular organisms → Bacteria	3442	Open in IMG/M
3300021418\|Ga0193695_1000137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	11100	Open in IMG/M
3300023070\|Ga0247755_1000001	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	299511	Open in IMG/M
3300023260\|Ga0247798_1007390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1283	Open in IMG/M
3300024426\|Ga0196960_10005523	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	3192	Open in IMG/M
3300025537\|Ga0210061_1055801	All Organisms → cellular organisms → Bacteria	673	Open in IMG/M
3300025780\|Ga0210100_1000094	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	18297	Open in IMG/M
3300025780\|Ga0210100_1001197	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	2554	Open in IMG/M
3300025814\|Ga0210101_1020441	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1816	Open in IMG/M
3300025903\|Ga0207680_10002069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	9404	Open in IMG/M
3300025909\|Ga0207705_10060891	All Organisms → cellular organisms → Bacteria	2727	Open in IMG/M
3300025913\|Ga0207695_10569210	All Organisms → cellular organisms → Bacteria	1014	Open in IMG/M
3300025916\|Ga0207663_10638247	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	840	Open in IMG/M
3300025921\|Ga0207652_10000303	All Organisms → cellular organisms → Bacteria	50549	Open in IMG/M
3300025924\|Ga0207694_10000035	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	195870	Open in IMG/M
3300025926\|Ga0207659_11425588	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	593	Open in IMG/M
3300025960\|Ga0207651_10002791	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	8391	Open in IMG/M
3300026045\|Ga0208535_1004555	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1412	Open in IMG/M
3300026089\|Ga0207648_10001794	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	23519	Open in IMG/M
3300026121\|Ga0207683_10045991	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3818	Open in IMG/M
3300027067\|Ga0208602_1000206	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	5705	Open in IMG/M
3300027524\|Ga0208998_1000024	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	49084	Open in IMG/M
3300027574\|Ga0208982_1010578	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	1830	Open in IMG/M
3300027636\|Ga0214469_1024902	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1980	Open in IMG/M
3300027636\|Ga0214469_1035540	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1603	Open in IMG/M
3300027817\|Ga0209112_10024459	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1763	Open in IMG/M
3300028379\|Ga0268266_10012631	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	7298	Open in IMG/M
3300028380\|Ga0268265_10389232	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1285	Open in IMG/M
3300028654\|Ga0265322_10000001	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	543854	Open in IMG/M
3300028719\|Ga0307301_10133929	Not Available	794	Open in IMG/M
3300028722\|Ga0307319_10000010	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	98974	Open in IMG/M
3300028778\|Ga0307288_10000005	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	203287	Open in IMG/M
3300028786\|Ga0307517_10663655	Not Available	506	Open in IMG/M
3300028790\|Ga0307283_10005389	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2240	Open in IMG/M
3300030510\|Ga0268243_1009008	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1817	Open in IMG/M
3300030619\|Ga0268386_10163825	All Organisms → cellular organisms → Bacteria	1687	Open in IMG/M
3300031228\|Ga0299914_10001991	All Organisms → cellular organisms → Bacteria	13850	Open in IMG/M
3300031228\|Ga0299914_10018341	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	5609	Open in IMG/M
3300031366\|Ga0307506_10333548	Not Available	603	Open in IMG/M
3300031858\|Ga0310892_10493466	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	814	Open in IMG/M
3300031938\|Ga0308175_101295462	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	811	Open in IMG/M
3300032126\|Ga0307415_100038529	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3151	Open in IMG/M
3300032133\|Ga0316583_10224417	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	651	Open in IMG/M
3300034131\|Ga0334911_003831	All Organisms → cellular organisms → Bacteria	1935	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	69.12%
Host-Associated	Host-Associated	30.88%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	59.56%
Plants	Host-Associated → Plants	30.15%
Aquatic	Environmental → Aquatic	9.56%
Fungi	Host-Associated → Fungi	0.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	58.09%
Rhizosphere	Host-Associated → Plants → Rhizosphere	19.85%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.56%
Marine	Environmental → Aquatic → Marine	8.82%
Sediment	Environmental → Aquatic → Sediment	0.74%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.74%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.74%
Roots	Host-Associated → Plants → Roots	0.74%
Mycelium	Host-Associated → Fungi → Mycelium	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	42.65%
Loam	Environmental → Terrestrial → Soil → Loam	13.24%
Soil	Host-Associated → Plants → Rhizosphere → Soil	12.50%
Wetlands	Environmental → Aquatic → Marine → Wetlands	8.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.35%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.62%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.47%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.47%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.47%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.74%
Sand	Environmental → Terrestrial → Soil → Sand	0.74%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.74%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.74%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.74%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	31.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	12.50%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	8.09%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.35%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.62%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.88%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	3.68%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	3.68%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.68%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	2.94%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.21%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.47%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.47%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.47%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.47%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.74%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.74%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	0.74%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.74%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.74%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.74%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.74%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	16.91%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	8.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.35%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	5.15%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	3.68%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.68%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.68%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.94%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	2.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.21%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.21%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.21%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	1.47%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	1.47%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.47%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.47%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.47%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.47%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.47%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.47%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.47%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.47%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.47%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	0.74%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.74%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.74%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.74%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.74%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	0.74%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.74%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.74%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.74%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.74%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.74%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.74%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.74%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	0.74%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.74%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.74%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.74%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.74%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908032	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Perma_all	Environmental	Open in IMG/M
2124908044	Soil microbial communities from permafrost in Bonanza Creek, Alaska, sample from Active Layer A5	Environmental	Open in IMG/M
3300000317	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Feb2011 Site L2 Tule	Environmental	Open in IMG/M
3300001161	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M2	Environmental	Open in IMG/M
3300001333	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A21-PF)- 6 month illumina	Environmental	Open in IMG/M
3300001977	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5	Host-Associated	Open in IMG/M
3300002074	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S1	Host-Associated	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003659	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300003987	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2	Environmental	Open in IMG/M
3300003992	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D1	Environmental	Open in IMG/M
3300004001	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Galinas_PWC_D1	Environmental	Open in IMG/M
3300004055	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Muzzi_PWB_D2	Environmental	Open in IMG/M
3300004061	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqC_D2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300005162	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300006576	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006578	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006580	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011418	Attine ant fungus gardens microbial communities from Florida, USA - TSFL038 MetaG	Host-Associated	Open in IMG/M
3300012005	Permafrost microbial communities from Nunavut, Canada - A15_80cm_0M	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012900	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S179-409R-1	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012939	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t1i015	Environmental	Open in IMG/M
3300012943	Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014265	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailC_D2	Environmental	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300021363	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2	Environmental	Open in IMG/M
3300021415	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s1	Environmental	Open in IMG/M
3300021418	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s2	Environmental	Open in IMG/M
3300023070	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L096-311B-4	Environmental	Open in IMG/M
3300023260	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S197-509C-6	Environmental	Open in IMG/M
3300024426	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_5	Environmental	Open in IMG/M
3300025537	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D1 (SPAdes)	Environmental	Open in IMG/M
3300025780	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D1 (SPAdes)	Environmental	Open in IMG/M
3300025814	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Muzzi_PWC_D1 (SPAdes)	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026045	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailC_D2 (SPAdes)	Environmental	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027067	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF007 (SPAdes)	Environmental	Open in IMG/M
3300027524	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027574	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_O3 (SPAdes)	Environmental	Open in IMG/M
3300027636	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57 HiSeq	Environmental	Open in IMG/M
3300027817	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028654	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG	Host-Associated	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028786	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM	Host-Associated	Open in IMG/M
3300028790	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_122	Environmental	Open in IMG/M
3300030510	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG (v2)	Environmental	Open in IMG/M
3300030619	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (Novaseq)	Environmental	Open in IMG/M
3300031228	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57	Environmental	Open in IMG/M
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032133	Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA	Host-Associated	Open in IMG/M
3300034131	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 7HMS	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Perma_A_C_03449120	2124908032	Soil	YRLGVSSTKRIGNWTPDGKVERARLRRDYLELSGGERMKQVFELSRFMSRVAAAGRRARG
A5_c1_00651820	2124908044	Soil	MDVKSTKRAGNWTPEGKAERAALRRDYTDLTPAQRTAQVFELSRFMSQVAESGRRRRSA
WSSedL2TaDRAFT_10136851	3300000317	Wetland	LYRLRVATKRPTGNWTPEGKAESAALRRDYLELTPAQRMEQVFELSRFMSRVAEAGRRQRSG*
JGI12135J13285_1001296	3300001161	Forest Soil	MAAVERVGNWTPEGKAEVAALRRDYRELTPAQRAEQVFELSKFLSQVAEAGRQKRLG*
A21PFW6_10365122	3300001333	Permafrost	MLVKPAKRAGNWTPEGKAERVALRRDYAELTPAQRTEQVFELSRFMSRVAESGHRQRSA*
JGI24746J21847_10003264	3300001977	Corn, Switchgrass And Miscanthus Rhizosphere	MGRKLSGNWTPEEKAERAALRRDYRELTPEQRMTQVFQLSRFMSRVADAGRRQRGA*
JGI24748J21848_10024692	3300002074	Corn, Switchgrass And Miscanthus Rhizosphere	MVTGRKRIGNWSPDGEAERARLRRDYLELDPAQRMKQVCDLSRFMSRVADAGRRQRGA*
C688J35102_1202690612	3300002568	Soil	MGGVKKPPRAGNWTPEGIAEKAAARRDFHGLTPAQRVEQVFELSRFMSWVAEAGRRRRGA
C688J35102_1203229382	3300002568	Soil	MADKRKGNWTPEGRAERAALRRDYRELTPAQRAEQVFELSKFMSQVADSGRRRRLA*
C688J35102_1204458852	3300002568	Soil	MGGVKKPPRAGNWTPEGIAEKAAARRDFHELTPAQRVEQVFELSRFMSRVAEAGRRQRGA
C688J35102_1209602373	3300002568	Soil	LPVDAEKRKGNWTPDGRAERAAARRDYRELSAAQRAEQVFELSRFMSQVEQTGRRRRLA*
JGI25404J52841_100045175	3300003659	Tabebuia Heterophylla Rhizosphere	LDAMNSRRKGNWTLEGRAERAALKRDFRDLTPAQRVEQVFELSKFMSQVSQAGQRQRGD*
Ga0055471_100257623	3300003987	Natural And Restored Wetlands	MDSPKRIGNWTPEGKAERAALRRDYTELTPAQRTKQVFELSRFMTRMAESGHRQRGA*
Ga0055470_100002612	3300003992	Natural And Restored Wetlands	MECPHRTGNWTPDGKAKRAALRRDYLELTPAQRVEQVVKLSKFMSRVSEAGRRQRGEG*
Ga0055470_100160733	3300003992	Natural And Restored Wetlands	MKPRKRTGNWTPEGIAERVALRRDYTELTPSQRVEQVFELSRVISQVAEAGRRQRGV*
Ga0055450_100004287	3300004001	Natural And Restored Wetlands	MAAGRTRVGNWTPHGEVERARLRRDYLELEPAQRMKQVCELSRFMSRVAEAGRRSRGA*
Ga0055450_100055464	3300004001	Natural And Restored Wetlands	VDPVRPTGNWTPDGKAERAALRRDYLELTPARRMKQVFELSKFMSRVSEAGQRQRGA*
Ga0055480_102226202	3300004055	Natural And Restored Wetlands	MEAQGKRVGNWTPDGEVERARLRRDYLELAPAQRMKQVCDLSRFMSRVAEAGRRHRGA*
Ga0055487_100000372	3300004061	Natural And Restored Wetlands	MGVESKKPTGNWTPDGQVERAILRREYKELTPAQRVEDVFELSRVLSQLAESGRRQRGG*
Ga0063454_1007351181	3300004081	Soil	SYDSVTGGGCTVLPVDAEKRKGNWTPDGRAERAAARRDYRELSAAQRAEQVFELSRFMSQVEQTGRRRRLA*
Ga0062593_1007576292	3300004114	Soil	VYRFDVKPTKPTGNWSPDGRAELAALRRDYLELTPEQRVAQVFELSRFMSRVAEAGRRQRGA*
Ga0066814_100420641	3300005162	Soil	VKAKKRTGNWTPDGAMERAALRRDYTELTPAERVEQVFELSRVLSQLAEVGRRQRTA*
Ga0066809_100375991	3300005168	Soil	MHVKPAKRSGNWTPDGKPERAALRRDYIELTPAQRTEQVFELSRFMSQVAESGHRRRSA*
Ga0070658_100279803	3300005327	Corn Rhizosphere	MATGGKRIGNWSPDGEAERARLRRDYLELAPAERMKQVCELSRFMSRMAEAGRRQRGSTK
Ga0070658_100724212	3300005327	Corn Rhizosphere	VKSRKRTGNWTPEGKAELAALRRDYTDLTPAQRTEQVFELSRFMSQLAEAGRRQRRG*
Ga0070666_100021204	3300005335	Switchgrass Rhizosphere	MADMAARPSRIGNWTPDGETEGARLRRDYLELEPTQRMKQVFELSRFMSKMAAAGRRQRGA*
Ga0070689_1001059963	3300005340	Switchgrass Rhizosphere	MYLFGMERPKRTGNWTPDEKAERAALRRDFVELTPSQRAEQVIELSRFMSRIAEAGRRQRSV*
Ga0070691_1000001120	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MKPAKRTGNWTPEGRAERAALQRDYTSLTPAQRLEQVFELSRFMSRVAESGQRQRGA*
Ga0070691_100014224	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MVRRPLYRLDVKPSKLTGNWTPEGKAEQAALRRDYLELTPAQRMMQVFELSRFMSQVSEAGRRQRGA*
Ga0070668_1000614183	3300005347	Switchgrass Rhizosphere	VNKRTGNWSPDGKAERAALRRDFRELTPAQRAEQVFELSRVMSQLAQAGRRKRSA*
Ga0070675_10000001579	3300005354	Miscanthus Rhizosphere	VKKGERIGNWSPDGKAERAALRRDYRELTPAQRAEQVFELSRFMSRVAEAGRRRGIA*
Ga0070673_1000085537	3300005364	Switchgrass Rhizosphere	MYLFCMERPKRTGNWTPDEKAEHAALRRDYVELTPSQRAEQVIELSRFMSRVAEAGRRQRGA*
Ga0070711_1015715492	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	PDGEAERAAARRDFRELTPAQRAEQAIELSRVLTRLAETGRRRRLG*
Ga0070694_1001985241	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	VKRPKPTGNWSPDGEADRAALRRDYTELTPAQRVAQVFELSRFMSRVADAGRKRSA*
Ga0070663_10000010132	3300005455	Corn Rhizosphere	MVQTPQRVGNWRPDGEVERARLRRDYIELDPARRLKQVCDLSRFMSRVAEAGRARRGA*
Ga0070663_1013922632	3300005455	Corn Rhizosphere	MTQMPQRVGNWRPDGEVERARLRRDYIELGPAERIKQVCELSRFMSRVAEAGRARRGA*
Ga0070678_1000264393	3300005456	Miscanthus Rhizosphere	VARKALYGGAVKRAQRTGNWTSDGKAERAALRRDYTDLTPAQRVAQVFELSRFMSRVAEAGHRKRSA*
Ga0068867_10000082316	3300005459	Miscanthus Rhizosphere	MSMYGGFVKRAKRAGNWTPDGKAERAALRRDYTDLTPAQRMAQVFELSRFMSRVAEAGHRKRSA*
Ga0073909_102712601	3300005526	Surface Soil	VERPKRIGNWTSDGRAERAALRREYKELTPAQRVEQVFELSRVLSQLAESGRRQRSA*
Ga0070679_1011479041	3300005530	Corn Rhizosphere	MPRRVGNWRPDGEVERARLRRDYIDLDPAQRMKQVCELSRFMSRVAEAGRARHGA*
Ga0068853_1008536212	3300005539	Corn Rhizosphere	MGVKEPARRGNWSPDGSAEKASQRRDFKELTPAQRVEQVCELSRFMSQVAEAGRRTRGA*
Ga0068853_1021130422	3300005539	Corn Rhizosphere	MKEAAKTGNWTPWGTAEKAAARRDFRELTPAQRVEQVFELSRFMSRVAEAGRRHRGV*
Ga0070672_100000007116	3300005543	Miscanthus Rhizosphere	VGIGSPYLDGYDLPVKKEGRIGNWSPDGKAERAAARRDIRELTPAQRAEQVFELSRFMSRVAEAGRRRRLG*
Ga0070665_1008782082	3300005548	Switchgrass Rhizosphere	MATGGKRIGNWSPDGEAERARLRRDYLELAPAERMKQVCELSRFMSRVAEAGRRQRGA*
Ga0068861_1007111202	3300005719	Switchgrass Rhizosphere	VRETKQIGNWTPDRKAERAALRRDYRELAPAQRAEQVFELSRFMSQLAEAGRRRRIG*
Ga0074047_118648302	3300006576	Soil	MYLCVMERPKRTGNWTPDGKAERAALRREYKELTPAQRMEQVFELSRFMSQVAEAGHRQRSA*
Ga0074059_120975941	3300006578	Soil	MKPTRKGNWTPDGRAERAALRREYEELTPAQRVEQVFELSKFMAGVADAGRR
Ga0074049_118474462	3300006580	Soil	FPDVASPQKRAGNWNPDGRVEQARLRRDYLESEPAQRIKQVCELSRFMSRVAAAGSSQRRG*
Ga0074048_134536221	3300006581	Soil	MYLCVMERPKRTGNWTPDGKAERAALRREYKELTPAQRMEQVFELSRFMSQVAEAGHRQ
Ga0074062_129372612	3300006606	Soil	MKPTRKGNWTPDGRAERAALRREYEELTPAQRVEQVFELSKFMAGVADAGRRQRLG*
Ga0075521_102196482	3300006642	Arctic Peat Soil	MTVAKKTGNWTPEGRAERAALRRDFQELTPAQRAEQVFELSRFMSQVADTGRRRRLA*
Ga0079220_119959382	3300006806	Agricultural Soil	MATVKKAARPGNWTPDGTVERASLRRDFRALTPAQRVEQVFELSRFMSQVAEAGRRRRSA
Ga0075425_1001308034	3300006854	Populus Rhizosphere	VKPAIRKGNWTPDGRADRASLRRDYLELTPAQRVEQVFELSKFMAEVADAGRRKRVA*
Ga0105238_1000005195	3300009551	Corn Rhizosphere	MSVKSVKRTGNWTPDGIAEVAALRRDYVELTPSQRVGQVFELSRFMSQLAEAGRRQRSA*
Ga0126307_101021224	3300009789	Serpentine Soil	MKKGQATGNWSPDGKAERAALRRDFRELTPAQRAEQVMELSRFMSHVAEAGRRRRIV*
Ga0126313_101676302	3300009840	Serpentine Soil	MAAVERAGNWTPEGKAEVAALRRDYRELTPAQRAEQVFELSKFLSQVAEAGRQKRLG*
Ga0126315_101528804	3300010038	Serpentine Soil	VKDGERIGNWSPDGKAERAALQRDYRELTPAQRVEQVFELSRFMSRVAEAGRRRRLA*
Ga0126306_102065554	3300010166	Serpentine Soil	GNWTPDGKAERAAARRDFRELTPAQRAEQVFELSRVVSQLAEAGRRQRSA*
Ga0134122_105194902	3300010400	Terrestrial Soil	MDRPKRTGNWTPDEKAERVALRRDYVELTPSQRAEQVIELSRFMSRVAEAGRRQRGA*
Ga0134122_131257062	3300010400	Terrestrial Soil	MFSMPRKRVGNWSPDGEGERARLRRDYLELAPAQRMKQVCDLSRFMSRVAKAGRRQRSV*
Ga0134121_1000016164	3300010401	Terrestrial Soil	VARKALYGGAVKPAKLAGNWTPDGKAERAALRRDYTGLTPAQRMAQVFELSRFMSRVAEAGHRKRSA*
Ga0134123_103286742	3300010403	Terrestrial Soil	VKREQRAGNWTPDGKVERAALRRDYTELSPAQRVAQVFELSRFMSRVAEAGHRKRSA*
Ga0153954_11356821	3300011418	Attine Ant Fungus Gardens	MNETKRIGNWRPNRQVERAIARREFRELSGAQRAEQVIELSRFMSQVAEAGRRQRLGEAGRFLVR*
Ga0120161_10613502	3300012005	Permafrost	MGVKSTKRTGNWTPEGKAERVALRRDYTDLTPAQRTEQVFELSRFMSQLAESGRRRRGA*
Ga0150985_1111472262	3300012212	Avena Fatua Rhizosphere	MTDKRERIGNWSPDGAAERARLRRDYLELAPAQRMKQVCELSRFMSRVAEAGRRQRGA*
Ga0150984_1068768411	3300012469	Avena Fatua Rhizosphere	KRKGNWTPDGRAERAAAQRDYRGLSGAQRAEQVFELSRFMSQVEQSGRRRRLG*
Ga0157292_1000001947	3300012900	Soil	MAAAVRKGNWSPDGKAERAALRRDYRELTPAQRAEQVFELSKFMSQVADAGRRQRLA*
Ga0137413_112263972	3300012924	Vadose Zone Soil	LYGDAVKPAKRSGNWTPDGKPERAALRRDYTELTPAQRTEQVFELSRFMSRVAESGHRRRSA*
Ga0162650_1000000717	3300012939	Soil	MAARRERIGNWSPDGEAERARLRRDYLELAPAQRMKQVCELSRFMSRVAEAGRRQRGA*
Ga0164241_100127742	3300012943	Soil	MGETKRIGNWRPDRQAERAIARREFRELSGAQRVEQVFELSRFMSQVAQAGQRRRLG*
Ga0164298_107825381	3300012955	Soil	VESLAMATGGKRIGNWSPDGEAERARLRRDYLELGPAQRMKQVCELSRFMSRMAEAGRRQRGA*
Ga0164301_100003503	3300012960	Soil	VKSTKRTGNWTPDGKAELAALRRDYTDLTPAQRTEQVFELSRFMSQLAEAGRRQRRG*
Ga0164305_100069405	3300012989	Soil	MRGKKRSGNWTPDGKAELAALRRAFQELTPAQRVEQVFELSRFMSRMAEAGRRQRSG*
Ga0157371_100313293	3300013102	Corn Rhizosphere	MAVRRERIGNWSPDGKAERARLRRDYLKLAPAERIKQVCELSRFMSRVAEAGRRQRSA*
Ga0157375_127264842	3300013308	Miscanthus Rhizosphere	MATVKRTGNWSLEGKAERAALRRDYQELTPAQRAEQVFELSKFMSQVADAGRRRRLG*
Ga0157375_135454482	3300013308	Miscanthus Rhizosphere	VKSRKRTGNWTPDGKAELAALRRDYTDLTPAQRTEQVFELSRFMSQLAEAGRRQRRG*
Ga0075314_10014997	3300014265	Natural And Restored Wetlands	MGAASGKRIGNWSPDGEAERARLRRDYLELSPAQRMKQVCDLSRFMSRVAEAGRRQRGA*
Ga0182000_100143403	3300014487	Soil	VKDGERIGNWSPDGKAERAALRRDYRELTPAQRVEQVFELSRFMSRVAEAGRRRTAFRG*
Ga0182000_102030253	3300014487	Soil	VKKVERIGNWSPDGKAERAALRRDYRELTPAQRAEQVFELSRFMSRVAEAGRRRGIA*
Ga0157376_100303266	3300014969	Miscanthus Rhizosphere	MKKGQRIGNWTPEGEAERAVSRRDYRELTPAQRVEQVFELSRFMSRVAEAGRRQRGA*
Ga0132258_126479174	3300015371	Arabidopsis Rhizosphere	VKPAKRVGNWTPDGKAERAALRRDYTELTPAERTKQVFELSRFMSRVAESGHRRRSA*
Ga0184618_100030945	3300018071	Groundwater Sediment	VYRKPVKSVKRSGNWTPEGKAERAALRRDYQNLTPAQRTEQVFELSKIMAHVAEAGRRQRSA
Ga0190265_106549573	3300018422	Soil	MAAGRKRIGNWTPDGEAERSRLRRDYLELEPAQRMKQVCELSRFMSRV
Ga0190272_100119535	3300018429	Soil	MKRTGNWSADGQVERAALRRDFLELTPAQRAEQVFELSRFMAQVAAAGRRRRGG
Ga0190272_100966753	3300018429	Soil	MGAKRTGNWTPEGKAEHAALRRDYLELTPAQRMTQVFELSRFMSRVSEAGRRQRGA
Ga0190272_104570853	3300018429	Soil	VKPTKLTGNWTPDGKAERAALRRDYLELTPAQRMKEVFELSRFMSRVSEAGRRQRGA
Ga0190269_102169472	3300018465	Soil	MKSQKTGNWTPEGRAERAALRRDFRELTPAQRAEQAMELSRFMSHVAEAGRRRRRA
Ga0190274_100002703	3300018476	Soil	VKPARKGNWTADGRADRAALRRDYLDLTPAQRVEQVFELSKFMAEVADAGRRKRR
Ga0190274_130665432	3300018476	Soil	MKAAKATGNWTPDGKAERAALRRDFRELTPAERTEQVFELSRFMAQVAESGRRRRGG
Ga0193699_101621742	3300021363	Soil	VKPAIRNGNWTPDGRAERAALRRDYLELTPAQRVEQVFELSRFMAEVADAGRRRRVA
Ga0193699_104431641	3300021363	Soil	MAAVKRTGNWTPEGKAERAALRRDYQELTPAQRAEQVFELSKFMSQVADAGRRRRLG
Ga0193699_104458552	3300021363	Soil	VATKPKRIGNWTPDGKAERARLRRDFLELTGSQRMKQVFELSRFMSRVAEAGHRARGG
Ga0193694_10014221	3300021415	Soil	KRNGNWTPEGKAEQAALRRDYLELTPAQRAEQVFELSKFMSQVAESGRRRRLG
Ga0193695_100013711	3300021418	Soil	MAMKTTKRVGNWTPDGKAEHAALRRDYTELTPAERTQQVFELSRFMSRVAESGSRQRGA
Ga0247755_1000001105	3300023070	Plant Litter	MATRRERIGNWSPDGEAERARLRRDYLELTPAQRMKQVCELSRFMSRVAEAGRRQRGA
Ga0247798_10073903	3300023260	Soil	MPQRHLGPMKKDRRIGNWTPEGEAERTASRRDYRELTPAQRVEQVFELSRLMSRVAEAGRRQRGA
Ga0196960_100055234	3300024426	Soil	VKDRRKGNWTPDGKAERAALRRNFRELTPAQRAEEVFELSRFMSQVSQAGHRRRSG
Ga0210061_10558012	3300025537	Natural And Restored Wetlands	MDSPKRIGNWTPEGKAERAALRRDYTELTPAQRTKQVFELSRFMTRMAESGHRQRGA
Ga0210100_10000943	3300025780	Natural And Restored Wetlands	MKPRKRTGNWTPEGIAERVALRRDYTELTPSQRVEQVFELSRVISQVAEAGRRQRGV
Ga0210100_10011972	3300025780	Natural And Restored Wetlands	MECPHRTGNWTPDGKAKRAALRRDYLELTPAQRVEQVVKLSKFMSRVSEAGRRQRGEG
Ga0210101_10204413	3300025814	Natural And Restored Wetlands	MEAQGKRVGNWTPDGEVERARLRRDYLELAPAQRMKQVCDLSRFMSRVAEAGRRHRGA
Ga0207680_100020695	3300025903	Switchgrass Rhizosphere	MADMAARPSRIGNWTPDGETEGARLRRDYLELEPTQRMKQVFELSRFMSKMAAAGRRQRG
Ga0207705_100608912	3300025909	Corn Rhizosphere	VKSRKRTGNWTPEGKAELAALRRDYTDLTPAQRTEQVFELSRFMSQLAEAGRRQRRG
Ga0207695_105692102	3300025913	Corn Rhizosphere	MPVKPAKRSGNWTPDGKPERAALRRDYTELTPAQRTEQVFELSRFMSQVAESGHRRRSA
Ga0207663_106382471	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	PDGEAERAAARRDFRELTPAQRAEQAIELSRVLTRLAETGRRRRLG
Ga0207652_1000030332	3300025921	Corn Rhizosphere	MVQTPQRVGNWRPDGEVERARLRRDYIELDPARRLKQVCDLSRFMSRVAEAGRARRGA
Ga0207694_1000003542	3300025924	Corn Rhizosphere	MSVKSVKRTGNWTPDGIAEVAALRRDYVELTPSQRVGQVFELSRFMSQLAEAGRRQRSA
Ga0207659_114255881	3300025926	Miscanthus Rhizosphere	TGNWSPDGEADRAALRRDYTELTPAQRVAQVFELSRFMSRVAEAGRKRSA
Ga0207651_100027918	3300025960	Switchgrass Rhizosphere	MERPKRTGNWTPDEKAEHAALRRDYVELTPSQRAEQVIELSRFMSRVAEAGRRQRGA
Ga0208535_10045554	3300026045	Natural And Restored Wetlands	MGAASGKRIGNWSPDGEAERARLRRDYLELSPAQRMKQVCDLSRFMSRVAEAGRRQRGA
Ga0207648_1000179416	3300026089	Miscanthus Rhizosphere	MSMYGGFVKRAKRAGNWTPDGKAERAALRRDYTDLTPAQRMAQVFELSRFMSRVAEAGHRKRSA
Ga0207683_100459912	3300026121	Miscanthus Rhizosphere	VARKALYGGAVKRAQRTGNWTSDGKAERAALRRDYTDLTPAQRVAQVFELSRFMSRVAEAGHRKRSA
Ga0208602_10002063	3300027067	Forest Soil	MAAERSRIGNWTPDGTAERARLRRDYLELQPAQRVKQVSELSRFMSRVAEAGRRERGA
Ga0208998_100002440	3300027524	Forest Soil	MAAVERVGNWTPEGKAEVAALRRDYRELTPAQRAEQVFELSKFLSQVAEAGRQKRLG
Ga0208982_10105783	3300027574	Forest Soil	MEAERSRIGNWTPDGTAERARLRRDYLELQPAQRVKQVSELSRFMSRVAEAGRRERGA
Ga0214469_10249023	3300027636	Soil	METKRRTGNWTPAGEADRAALRRDFQKLTPAQRAEQAIELSRFMSRVAEAGRRRRGA
Ga0214469_10355403	3300027636	Soil	VYGLAVATKRLTGNWTPDGKAERAALRRDYLELTPAQRVEQVFELSRFMSRVAEAGRRQRGG
Ga0209112_100244593	3300027817	Forest Soil	MAAERSRIGNWTPDGTAERDRLRRDYLELQPAQRVKQVSELSRFMSRVAEAGRRERGA
Ga0268266_100126318	3300028379	Switchgrass Rhizosphere	MATGGKRIGNWSPDGEAERARLRRDYLELAPAERMKQVCELSRFMSRVAEAGRRQRGA
Ga0268265_103892322	3300028380	Switchgrass Rhizosphere	MKKDQRIGNWTPEGEAERAASRRDYRELTPAQRVEQVFELSRFMSRVAEAGRRQRGA
Ga0265322_10000001528	3300028654	Rhizosphere	MNAAKPTGNWTPEGKAERSALRRDYLELTPSQRVEQVFQLSRFMSEVAEAGRRQRSA
Ga0307301_101339292	3300028719	Soil	VKKPARAGNWTPEGIAEKAALQRDFRELTPAQRVEQVFELSRFMSRVAEAGRRRRGA
Ga0307319_1000001084	3300028722	Soil	VKKGERIGNWSPDGKAERAALRRDYRELTPAQRAEQVFELSRFMSRVAEAGGRRRIA
Ga0307288_10000005148	3300028778	Soil	VKKPERIGNWSPDGKAERAALRRDYRELTPAQRVEQVFELSRFMSRVAEAGRRRGIA
Ga0307517_106636552	3300028786	Ectomycorrhiza	MAVRPSRIGNWTPDGEAEGARLRRDYIELEPAQRMKQVFELSRFMSKMAEAGRRQRGV
Ga0307283_100053892	3300028790	Soil	MKPARKGNWTPDGRADRAALRREYEELTPAQRVEQVFELSKFMVGVADAGRRQRLG
Ga0268243_10090083	3300030510	Soil	VKDGERIGNWSPDGKAERAALRRDYRELTPAQRVEQVFELSRFMSRVAEAGRRRTAFRG
Ga0268386_101638252	3300030619	Soil	MSVKARKRAGNWTPEGVAERVALRRDYTELTPAERVEQVFELSRVVSQLAEAGRRQRSA
Ga0299914_100019918	3300031228	Soil	MATERKRIGNWSPDGEAERARLRRDYLELDPAQRMKQVSDLSRFMSRVAEAGRRRHGG
Ga0299914_100183412	3300031228	Soil	MTTGRKRVGNWSPDGEAERARLRRDYLELDPAQRMKQVCDLSRFMSRVAEVGRRQRGA
Ga0307506_103335482	3300031366	Soil	VKSKKRTGNWTPEGTAELAALRRGYTDLTPAQRTEQVFELSWFMSQLAEAGSRTQGDRKT
Ga0310892_104934662	3300031858	Soil	MTATQRKGNWTPEGKAEQAALRRDYLELTPAQRVEQVFELSKFMAQVAESGRRQRLA
Ga0308175_1012954621	3300031938	Soil	MAMKTAKRVGNWTPDGKAERAALRRDYSELTPAQRTQQVFELSRFMSRVAESGHRQRGA
Ga0307415_1000385295	3300032126	Rhizosphere	VKKGERTGNWSPDGKAERAALRRDFRELTPAQRAEQVMELSRFMSHVAEAGRRRRLG
Ga0316583_102244171	3300032133	Rhizosphere	MAAEPTRVGNWTPGGEAERARLRRDYLELDPAQRMKQVCELSRFMSRVAEAGRRKRGG
Ga0334911_003831_940_1122	3300034131	Sub-Biocrust Soil	MGEVKKTARTGNWTPEGTAERAALRRDFRELTPAQRVEQVFELSRFMSRVAEAGRRRRSV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F057346

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences