NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F057459

Metagenome / Metatranscriptome Family F057459

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F057459
Family Type Metagenome / Metatranscriptome
Number of Sequences 136
Average Sequence Length 54 residues
Representative Sequence VTGKRSRTGTILAAAVLIAAGFTVAIVEMLRLPKGTIWIVVAVAVGALAVIRAATR
Number of Associated Samples 113
Number of Associated Scaffolds 136

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 60.74 %
% of genes near scaffold ends (potentially truncated) 28.68 %
% of genes from short scaffolds (< 2000 bps) 73.53 %
Associated GOLD sequencing projects 105
AlphaFold2 3D model prediction Yes
3D model pTM-score0.56

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (99.265 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere
(13.971 % of family members)
Environment Ontology (ENVO) Unclassified
(24.265 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(44.853 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 57.14%    β-sheet: 0.00%    Coil/Unstructured: 42.86%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.56
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 136 Family Scaffolds
PF01075Glyco_transf_9 47.79
PF00459Inositol_P 7.35
PF02627CMD 4.41
PF00795CN_hydrolase 2.94
PF05425CopD 2.94
PF00296Bac_luciferase 1.47
PF02566OsmC 0.74
PF02880PGM_PMM_III 0.74
PF02878PGM_PMM_I 0.74
PF01208URO-D 0.74
PF13419HAD_2 0.74

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 136 Family Scaffolds
COG0859ADP-heptose:LPS heptosyltransferaseCell wall/membrane/envelope biogenesis [M] 47.79
COG0599Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase familyGeneral function prediction only [R] 4.41
COG2128Alkylhydroperoxidase family enzyme, contains CxxC motifInorganic ion transport and metabolism [P] 4.41
COG1276Putative copper export proteinInorganic ion transport and metabolism [P] 2.94
COG0033Phosphoglucomutase/phosphomannomutaseCarbohydrate transport and metabolism [G] 1.47
COG1109PhosphomannomutaseCarbohydrate transport and metabolism [G] 1.47
COG2141Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)Coenzyme transport and metabolism [H] 1.47
COG0407Uroporphyrinogen-III decarboxylase HemECoenzyme transport and metabolism [H] 0.74
COG1764Organic hydroperoxide reductase OsmC/OhrADefense mechanisms [V] 0.74
COG1765Uncharacterized OsmC-related proteinGeneral function prediction only [R] 0.74

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms99.26 %
UnclassifiedrootN/A0.74 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000550|F24TB_10526990All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1267Open in IMG/M
3300002558|JGI25385J37094_10208948All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium521Open in IMG/M
3300002562|JGI25382J37095_10008896All Organisms → cellular organisms → Bacteria3704Open in IMG/M
3300002908|JGI25382J43887_10242857All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium833Open in IMG/M
3300002908|JGI25382J43887_10502204All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria513Open in IMG/M
3300003324|soilH2_10038543All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1964Open in IMG/M
3300004114|Ga0062593_103192819All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium525Open in IMG/M
3300004633|Ga0066395_10501422All Organisms → cellular organisms → Bacteria699Open in IMG/M
3300005171|Ga0066677_10033144All Organisms → cellular organisms → Bacteria2490Open in IMG/M
3300005171|Ga0066677_10215029All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1081Open in IMG/M
3300005172|Ga0066683_10044464All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria2606Open in IMG/M
3300005174|Ga0066680_10147624All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1469Open in IMG/M
3300005174|Ga0066680_10692529All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium626Open in IMG/M
3300005176|Ga0066679_10714103All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium648Open in IMG/M
3300005180|Ga0066685_10009081All Organisms → cellular organisms → Bacteria5466Open in IMG/M
3300005186|Ga0066676_10364414All Organisms → cellular organisms → Bacteria969Open in IMG/M
3300005330|Ga0070690_100208163All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1364Open in IMG/M
3300005332|Ga0066388_100488099All Organisms → cellular organisms → Bacteria1869Open in IMG/M
3300005355|Ga0070671_100374724All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1216Open in IMG/M
3300005356|Ga0070674_100253926All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1382Open in IMG/M
3300005444|Ga0070694_101689537All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium538Open in IMG/M
3300005447|Ga0066689_10322866All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria960Open in IMG/M
3300005468|Ga0070707_100162189All Organisms → cellular organisms → Bacteria2178Open in IMG/M
3300005547|Ga0070693_100984058All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium637Open in IMG/M
3300005557|Ga0066704_10778068All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium596Open in IMG/M
3300005569|Ga0066705_10300347All Organisms → cellular organisms → Bacteria1017Open in IMG/M
3300005713|Ga0066905_100696184All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium871Open in IMG/M
3300005713|Ga0066905_101585432All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium599Open in IMG/M
3300005764|Ga0066903_100069094All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria4500Open in IMG/M
3300006049|Ga0075417_10000978All Organisms → cellular organisms → Bacteria7363Open in IMG/M
3300006049|Ga0075417_10002736All Organisms → cellular organisms → Bacteria5392Open in IMG/M
3300006237|Ga0097621_101059482All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium RIFCSPLOWO2_02_FULL_68_19760Open in IMG/M
3300006800|Ga0066660_11338918All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium560Open in IMG/M
3300006806|Ga0079220_11846669All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium534Open in IMG/M
3300006844|Ga0075428_100468237All Organisms → cellular organisms → Bacteria1349Open in IMG/M
3300006844|Ga0075428_102596949All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium517Open in IMG/M
3300006847|Ga0075431_100014666All Organisms → cellular organisms → Bacteria7929Open in IMG/M
3300006852|Ga0075433_10588545All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium977Open in IMG/M
3300006854|Ga0075425_100022855All Organisms → cellular organisms → Bacteria6868Open in IMG/M
3300006854|Ga0075425_101315798All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria819Open in IMG/M
3300006854|Ga0075425_101965074All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria654Open in IMG/M
3300006880|Ga0075429_100126225All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria2237Open in IMG/M
3300006880|Ga0075429_101592810All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium568Open in IMG/M
3300006903|Ga0075426_10791492All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium713Open in IMG/M
3300006903|Ga0075426_10958244All Organisms → cellular organisms → Bacteria646Open in IMG/M
3300006914|Ga0075436_101170517All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium580Open in IMG/M
3300006969|Ga0075419_10038156All Organisms → cellular organisms → Bacteria3000Open in IMG/M
3300007255|Ga0099791_10463543All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium613Open in IMG/M
3300009092|Ga0105250_10211497All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium RIFCSPLOWO2_02_FULL_68_19820Open in IMG/M
3300009137|Ga0066709_100000167All Organisms → cellular organisms → Bacteria28568Open in IMG/M
3300009162|Ga0075423_10012373All Organisms → cellular organisms → Bacteria8270Open in IMG/M
3300010043|Ga0126380_10406497All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1013Open in IMG/M
3300010046|Ga0126384_10240953All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1456Open in IMG/M
3300010046|Ga0126384_12436586All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium507Open in IMG/M
3300010047|Ga0126382_10429745All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1040Open in IMG/M
3300010087|Ga0127492_1097538All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium521Open in IMG/M
3300010336|Ga0134071_10453215All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium658Open in IMG/M
3300010361|Ga0126378_12077941All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium648Open in IMG/M
3300012096|Ga0137389_10012427All Organisms → cellular organisms → Bacteria5733Open in IMG/M
3300012199|Ga0137383_10650850All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium770Open in IMG/M
3300012202|Ga0137363_10206056All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1580Open in IMG/M
3300012202|Ga0137363_10685821All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium867Open in IMG/M
3300012203|Ga0137399_10691161All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium859Open in IMG/M
3300012205|Ga0137362_10008561All Organisms → cellular organisms → Bacteria7323Open in IMG/M
3300012205|Ga0137362_10167475All Organisms → cellular organisms → Bacteria1885Open in IMG/M
3300012362|Ga0137361_11109784All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium712Open in IMG/M
3300012685|Ga0137397_10272666All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1260Open in IMG/M
3300012685|Ga0137397_10523342All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria883Open in IMG/M
3300012918|Ga0137396_10030583All Organisms → cellular organisms → Bacteria3560Open in IMG/M
3300012922|Ga0137394_10401565All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1168Open in IMG/M
3300012930|Ga0137407_10551118All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1080Open in IMG/M
3300012944|Ga0137410_10823597All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium RIFCSPLOWO2_02_FULL_68_19781Open in IMG/M
3300012975|Ga0134110_10631853All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium500Open in IMG/M
3300012976|Ga0134076_10000027All Organisms → cellular organisms → Bacteria23434Open in IMG/M
3300015054|Ga0137420_1501892All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1672Open in IMG/M
3300015371|Ga0132258_10043467All Organisms → cellular organisms → Bacteria10230Open in IMG/M
3300015371|Ga0132258_10150272All Organisms → cellular organisms → Bacteria5584Open in IMG/M
3300015371|Ga0132258_12358659All Organisms → cellular organisms → Bacteria1334Open in IMG/M
3300015374|Ga0132255_100463071All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1857Open in IMG/M
3300015374|Ga0132255_105067519All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium558Open in IMG/M
3300016319|Ga0182033_10185821All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1640Open in IMG/M
3300017659|Ga0134083_10005432All Organisms → cellular organisms → Bacteria4052Open in IMG/M
3300017659|Ga0134083_10103160All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1126Open in IMG/M
3300017966|Ga0187776_10005439All Organisms → cellular organisms → Bacteria6649Open in IMG/M
3300018032|Ga0187788_10327357All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium627Open in IMG/M
3300018431|Ga0066655_10168378All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1321Open in IMG/M
3300018433|Ga0066667_10010031All Organisms → cellular organisms → Bacteria4501Open in IMG/M
3300018468|Ga0066662_12160400All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium584Open in IMG/M
3300018468|Ga0066662_12752069All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium521Open in IMG/M
3300020170|Ga0179594_10163048All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium828Open in IMG/M
3300021560|Ga0126371_11508200All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium800Open in IMG/M
3300025910|Ga0207684_11054390All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium678Open in IMG/M
3300025930|Ga0207701_10377750All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1223Open in IMG/M
3300025931|Ga0207644_10967870All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium714Open in IMG/M
3300025961|Ga0207712_10332417All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1257Open in IMG/M
3300026078|Ga0207702_11623893All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium640Open in IMG/M
3300026297|Ga0209237_1291158All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium501Open in IMG/M
3300026298|Ga0209236_1088099All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1422Open in IMG/M
3300026309|Ga0209055_1000882All Organisms → cellular organisms → Bacteria → Proteobacteria20256Open in IMG/M
3300026310|Ga0209239_1035596All Organisms → cellular organisms → Bacteria2333Open in IMG/M
3300026328|Ga0209802_1016225All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria4210Open in IMG/M
3300026332|Ga0209803_1026175All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium2817Open in IMG/M
3300026334|Ga0209377_1126698All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1015Open in IMG/M
3300026377|Ga0257171_1034543All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria866Open in IMG/M
3300026537|Ga0209157_1113152All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1267Open in IMG/M
3300027646|Ga0209466_1002075All Organisms → cellular organisms → Bacteria4081Open in IMG/M
3300027821|Ga0209811_10011218All Organisms → cellular organisms → Bacteria2880Open in IMG/M
3300027821|Ga0209811_10150230All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium863Open in IMG/M
3300027873|Ga0209814_10004547All Organisms → cellular organisms → Bacteria5255Open in IMG/M
3300027873|Ga0209814_10006807All Organisms → cellular organisms → Bacteria4411Open in IMG/M
3300027880|Ga0209481_10135831All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1208Open in IMG/M
3300027903|Ga0209488_10066291All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria2673Open in IMG/M
3300028536|Ga0137415_10928550All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium680Open in IMG/M
3300028792|Ga0307504_10244701All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria654Open in IMG/M
(restricted) 3300031150|Ga0255311_1029591All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1141Open in IMG/M
3300031170|Ga0307498_10132805All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium807Open in IMG/M
3300031226|Ga0307497_10017903All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium2134Open in IMG/M
3300031543|Ga0318516_10880877All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium504Open in IMG/M
3300031640|Ga0318555_10483209All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium671Open in IMG/M
3300031720|Ga0307469_10707998All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium914Open in IMG/M
3300031740|Ga0307468_100050520All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium2167Open in IMG/M
3300031740|Ga0307468_101052178All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium721Open in IMG/M
3300031751|Ga0318494_10289786All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria943Open in IMG/M
3300031805|Ga0318497_10216299All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1060Open in IMG/M
3300031820|Ga0307473_10057854All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1876Open in IMG/M
3300031846|Ga0318512_10713065All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium515Open in IMG/M
3300031860|Ga0318495_10279664All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium744Open in IMG/M
3300031879|Ga0306919_10667725All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium801Open in IMG/M
3300031893|Ga0318536_10670861All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium517Open in IMG/M
3300032180|Ga0307471_100665420All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1204Open in IMG/M
3300032180|Ga0307471_101984240All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium729Open in IMG/M
3300032205|Ga0307472_101881421All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium596Open in IMG/M
3300032261|Ga0306920_100575939All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1667Open in IMG/M
3300033433|Ga0326726_10089693All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria2735Open in IMG/M
3300034669|Ga0314794_154082All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium535Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil13.97%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere13.97%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil11.03%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil8.82%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil5.88%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil5.15%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil4.41%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil4.41%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil4.41%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere3.68%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.94%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.21%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil2.21%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.21%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil2.21%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland1.47%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.47%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.47%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.74%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.74%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil0.74%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere0.74%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.74%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.74%
Sandy SoilEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil0.74%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil0.74%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.74%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.74%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.74%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000550Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemlyEnvironmentalOpen in IMG/M
3300002558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cmEnvironmentalOpen in IMG/M
3300002562Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cmEnvironmentalOpen in IMG/M
3300002908Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cmEnvironmentalOpen in IMG/M
3300003324Sugarcane bulk soil Sample H2EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004633Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBioEnvironmentalOpen in IMG/M
3300005171Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126EnvironmentalOpen in IMG/M
3300005172Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132EnvironmentalOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005176Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005447Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138EnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005529Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1EnvironmentalOpen in IMG/M
3300005547Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaGEnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005569Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154EnvironmentalOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006049Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1Host-AssociatedOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006880Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3Host-AssociatedOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300006969Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3Host-AssociatedOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300009092Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaGHost-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010087Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_0_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010336Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012975Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015EnvironmentalOpen in IMG/M
3300012976Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300015054Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300017659Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300017966Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MGEnvironmentalOpen in IMG/M
3300018032Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MGEnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300020170Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026297Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026298Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026309Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)EnvironmentalOpen in IMG/M
3300026310Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026328Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)EnvironmentalOpen in IMG/M
3300026332Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)EnvironmentalOpen in IMG/M
3300026334Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)EnvironmentalOpen in IMG/M
3300026377Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-BEnvironmentalOpen in IMG/M
3300026537Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)EnvironmentalOpen in IMG/M
3300027646Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes)EnvironmentalOpen in IMG/M
3300027821Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027873Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027880Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)Host-AssociatedOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300028792Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_SEnvironmentalOpen in IMG/M
3300031150 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4EnvironmentalOpen in IMG/M
3300031170Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_SEnvironmentalOpen in IMG/M
3300031226Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_SEnvironmentalOpen in IMG/M
3300031543Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20EnvironmentalOpen in IMG/M
3300031640Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031751Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24EnvironmentalOpen in IMG/M
3300031805Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031846Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19EnvironmentalOpen in IMG/M
3300031860Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25EnvironmentalOpen in IMG/M
3300031879Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)EnvironmentalOpen in IMG/M
3300031893Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300033433Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MNEnvironmentalOpen in IMG/M
3300034669Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R3 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
F24TB_1052699023300000550SoilMRGKHSRTGTILAAAVLIGAGFAVAAVEILRLPKGTIWIVVAVAVAALTIIRAATRRKLGGGD*
JGI25385J37094_1020894813300002558Grasslands SoilDSRTTDEVLAVSGRRSRIGVILAGGVLVAAGFAVAIVEMLRLPKGTIWIVVAAAVVLLTVIRAATR*
JGI25382J37095_1000889653300002562Grasslands SoilLSGRRSRIGVILAGGVLVAAGFAVAIVEMLRLPKGTIWIVVAAAVVLLTVIRAATR*
JGI25382J43887_1024285733300002908Grasslands SoilVTGKRSRTGTILAAAVLIAAGFTVAIVEMLRLPKGTIWLVVAVAVGALAVIRAATR*
JGI25382J43887_1050220413300002908Grasslands SoilVTAKRSRTGTILAAAVLIAAGFTVAIVEMLRLPKGTIWIVVAIAVGALAVIRAATR*
soilH2_1003854323300003324Sugarcane Root And Bulk SoilLTVKRSRTGTILAAVVLIAAGFTVAVVEMLHLPKGTIWIVVAVAVGALALIRAATR*
Ga0062593_10319281923300004114SoilVRPRGTILAASVLIAAGFAVAVVEMLRLPKGTIWIVVAVAVAALAIIRAATR*
Ga0066395_1050142223300004633Tropical Forest SoilMVSRKRSRTGTVLAACVVIAAGFAVAVVEMLRMPKGTIWLVVAAAVAILAVIRVATR
Ga0066677_1003314413300005171SoilLAAAVLIAAGFTVAIVELPRLPKGTIWIVVAVAVGALAVIRAATR*
Ga0066677_1021502913300005171SoilVRLGTVLAAGVLIAAGFAVAIAEMLHLPKGTIWIVVAAAVAILAVIRAATR*
Ga0066683_1004446433300005172SoilVSGRRSRIGVILAGGVLVAAGFAVAIVEMLRLPKGTIWIVVAAAVVLLTVIRAATR*
Ga0066680_1014762423300005174SoilVIGKRSRTGTILAAAVLIAAGFTVAIVELLRLPKGTIWIVVAVAVGALAVIRAATR*
Ga0066680_1069252913300005174SoilRSRIGVILAGGVLVAAGFAVAIVEMLRLPKGTIWIVVAAAVVLLTVIRAATR*
Ga0066679_1071410323300005176SoilMTGKRSRTGSILAAAVLIAAGFTVAAVEMLRLPKATIWIVVALAVGALAVIRAATR*
Ga0066685_1000908143300005180SoilLLRSKRSRTGTVLSASVVIAAGFAVAVVEMLRLPKGAIWVVVAVAVGILAVIRAATR*
Ga0066676_1036441423300005186SoilMTGKRSRTGTILAAAVLIAAGFTVAVVEMLRLPKGTIWIVVAVAVAALAVIRAATRY*
Ga0070690_10020816323300005330Switchgrass RhizosphereVSPRGTILAASVLIAAGFAVAVVEMLRLPKGTIWIVVAVAVAALAIIRAATR*
Ga0066388_10048809933300005332Tropical Forest SoilMSVERSRAGTILAASVVIAAGFAVAIVEMLRLPKGTIWVVAAIAVGLLAIV
Ga0070671_10037472423300005355Switchgrass RhizosphereVSARRSRTGTVLAASVLIAAGFAVAVVEMLRLPKGTIWIVVAVAVAALAIIRSATR*
Ga0070674_10025392623300005356Miscanthus RhizosphereVKPRGTILAASVLIAAGFAVAVVEMLRLPKGTIWIVVAVAVAALAIIRAATR*
Ga0070694_10168953713300005444Corn, Switchgrass And Miscanthus RhizosphereLTAKRSRTGTILAAVVLIAAGFTVAVVEMLHLPKGTIWIVVAVAVGALA
Ga0066689_1032286613300005447SoilFYGETPLLRSKRSRTGTVLSASVVIAAGFAVAVVEMLRLPKGAIWVVVAVAVGILAVIRAATR*
Ga0070707_10016218913300005468Corn, Switchgrass And Miscanthus RhizosphereVTGKRSPTGTILAAAVLIAAGFTVAIVEMLRLPKGTIWIVVAAAVGALAVIRAATR*
Ga0070741_10029187123300005529Surface SoilVSRRRASWGAALAGGVLVAAGFAVAIVEVLRLPKGSVWGVVAVAVMLLVAIRRLAR*
Ga0070693_10098405813300005547Corn, Switchgrass And Miscanthus RhizosphereVGARRSRTGTVLAASVLIAAGLAVAVVEMLRLPKGTIWIVVAVAVAALAIIRSATR*
Ga0066704_1077806823300005557SoilKRSRTGTILAAAVLIAAGFTVAIVEMLRLPKGTIWIVVAIAVGALAVIRAATR*
Ga0066705_1030034733300005569SoilVRLGTVLAACVLIAAGFAVAIAEMLHLPKGTIWIVVAAAVAILAVIRAATR*
Ga0066905_10069618423300005713Tropical Forest SoilMVSGKRSRTGTVLAACVVIAGGFTVAVVEMLHLPKGTIWLVVAAAVAILAVIRAATR*
Ga0066905_10158543223300005713Tropical Forest SoilMVSRKRSRTGTVLAACVVIAAGFAVAVVEMLRMPKGTIWLVVAAAVAILAVIRVATR*
Ga0066903_10006909423300005764Tropical Forest SoilMSAKRSPTGTILAASVLIAAGFTVAIVEMLRMPKGTIWIVVAVTVAALAVIRAATR*
Ga0075417_1000097893300006049Populus RhizosphereVTGKRSRTGAILAAAVLITAGFTVAVVEMLHLPRGSIWIVIALAVGALVVIRAATR*
Ga0075417_1000273633300006049Populus RhizosphereLTAKRSRTGTILAAVVLIAAGFTVAVVEMLHLPKGTIWIVVAVAVGALAVIRAATR*
Ga0097621_10105948213300006237Miscanthus RhizospherePRGTILAASVLIAAGFAVAVVEMLRLPKGTIWIVVAVAVAALAIIRSATR*
Ga0066660_1133891833300006800SoilATSMTGRRSRTGSILAAAVLISAGFAVAVVEMLRLPKATIWIVVALAAGALAVIRAATR*
Ga0079220_1184666923300006806Agricultural SoilLAASVLIAAGFAVAVVEMLRLPKGTIWVVVAAAVAALAVIRSATR*
Ga0075428_10046823713300006844Populus RhizosphereMRGKHSRTGTILAAAVLIGAGFAVAAVEILRLPKGTIWIVVAVAVAALTII
Ga0075428_10259694923300006844Populus RhizosphereLTAKRSRTGTILAGVVLIAAGFTVAVVEMLHLPKGTIWIVVAVAVGALAVIRAATR*
Ga0075431_10001466643300006847Populus RhizosphereVTGKRSRTGAILAAAVLITAGFTVAVVEMLHLPRGSIWIVIALAVGVLVVIRAATR*
Ga0075433_1058854533300006852Populus RhizosphereMRRRSRTGTVLAASVLIAAGFAVAVVEMLRLPKGTIWFVVAVAVAALAVIRSATR*
Ga0075425_10002285523300006854Populus RhizosphereVTGKRSRTGTILAAAVLIAAGFTVAIVEMLRLPKGTIWIVVAVAVGALAVIRAATR*
Ga0075425_10131579823300006854Populus RhizosphereVSGKRSRTGTVLSAAVVIAAGFTVAVVEMLRLPNGTIWLVVAAAVAILAVIRAATR*
Ga0075425_10196507423300006854Populus RhizosphereMSTRRSRTGTILAASVLIAAGFAVAVVEMLRLPKGTIWVVVAAAVAALAVIRSATR*
Ga0075429_10012622543300006880Populus RhizosphereILAAVVLIAAGFTVAVVEMLHLPKGTIWIVVAVAVGALAVIRAATR*
Ga0075429_10159281023300006880Populus RhizosphereMRGKRSRTGTILAAAVLMGAGFAVAAVEILRLPKGTIWIVVAVAVAALTIIRAATRRKLGGGD*
Ga0075426_1079149223300006903Populus RhizosphereVTRKRSRTGTILAAAVLIAAGFTVAIVEMLRLPKGTIWIVVAVAVGALAVIRAATR*
Ga0075426_1095824423300006903Populus RhizosphereMVSGKRSRTGTLLSAAVVIAAGFTVAVVEMLRLPKGTIWLVVAAAVAILAVIRAATR*
Ga0075436_10117051723300006914Populus RhizosphereVTGKRSRTGTILAAAVLIAAGFTVAIVEMLRLPKGTIWIVVAVAVGA
Ga0075419_1003815643300006969Populus RhizosphereVTGKRSRTGAILAAGVLITAGFTVAVVEMLHLPRGSIWIVIALAVGALVVIRAATR*
Ga0099791_1046354313300007255Vadose Zone SoilRRSRTSSILAASVLIAAGFAIAGVEMLRLPKGTIWVVVGAAVAILAVIRATTR*
Ga0105250_1021149713300009092Switchgrass RhizosphereVTPVSPRGTILAASVLIAAGFAVAVVEMLRLPKGTIWIVVAVAVAALAIIRAATR*
Ga0066709_100000167293300009137Grasslands SoilVILAGGVLVAAGFAVAIVEMLRLPKGTIWIVVAAAVVLLTVIRAATR*
Ga0075423_1001237393300009162Populus RhizosphereVRPRGTILAASVLIAAGFGVAVVEMLRLPKGTIWIVVAVAVAALAIIRAATR*
Ga0126380_1040649713300010043Tropical Forest SoilMVSGKRSRTGTVFAACVVIAAGFTVAVVEMLHLPKGTIWLVVAAAVAILAVIRAATR*
Ga0126384_1024095323300010046Tropical Forest SoilMVSGKRSRTGTVLAACVVIAAGFTVAVVEMLHLPKGTIWLVVAAAVAILAVIRAATR*
Ga0126384_1243658623300010046Tropical Forest SoilVKRSRTGTILAAVVLIAAGFTVAVVEMLHLPKGTIWIVVAVAVGALAIIRAATR*
Ga0126382_1042974523300010047Tropical Forest SoilMVSRKRSRTGTVLAACVVIAAGFAVAVVEMLRMPKGTIWLVVAAAVTILAVIRVATR*
Ga0127492_109753823300010087Grasslands SoilLLRSKRSRTGTVLSASVVIAAGFAVAVVEMLRLPKGAIWVVVAVAVGILAVIRAATRY*
Ga0134071_1045321523300010336Grasslands SoilMTGKRSRTGTILAAAVLIAAGFTVAIVEMLRLPKGTIWIVVAVAVGALAVIRAATR*
Ga0126378_1207794113300010361Tropical Forest SoilMSVKRSPTGTVLAASVLIAAGFTVAIVEMLRMPKGTIWIVVAVTVAALA
Ga0137389_1001242743300012096Vadose Zone SoilMLAAGVLIAAGFTVAVVEMLRLPKGTIWIVVAAAVVMLAIIRAATR*
Ga0137383_1065085023300012199Vadose Zone SoilMTGKRSRTGTILAAAVLIAAGFTVAVVEMLRLPKGTIWIVVAVAVVALALIRAATRY*
Ga0137363_1020605633300012202Vadose Zone SoilMTGKRSRTGSILAAAVLIAAGFTVAAVEMLRLPKGTIWIVVAIAAGALAVI
Ga0137363_1068582123300012202Vadose Zone SoilVRTRGTILAASVLIAAGFAVAVVEMLRLPKGTIWIVVAVAVAALAIIRAATR*
Ga0137399_1069116123300012203Vadose Zone SoilMTGKRSRTGSILAAAVLIAAGFTVAAVEMLRLPKGAIWIVVALAVGALAVIRAATR*
Ga0137362_1000856133300012205Vadose Zone SoilMTGKRSRTGSILAAAVLIAAGFTVAAVEMLRLPKGTIWIVVAIAAGALAVIRAATR*
Ga0137362_1016747533300012205Vadose Zone SoilVRTRGTILAASVLIAAGFAVAVVEMLRLPKGTMWIVVAVAVAAL
Ga0137361_1110978433300012362Vadose Zone SoilADDVTPVRPRGTILAASVLIAAGFAVAVVEMLRLPKGTIWIVVAVAMAALAIIRAATR*
Ga0137397_1027266623300012685Vadose Zone SoilVSGRRSRTSSILAASVLIAAGFAIAGVEMLRLPKGTIWVVVGAAVAILAVIRATTR*
Ga0137397_1052334213300012685Vadose Zone SoilVSGRRSRTSSILAASVVIAAGFAIAVVEMLRLPKGTIWVVVVAAAAILAVIRATTR*
Ga0137396_1003058343300012918Vadose Zone SoilMTGKRSRTGSILAAAVLIAAGFTVAAVEMLRLPKGTIWIVVALAVGALAVIRAATR*
Ga0137394_1040156523300012922Vadose Zone SoilVSGRRSRTSSILAASVLIAAGFAIAGVEMLRLPKGTIWVIVGAAVAILAVIRATTR*
Ga0137407_1055111823300012930Vadose Zone SoilVRTRGTILAASVLIAAGFAVAVVEMLRLPKGTIWIVVAVAMAALAIIRAATR*
Ga0137410_1082359733300012944Vadose Zone SoilPVRPRGTILAASVLIAAGFAVAVVEMLRLPKGTIWIVVAVAVAALAIIRAATR*
Ga0134110_1063185323300012975Grasslands SoilVRLGTVLAAGVLIAAGFAVAIAEMLHLPKGTIWIVVAAPVAILAVIRAATR*
Ga0134076_1000002743300012976Grasslands SoilLLRSKRSRTGTVLSASVVIAAGFAVAVVEMLRLPEGAIWVVVAVAVGILAVIRAATR*
Ga0137420_150189223300015054Vadose Zone SoilMTGKRSRTGSILAAAVLIAAGFTVAAVEMLRLPKGTIWIVVALAVGALAVIRAAMR*
Ga0132258_1004346763300015371Arabidopsis RhizosphereMRARRSRTATILAATVLIAAGFAVAVVEMLRLPKGTIWIVVAVAVAALAVIRSATR*
Ga0132258_1015027233300015371Arabidopsis RhizosphereMRARRSRTATILAASILIAAGFAVAVVEMLRLPKGTIWIVVAVAVAVLAVIRSATR*
Ga0132258_1235865913300015371Arabidopsis RhizosphereVRPRGTILAASVLIAAGFAVAVVEMLRLPKGTIWIVVAVAVAALAVIRAATR*
Ga0132255_10046307123300015374Arabidopsis RhizosphereLTAKRSRTGTILAAVVLIAAGFTVAVVEMLHLPKGTIWIVVAIAVGALAVIRAATR*
Ga0132255_10506751913300015374Arabidopsis RhizosphereVRTRGTILAASVLIAAGFAVAVVEMLGLPKGTSWIVVAVAVAALAIIRAATR*
Ga0182033_1018582113300016319SoilSPTGTILAASVLIAAGFTVAIVEMLRMPKGTIWIVVAVTVAALAVIRAATR
Ga0134083_1000543243300017659Grasslands SoilLLRSKRSRTGTVLSASVVIAAGFAVAVVEMLRLPEGAIWVVVAVAVGILAVIRAATR
Ga0134083_1010316013300017659Grasslands SoilMTGKRSRTGTILAAAVLIAAGFTVAVVEMLRLPKGTIWIVVAVAVVALALIRAATRY
Ga0187776_1000543933300017966Tropical PeatlandVRTILSASVLIAAGFVVAIVELLRFPKGTIWIVVAVTVAALAIIRSTTR
Ga0187788_1032735713300018032Tropical PeatlandVRTILAASVLIAAGFAVAVVELLRFPKRTIWIVVAVTIAALAIIRSATR
Ga0066655_1016837823300018431Grasslands SoilLLRSKRSRTGTVLSASVVIAAGFAVAVVEMLRLPKGAIWVVVAVAVGILAVIRAATR
Ga0066667_1001003143300018433Grasslands SoilVRLGTVLAAGVLIAAGFAVAIAEMLHLPKGTIWIVVAAAVAILAVIRAATR
Ga0066662_1216040013300018468Grasslands SoilGTILAAAVLIAAGFTVAIVELLRLPKGTIWIGVAVAVGALAVIRAATR
Ga0066662_1275206923300018468Grasslands SoilVILAGGVLVAAGFAVAIVEMLRLPKGTIWIVVAAAVVLLTVIRAATR
Ga0179594_1016304823300020170Vadose Zone SoilMTGKRSRTGSILAAAVLIAAGFTVAAVEMLRLPKGTIWIVVAIAAGALAVIRAATR
Ga0126371_1150820023300021560Tropical Forest SoilMSAKRSPTGTILAASVLIAAGFTVAIVEMLRMPKGTIWIVVAVTVAALAVIRAATR
Ga0207684_1105439013300025910Corn, Switchgrass And Miscanthus RhizosphereVTGKRSRTGTILAAAVLIAAGFTVAIVEMLRLPKGTIWIVVAVAVGALAVIRAATR
Ga0207701_1037775033300025930Corn, Switchgrass And Miscanthus RhizosphereVKPRGTILAASVLIAAGFAVAVVEMLRLPKGTIWIVVAVAVAALAIIRAATR
Ga0207644_1096787023300025931Switchgrass RhizosphereVGARRSRTGTVLAASVLIAAGLAVAVVEMLRLPKGTIWIVVAVAVAALAIIRSATR
Ga0207712_1033241733300025961Switchgrass RhizosphereVSPRGTILAASVLIAAGFAVAVVEMLRLPKGTIWIVVAVAVAALAIIRAATR
Ga0207702_1162389323300026078Corn RhizosphereVGARRSRTGTVLAASVLIAAGFAVAVVEMLRLPKGTIWIVVAVAVAALAIIRSATR
Ga0209237_129115813300026297Grasslands SoilSLDSRTTDEVLAVSGRRSRIGVILAGGVLVAAGFAVAIVEMLRLPKGTIWIVVAAAVVLLTVIRAATR
Ga0209236_108809933300026298Grasslands SoilVSGRRSRIGVILAGGVLVAAGFAVAIVEMLRLPKGTIWIVVAAAVVLLTVIRAATR
Ga0209055_1000882123300026309SoilVIGKRSRTGTILAAAVLIAAGFTVAIVELLRLPKGTIWIVVAVAVGALAVIRAATR
Ga0209239_103559633300026310Grasslands SoilVRLGTVLAAGVLIAAGFAVAIAEMLHLPKGTIWIVVAAAVVILAVIRAATR
Ga0209802_101622553300026328SoilVTAKRSRTGTILAAAVLIAAGFTVAIVEMLRLPKGTIWIVVAIAVGALAVIRAATR
Ga0209803_102617533300026332SoilMTGKRSRTGTILAAAVLIAAGVVEMLRLPKGTIWIVVAVAVVALAVIRAATRY
Ga0209377_112669833300026334SoilVTAKRSRTGTILAAAVLIAAGFTVAIVEMLRLPKGTIWIVVAVAVGALAVIRAATR
Ga0257171_103454313300026377SoilILAAGVLIAAGFTVAVVEMLRLPKGTIWIVVAAAVAMLAVIRAATR
Ga0209157_111315223300026537SoilMTAKRSRTGTILAAAVLIAAGFTVAVVEMLRLPKGTIWIVVAVAVAALAVIRAATRY
Ga0209466_100207533300027646Tropical Forest SoilMVSGKRSRTGTVLAACVVIAGGFTVAVVEMLHLPKGTIWLVVAAAVAILAVIRAATR
Ga0209811_1001121853300027821Surface SoilVRPRGTILAATVLIAAGFAVAVVEMLRLPKGTIWIVVAVAVAALAVIRAATR
Ga0209811_1015023023300027821Surface SoilVRPRGTILAASVLIAAGFAVAVVEMLRLPKGTIWIVVAVAVAALAIIRAATR
Ga0209814_1000454723300027873Populus RhizosphereVTGKRSRTGAILAAAVLITAGFTVAVVEMLHLPRGSIWIVIALAVGALVVIRAATR
Ga0209814_1000680743300027873Populus RhizosphereLTAKRSRTGTILAAVVLIAAGFTVAVVEMLHLPKGTIWIVVAVAVGALAVIRAATR
Ga0209481_1013583133300027880Populus RhizosphereTILAAVVLIAAGFTVAVVEMLHLPKGTIWIVVAVAVGALAVIRAATR
Ga0209488_1006629123300027903Vadose Zone SoilMSGKRSRTGPMLAAGVLIAAGFTVAVVEMLRLPKGTIWIVVAAAVVMLAIIRAATR
Ga0137415_1092855013300028536Vadose Zone SoilMTGKRSRTGSILAAAVLIAAGFTVAAVEMLRLPKGTIWIVVALAVGALAV
Ga0307504_1024470123300028792SoilVSGKRSRTGPILAAGVLIAAGFTVAVVEMLRLPKGTIWIVVAAAVAVLAVIRAATR
(restricted) Ga0255311_102959123300031150Sandy SoilVSGKRSRTGPILAAGVLIAAGFTVAVVEMLRLPKGTIWIVVAAAVAMLAVIRAATR
Ga0307498_1013280523300031170SoilVRPRGTILAASVLIAAGLAVAVVEMLRLPKGTIWIVVAVAVAALAIIRAATR
Ga0307497_1001790323300031226SoilVRPRGTILAASVLIAAGFAVAVVEMLRLPKGTIWIVVAVAVAALTIIRAATR
Ga0318516_1088087723300031543SoilTILAASVLIAAGFTVAIVEMLRMPKGTIWIVVAVTVAALAVIRAATR
Ga0318555_1048320933300031640SoilSGEVRSMSVKRSPTGTILAASVLIAAGFTVAIVEMLRMPKGTIWIVVAVTVAALAVIRAATR
Ga0307469_1070799823300031720Hardwood Forest SoilVSGKRSRTGTVLSAAVVIAAGLTVAVVEMLRLPNGTIWLVVAAAVAILAVIRAATR
Ga0307468_10005052023300031740Hardwood Forest SoilMRPRGTILAASVLIAAGFAVAVVEMLRLPKGTIWIVVAVAVAALAIIRAATR
Ga0307468_10105217823300031740Hardwood Forest SoilVRPGTVLSASVIVAAGFAVAVVEMLHLPKGTIWIVVAAAVAILAAIRAATR
Ga0318494_1028978613300031751SoilTIATVNPAASVLIAAGFTVAIVEMLRMPKGTIWIVVAVTVAALAVIRAATR
Ga0318497_1021629923300031805SoilMSVNRSPTGTILAASVLIAAGFTVAIVEMLRMPKGTIWIVVAVTVAALAVIRAATR
Ga0307473_1005785433300031820Hardwood Forest SoilVSGKRSRTGTVLSAAVVIAAGFTVAVVEMLRLPNGTIWLVVAAAVAILAVIRAATR
Ga0318512_1071306513300031846SoilKRSPTGTVLAASVLIAAGFTVAIVEMLRMPKGTIWIVVAVTVAALAVIRAATR
Ga0318495_1027966413300031860SoilMSVERSRTGTILAASVVIAAGFAVAVIEMVRLPKGTIWAVVAIAVGLLAIVRAA
Ga0306919_1066772523300031879SoilMSVKRSPTGTILAASVLIAAGFTVAIVEMLRMPKGTIWIVVAVTVAALAVIRAATR
Ga0318536_1067086123300031893SoilMSVERSRTGTILAASVVIAAGFAVAVIEMVRLPKGTIWAVVAIAVGLLA
Ga0307471_10066542023300032180Hardwood Forest SoilMVSGKRSRAGTILSAGVVIAAGFGVAVVEMLRLPKGTIWVVVAAAAAVLAAIRAATR
Ga0307471_10198424023300032180Hardwood Forest SoilVRPRGAILAASVLIAAGFAVAVVEMLRLPKGTIWIVVAVAVAALAIIRAATR
Ga0307472_10188142113300032205Hardwood Forest SoilTGTVLAASVLIAAGLAVAVVEMLRLPKGTIWIVVAVAVAALAIIRSATR
Ga0306920_10057593913300032261SoilMSVNRSPTGTILAASVLIAAGFTVAIVEMLRMPKGTIWIVVAVTVAAL
Ga0326726_1008969323300033433Peat SoilMSVKRSPAGTILAASVLIAAGFAVAVVEMLRLPKGTIWIVVAAAVAALAIIRAATR
Ga0314794_154082_1_1353300034669SoilVRPRGTILAASVLIAAGFAVAVVEMLRLPKGTIWIVVAVAVAALA

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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