Metagenome / Metatranscriptome Family F057460

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F057460
Family Type	Metagenome / Metatranscriptome
Number of Sequences	136
Average Sequence Length	49 residues
Representative Sequence	CPKGKAVSYYPDEIVVEGKLNVEEKKDDGFIVSIFEVEVNSVKPAAK
Number of Associated Samples	109
Number of Associated Scaffolds	136

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.74 %
% of genes near scaffold ends (potentially truncated)	98.53 %
% of genes from short scaffolds (< 2000 bps)	97.79 %
Associated GOLD sequencing projects	103
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.50

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (86.765 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere (8.088 % of family members)
Environment Ontology (ENVO)	Unclassified (41.176 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (55.147 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 38.67% Coil/Unstructured: 61.33%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.50
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.50
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 136 Family Scaffolds
PF11736	DUF3299	13.97
PF02653	BPD_transp_2	0.74
PF09537	DUF2383	0.74
PF00335	Tetraspanin	0.74

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	86.76 %
Unclassified	root	N/A	13.24 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	86.76 %
Unclassified	root	N/A	13.24 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	86.76 %
Unclassified	root	N/A	13.24 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	83.82 %
Unclassified	root	N/A	13.24 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.74 %

Name	Rank	Taxonomy	Distribution
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	83.82 %
Unclassified	root	N/A	13.24 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.74 %

Name	Rank	Taxonomy	Distribution
Phycisphaerae	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	83.09 %
Unclassified	root	N/A	13.24 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.74 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.74 %

Name	Rank	Taxonomy	Distribution
unclassified Phycisphaerae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae	43.38 %
Phycisphaerales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales	19.12 %
Unclassified	root	N/A	13.24 %
Pirellulales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales	0.74 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.74 %

Name	Rank	Taxonomy	Distribution
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	43.38 %
unclassified Phycisphaerales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales	19.12 %
Unclassified	root	N/A	13.24 %
Pirellulaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae	0.74 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.74 %

Name	Rank	Taxonomy	Distribution
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	43.38 %
Phycisphaerales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	19.12 %
Unclassified	root	N/A	13.24 %
Anatilimnocola	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Anatilimnocola	0.74 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.74 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_105865530	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	2367	Open in IMG/M
3300001213\|JGIcombinedJ13530_108030573	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	539	Open in IMG/M
3300003324\|soilH2_10426599	All Organisms → cellular organisms → Bacteria	1085	Open in IMG/M
3300004114\|Ga0062593_103164180	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	527	Open in IMG/M
3300004157\|Ga0062590_100868863	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	839	Open in IMG/M
3300004463\|Ga0063356_102479332	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	794	Open in IMG/M
3300004463\|Ga0063356_104003869	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	634	Open in IMG/M
3300004463\|Ga0063356_104289972	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	613	Open in IMG/M
3300005167\|Ga0066672_10654598	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	678	Open in IMG/M
3300005290\|Ga0065712_10249350	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	957	Open in IMG/M
3300005327\|Ga0070658_11831434	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	525	Open in IMG/M
3300005330\|Ga0070690_100578239	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	850	Open in IMG/M
3300005333\|Ga0070677_10891232	Not Available	513	Open in IMG/M
3300005353\|Ga0070669_101213393	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	652	Open in IMG/M
3300005354\|Ga0070675_100316423	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	1378	Open in IMG/M
3300005364\|Ga0070673_101053097	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	759	Open in IMG/M
3300005435\|Ga0070714_101249864	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	725	Open in IMG/M
3300005456\|Ga0070678_102214485	Not Available	521	Open in IMG/M
3300005457\|Ga0070662_100651822	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	888	Open in IMG/M
3300005530\|Ga0070679_101356840	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	657	Open in IMG/M
3300005535\|Ga0070684_101703795	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	595	Open in IMG/M
3300005554\|Ga0066661_10262105	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	1069	Open in IMG/M
3300005561\|Ga0066699_11096756	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	549	Open in IMG/M
3300005843\|Ga0068860_100139387	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	2330	Open in IMG/M
3300006237\|Ga0097621_100827750	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	859	Open in IMG/M
3300006358\|Ga0068871_101019386	Not Available	771	Open in IMG/M
3300006755\|Ga0079222_11500075	Not Available	632	Open in IMG/M
3300006796\|Ga0066665_11532700	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	522	Open in IMG/M
3300006876\|Ga0079217_10565817	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	727	Open in IMG/M
3300006894\|Ga0079215_11283396	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	564	Open in IMG/M
3300006914\|Ga0075436_101474384	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	516	Open in IMG/M
3300006918\|Ga0079216_10786661	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	696	Open in IMG/M
3300007004\|Ga0079218_10640278	All Organisms → cellular organisms → Bacteria	981	Open in IMG/M
3300009177\|Ga0105248_11811386	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	692	Open in IMG/M
3300009510\|Ga0116230_10250634	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	1420	Open in IMG/M
3300009551\|Ga0105238_10927983	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	890	Open in IMG/M
3300009551\|Ga0105238_12230271	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	582	Open in IMG/M
3300009551\|Ga0105238_13064023	Not Available	501	Open in IMG/M
3300009840\|Ga0126313_11830505	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	508	Open in IMG/M
3300010040\|Ga0126308_10734832	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	680	Open in IMG/M
3300010044\|Ga0126310_10529507	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	866	Open in IMG/M
3300010044\|Ga0126310_10951629	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	673	Open in IMG/M
3300010333\|Ga0134080_10142136	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	1013	Open in IMG/M
3300010364\|Ga0134066_10075836	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	925	Open in IMG/M
3300010375\|Ga0105239_12557986	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	595	Open in IMG/M
3300010375\|Ga0105239_13183513	Not Available	534	Open in IMG/M
3300010396\|Ga0134126_10578491	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	1287	Open in IMG/M
3300010400\|Ga0134122_11684377	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	661	Open in IMG/M
3300011119\|Ga0105246_10267354	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	1365	Open in IMG/M
3300012042\|Ga0136627_1305531	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	506	Open in IMG/M
3300012200\|Ga0137382_10272760	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	1176	Open in IMG/M
3300012201\|Ga0137365_10335270	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	1119	Open in IMG/M
3300012212\|Ga0150985_100156684	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	1258	Open in IMG/M
3300012212\|Ga0150985_109161977	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	856	Open in IMG/M
3300012212\|Ga0150985_110490055	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Anatilimnocola	763	Open in IMG/M
3300012212\|Ga0150985_111993702	Not Available	501	Open in IMG/M
3300012212\|Ga0150985_112984710	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	920	Open in IMG/M
3300012212\|Ga0150985_114136825	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	903	Open in IMG/M
3300012212\|Ga0150985_115400459	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	551	Open in IMG/M
3300012212\|Ga0150985_116546384	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	876	Open in IMG/M
3300012212\|Ga0150985_118825493	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	536	Open in IMG/M
3300012212\|Ga0150985_121054608	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	729	Open in IMG/M
3300012356\|Ga0137371_11390281	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	515	Open in IMG/M
3300012469\|Ga0150984_107815996	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	552	Open in IMG/M
3300012469\|Ga0150984_111840806	Not Available	540	Open in IMG/M
3300012469\|Ga0150984_111904196	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	600	Open in IMG/M
3300012469\|Ga0150984_113462460	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	574	Open in IMG/M
3300012469\|Ga0150984_115073406	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	550	Open in IMG/M
3300012469\|Ga0150984_117548480	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	504	Open in IMG/M
3300012469\|Ga0150984_118482765	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	871	Open in IMG/M
3300012469\|Ga0150984_122063306	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	1268	Open in IMG/M
3300013104\|Ga0157370_11442766	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	619	Open in IMG/M
3300013296\|Ga0157374_12455518	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	549	Open in IMG/M
3300013296\|Ga0157374_12893173	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	507	Open in IMG/M
3300013307\|Ga0157372_10661234	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	1216	Open in IMG/M
3300013307\|Ga0157372_13214540	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	521	Open in IMG/M
3300014166\|Ga0134079_10525242	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	575	Open in IMG/M
3300014325\|Ga0163163_11294548	Not Available	791	Open in IMG/M
3300014488\|Ga0182001_10587283	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	532	Open in IMG/M
3300014501\|Ga0182024_10116322	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	3840	Open in IMG/M
3300014502\|Ga0182021_11957061	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	706	Open in IMG/M
3300014502\|Ga0182021_12112877	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	678	Open in IMG/M
3300014968\|Ga0157379_12320324	Not Available	535	Open in IMG/M
3300015245\|Ga0137409_10406377	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	1178	Open in IMG/M
3300015372\|Ga0132256_101754735	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	729	Open in IMG/M
3300017658\|Ga0182738_1382009	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	532	Open in IMG/M
3300018020\|Ga0187861_10323020	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	657	Open in IMG/M
3300018481\|Ga0190271_13331232	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	538	Open in IMG/M
3300020070\|Ga0206356_10306099	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	842	Open in IMG/M
3300020080\|Ga0206350_10486331	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	798	Open in IMG/M
3300020146\|Ga0196977_1162852	Not Available	504	Open in IMG/M
3300020180\|Ga0163155_10268302	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	818	Open in IMG/M
3300021403\|Ga0210397_11489386	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	525	Open in IMG/M
3300021432\|Ga0210384_10358796	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	1313	Open in IMG/M
3300021445\|Ga0182009_10374969	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	731	Open in IMG/M
3300021510\|Ga0222621_1096123	Not Available	628	Open in IMG/M
3300022726\|Ga0242654_10388391	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	533	Open in IMG/M
3300022756\|Ga0222622_10213860	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	1287	Open in IMG/M
3300025310\|Ga0209172_10568695	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	511	Open in IMG/M
3300025906\|Ga0207699_10668441	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	759	Open in IMG/M
3300025909\|Ga0207705_11084850	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	617	Open in IMG/M
3300025923\|Ga0207681_11265310	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	620	Open in IMG/M
3300025925\|Ga0207650_11131664	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	666	Open in IMG/M
3300025926\|Ga0207659_10245070	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	1452	Open in IMG/M
3300025930\|Ga0207701_11723107	Not Available	501	Open in IMG/M
3300025935\|Ga0207709_10815075	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	754	Open in IMG/M
3300025937\|Ga0207669_11835213	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	518	Open in IMG/M
3300025942\|Ga0207689_10593890	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	931	Open in IMG/M
3300025945\|Ga0207679_11035248	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	753	Open in IMG/M
3300025949\|Ga0207667_10421747	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	1358	Open in IMG/M
3300025960\|Ga0207651_11693144	Not Available	570	Open in IMG/M
3300025972\|Ga0207668_11095845	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300025986\|Ga0207658_11021900	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	754	Open in IMG/M
3300026142\|Ga0207698_12130008	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	574	Open in IMG/M
3300027773\|Ga0209810_1123517	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	1121	Open in IMG/M
3300027807\|Ga0209208_10570080	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	516	Open in IMG/M
3300028795\|Ga0302227_10203378	Not Available	766	Open in IMG/M
3300029911\|Ga0311361_11060218	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	669	Open in IMG/M
3300030007\|Ga0311338_11403757	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	650	Open in IMG/M
3300031236\|Ga0302324_102596931	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	616	Open in IMG/M
3300031524\|Ga0302320_11639176	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	624	Open in IMG/M
3300031548\|Ga0307408_102126614	Not Available	541	Open in IMG/M
3300031731\|Ga0307405_12146740	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	502	Open in IMG/M
3300031824\|Ga0307413_11506400	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	595	Open in IMG/M
3300031852\|Ga0307410_11415717	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	611	Open in IMG/M
3300031901\|Ga0307406_11712926	Not Available	557	Open in IMG/M
3300031903\|Ga0307407_10081841	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	1955	Open in IMG/M
3300031903\|Ga0307407_11502726	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	533	Open in IMG/M
3300031938\|Ga0308175_101426435	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	773	Open in IMG/M
3300031995\|Ga0307409_102586663	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	536	Open in IMG/M
3300032002\|Ga0307416_103024026	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	563	Open in IMG/M
3300032002\|Ga0307416_103370212	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	535	Open in IMG/M
3300032005\|Ga0307411_11433895	Not Available	633	Open in IMG/M
3300032012\|Ga0310902_10835668	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	630	Open in IMG/M
3300032515\|Ga0348332_10909903	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	555	Open in IMG/M
3300034644\|Ga0370548_142256	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	513	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	54.41%
Environmental	Environmental	45.59%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	54.41%
Terrestrial	Environmental → Terrestrial	40.44%
Aquatic	Environmental → Aquatic	5.15%

Habitat	Taxonomy	Distribution
Rhizosphere	Host-Associated → Plants → Rhizosphere	36.76%
Soil	Environmental → Terrestrial → Soil	36.03%
Rhizoplane	Host-Associated → Plants → Rhizoplane	13.97%
Peat	Environmental → Terrestrial → Peat	3.68%
Freshwater	Environmental → Aquatic → Freshwater	2.21%
Roots	Host-Associated → Plants → Roots	2.21%
Sediment	Environmental → Aquatic → Sediment	1.47%
Peat Moss	Host-Associated → Plants → Peat Moss	1.47%
Marine	Environmental → Aquatic → Marine	0.74%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.74%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	29.41%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	19.12%
Soil	Host-Associated → Plants → Rhizosphere → Soil	17.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	8.09%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.15%
Loam	Environmental → Terrestrial → Soil → Loam	3.68%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.68%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.21%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	2.21%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.47%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	1.47%
Lake	Environmental → Aquatic → Freshwater → Lake	0.74%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.74%
Ice	Environmental → Aquatic → Freshwater → Ice	0.74%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.74%
Sediment	Environmental → Aquatic → Thermal Springs → Sediment	0.74%
Sand	Environmental → Terrestrial → Soil → Sand	0.74%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.74%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	19.12%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	17.65%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.44%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	8.09%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.15%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.41%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.68%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.68%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.21%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.21%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	2.21%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.47%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.47%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	1.47%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.74%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.74%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.74%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.74%
Unclassified	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified	0.74%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.74%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.74%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	8.09%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	7.35%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	5.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	5.15%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.68%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.94%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.94%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.21%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.21%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.21%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	2.21%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.21%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.47%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.47%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.47%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.47%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.47%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.47%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.47%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	1.47%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.47%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	1.47%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.47%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.47%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.47%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.47%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	1.47%
Freshwater Microbial Mat	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat	0.74%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.74%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.74%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	0.74%
Hot Spring Sediment	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment	0.74%
Compost	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Compost	0.74%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.74%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.74%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.74%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.74%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.74%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.74%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.74%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.74%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.74%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.74%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009510	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fd - Sphagnum fallax MG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012042	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ489 (22.06)	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014488	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300017658	Enriched Miracle-Growth compost microbial communities from Emeryville, California, USA - eDNA 5th pass 30_C BE-Lig MG (version 2)	Environmental	Open in IMG/M
3300018020	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_100	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020080	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020146	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_10-13C	Environmental	Open in IMG/M
3300020180	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.SP4.G1	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300021510	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coex	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025310	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027773	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027807	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fd - Sphagnum fallax MG (SPAdes)	Host-Associated	Open in IMG/M
3300028795	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_1	Environmental	Open in IMG/M
3300029911	III_Bog_N2 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300034644	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_123 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1058655305	3300000364	Soil	FGQPPQIQHTIVCKAPAGKAISYYPDELTVEGKLKVEEKKDDGFIISIFELDVSSVKPAVK*
JGIcombinedJ13530_1080305731	3300001213	Wetland	PQIQHTIVCNTPRGKAVSYYPDEITVEGDLKVAEKKDEGFIVSIFEVQVSSVKPAAR*
soilH2_104265991	3300003324	Sugarcane Root And Bulk Soil	QPPQIQHQIVVHTPKGKAVGYFPDEIVVEGTLVVNEKKEDGLVISVFEVNCNSVKPMAK*
Ga0062593_1031641802	3300004114	Soil	VSYFPDEIAVEGTLKVDEKKEDGFIVSIFEMECSSVKPVAK*
Ga0062590_1008688631	3300004157	Soil	GQPPQIQHTVVVNCPKGKAVSYYPDEIVVEGKLNVEEKKDDGFIVSIFEVEVNSVKPAAK
Ga0063356_1024793321	3300004463	Arabidopsis Thaliana Rhizosphere	KSVSYFPDEIEVAGTLKVDEKKDEGFIVSIFEIECSSVKPSK*
Ga0063356_1040038691	3300004463	Arabidopsis Thaliana Rhizosphere	VATTPPGKSVTYYPDELVVEGTLAVQEKKEDGFIISLFEMQVSSVKPTAK*
Ga0063356_1042899721	3300004463	Arabidopsis Thaliana Rhizosphere	KGKSVSYYPDELVVEGKLKVQEIKDEGFIVSIFQMDVTSVKPAAK*
Ga0066672_106545981	3300005167	Soil	KAVGYFPDEIIVEGTLKVDEKKEDGLIVSVFEMDCNSVKPMAK*
Ga0065712_102493503	3300005290	Miscanthus Rhizosphere	TVICKAPTGKAVGYYPDELVVEGKLKVEEKKDEGFIVSVFELEAASVKPATK*
Ga0070658_118314342	3300005327	Corn Rhizosphere	QIQHQIVVHTPKGKAVGYYPDEIVCEGTLKVEEKKDDGYIVSVFEMDVQSVKPAAK*
Ga0070690_1005782391	3300005330	Switchgrass Rhizosphere	QVQHTIVCATPKGKSVSYYPDEISVEGTLKVAEKRDEGFIVSVFEMDVNSVKPAVK*
Ga0070677_108912321	3300005333	Miscanthus Rhizosphere	GKAVSYYPDELVVEGTLKVDEKKEDGFIVSLFEMQVSSVKPAAK*
Ga0070669_1012133931	3300005353	Switchgrass Rhizosphere	GKAVGYSPDEIVVEGKLNVDEKKDDGYIISLFEVTVTSVKAAPK*
Ga0070675_1003164231	3300005354	Miscanthus Rhizosphere	QPPQVQHTIVVHLPQGKGVSYFPDEITVQGKLTVDEKKEDGFIVSVFEVEASSVKPAAK*
Ga0070673_1010530971	3300005364	Switchgrass Rhizosphere	PQIQHTVICKAPTGKAVGYYPDELVVEGKLKVEEKKDEGFIVSVFELEAASVKPATK*
Ga0070714_1012498642	3300005435	Agricultural Soil	QIQHTIVANCPKGKAVSYVPDEIVVEGKLHVEEKKDDGYIVSIFEVGVSSVKPAPK*
Ga0070678_1022144851	3300005456	Miscanthus Rhizosphere	IVVHLPQGKGVSYFPDEITVQGKLTVDEKKEDGFIVSVFEVEASSVKPAAK*
Ga0070662_1006518221	3300005457	Corn Rhizosphere	TIVVTCPKGKSLAYVPDEITVQGKLTVQEKKDDGYVISLFELGADSVKVVK*
Ga0070679_1013568402	3300005530	Corn Rhizosphere	CPAGKAVAYYPDEITVEGTLKVQEKKDDGFIISIFEMNASSVKPAAK*
Ga0070684_1017037952	3300005535	Corn Rhizosphere	VVSTPKGKAVSYYPDEIVCEGTLKVEEKKDDGYIVSVFEMDVQSVKPAAK*
Ga0066661_102621051	3300005554	Soil	VGYFPDEIIVEGTLKVDEKKEDGLIVSVFEMDCNSVKPMAK*
Ga0066699_110967562	3300005561	Soil	QIVVHCPKGKAVSYFPDEIICEGTLKVEEKKDDGYIVSVFEMEVNSVKPAAK*
Ga0068860_1001393871	3300005843	Switchgrass Rhizosphere	DELQIEGKLTVEEKKEDDVITSIYEVQTSSVKPAAK*
Ga0097621_1008277502	3300006237	Miscanthus Rhizosphere	IQHMVVASCPPGKAVGYSPDEIVVEGKLNVEEKKDDGYIISIFEVTVTSVKAAPK*
Ga0068871_1010193863	3300006358	Miscanthus Rhizosphere	DEIVCEGTLKVEEKKDDGYIVSVFELDVQSVKPAAK*
Ga0079222_115000752	3300006755	Agricultural Soil	VHCPKGKAVSYFPDEITVEGTLKVEEKKDDGYIVSVFEIDASSVKPAPK*
Ga0066665_115327002	3300006796	Soil	LLVEGKLKVEEKKDDGFIVSIFEVDVTSVKPAAK*
Ga0079217_105658171	3300006876	Agricultural Soil	QCALVPSMFACCLGQASQVQHTSIVNTPKGEAVSYFPEEIIVEGVLRVNEKKEDGLVISVFEMECMSVKPAPK*
Ga0079215_112833962	3300006894	Agricultural Soil	APAGKAVGYYPDELVVEGKLKVEEKKDDGFIISVFEIDVTSVKPAVK*
Ga0075436_1014743841	3300006914	Populus Rhizosphere	PQVQHTVVVNCPKGKAVSYCPEELVIEGKLSVDEKKDDGFVTSIFQVDVTSVKPAPK*
Ga0079216_107866611	3300006918	Agricultural Soil	DEILVEGKLKVEEKKDEGYVISLFEMEVGSVKMAPK*
Ga0079218_106402781	3300007004	Agricultural Soil	QPPQVQHTIVCKAPAGKSISYYPDELTVEGKLKVEEKKDEGFIVSVFEIEAVSVKPAAK*
Ga0105248_118113862	3300009177	Switchgrass Rhizosphere	ITVEGTLKVDEKKDEGFVISLFEIDCTSVKPAAK*
Ga0116230_102506344	3300009510	Host-Associated	VVTCPKGKAVSYYPDEIIVQGKLTVQVQKDDGFIVAIFAMEASSVKPAPK*
Ga0105238_109279832	3300009551	Corn Rhizosphere	QHQIVVHTPKGKAVGYYPDEIICEGTLKVEEKKDDGSIVSVFEMDVQSVKPAAK*
Ga0105238_122302712	3300009551	Corn Rhizosphere	KGKAVGYYPDEIVCEGTLKVEEKKDDGYIVSVFELDVQSVKPAAK*
Ga0105238_130640231	3300009551	Corn Rhizosphere	KAVSYFADEILVEGKLKVEEKKDDGFIVSVFEVDISSVKPAPK*
Ga0126313_118305051	3300009840	Serpentine Soil	PDEILVEGKLNVEEKKDDGYIISIFEVSVSSVKAAPR*
Ga0126308_107348322	3300010040	Serpentine Soil	YFPDEIVVEGNLVVNEKKEDGVVISVFEVNCLSVKPMAK*
Ga0126310_105295072	3300010044	Serpentine Soil	YYPDEIVCEGTLKVEEKKDDGYIISVFEMDVLSVKPAAK*
Ga0126310_109516291	3300010044	Serpentine Soil	GKAVSYFPDEINVEGKLKVEEKKEDGFIVSIFEIVCDSVKPVAK*
Ga0134080_101421363	3300010333	Grasslands Soil	CPTGKAVSYSPDEILVEGKLNVEEKKDDGYIISIFEVSVTSVKAAPR*
Ga0134066_100758363	3300010364	Grasslands Soil	QPPQVQHTMVVHTPKGKAVGYFPDEIIVEGTLVVNEKKEDGIIVSVFEVNCNSVKPMAK*
Ga0105239_125579862	3300010375	Corn Rhizosphere	ANCPKGKAVPYTPDELQVEGIIKVQEKKDDGYIISVFEMEVSSVKLAPKG*
Ga0105239_131835132	3300010375	Corn Rhizosphere	YPDEIICEGTLKVDEKKDDGYIVSVFEMDVQSVKPAAK*
Ga0134126_105784911	3300010396	Terrestrial Soil	NITQFALVPSLFSCCQFGQPPQIQHTIVAACPKGKAVGYCPDEIVIEGALKVQEKKEDGYIVSIFELEVSSVKPAPK*
Ga0134122_116843772	3300010400	Terrestrial Soil	VSYFPDEINVEGKLKVEEKKEDGFIVSIFEIECSSVKPVAK*
Ga0105246_102673543	3300011119	Miscanthus Rhizosphere	YFPDEIVCEGILKVEEKKDDGYIVSVFEMDVQSVKPAAK*
Ga0136627_13055311	3300012042	Polar Desert Sand	AYYPDQLVVEGKLNVEEKKDEGFIISIFEVEVANVQPAAK*
Ga0137382_102727601	3300012200	Vadose Zone Soil	PPQVQHTMVVHTPKGKAVGYFPDEIVVEGTLKVDEKKEDGLIISVFEVDCLSVKPMAK*
Ga0137365_103352701	3300012201	Vadose Zone Soil	GKAVGYFPDEIIIEGNLVVNEKKEDGIIVSVFEVNCNSVKPMAK*
Ga0150985_1001566841	3300012212	Avena Fatua Rhizosphere	PQIQHMVVANCPQGKAVGYSPDEILVEGKLNVEEKKDDGYIISIFEVSVSSVKAAPR*
Ga0150985_1091619771	3300012212	Avena Fatua Rhizosphere	YFADEILVEGKLKVEERKDDGFIVSVFEVDISSVKPAPK*
Ga0150985_1104900551	3300012212	Avena Fatua Rhizosphere	NCPKGKAVGYSPDELLVEGTLKVEEKKDEGYVVSVFEMQVNSVKLAPK*
Ga0150985_1119937021	3300012212	Avena Fatua Rhizosphere	EIWVEGTLKVDEKKEDGFILSIFEVDVSSVKPAPK*
Ga0150985_1129847101	3300012212	Avena Fatua Rhizosphere	CPKGKAVGYVPDEIVVEGILKVQEKKDDGYVVSIFDMEITSVKPAPK*
Ga0150985_1141368252	3300012212	Avena Fatua Rhizosphere	SYFPDEIQVEGTLKVNEKKEDGFIVSIFEMDCQSVKPAAR*
Ga0150985_1154004592	3300012212	Avena Fatua Rhizosphere	FPDEIQVEGTLKVDEKKEDGFIVSIFEMDCQSVKPAAR*
Ga0150985_1165463842	3300012212	Avena Fatua Rhizosphere	SNCPKGKAVSYCPDEIVVEGNLKVQEKKDDGYVVSLFEMEVTSVKPAAK*
Ga0150985_1188254931	3300012212	Avena Fatua Rhizosphere	QHTIVVSCPKGKAVGYSPDEIVCEGTLKVQEKKDDGYIVSLFEMEVISVKPAPK*
Ga0150985_1210546082	3300012212	Avena Fatua Rhizosphere	FASCVGQAPQIQHMVVVHTPKGKAVPYFPDEITCEGTIKVEERKDDGYIVSVFEMDVTSVKPTAK*
Ga0137371_113902811	3300012356	Vadose Zone Soil	YSPDEILVEGKLNVEEKKDDGYIISIFEVSVSSVKAAPR*
Ga0150984_1078159961	3300012469	Avena Fatua Rhizosphere	KGKNVSYYPDEISVEGKLTVDEKKEDGFIVSIFEVECSSVKPAAK*
Ga0150984_1118408062	3300012469	Avena Fatua Rhizosphere	AVSYYPDEITVEGNLKVAEKKDEGFIISIFEMEVTSVKPSSK*
Ga0150984_1119041961	3300012469	Avena Fatua Rhizosphere	IVCEGTLKVDEKKDDGYIVSVFEMDVQSVKPAAK*
Ga0150984_1134624602	3300012469	Avena Fatua Rhizosphere	IVVNCPKGKAVGYYPDEITVEGSLKVAEKKDEGFIISIFEIDVSSVKPSAK*
Ga0150984_1150734061	3300012469	Avena Fatua Rhizosphere	SLFACCVGQPPQIQHQVVVHTPKGKSVGYFPDEIVCEGTLKVDEKKDDGYIVSVFEMDVQSVKPAAK*
Ga0150984_1175484802	3300012469	Avena Fatua Rhizosphere	PPQIQHTIVVNCPKGKSVGYCPDEIVVEGTLKVDEKKDDGYVVSLFEMQVSSVKPAPK*
Ga0150984_1184827652	3300012469	Avena Fatua Rhizosphere	RCFGQPPQIQHMVVASCPDGKAVSYSPDEIVVEGKLNVDEKKDDGYIISIFEVSVTSVKAAPR*
Ga0150984_1220633063	3300012469	Avena Fatua Rhizosphere	DEISVEGKLIVDEKKEDGFIVSLFEIDATSVKPATK*
Ga0157370_114427662	3300013104	Corn Rhizosphere	FPDEIEVSGKLTVEEKKDEGFIVSIFEVECSSVKPVGK*
Ga0157374_124555181	3300013296	Miscanthus Rhizosphere	IVVHTPKGTAVGYYPDEIICEGTLKVDEKKDDGYIVSVFEMDVQSVKPAAK*
Ga0157374_128931732	3300013296	Miscanthus Rhizosphere	QLQHMVVATCPPGKAVGYSPDEIVVEGKLNVEEKKDDGYIISIFEVTVTSVKAAPK*
Ga0157372_106612341	3300013307	Corn Rhizosphere	KGKSVSYYPDEIEVSGALKVDEKKDEGFIVSIFEVECSSVKPVGK*
Ga0157372_132145401	3300013307	Corn Rhizosphere	KAVGYTADEILVEGTLKVQQKKDDGYIISVFEMEVSSVKLAPQG*
Ga0134079_105252421	3300014166	Grasslands Soil	CFGQPPQIQHTIVVHVPKGKAVSYYPEEIMVEGKLTVDEKKEDGFIVSLFEMDCSSVKPSVK*
Ga0163163_112945481	3300014325	Switchgrass Rhizosphere	EQITVEGKLKVEEKKDDGFIVSIFEVSCTSVKPSPK*
Ga0182001_105872832	3300014488	Soil	GQPPQIQHTVVANCPKGKAVGYFPDELVVEGKLKVEEKKDDGYIVSVFEMEVSSVKVAAK
Ga0182024_101163225	3300014501	Permafrost	DEIVVEGALKVEEKKDDGYIVSIFQLETSSVKPAPK*
Ga0182021_119570612	3300014502	Fen	FGQPPQVQHTVVVNCPKGKAVSYYPDQITVEGTLKVAERRDEGFIVSLFEVQVLSVKPSGK*
Ga0182021_121128771	3300014502	Fen	AVSYYPDEITVEGNLKVAEKRDEGFIVSIFEVQVTSVKPSPR*
Ga0157379_123203241	3300014968	Switchgrass Rhizosphere	PQVQHTIVCKAPSGKSVSYYPDELVVEGKLKVEEKKDDGFIVSIFEVDVTSVQPATK*
Ga0137409_104063773	3300015245	Vadose Zone Soil	QVQHTMVVRTPKGKAVGYFPDEIVVEGALRVDEKKEDGLIVSVFEIDCTSVKPMAK*
Ga0132256_1017547351	3300015372	Arabidopsis Rhizosphere	KAVSYYPDEIVVEGKLLVDEKKEDGFIVSIFEVDCSSVKPAAK*
Ga0182738_13820092	3300017658	Compost	GQPPQIQHTVLVQTPKGKAVSYCPDEISVEGKLTVREKKEDGFIISIFELEAGSVKPVAP
Ga0187861_103230201	3300018020	Peatland	TLVVRTPKGKAVSYFPDEILIEGTLTVKERTEDGMVVSLFEIACTSVKPAPAQKP
Ga0190271_133312321	3300018481	Soil	TIVVHVVGGKSVSYYPDEIVVEGKLIVEEKKEDGFIVSIFEMESSKVQSAAK
Ga0206356_103060992	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	FGQPPQIQHTIVANCPKGKALSYVPDEIVVEGKLHVEEKKDDGYIVSIFEVGVSSVKPAP
Ga0206350_104863311	3300020080	Corn, Switchgrass And Miscanthus Rhizosphere	NCPKGKAVSYVPDEIVVEGKLHVEEKKDDGYIVSIFEVGVSSVKPAPK
Ga0196977_11628521	3300020146	Soil	PQVQHTLVVHAPKGKAVTYYPDEIYVEGELKVNEKKEDGIIVSVFEVNCTSVKPTPK
Ga0163155_102683022	3300020180	Freshwater Microbial Mat	VSYYGDEIIVDGVLNVEEKKDDGYIVSVFEITCNSVRPAPR
Ga0210397_114893862	3300021403	Soil	NCPKGKAVNYYQDEIIVEGYLTVQEKKDDGFIISIYDMECTSVKPAPK
Ga0210384_103587961	3300021432	Soil	VNCPKGKAVSYCPDEIFVEGDLKVDEKRDDGYVVSIFELTAKSVKPAPGAGK
Ga0182009_103749692	3300021445	Soil	PDEIEVSGTLKVDEKKDEGFIVSIFEVECSSVKPVGK
Ga0222621_10961232	3300021510	Groundwater Sediment	KAVSYFPDEITVEGKLKVEEKKDDGFIVSIFEIACTSVKPAAK
Ga0242654_103883911	3300022726	Soil	QPPQIQHTIVVNCPKGKALAYCPDEILVQGGLTVQEKRDDGYVISIFEVRADSVKVAK
Ga0222622_102138603	3300022756	Groundwater Sediment	DELVVEGKLKVEEKKDDGFIVSVFEVDVSSVKPAVK
Ga0209172_105686951	3300025310	Hot Spring Sediment	QHTVIVHCPKGKAVSYYPDEIIVQGTLNVQEKKDEGFIVSIFELEASSVKPAAK
Ga0207699_106684411	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	HTIVADCPKGKAVGYVPDEIVVEGTLNVAEKKDDGYIVSIFEVNVSSVKPAPK
Ga0207705_110848501	3300025909	Corn Rhizosphere	QIVVHTPKGKAVGYYPDEIICEGTLKVDEKKDDGYIVSVFEMDVQSVKPAAK
Ga0207681_112653102	3300025923	Switchgrass Rhizosphere	IQHTIIVNCPKGKAVSYYPDEISVEGKLKVEEKKDDGFIVSIFDIECMSVKPVAK
Ga0207650_111316642	3300025925	Switchgrass Rhizosphere	YPDELMVEGKLKVEEKKDDGFIVSVFEVDVSSVKPAVK
Ga0207659_102450703	3300025926	Miscanthus Rhizosphere	QHTIVVHLPQGKGVSYFPDEITVQGKLTVDEKKEDGFIVSVFEVEASSVKPAAK
Ga0207701_117231071	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	VCATPKGKSVTYYPDELVVEGTLKVEEKKDEGFIVSVFEMEVSSVKPAAK
Ga0207709_108150752	3300025935	Miscanthus Rhizosphere	PDEILVEGKLNVEEKKDDGYIISIFEVTVSSVKAAPR
Ga0207669_118352132	3300025937	Miscanthus Rhizosphere	SGKAVSYSPDEILVEGKLNVEEKKDDGYIISIFEVSVSSVKAAPR
Ga0207689_105938903	3300025942	Miscanthus Rhizosphere	CPKGKAVSYYPDEIVVEGKLNVEEKKDDGFIVSIFEVEVNSVKPAAK
Ga0207679_110352481	3300025945	Corn Rhizosphere	PDDIGVEGKLNVEEKKDDGYIISIFEVTVTSVKAAPK
Ga0207667_104217471	3300025949	Corn Rhizosphere	PQIQHTIVVTCPKGKSLAYVPDEITVQGKLTVQEKKDDGYVISIFEMGADSVKVAK
Ga0207651_116931442	3300025960	Switchgrass Rhizosphere	HTVVCKAPAGKAVGYYPDELVVEGKLKVEEKKDEGFIVSVFELEAASVKPATK
Ga0207668_110958451	3300025972	Switchgrass Rhizosphere	GQPPQIQHVIIVDCPAGKAVSYYPDELVVEGKLTVDEKKDDDIITSIFQVQTSSVKPAAK
Ga0207658_110219002	3300025986	Switchgrass Rhizosphere	SCPKGKAVGYSPDEIVCEGTLKVQEKKDDGYIVSLFEMEVISVKPAPK
Ga0207698_121300082	3300026142	Corn Rhizosphere	YYPDEIICEGTLKVDEKKDDGYIVSVFEMDVQSVKPAAK
Ga0209810_11235173	3300027773	Surface Soil	KAVDYCPDEIVVEGELKVDEKKDDGFVVSLFEVTAASVKPAPK
Ga0209208_105700802	3300027807	Host-Associated	PPQIQHTIVVTCPKGKAVSYYPDEIIVQGKLTVQVQKDDGFIVAIFAMEASSVKPAPK
Ga0302227_102033782	3300028795	Palsa	KGKAISYFPDQIVVEGTLKVEENKDEGYIISIFEIDAKSVKPAPK
Ga0311361_110602181	3300029911	Bog	NCCYGQPPQVQHTIVVTCPKGKAVSYYPDEIVVEGKLNVDVMKDDGFVVGIFSVETTSVKPAPK
Ga0311338_114037572	3300030007	Palsa	AVSYYPDEIVVQGKLTVEEKKDDGFIVSLFEVEANSVKPAAK
Ga0302324_1025969311	3300031236	Palsa	YPDEIVVQGKLTVEEKKDDGFIVSLFEVEANSVKPAAK
Ga0302320_116391762	3300031524	Bog	DEISVEGTLHVEEKKEDGFIVSIFEVDTTSVKPAPK
Ga0307408_1021266142	3300031548	Rhizosphere	CQEGKAVSYFPEQIQVEGKLKVEEKKDDGFIVSIFEVTCTSVKPAPK
Ga0307405_121467402	3300031731	Rhizosphere	VQHSIIVSCQEGKAVSYFPEQIQVEGKLKVEEKKDDGFIVSIFEVTCTSVKPAPK
Ga0307413_115064002	3300031824	Rhizosphere	YSPDEIVVEGKLNVEEKKDDGYIISIFEVTVSSVKSAPR
Ga0307410_114157172	3300031852	Rhizosphere	AVSYYPDELVVEGKLKVEEKKEDGFIVSLFELEVASVKPAAK
Ga0307406_117129261	3300031901	Rhizosphere	SCQDGKAVSYFPEQIQVEGKLKVEEKKDDGFIVSIFEVTCTSVKPAPK
Ga0307407_100818413	3300031903	Rhizosphere	IVASCPPGKSVTYYPDELVVEGTLKVQEKKEDGFIISLFEMQVSSVKPTAK
Ga0307407_115027261	3300031903	Rhizosphere	TIVANCPKGKAVGYSADEIVVEGTLKVQEKKDDGYLISVFEMEVSSVKMAPK
Ga0308175_1014264352	3300031938	Soil	DEIICEGTLKVDEKKDDGYIVSVFEMDVQSVKPAAK
Ga0307409_1025866631	3300031995	Rhizosphere	TIVVNCPKGKAVSYYPDEIVVEGVLKVEEKKEDGFIVSVFEMDVNSVKPAAK
Ga0307416_1030240261	3300032002	Rhizosphere	YPDEIQVEGTLKVQEKRDEGFIVSVFEMNVASVKPAVK
Ga0307416_1033702122	3300032002	Rhizosphere	SPDEIVVEGKLNVEEKKDDGYIVSLFEVSVSSVKAAPR
Ga0307411_114338951	3300032005	Rhizosphere	QHSVTVVCPPGKAVNYYPEEILVEGTLKVDEKKEDGFILSIFEVDVSSVKPAPK
Ga0310902_108356682	3300032012	Soil	MVVANCPQGKAVGYSPDEIVVEGKLNVEEKKDDGYIISIFEVTVSSVKAAPR
Ga0348332_109099031	3300032515	Plant Litter	PQVQHTVVVNCPKGKAVSYYQDEIIVEGFLTVEEKKDDGFIVSIFDMECTSVKPAPK
Ga0370548_142256_362_511	3300034644	Soil	CKAPNGKAVGYYPDELVVEGKLKVEEKKDDGFIVSVFEVDVSSVKPAVK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F057460

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences