Metagenome Family F057483

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F057483
Family Type	Metagenome
Number of Sequences	136
Average Sequence Length	73 residues
Representative Sequence	MRWPPRFGHAHEAWPGITISGIVILAAAVIADAFGEPPQGGPRLHVGLAIGFAVLVLGYVLRRFERRDRGDGNAP
Number of Associated Samples	109
Number of Associated Scaffolds	136

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	26.47 %
% of genes near scaffold ends (potentially truncated)	22.79 %
% of genes from short scaffolds (< 2000 bps)	86.03 %
Associated GOLD sequencing projects	105
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.529 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (9.559 % of family members)
Environment Ontology (ENVO)	Unclassified (19.118 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (36.029 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 46.60% β-sheet: 0.00% Coil/Unstructured: 53.40%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 136 Family Scaffolds
PF13594	Obsolete Pfam Family	12.50
PF02673	BacA	8.09
PF07681	DoxX	8.09
PF01523	PmbA_TldD	4.41
PF01979	Amidohydro_1	3.68
PF01026	TatD_DNase	2.94
PF13561	adh_short_C2	2.21
PF01556	DnaJ_C	2.21
PF07690	MFS_1	1.47
PF07995	GSDH	0.74
PF04392	ABC_sub_bind	0.74
PF05960	DUF885	0.74
PF00158	Sigma54_activat	0.74
PF00512	HisKA	0.74
PF00326	Peptidase_S9	0.74
PF11160	Hva1_TUDOR	0.74
PF01546	Peptidase_M20	0.74
PF02518	HATPase_c	0.74

COG ID	Name	Functional Category	% Frequency in 136 Family Scaffolds
COG1968	Undecaprenyl pyrophosphate phosphatase	Lipid transport and metabolism [I]	8.09
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	8.09
COG4270	Uncharacterized membrane protein	Function unknown [S]	8.09
COG0312	Zn-dependent protease PmbA/TldA or its inactivated homolog	General function prediction only [R]	4.41
COG0484	DnaJ-class molecular chaperone with C-terminal Zn finger domain	Posttranslational modification, protein turnover, chaperones [O]	2.21
COG2133	Glucose/arabinose dehydrogenase, beta-propeller fold	Carbohydrate transport and metabolism [G]	0.74
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.74
COG4805	Uncharacterized conserved protein, DUF885 family	Function unknown [S]	0.74

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.53 %
Unclassified	root	N/A	1.47 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.53 %
Unclassified	root	N/A	1.47 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.53 %
Unclassified	root	N/A	1.47 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	32.35 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	26.47 %
Unclassified	root	N/A	1.47 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	32.35 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.68 %
Unclassified	root	N/A	1.47 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.74 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	32.35 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.47 %
Unclassified	root	N/A	1.47 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.74 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	29.41 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.47 %
Unclassified	root	N/A	1.47 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.74 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	28.68 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.47 %
Unclassified	root	N/A	1.47 %
Candidatus Rokubacteria bacterium RIFCSPLOWO2_12_FULL_71_22	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium RIFCSPLOWO2_12_FULL_71_22	0.74 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.74 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_104670728	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105727952	All Organisms → cellular organisms → Bacteria → Proteobacteria	2130	Open in IMG/M
3300000550\|F24TB_10785412	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1418	Open in IMG/M
3300000891\|JGI10214J12806_10084127	All Organisms → cellular organisms → Bacteria → Proteobacteria	707	Open in IMG/M
3300004058\|Ga0055498_10132441	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	532	Open in IMG/M
3300004157\|Ga0062590_100506291	All Organisms → cellular organisms → Bacteria	1031	Open in IMG/M
3300004463\|Ga0063356_100061523	All Organisms → cellular organisms → Bacteria → Proteobacteria	3851	Open in IMG/M
3300004479\|Ga0062595_101985264	All Organisms → cellular organisms → Bacteria → Proteobacteria	561	Open in IMG/M
3300004479\|Ga0062595_102621599	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	506	Open in IMG/M
3300004633\|Ga0066395_10374892	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	796	Open in IMG/M
3300005093\|Ga0062594_103155043	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300005166\|Ga0066674_10174267	All Organisms → cellular organisms → Bacteria	1020	Open in IMG/M
3300005180\|Ga0066685_10689756	All Organisms → cellular organisms → Bacteria → Proteobacteria	701	Open in IMG/M
3300005183\|Ga0068993_10386953	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300005328\|Ga0070676_11525770	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300005330\|Ga0070690_100691868	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300005332\|Ga0066388_101464846	All Organisms → cellular organisms → Bacteria	1191	Open in IMG/M
3300005332\|Ga0066388_101884804	All Organisms → cellular organisms → Bacteria	1067	Open in IMG/M
3300005340\|Ga0070689_100272846	All Organisms → cellular organisms → Bacteria	1401	Open in IMG/M
3300005440\|Ga0070705_100695615	All Organisms → cellular organisms → Bacteria	798	Open in IMG/M
3300005446\|Ga0066686_10447684	All Organisms → cellular organisms → Bacteria	882	Open in IMG/M
3300005529\|Ga0070741_10168620	All Organisms → cellular organisms → Bacteria → Proteobacteria	2172	Open in IMG/M
3300005545\|Ga0070695_101404789	All Organisms → cellular organisms → Bacteria → Proteobacteria	579	Open in IMG/M
3300005546\|Ga0070696_100995987	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300005546\|Ga0070696_101107887	All Organisms → cellular organisms → Bacteria → Proteobacteria	666	Open in IMG/M
3300005549\|Ga0070704_101683254	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300005713\|Ga0066905_101420329	All Organisms → cellular organisms → Bacteria	629	Open in IMG/M
3300005713\|Ga0066905_101515405	Not Available	611	Open in IMG/M
3300005764\|Ga0066903_100092043	All Organisms → cellular organisms → Bacteria → Proteobacteria	4037	Open in IMG/M
3300005842\|Ga0068858_101124972	All Organisms → cellular organisms → Bacteria	771	Open in IMG/M
3300005843\|Ga0068860_102845798	All Organisms → cellular organisms → Bacteria → Proteobacteria	501	Open in IMG/M
3300006196\|Ga0075422_10353049	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300006845\|Ga0075421_100154224	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2869	Open in IMG/M
3300006845\|Ga0075421_100523260	All Organisms → cellular organisms → Bacteria	1406	Open in IMG/M
3300006847\|Ga0075431_100304051	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1611	Open in IMG/M
3300006881\|Ga0068865_101637484	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300006904\|Ga0075424_100990364	All Organisms → cellular organisms → Bacteria → Proteobacteria	896	Open in IMG/M
3300006904\|Ga0075424_102565023	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	533	Open in IMG/M
3300009012\|Ga0066710_100138324	All Organisms → cellular organisms → Bacteria	3360	Open in IMG/M
3300009100\|Ga0075418_10210649	All Organisms → cellular organisms → Bacteria	2069	Open in IMG/M
3300009137\|Ga0066709_100968047	All Organisms → cellular organisms → Bacteria	1244	Open in IMG/M
3300009137\|Ga0066709_102855711	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300009147\|Ga0114129_10121101	All Organisms → cellular organisms → Bacteria	3601	Open in IMG/M
3300009147\|Ga0114129_12298045	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	647	Open in IMG/M
3300009162\|Ga0075423_11467314	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	731	Open in IMG/M
3300009162\|Ga0075423_12281541	All Organisms → cellular organisms → Bacteria → Proteobacteria	589	Open in IMG/M
3300009177\|Ga0105248_11594589	All Organisms → cellular organisms → Bacteria → Proteobacteria	739	Open in IMG/M
3300009444\|Ga0114945_10001370	All Organisms → cellular organisms → Bacteria → Proteobacteria	15218	Open in IMG/M
3300009553\|Ga0105249_12167386	All Organisms → cellular organisms → Bacteria	629	Open in IMG/M
3300009792\|Ga0126374_11478439	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	556	Open in IMG/M
3300009817\|Ga0105062_1035173	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	885	Open in IMG/M
3300009818\|Ga0105072_1012074	All Organisms → cellular organisms → Bacteria	1531	Open in IMG/M
3300009819\|Ga0105087_1091042	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	557	Open in IMG/M
3300009822\|Ga0105066_1050369	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	873	Open in IMG/M
3300009873\|Ga0131077_10672076	All Organisms → cellular organisms → Bacteria	924	Open in IMG/M
3300009873\|Ga0131077_10676981	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	920	Open in IMG/M
3300010047\|Ga0126382_10382419	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1091	Open in IMG/M
3300010047\|Ga0126382_12522341	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	502	Open in IMG/M
3300010358\|Ga0126370_11527973	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	636	Open in IMG/M
3300010360\|Ga0126372_10572587	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1077	Open in IMG/M
3300010362\|Ga0126377_10350377	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium RIFCSPLOWO2_12_FULL_71_22	1473	Open in IMG/M
3300010362\|Ga0126377_10570014	All Organisms → cellular organisms → Bacteria	1173	Open in IMG/M
3300010362\|Ga0126377_11585334	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	729	Open in IMG/M
3300010398\|Ga0126383_10549412	All Organisms → cellular organisms → Bacteria → Proteobacteria	1220	Open in IMG/M
3300010398\|Ga0126383_11145915	All Organisms → cellular organisms → Bacteria → Proteobacteria	867	Open in IMG/M
3300010398\|Ga0126383_11640629	All Organisms → cellular organisms → Bacteria → Proteobacteria	732	Open in IMG/M
3300010399\|Ga0134127_11346830	All Organisms → cellular organisms → Bacteria	784	Open in IMG/M
3300010401\|Ga0134121_10455834	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1168	Open in IMG/M
3300010938\|Ga0137716_10116024	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1949	Open in IMG/M
3300012971\|Ga0126369_11337179	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	806	Open in IMG/M
3300012971\|Ga0126369_12917890	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	560	Open in IMG/M
3300014308\|Ga0075354_1127598	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	559	Open in IMG/M
3300014318\|Ga0075351_1064469	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	714	Open in IMG/M
3300014968\|Ga0157379_11395889	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300015371\|Ga0132258_10563377	All Organisms → cellular organisms → Bacteria	2857	Open in IMG/M
3300015373\|Ga0132257_102247011	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300015373\|Ga0132257_102550154	All Organisms → cellular organisms → Bacteria → Proteobacteria	664	Open in IMG/M
3300015374\|Ga0132255_102771112	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300016387\|Ga0182040_10386911	All Organisms → cellular organisms → Bacteria	1094	Open in IMG/M
3300018029\|Ga0187787_10439723	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	523	Open in IMG/M
3300018078\|Ga0184612_10138911	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1271	Open in IMG/M
3300018078\|Ga0184612_10250548	All Organisms → cellular organisms → Bacteria	914	Open in IMG/M
3300018431\|Ga0066655_10835808	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	627	Open in IMG/M
3300018468\|Ga0066662_11848187	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	632	Open in IMG/M
3300019487\|Ga0187893_10912499	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	524	Open in IMG/M
3300022563\|Ga0212128_10001767	All Organisms → cellular organisms → Bacteria → Proteobacteria	15182	Open in IMG/M
3300025164\|Ga0209521_10516702	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	623	Open in IMG/M
3300025167\|Ga0209642_10329167	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	865	Open in IMG/M
3300025314\|Ga0209323_10532554	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	678	Open in IMG/M
3300025325\|Ga0209341_10071099	All Organisms → cellular organisms → Bacteria	2943	Open in IMG/M
3300025907\|Ga0207645_11134927	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	526	Open in IMG/M
3300025933\|Ga0207706_10031055	All Organisms → cellular organisms → Bacteria → Proteobacteria	4761	Open in IMG/M
3300025936\|Ga0207670_10273069	All Organisms → cellular organisms → Bacteria	1315	Open in IMG/M
3300026075\|Ga0207708_10927535	All Organisms → cellular organisms → Bacteria → Proteobacteria	754	Open in IMG/M
3300026095\|Ga0207676_10847855	All Organisms → cellular organisms → Bacteria	894	Open in IMG/M
3300027273\|Ga0209886_1082074	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	519	Open in IMG/M
3300027490\|Ga0209899_1045540	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	919	Open in IMG/M
3300027665\|Ga0209983_1049768	All Organisms → cellular organisms → Bacteria	916	Open in IMG/M
3300027909\|Ga0209382_10123812	All Organisms → cellular organisms → Bacteria → Proteobacteria	3013	Open in IMG/M
3300027909\|Ga0209382_10300992	All Organisms → cellular organisms → Bacteria	1809	Open in IMG/M
3300028592\|Ga0247822_11416738	All Organisms → cellular organisms → Bacteria → Proteobacteria	585	Open in IMG/M
3300028596\|Ga0247821_10502279	All Organisms → cellular organisms → Bacteria	771	Open in IMG/M
3300028597\|Ga0247820_10193283	All Organisms → cellular organisms → Bacteria	1293	Open in IMG/M
3300028608\|Ga0247819_10889900	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	557	Open in IMG/M
3300028812\|Ga0247825_10457110	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	906	Open in IMG/M
3300028889\|Ga0247827_10481472	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300030336\|Ga0247826_11670843	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	519	Open in IMG/M
3300031572\|Ga0318515_10109221	All Organisms → cellular organisms → Bacteria	1456	Open in IMG/M
3300031716\|Ga0310813_11465242	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	635	Open in IMG/M
3300031720\|Ga0307469_10449949	All Organisms → cellular organisms → Bacteria	1115	Open in IMG/M
3300031740\|Ga0307468_100940177	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	754	Open in IMG/M
3300031740\|Ga0307468_101454018	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300031744\|Ga0306918_11579835	All Organisms → cellular organisms → Bacteria → Proteobacteria	500	Open in IMG/M
3300031894\|Ga0318522_10218753	All Organisms → cellular organisms → Bacteria → Proteobacteria	722	Open in IMG/M
3300031897\|Ga0318520_10782392	All Organisms → cellular organisms → Bacteria → Proteobacteria	598	Open in IMG/M
3300031949\|Ga0214473_10028653	All Organisms → cellular organisms → Bacteria → Proteobacteria	6531	Open in IMG/M
3300031949\|Ga0214473_10103705	All Organisms → cellular organisms → Bacteria	3321	Open in IMG/M
3300031949\|Ga0214473_10117882	All Organisms → cellular organisms → Bacteria	3100	Open in IMG/M
3300031965\|Ga0326597_11751319	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	585	Open in IMG/M
3300031965\|Ga0326597_12044912	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	529	Open in IMG/M
3300032076\|Ga0306924_10079257	All Organisms → cellular organisms → Bacteria	3680	Open in IMG/M
3300032076\|Ga0306924_11281122	All Organisms → cellular organisms → Bacteria	788	Open in IMG/M
3300032180\|Ga0307471_100829818	All Organisms → cellular organisms → Bacteria	1092	Open in IMG/M
3300032180\|Ga0307471_103846916	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300032205\|Ga0307472_101543326	All Organisms → cellular organisms → Bacteria → Proteobacteria	650	Open in IMG/M
3300032205\|Ga0307472_102676091	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	509	Open in IMG/M
3300033233\|Ga0334722_10016365	All Organisms → cellular organisms → Bacteria → Proteobacteria	6514	Open in IMG/M
3300033417\|Ga0214471_10264681	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1403	Open in IMG/M
3300033551\|Ga0247830_10197660	All Organisms → cellular organisms → Bacteria	1500	Open in IMG/M
3300033813\|Ga0364928_0085762	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300034114\|Ga0364938_076497	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	620	Open in IMG/M
3300034147\|Ga0364925_0062336	Not Available	1282	Open in IMG/M
3300034150\|Ga0364933_167320	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	572	Open in IMG/M
3300034176\|Ga0364931_0122989	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	829	Open in IMG/M
3300034178\|Ga0364934_0172024	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	821	Open in IMG/M
3300034690\|Ga0364923_0137504	All Organisms → cellular organisms → Bacteria → Proteobacteria	632	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	77.21%
Host-Associated	Host-Associated	21.32%
Engineered	Engineered	1.47%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	71.32%
Plants	Host-Associated → Plants	21.32%
Aquatic	Environmental → Aquatic	5.88%
Wastewater	Engineered → Wastewater	1.47%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	65.44%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.97%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.35%
Floodplain	Environmental → Terrestrial → Floodplain	5.15%
Thermal Springs	Environmental → Aquatic → Thermal Springs	2.21%
Marine	Environmental → Aquatic → Marine	1.47%
Sediment	Environmental → Aquatic → Sediment	1.47%
Activated Sludge	Engineered → Wastewater → Activated Sludge	1.47%
Freshwater	Environmental → Aquatic → Freshwater	0.74%
Cave	Environmental → Terrestrial → Cave	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	45.59%
Loam	Environmental → Terrestrial → Soil → Loam	13.24%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.76%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	5.15%
Sand	Environmental → Terrestrial → Soil → Sand	4.41%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.41%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.94%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	2.21%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.21%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.21%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.47%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.47%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	1.47%
Lake	Environmental → Aquatic → Freshwater → Lake	0.74%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.44%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.76%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.29%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.09%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.62%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	5.88%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	5.15%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.41%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	4.41%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.41%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.94%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	2.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.94%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.21%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.21%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.47%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	1.47%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.47%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	1.47%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	1.47%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.74%
Neutral	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Neutral	0.74%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.74%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.56%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	9.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	5.88%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.15%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	5.15%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.41%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.41%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.41%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	4.41%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	2.94%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.21%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.21%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.21%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.21%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.47%
Thermal Springs	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs	1.47%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.47%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.47%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.47%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.47%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	1.47%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.47%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.47%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.47%
Wastewater	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Wastewater	1.47%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.74%
Hot Spring Fe-Si Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Neutral → Hot Spring Fe-Si Sediment	0.74%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.74%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.74%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.74%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	0.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.74%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300004058	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005183	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D1	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009444	Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP3	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009817	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20	Environmental	Open in IMG/M
3300009818	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40	Environmental	Open in IMG/M
3300009819	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_40_50	Environmental	Open in IMG/M
3300009822	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40	Environmental	Open in IMG/M
3300009873	Activated sludge microbial diversity in wastewater treatment plant from Taiwan - Wenshan plant	Engineered	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010938	Sediment microbial community from Chocolate Pots hot springs, Yellowstone National Park, Wyoming, USA. Combined Assembly of Gp0156111, Gp0156114, Gp0156117	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014308	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleC_D1	Environmental	Open in IMG/M
3300014318	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D1_rd	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300018029	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP06_20_MG	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019487	White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaG	Environmental	Open in IMG/M
3300022563	OV2_combined assembly	Environmental	Open in IMG/M
3300025164	Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 4	Environmental	Open in IMG/M
3300025167	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 19_2 (SPAdes)	Environmental	Open in IMG/M
3300025314	Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 2	Environmental	Open in IMG/M
3300025325	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_2 (SPAdes)	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027273	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_40_50 (SPAdes)	Environmental	Open in IMG/M
3300027490	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10 (SPAdes)	Environmental	Open in IMG/M
3300027665	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028596	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14	Environmental	Open in IMG/M
3300028597	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14	Environmental	Open in IMG/M
3300028608	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Xylose_Day6	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033233	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottom	Environmental	Open in IMG/M
3300033417	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT142D155	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300033813	Sediment microbial communities from East River floodplain, Colorado, United States - 30_j17	Environmental	Open in IMG/M
3300034114	Sediment microbial communities from East River floodplain, Colorado, United States - 9_s17	Environmental	Open in IMG/M
3300034147	Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17	Environmental	Open in IMG/M
3300034150	Sediment microbial communities from East River floodplain, Colorado, United States - 25_j17	Environmental	Open in IMG/M
3300034176	Sediment microbial communities from East River floodplain, Colorado, United States - 21_j17	Environmental	Open in IMG/M
3300034178	Sediment microbial communities from East River floodplain, Colorado, United States - 27_j17	Environmental	Open in IMG/M
3300034690	Sediment microbial communities from East River floodplain, Colorado, United States - 60_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1046707282	3300000364	Soil	MRWPPRFGHAHEAWPGITLSGIVILAAAVIADAFGEPPRGGPRLHVGLAIGFAVLVLGYVLRRFERRDRRDRDAP*
INPhiseqgaiiFebDRAFT_1057279522	3300000364	Soil	MRWRPRIGRPHEAWPGITISGVVILAAAVIADAFGDPPRGGPRLYVGLGLGFTVLGLGYVLRYFERRDGGDGNAP*
F24TB_107854121	3300000550	Soil	VTRWRPRIGRAHESWPGISXXGVVILAAAVIADAFGDPPRGGPRLYVGLGLGTLVLVLGYVLRRFERRDEGDRDAP*
JGI10214J12806_100841272	3300000891	Soil	EAWPGMTISGIVILAAAVLADAFGEPPRGGPRLHVGLALGLGALVLGYVLRRFERRDRGDRDAP*
Ga0055498_101324412	3300004058	Natural And Restored Wetlands	VPLRLPQLGRPRDAWPGVTISGVVILAAAVVADSLGDPPRGGPRLLIGLVLGFVLIGLGYLLRCWEQRRP*
Ga0062590_1005062912	3300004157	Soil	MRWPPRLGHAHEAWPGITIAGIVILAAAVIADAFGEPPQGGPRLHMGLAIGFAALVLGYVLRRFERRDRGDGDAP*
Ga0063356_1000615232	3300004463	Arabidopsis Thaliana Rhizosphere	VAFRWPRIGRPHEAWPGITIAGIVILAAAVVADAFSDPPRGGPRLYVGLTLGGAVIVLGYVLRRLERRHEGDRNAP*
Ga0062595_1019852642	3300004479	Soil	VMRWPPRLGHAHEAWPGITIAGIVILAAAVIADAFGEPPQGGPRLHMGLAIGFAALVLGYVLRRFERRDRGDGDAP*
Ga0062595_1026215992	3300004479	Soil	MRWPPRFGHAHEAWPGITLSGIVILAAAVIADAFGEPPRGGPRLHVGLAIGFAVLVLGYVLRRFERRDRGDRDAP*
Ga0066395_103748922	3300004633	Tropical Forest Soil	VTRWRPRIGEAHEAWPGITVTGVVILAAAVIADAFGDPPRGGARLYVGLILGAVVLLLGYALRYFERRNEGDGDAP*
Ga0062594_1031550432	3300005093	Soil	MRWPPRLGHAHEAWPGITISGIVILAAAVLADAFGEPPRGGPRLHVGLALGLGALVLGYVLRRFERRDRGDGNAP*
Ga0066674_101742672	3300005166	Soil	MGVPRSDQAQDAWPGLTIAGIVIVAAAVLADSFGDPPRGGPRLVVGLVLGLAVIVVGYVVRRWETRERRDSSGP*
Ga0066685_106897561	3300005180	Soil	MGVPRSDQAQDAWPGLTIAGIVIVAAAVLADSFGDPPRGGPRLVVGLVLGLAVIVVGYVVRRWETRERRDSPGP*
Ga0068993_103869531	3300005183	Natural And Restored Wetlands	WPGFTISGIVILAAAVIADAFGEPPRGGPRLHVGLALGVVVLILGYVMRRFERRDRGDGNAP*
Ga0070676_115257701	3300005328	Miscanthus Rhizosphere	MRWPPRFGDAHEAWPGITIAGIVILAAAVIADAFGEPPQGGPRLHMGLAIGFVALVLGYVLRRFERRDRGDRDAP*
Ga0070690_1006918682	3300005330	Switchgrass Rhizosphere	MRWPPRLGHAHEAWPGISIAGIVILAAAVIADAFGEPPQGGPRLHMGLAIGFAALVLGYVLRRFERRDRGDRDAP*
Ga0066388_1014648461	3300005332	Tropical Forest Soil	VTGWRPRIGEAHEAWPGITVSGIVILAAAVLADAFGEPPRGGPRLYIGLGLGAMVLVLGYVLRYFERRDGGDGNAP*
Ga0066388_1018848042	3300005332	Tropical Forest Soil	VPGRVEDAWPGLTIAGIVILAAAVLADAFGDPPRGGPRLLVGLALGGAVVVVGYVIRRRETRLPPGSRES*
Ga0070689_1002728462	3300005340	Switchgrass Rhizosphere	MRWPPRLGHAHEAWPGITIAGIVILAAAVIADAFGEPPQGGPRLHMGLAIGFVALVLGYVLRRFERRDRGDRDAP*
Ga0070705_1006956152	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MRWPPRFGHAHEAWPGITISGIVILAAAVIADAFGEPPQGGPRLHVGLAIGFAVLVLGYVLRRFERRDRGDGNAP*
Ga0066686_104476842	3300005446	Soil	MGVPRFGQAQDAWPGLTIAGIVIVAAAVVADSFGDPPRGGPRLVVGLVLGFTVIVVGYVVRRRETRERRDSPGP*
Ga0070741_101686202	3300005529	Surface Soil	MRWPRLGRSHEAWPGVTIAGVVVLAAAVLADAAGHPPRGGPRLLVGLVLGVALLVVGYLLRYWERRHP*
Ga0070695_1014047892	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	IRPRAITARVMRWPPRLGHAHEAWPGITIAGIVILAAAVIADAFGEPPQGGPRLHMGLAIGFAALVLGYVLRRFERRDRGDGDAP*
Ga0070696_1009959871	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MGVPRFGQAQDAWPGLTIAGIVIVAAAVVADSFGDPPRGGPRLVVGLVLGFTVILVGYVVRRRETRERRDSPGP*
Ga0070696_1011078872	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	AITARVMRWPPRLGHAHEAWPGISIAGIVILAAAVIADAFGEPPQGGPRLHMGLAIGFAALVLGYVLRRFERRDRGDGDAP*
Ga0070704_1016832542	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MRWPPRLGHAHEAWPGITIAGIVILAAAVIADAFGEPPQGGPRLHMGLAIGFAALVLGYVLRRFERRDRG
Ga0066905_1014203292	3300005713	Tropical Forest Soil	VNWHFGRAHDAWPGVTIAGIVIVSSAVLADAFGEPPRGGPRLLIGLILGAVVIVIGYVLRFWERRQP*
Ga0066905_1015154052	3300005713	Tropical Forest Soil	VPIRLPQLGRPHDAWPGVTISGVVVLAAAVLADSLGDPPRGGPRLLVGLALGFLLLAVGYLLRWWEQRH*
Ga0066903_1000920433	3300005764	Tropical Forest Soil	VTGWRPRIGEAHEAWPGITISGIVILAAAVLADALGEPPRGGPRLYIGLGLGAAVLVLGYVLRYFERRDGGDGNAP*
Ga0068858_1011249722	3300005842	Switchgrass Rhizosphere	PRAITARVMRWPPRFGDAHEAWPGITIAGIVILAAAVIADAFGEPPQGGPRLHMGLAIGFVALVLGYVLRRFERRDRGDGDAP*
Ga0068860_1028457982	3300005843	Switchgrass Rhizosphere	MRWPPRLGHAHEAWPGITIAGIVILAAAVIADAFGEPPQGGPRLHMGLAIGFAALVLGYVLRRFERRDRGDGNAP*
Ga0075422_103530491	3300006196	Populus Rhizosphere	MRWPPRFGHAHEAWPGITLSGIVILAAAVIADAFGEPPRGGPRLHVGLAIGFAVLVLGYVLRRFERRDRGDQDAP*
Ga0075421_1001542243	3300006845	Populus Rhizosphere	VAFRWPRIGRPHEAWPGITIAGIVILAAAVLADAFSDPPRGGPRLYVGLTLGGAVIVLGYVLRRLERRNEGDRNAP*
Ga0075421_1005232602	3300006845	Populus Rhizosphere	VPRRWPRIGYPHEAWPGITISGTVILAAAVAADAFGEPPRGGARLYVGLGLGFAALVLGYVLRRVERRGRGDGNAP*
Ga0075431_1003040514	3300006847	Populus Rhizosphere	VAFRWPRIGRPHEAWPGITIAGIVILAAAVLADAFSDPPRGGPRLYVGLTLGGAVIVLGYVLRRLERRN*
Ga0068865_1016374842	3300006881	Miscanthus Rhizosphere	MLEPDLFRPAWPSIQPRAITARVMRWPPRFGDAHEAWPGITIAGIVILAAAVIADAFGEPPQGGPRLHMGLAIGFVALVLGYVLRRFERRDRGDRDAP*
Ga0075424_1009903642	3300006904	Populus Rhizosphere	VTRWRPRIGEAHHAWPGITITGIVILAAAVLADAFGEPPRGGPRLYLGLGLGAVVLVLGYALRYFEQRDGGDGNAP*
Ga0075424_1025650231	3300006904	Populus Rhizosphere	VTPRWPRIGYAHEAWPGITISGIVILAAAVIADAFGGPPRGGPRLYVGLGLGLAVLVLGYVLRR
Ga0066710_1001383242	3300009012	Grasslands Soil	MPIPQLGRAGDAWPGITLSGIVIVAAAVLADAFGDPPRGGPRLVIGLALGFILIAAGYALRRWEQRRP
Ga0075418_102106492	3300009100	Populus Rhizosphere	MRWPPRFGHAHEAWPGITLSGIVILAAAVIADAFGEPPRGGPRLHVGLAIGFAVLVLGYVLRRFERRDGGDRDAP*
Ga0066709_1009680472	3300009137	Grasslands Soil	LTAPEARAIRIGMGVPRSDQAQDAWPGLTIAGIVIVAAAVLADSFGDPPRGGPRLVVGLVLGLAVIVVGYVVRRWETRERRDSPGP*
Ga0066709_1028557112	3300009137	Grasslands Soil	MPIPQLGRAGDAWPGITLSGIVIVAAAVLADAFGDPPRGGPRLVIGLALGFILIAAGYALRRWEQRRP*
Ga0114129_101211013	3300009147	Populus Rhizosphere	VPLRWPRFGRATEAWPGVTISGVVILAAAVLADAFGDPPRGGPRLGVGLALGAVLLVLGYLLRLWERREG*
Ga0114129_122980452	3300009147	Populus Rhizosphere	MAFRLPQLGRAHDAWPGITISGVVILASAVLADAFGEPPRGGPRLIIGLVLGFILVGLGYLLRFWERRRP*
Ga0075423_114673142	3300009162	Populus Rhizosphere	LPSILPRDITARVTRWRPRIGEAHHAWPGITITGIVILAAAVLADAFGEPPRGGPRLYLGLGLGAVVLVLGYALRYFEQRDGGDGNA
Ga0075423_122815412	3300009162	Populus Rhizosphere	GVPPSDRAQDAWPGLTIAGIVIVAAAVLADSLGDPPRGGPRLVVGLVLGLAVIVVGYVVRRWETRERRDSPEP*
Ga0105248_115945892	3300009177	Switchgrass Rhizosphere	MRWPPRLGHAHEAWPGITIAGIVILAAAVIADAFGEPPQGGPRLHMGLAIGFAALVLGYVLRRFERRDRRDRDAP*
Ga0114945_1000137010	3300009444	Thermal Springs	VAIRFPRLGRARDAWPGVLISGVVILAAAMVADAFGEPPRGGARLAVGVTLGLVLIALGYLLRFWENRVP*
Ga0105249_121673862	3300009553	Switchgrass Rhizosphere	MRWPPRFGDAHEAWPGITIAGIVILAAAVIADAFGEPPQGGPRLHMGLAIGFAALVLGYVLRRFERRDRGDGDAP*
Ga0126374_114784392	3300009792	Tropical Forest Soil	VTGWRPRIGEAHEAWPGITISGIVILAAAVIADAFGDPPRGGARLYVGLILGAVVLLLGYVLRYFE
Ga0105062_10351732	3300009817	Groundwater Sand	GMPLPRFGRARDASPGILISGIVIVVAAVLADAFGDPPRGGPRLVVGLALGFIVIALGYVVRLWERREP*
Ga0105072_10120742	3300009818	Groundwater Sand	MPLPRFGRARDASPGILISGIVIVVAAVLADAFGDPPRGGPRLVVGLALGFLVIALGYVVRLWERREP*
Ga0105087_10910421	3300009819	Groundwater Sand	VTFRWPRIGRAHEAWPGITISGIVVLAAAVLADAVGDPPRGGPRLYVGLGIGAAVLVLGYVLRRLERRDGGDRHAP*
Ga0105066_10503692	3300009822	Groundwater Sand	MPLPRFGRARDASPGILISGIVIVAAAVLADAFGDPPRGGPRLVVGLALGFLVIALGYVVRLWERREP*
Ga0131077_106720762	3300009873	Wastewater	VARRWPTLGRAGDAWPGLTIAGIVILAAAVLADALSEPPRGGPRLYVGLILGSVVLTVGYVLRRLERPDRGDPDAL*
Ga0131077_106769812	3300009873	Wastewater	VAGRWPRLGRADEAWPGITISGIVILAAAVLGDALGEPPRGGARLYVGLILGSVVLVLGYVLRRIERRR
Ga0126382_103824191	3300010047	Tropical Forest Soil	MRWPQLGRAHDAWPGVTIAGIVILSAAVLADAFGDPPRGGPRLIVGLVLGGAVLILGYVLRFWERRQP*
Ga0126382_125223412	3300010047	Tropical Forest Soil	VPIRLPQLGRPHDAWPGVTISGVVILAAAVLADSLGDPPRGGPRLLVGLALGFLLLAVGYLLRWWEQRH*
Ga0126370_115279732	3300010358	Tropical Forest Soil	VTRWRPRIGEAHEAWPGITVTGIVILAAAVIADAFGDPPRGGARLYVGLILGAVVLVLGYALRYFERRDEGDGNAP*
Ga0126372_105725872	3300010360	Tropical Forest Soil	VTGWRPRIGEAHEAWPGITISGIVILAAAVLADAFGEPPRGGPRLYIGLGLGAAVLVLGYVLRYFERRDGGDGNAP*
Ga0126377_103503771	3300010362	Tropical Forest Soil	VTGWRPRIGEAHEAWPGITIAGVVILAAAVIADAFGDPPHGGPRLYVGLALGFVVLVLGY
Ga0126377_105700141	3300010362	Tropical Forest Soil	VTGWRPRIGEAHEAWPGITICGIVILAAAVLADAFGEPPRGGPRLYIGLGLGAAVLVLGYVLRYFERRDGGDGNAP*
Ga0126377_115853341	3300010362	Tropical Forest Soil	VTRWRPRIGRAHEAWPGITISAVVILAAAVIADAFGEPPRGGPRLYVGLGLGFAVLVLGYVLRHFERRDRGDGNAP
Ga0126383_105494122	3300010398	Tropical Forest Soil	VPGRVEDAWPGLTIAGIVILAAAVLADAFGDPPRGGPRLLVGLALGSAVVVVGYVIRRRETRLPPGSRES*
Ga0126383_111459152	3300010398	Tropical Forest Soil	MAIRLPQLGRPHDAWPGVTISGVVILAAAVLADSLGDPPRGGPRLMVGLALGFVLIAVGYLLRLWERRQ*
Ga0126383_116406292	3300010398	Tropical Forest Soil	VTRWRPRIGRAQEAWPGITISGIVILAAAVLADALGEPPRGGPRLYIGLGLGAAVLVLGYVLRYFERRDGGDGNAP*
Ga0134127_113468302	3300010399	Terrestrial Soil	MRWPPRLGHAHEAWPGISIAGIVILAAAVIADAFGEPPQGGPRLHMGLAIGFAALVLGYVLRRFERRDRGDGDAP*
Ga0134121_104558341	3300010401	Terrestrial Soil	MRWPPRLGHAHEAWPGISIAGIVILAAAVIADAFGEPPQGGPRLHMGLAIGFAALVLGYVLRRFERRDRRDRDA
Ga0137716_101160242	3300010938	Hot Spring Fe-Si Sediment	VRGWPRLGGPRDAWPGVTITGIVILAAAILADAFGEPPRGGPRLYVGLGLGAAVLVVGYAVRRLEQRPPGNTDAV*
Ga0126369_113371792	3300012971	Tropical Forest Soil	VTRWRPRIGQAHEAWPGITISGIVILAAAVIADAFGDPPRGGARLYVGLILGAVVLVLGYALRYFERRDEGDGNAP*
Ga0126369_129178902	3300012971	Tropical Forest Soil	MAIRLPQLGRPHDAWPGVTISGVVVLAAAVLADSLGDPPRGGPRLMVGLALGFLLLAVGYLLRWWEQRH*
Ga0075354_11275982	3300014308	Natural And Restored Wetlands	MRWRPPRLGHAHEAWPGFTISGVVILAAAVVADSLGDPPRGGPRLLIGLVLGFVLIGLGYLLRCWEQRRP*
Ga0075351_10644692	3300014318	Natural And Restored Wetlands	MRWRPPRLGHAHEAWPGFTISGIVILAAAVIADAFGEPPRGGPRLHVGLALGVAVLILGYVMRRFERRDGGDGNAP*
Ga0157379_113958892	3300014968	Switchgrass Rhizosphere	MRWPPRFGDAHEAWPGITIAGIVILAAAVIADAFGEPPQGGPRLHMGLAIGFAALVLGYVLRRFERRDRGDRDAP*
Ga0132258_105633773	3300015371	Arabidopsis Rhizosphere	MRWPPRFGHAHEAWPGITLSGIVILAAAVIADAFGEPPQGGPRLHVGLAIGFAVLVLGYVLRRFERRDRGDRDAP*
Ga0132257_1022470111	3300015373	Arabidopsis Rhizosphere	MRWPPRFGHAHEAWPGITLSGIVILAAAVIAVAFGEPPQGAPRLHVGLAIGFAVLVLGYVLRRFERRDRRDRDAP*
Ga0132257_1025501541	3300015373	Arabidopsis Rhizosphere	MRWPPRLGHAHEAWPGISIAGIVILAAAVIADAFGEPPQGGPRLHMGLAIGFAALVLGYVLRRFERRRDRGDGDAP*
Ga0132255_1027711122	3300015374	Arabidopsis Rhizosphere	MRWPPRLGHAHEAWPGISIAGIVILAAAVIADAFGEPPQGGPRLHMGLAIGFAALVLGYVLRRFERRDRRDRDAP*
Ga0182040_103869112	3300016387	Soil	VRLPRFGRAHDAWPGVTIAGVVIVAAAVVADAVGDPPRGGPRLIVGVVIGLATIVAGYVVRR
Ga0187787_104397231	3300018029	Tropical Peatland	VTRWRPQVGQAHEAWPGITITGIVILAAAVLADAFGDPPRGGPRLYLGLGLGAAVLVLGYVLRYWERRNE
Ga0184612_101389112	3300018078	Groundwater Sediment	VTFRWPRIGHAHEAWPGITICGVVILAAAVVADAFGEPPRGGPRLYVGLGLGVVVLVLGYVLRRLERRNGGDRHAL
Ga0184612_102505481	3300018078	Groundwater Sediment	IRRRAITARVTFRWPRLGRPHEAWPGITISAIVILAAAVVADAFGDPPRGGPRLYVGLGLGAVVLVVGYVLRRLERRDDGGDRHAP
Ga0066655_108358082	3300018431	Grasslands Soil	MGVPRSDQAQDAWPGLTIAGIVIVAAAVLADSFGDPPRGGPRLVVGLVLGLAVIVVGYVVRRWETRERRDSPGP
Ga0066662_118481872	3300018468	Grasslands Soil	MGVPRFGQAQDAWPGLTIAGIVIVAAAVVADSFGDPPRGGPRLVVGLVLGFTVIVVGYVVRRWETRERRDSPGP
Ga0187893_109124991	3300019487	Microbial Mat On Rocks	MPWRRFGRARDAWPGLVISGLVVVTASVAADAFGEPPRGGARLYTGLVLGVVLLVLGYLVRLWEGRQP
Ga0212128_1000176710	3300022563	Thermal Springs	VAIRFPRLGRARDAWPGVLISGVVILAAAMVADAFGEPPRGGARLAVGVTLGLVLIALGYLLRFWENRVP
Ga0209521_105167022	3300025164	Soil	AWPGITISGVVVLTAAVLADAFGEPPRGGPRLVVGLALGALLLVLGYLLRLWERREP
Ga0209642_103291672	3300025167	Soil	VRGRVVFRLPRLGRARDAWPGITISGVVVLTAAVLADAFGEPPRGGPRLVVGLALGALLLVLGYLLRLWERREP
Ga0209323_105325542	3300025314	Soil	VFRLPRLGRARDVWPGISISGAVVLAAAVLADAFGDPPRGGPRLLIGLALGALLLVLGYALRFWERRRS
Ga0209341_100710992	3300025325	Soil	VFRLPRLGRAREAWPGISISGAVVLAAAVLADAFGDPPRGGPRLLIGLALGALLLVLGYALRFWERRRS
Ga0207645_111349272	3300025907	Miscanthus Rhizosphere	MRWPPRFGDAHEAWPGITIAGIVILAAAVIADAFGEPPQGGPRLHMGLAIGFVALVLGYVLRRFERRDRGDRDAP
Ga0207706_100310553	3300025933	Corn Rhizosphere	MRWPPRLGHAHEAWPGITIAGIVILAAAVIADAFGEPPQGGPRLHMGLAIGFVALVLGYVLRRFERRDRGDRDAP
Ga0207670_102730693	3300025936	Switchgrass Rhizosphere	MRWPPRLGHAHEAWPGITIAGIVILAAAVIADAFGEPPQGGPRLHMGLAIGFAALVLGYVLRRFERRDRGDGDAP
Ga0207708_109275351	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	LGHAHEAWPGITISGIVILAAAVLADAFGEPPRGGPRLHVGLALGLGALVLGYVLRRFERRDRGDGNAP
Ga0207676_108478552	3300026095	Switchgrass Rhizosphere	MRWPPRLGHAHEAWPGISIAGIVILAAAVIADAFGEPPQGGPRLHMGLAIGFAALVLGYVLRRFERRDRGDGDAP
Ga0209886_10820742	3300027273	Groundwater Sand	MPLPRFGRARDASPGILISGIVIVAAAVLADAFGDPPRGGPRLVVGLALGFLVIALGYVVRLWERREP
Ga0209899_10455402	3300027490	Groundwater Sand	MPLPRFGRARDASPGILISGIVIVVAAVLADAFGDPPRGGPRLVVGLALGFIVIALGYVVRLWERREP
Ga0209983_10497682	3300027665	Arabidopsis Thaliana Rhizosphere	VAFRWPRIGRPHEAWPGITIAGIVILAAAVVADAFSDPPRGGPRLYVGLTLGGAVIVLGYVLRRLERRHEGDRNAP
Ga0209382_101238124	3300027909	Populus Rhizosphere	VAFRWPRIGRPHEAWPGITIAGIVILAAAVLADAFSDPPRGGPRLYVGLTLGGAVIVLGYVLRRLERRNEGDRNAP
Ga0209382_103009923	3300027909	Populus Rhizosphere	ARVPRRWPRIGYPHEAWPGITISGTVILAAAVAADAFGEPPRGGARLYVGLGLGFAALVLGYVLRRVERRGRGDGNAP
Ga0247822_114167381	3300028592	Soil	MRWPPRFGHAHEAWPGITLSGIVILAAAVIADAFGEPPQGGPRLHVGLAIGFAVLVLGYVLRRFERRDGGDRDAP
Ga0247821_105022791	3300028596	Soil	MRWPPRFGHAHEAWPGITLSGIVILAAAVIADAFGEPPRGGPRLHVGLAIGFAVLVLGYVLRRFERRDRGDRDAP
Ga0247820_101932831	3300028597	Soil	IRPRAITARVMRWPPRFGHAHEAWPGITLSGIVILAAAVIADAFGEPPQGGPRLHVGLAIGFAVLVLGYVLRRFERRDRGDRDAP
Ga0247819_108899001	3300028608	Soil	MRWPPRFGHAHEAWPGITLSGIVILAAAVIADAFGEPPQGGPRLHVGLAIGFAVLVLGYVLRRFERRGGRDRDAP
Ga0247825_104571102	3300028812	Soil	VKWQFGRAHDAWPGVTISGIVIIAAAVLADAFGEAPRGGPRLLIGLTLGAVVLGIGYALRFWERR
Ga0247827_104814722	3300028889	Soil	MRWPPRFGHAHEAWPGITLSGIVILAAAVIADAFGEPPQGGPRLHVGLAIGFAVLVLGYVLRRFERRDRGDRDAP
Ga0247826_116708432	3300030336	Soil	MRWPPRFGHAHEAWPGITLSGIVILAAAVIADAFGEPPQGGPRLHVGLAIGFAVLVLGYVLRRFERRD
Ga0318515_101092212	3300031572	Soil	VRLPRFGRAHDAWPGVTIAGVVIVAAAVVADAVGDPPRGGPRLIVGVVIGLATIVAGYVVRRRETRQPPNS
Ga0310813_114652422	3300031716	Soil	MRWPPRFGHAHEAWPGITIAGIVILAAAVIADAFGEPPQGGPRLHMGLAIGFAALVLGYVLRRFERRDRGDGDAP
Ga0307469_104499492	3300031720	Hardwood Forest Soil	VVRWRPRIGRPHEAWPGITISGVVILAAAVIADAFGDPPRGGPRLYVGLGLGFAVLVLGYVLRYFERRDGGDANAP
Ga0307468_1009401772	3300031740	Hardwood Forest Soil	VTRWRPRIGRAHEVWPGITITGVVILAAAVIADAFGEPPRGGPRLYVGLGLGFAVLVLGYVLRYFEGRDGGGGNAP
Ga0307468_1014540182	3300031740	Hardwood Forest Soil	VTRWRPRIGEAHHAWPGITITGIVILAAAVLADAFGEPPRGGPRLYLGLGLGAVVLVLGYALRYFEQRDGGDGNAP
Ga0306918_115798351	3300031744	Soil	AHDAWPGVTIAGVVIVAAAVVADAVGDPPRGGPRLIVGVVIGLATIVAGYVVRRRETRQPPNS
Ga0318522_102187532	3300031894	Soil	VRLPRFGRAHDAWPGVTIAGVVIVAAAVVADAVGDPPRGGPRLIVGVVIGLATIVAGYVVRRRETRQPPDS
Ga0318520_107823921	3300031897	Soil	RLPRFGRAHDAWPGVTIAGVVIVAAAVVADAVGDPPRGGPRLIVGVVIGLATIVAGYVVRRRETRQPPNS
Ga0214473_100286532	3300031949	Soil	MRWWPPRLGHAHEAWPGFTISGIVIVAAAVIADAFGEPPRGGPRLHVGLALGVAVLILGYVMRRFERRDRGDGNAP
Ga0214473_101037053	3300031949	Soil	VIPAWYPLAMRLLQFGRGRDAWPGITISGVVVVVAAVLADAFGDPPRGGPRLVVGLALGAVLIVLGYAVRMWENRQP
Ga0214473_101178823	3300031949	Soil	MAFRWPALGRPGDAWPGVTISGVVILAAAVLADAVGDPPRGGPRLVIGLALGAVLVVAGYLLRFWERRESGVCRSKRND
Ga0326597_117513191	3300031965	Soil	MRLPQFGRARDAWPGITVSGVVVLAAAVLADAVGDPPRGGPRLVVGLALGAVLIVLGYVVRMWENRQP
Ga0326597_120449122	3300031965	Soil	MAFRWPALGRPGDAWPGVTISGVVILAAAVLADAFGDPPRGGPRLVIGLALGAVLVFAGYLLRLRERRES
Ga0306924_100792574	3300032076	Soil	VRLPRFGRAHDAWPGVTIAGVVIVAAAVVADAVGDPPRGGPRLIVGVVIGLATIVAGYVVRRRET
Ga0306924_112811222	3300032076	Soil	GRAHDAWPGVTIAGVVIVAAAVVADAVGDPPRGGPRLVVGVVIGLATIVAGYVVRRRETRQPPDS
Ga0307471_1008298182	3300032180	Hardwood Forest Soil	VTPRWPRIGHAHEAWPGITISGIVILAAAVIADAFGEPPRGGPRLYVGLGLGFAVLVLGYVLLLVERRDGGDGNAP
Ga0307471_1038469162	3300032180	Hardwood Forest Soil	VPSRVEDAWPGLTIAGIVILAAAVLADAFGDPPRGGPRLLVGLVLGGAVVVVGYVIRRRETRPPPGSRES
Ga0307472_1015433261	3300032205	Hardwood Forest Soil	VARWRPQLGRAHEAWPGITISGIVILAAAVLADAFGEPPGGGPRLQIGLGLGFIVIVLGYALRRFERRKDGGDGNAP
Ga0307472_1026760912	3300032205	Hardwood Forest Soil	VPSRVEDAWPGLTIAGIVILAAAVFADAFGDPPRGGPRLLVGLVLGGAVVVVGYVIRRRETRPPPGSRES
Ga0334722_100163655	3300033233	Sediment	MRWRRPRLGHAHEAWPGFTISGIVILAAAVIADAFGEPPRGGPRLHVGLALGVAVLILGYVTRRFERRDRGDGNAP
Ga0214471_102646812	3300033417	Soil	MRLPQFGRGRDAWPGITISGVVVLATAVFADAFGDPPRGGPRLVVGLALGAVLVVLGYVVRLWENRQP
Ga0247830_101976602	3300033551	Soil	MRWPPRFGHAHEAWPGITLSGIVILAAAVIADAFGEPPRGGPRLHVGLAIGFAVLVLGYVLRRFERRDGGDRDAP
Ga0364928_0085762_244_474	3300033813	Sediment	VTFRWPRIGHAHEAWPGITICGVVILAAAVVADAFGEPPRGGPRLYVGLGLGVVVLVLGYVLRRFERRDGGDRHAL
Ga0364938_076497_2_217	3300034114	Sediment	VTFRWPRIGHAHEAWPGITICGVVILAAAVVADAFGEPPRGGPRLYVGLGLGVVVLVLGYVLRRFERRDGGD
Ga0364925_0062336_995_1225	3300034147	Sediment	MRWQPPRFGRADEAWPGITICGIVIVAAAIIADAFGEPPRGGPRLHVGLALGIGALILGYVMRRFERRDRGDGNAP
Ga0364933_167320_206_433	3300034150	Sediment	MRWPPRLGHAHEAWPGITISGIVILAAAVLADAFGEPPRGGPRLHVGLALGLGALVLGYVLRRFERRDRGDGNAP
Ga0364931_0122989_270_482	3300034176	Sediment	VPFRLPQLGRPQDAWPGVTISGVVILAAAVLADAFGDPPRGGPRLMVGLALGFVLIVLGYLLRLWERRRP
Ga0364934_0172024_608_814	3300034178	Sediment	MRLPQFGSGRDAWPGITISGVVVVAAAVLADAFGDPPRGGPRLVVGLALGAVLIVLGYVVRMWENRQP
Ga0364923_0137504_1_192	3300034690	Sediment	AWPGITICGIVIVAAAILADAFGEPPRGGPRLHVGLALGIGALILGYVMRRFERRDRGDGNAP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F057483

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences