NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F057547

Metagenome / Metatranscriptome Family F057547

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F057547
Family Type Metagenome / Metatranscriptome
Number of Sequences 136
Average Sequence Length 51 residues
Representative Sequence MGMGRPCAAVACSFIALAAWVRQLPFWLLNSRVVTECLQSGHLNVLKPFIILMV
Number of Associated Samples 100
Number of Associated Scaffolds 136

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 30.15 %
% of genes near scaffold ends (potentially truncated) 42.65 %
% of genes from short scaffolds (< 2000 bps) 62.50 %
Associated GOLD sequencing projects 92
AlphaFold2 3D model prediction Yes
3D model pTM-score0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (75.735 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(13.971 % of family members)
Environment Ontology (ENVO) Unclassified
(23.529 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(52.206 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 59.76%    β-sheet: 0.00%    Coil/Unstructured: 40.24%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.36
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 136 Family Scaffolds
PF00072Response_reg 5.88
PF07238PilZ 3.68
PF05163DinB 3.68
PF00196GerE 2.94
PF14534DUF4440 2.21
PF02518HATPase_c 2.21
PF11154DUF2934 1.47
PF02954HTH_8 1.47
PF00589Phage_integrase 1.47
PF01833TIG 1.47
PF02517Rce1-like 1.47
PF13505OMP_b-brl 1.47
PF07730HisKA_3 1.47
PF07366SnoaL 1.47
PF06463Mob_synth_C 1.47
PF13088BNR_2 0.74
PF04299FMN_bind_2 0.74
PF16757Fucosidase_C 0.74
PF00034Cytochrom_C 0.74
PF08281Sigma70_r4_2 0.74
PF01042Ribonuc_L-PSP 0.74
PF13579Glyco_trans_4_4 0.74
PF13545HTH_Crp_2 0.74
PF04454Linocin_M18 0.74
PF00665rve 0.74
PF02371Transposase_20 0.74
PF13518HTH_28 0.74
PF12779WXXGXW 0.74
PF02195ParBc 0.74
PF01850PIN 0.74
PF13517FG-GAP_3 0.74
PF01957NfeD 0.74
PF01695IstB_IS21 0.74
PF06745ATPase 0.74
PF00990GGDEF 0.74
PF01022HTH_5 0.74
PF00437T2SSE 0.74
PF00512HisKA 0.74
PF12840HTH_20 0.74
PF07508Recombinase 0.74
PF02781G6PD_C 0.74
PF09926DUF2158 0.74
PF00083Sugar_tr 0.74
PF01527HTH_Tnp_1 0.74

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 136 Family Scaffolds
COG2318Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)Secondary metabolites biosynthesis, transport and catabolism [Q] 3.68
COG1266Membrane protease YdiL, CAAX protease familyPosttranslational modification, protein turnover, chaperones [O] 1.47
COG2896GTP 3',8-cyclase (molybdenum cofactor biosynthesis protein MoaA)Coenzyme transport and metabolism [H] 1.47
COG3850Signal transduction histidine kinase NarQ, nitrate/nitrite-specificSignal transduction mechanisms [T] 1.47
COG3851Signal transduction histidine kinase UhpB, glucose-6-phosphate specificSignal transduction mechanisms [T] 1.47
COG4449Predicted protease, Abi (CAAX) familyGeneral function prediction only [R] 1.47
COG4564Signal transduction histidine kinaseSignal transduction mechanisms [T] 1.47
COG4585Signal transduction histidine kinase ComPSignal transduction mechanisms [T] 1.47
COG0251Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 familyDefense mechanisms [V] 0.74
COG0364Glucose-6-phosphate 1-dehydrogenaseCarbohydrate transport and metabolism [G] 0.74
COG1484DNA replication protein DnaCReplication, recombination and repair [L] 0.74
COG1961Site-specific DNA recombinase SpoIVCA/DNA invertase PinEReplication, recombination and repair [L] 0.74
COG2801Transposase InsO and inactivated derivativesMobilome: prophages, transposons [X] 0.74
COG2826Transposase and inactivated derivatives, IS30 familyMobilome: prophages, transposons [X] 0.74
COG3316Transposase (or an inactivated derivative), DDE domainMobilome: prophages, transposons [X] 0.74
COG3547TransposaseMobilome: prophages, transposons [X] 0.74
COG4584TransposaseMobilome: prophages, transposons [X] 0.74

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms75.74 %
UnclassifiedrootN/A24.26 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001082|JGI12664J13189_1002338All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → Terriglobus saanensis2037Open in IMG/M
3300001416|JGI20176J14865_101753Not Available734Open in IMG/M
3300001471|JGI12712J15308_10001547All Organisms → cellular organisms → Bacteria → Acidobacteria6969Open in IMG/M
3300001593|JGI12635J15846_10185229All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella arctica1392Open in IMG/M
3300001593|JGI12635J15846_10858912Not Available519Open in IMG/M
3300002245|JGIcombinedJ26739_100291706Not Available1516Open in IMG/M
3300002245|JGIcombinedJ26739_100411875All Organisms → cellular organisms → Bacteria → Acidobacteria1230Open in IMG/M
3300002245|JGIcombinedJ26739_101276790Not Available625Open in IMG/M
3300002245|JGIcombinedJ26739_101415110Not Available589Open in IMG/M
3300002245|JGIcombinedJ26739_101663120Not Available537Open in IMG/M
3300005445|Ga0070708_100023764All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 835216Open in IMG/M
3300005468|Ga0070707_100033400All Organisms → cellular organisms → Bacteria4906Open in IMG/M
3300005468|Ga0070707_100580765All Organisms → cellular organisms → Bacteria → Acidobacteria1083Open in IMG/M
3300005536|Ga0070697_100008476All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae8023Open in IMG/M
3300005591|Ga0070761_10000085All Organisms → cellular organisms → Bacteria61970Open in IMG/M
3300005591|Ga0070761_10001681All Organisms → cellular organisms → Bacteria → Acidobacteria13850Open in IMG/M
3300005591|Ga0070761_10266164All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1026Open in IMG/M
3300005602|Ga0070762_10090122All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1758Open in IMG/M
3300005921|Ga0070766_10013915All Organisms → cellular organisms → Bacteria → Acidobacteria4183Open in IMG/M
3300005921|Ga0070766_10089773All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1803Open in IMG/M
3300005944|Ga0066788_10021720All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium1422Open in IMG/M
3300005994|Ga0066789_10225190Not Available788Open in IMG/M
3300006028|Ga0070717_10066922All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2988Open in IMG/M
3300006028|Ga0070717_10164276All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1928Open in IMG/M
3300006028|Ga0070717_10310844All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella aggregans1402Open in IMG/M
3300006176|Ga0070765_100030317All Organisms → cellular organisms → Bacteria4201Open in IMG/M
3300006176|Ga0070765_100543395Not Available1094Open in IMG/M
3300006794|Ga0066658_10868403All Organisms → cellular organisms → Bacteria → Acidobacteria516Open in IMG/M
3300006804|Ga0079221_10349824All Organisms → cellular organisms → Bacteria → Acidobacteria892Open in IMG/M
3300006893|Ga0073928_10006824All Organisms → cellular organisms → Bacteria15154Open in IMG/M
3300006893|Ga0073928_10024988All Organisms → cellular organisms → Bacteria → Acidobacteria5952Open in IMG/M
3300006893|Ga0073928_10060266All Organisms → cellular organisms → Bacteria → Acidobacteria3357Open in IMG/M
3300009029|Ga0066793_10857919Not Available515Open in IMG/M
3300009088|Ga0099830_10252402All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1396Open in IMG/M
3300009088|Ga0099830_10288292All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1308Open in IMG/M
3300009143|Ga0099792_10422383All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium820Open in IMG/M
3300009520|Ga0116214_1362958Not Available562Open in IMG/M
3300009522|Ga0116218_1000741All Organisms → cellular organisms → Bacteria22076Open in IMG/M
3300009618|Ga0116127_1113584All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium702Open in IMG/M
3300009623|Ga0116133_1006263All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2976Open in IMG/M
3300009624|Ga0116105_1071604All Organisms → cellular organisms → Bacteria829Open in IMG/M
3300009665|Ga0116135_1017538All Organisms → cellular organisms → Bacteria → Acidobacteria2480Open in IMG/M
3300009672|Ga0116215_1480562Not Available537Open in IMG/M
3300009764|Ga0116134_1021498All Organisms → cellular organisms → Bacteria2627Open in IMG/M
3300010379|Ga0136449_100502780All Organisms → cellular organisms → Bacteria → Acidobacteria2104Open in IMG/M
3300011120|Ga0150983_12846167Not Available544Open in IMG/M
3300011269|Ga0137392_10119152All Organisms → cellular organisms → Bacteria2102Open in IMG/M
3300011270|Ga0137391_10613027All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium911Open in IMG/M
3300012189|Ga0137388_11159512Not Available710Open in IMG/M
3300012202|Ga0137363_10610259All Organisms → cellular organisms → Bacteria → Acidobacteria921Open in IMG/M
3300012362|Ga0137361_11019866All Organisms → cellular organisms → Bacteria → Acidobacteria747Open in IMG/M
3300012683|Ga0137398_10794454All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium661Open in IMG/M
3300012917|Ga0137395_10168287All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1510Open in IMG/M
3300012917|Ga0137395_10735105All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes714Open in IMG/M
3300012918|Ga0137396_11151910All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium550Open in IMG/M
3300012923|Ga0137359_11598530Not Available540Open in IMG/M
3300014169|Ga0181531_10120683All Organisms → cellular organisms → Bacteria1575Open in IMG/M
3300014489|Ga0182018_10003055All Organisms → cellular organisms → Bacteria15621Open in IMG/M
3300014489|Ga0182018_10291027All Organisms → cellular organisms → Bacteria890Open in IMG/M
3300014498|Ga0182019_10200894Not Available1290Open in IMG/M
3300014501|Ga0182024_10197648All Organisms → cellular organisms → Bacteria2753Open in IMG/M
3300014838|Ga0182030_10255490All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1996Open in IMG/M
3300015193|Ga0167668_1003613All Organisms → cellular organisms → Bacteria → Acidobacteria3375Open in IMG/M
3300017822|Ga0187802_10329619Not Available598Open in IMG/M
3300017925|Ga0187856_1026430All Organisms → cellular organisms → Bacteria2842Open in IMG/M
3300018024|Ga0187881_10141880All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1053Open in IMG/M
3300018033|Ga0187867_10003292All Organisms → cellular organisms → Bacteria13009Open in IMG/M
3300018034|Ga0187863_10516639All Organisms → cellular organisms → Bacteria669Open in IMG/M
3300018035|Ga0187875_10019923All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium4090Open in IMG/M
3300018035|Ga0187875_10132550All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1402Open in IMG/M
3300019888|Ga0193751_1000696All Organisms → cellular organisms → Bacteria → Acidobacteria24635Open in IMG/M
3300019888|Ga0193751_1000765All Organisms → cellular organisms → Bacteria → Acidobacteria22871Open in IMG/M
3300020579|Ga0210407_10005417All Organisms → cellular organisms → Bacteria9864Open in IMG/M
3300020579|Ga0210407_10491288Not Available959Open in IMG/M
3300020580|Ga0210403_10011624All Organisms → cellular organisms → Bacteria → Acidobacteria7136Open in IMG/M
3300021046|Ga0215015_10960020All Organisms → cellular organisms → Bacteria → Acidobacteria1061Open in IMG/M
3300021171|Ga0210405_10312662All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1241Open in IMG/M
3300021178|Ga0210408_10288897All Organisms → cellular organisms → Bacteria → Acidobacteria1307Open in IMG/M
3300021180|Ga0210396_10136013All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2213Open in IMG/M
3300021401|Ga0210393_10000296All Organisms → cellular organisms → Bacteria45293Open in IMG/M
3300021401|Ga0210393_10004215All Organisms → cellular organisms → Bacteria → Acidobacteria11413Open in IMG/M
3300021401|Ga0210393_10032873All Organisms → cellular organisms → Bacteria → Proteobacteria4056Open in IMG/M
3300021401|Ga0210393_10174313Not Available1734Open in IMG/M
3300021405|Ga0210387_10217912All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1661Open in IMG/M
3300021407|Ga0210383_11202057Not Available637Open in IMG/M
3300021432|Ga0210384_10276153All Organisms → cellular organisms → Bacteria → Acidobacteria1513Open in IMG/M
3300021474|Ga0210390_10159699All Organisms → cellular organisms → Bacteria → Acidobacteria1901Open in IMG/M
3300021478|Ga0210402_10000865All Organisms → cellular organisms → Bacteria32578Open in IMG/M
3300021478|Ga0210402_10104708All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium2545Open in IMG/M
3300021479|Ga0210410_10000003All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae610966Open in IMG/M
3300021559|Ga0210409_10098246All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2702Open in IMG/M
3300022557|Ga0212123_10024519All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium6561Open in IMG/M
3300022557|Ga0212123_10388639All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium940Open in IMG/M
3300022726|Ga0242654_10036887Not Available1313Open in IMG/M
3300023019|Ga0224560_104939All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium842Open in IMG/M
3300025910|Ga0207684_10166709All Organisms → cellular organisms → Bacteria1898Open in IMG/M
3300025922|Ga0207646_10051071All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium3700Open in IMG/M
3300025922|Ga0207646_10117866All Organisms → cellular organisms → Bacteria2385Open in IMG/M
3300026551|Ga0209648_10137660All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1947Open in IMG/M
3300027565|Ga0209219_1003606All Organisms → cellular organisms → Bacteria → Acidobacteria3181Open in IMG/M
3300027565|Ga0209219_1043908Not Available1115Open in IMG/M
3300027591|Ga0209733_1017539All Organisms → cellular organisms → Bacteria → Acidobacteria1923Open in IMG/M
3300027674|Ga0209118_1003680All Organisms → cellular organisms → Bacteria → Acidobacteria6180Open in IMG/M
3300027727|Ga0209328_10251760Not Available527Open in IMG/M
3300027853|Ga0209274_10719925Not Available515Open in IMG/M
3300027889|Ga0209380_10157568All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin1221328Open in IMG/M
3300027903|Ga0209488_10806492All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium665Open in IMG/M
3300028047|Ga0209526_10035421All Organisms → cellular organisms → Bacteria3513Open in IMG/M
3300028047|Ga0209526_10303717Not Available1079Open in IMG/M
3300028047|Ga0209526_10372026Not Available953Open in IMG/M
3300028536|Ga0137415_10003479All Organisms → cellular organisms → Bacteria15641Open in IMG/M
3300028798|Ga0302222_10097630All Organisms → cellular organisms → Bacteria1171Open in IMG/M
3300028906|Ga0308309_10489451All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium1062Open in IMG/M
3300028906|Ga0308309_11577367Not Available559Open in IMG/M
3300029914|Ga0311359_10257608All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1476Open in IMG/M
3300029951|Ga0311371_10519840All Organisms → cellular organisms → Bacteria1562Open in IMG/M
3300029951|Ga0311371_11767013All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium670Open in IMG/M
3300030007|Ga0311338_12011256Not Available513Open in IMG/M
3300030399|Ga0311353_11692900Not Available508Open in IMG/M
3300030687|Ga0302309_10616175All Organisms → cellular organisms → Bacteria → Acidobacteria509Open in IMG/M
3300030760|Ga0265762_1001153All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae4770Open in IMG/M
3300031090|Ga0265760_10095885Not Available933Open in IMG/M
3300031234|Ga0302325_10088574All Organisms → cellular organisms → Bacteria5872Open in IMG/M
3300031234|Ga0302325_10772122All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division TA06 → candidate division TA06 bacterium1364Open in IMG/M
3300031236|Ga0302324_100007705All Organisms → cellular organisms → Bacteria → Acidobacteria22851Open in IMG/M
3300031236|Ga0302324_100024524All Organisms → cellular organisms → Bacteria → Acidobacteria11615Open in IMG/M
3300031236|Ga0302324_100086123All Organisms → cellular organisms → Bacteria5401Open in IMG/M
3300031249|Ga0265339_10250445All Organisms → cellular organisms → Bacteria → Acidobacteria857Open in IMG/M
3300031261|Ga0302140_11092270All Organisms → cellular organisms → Bacteria → Acidobacteria541Open in IMG/M
3300031525|Ga0302326_11415102Not Available938Open in IMG/M
3300031525|Ga0302326_13024100Not Available573Open in IMG/M
3300031708|Ga0310686_102479194Not Available606Open in IMG/M
3300031753|Ga0307477_10062059All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2576Open in IMG/M
3300033829|Ga0334854_003788All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium3693Open in IMG/M
3300033829|Ga0334854_049362Not Available1007Open in IMG/M
3300034163|Ga0370515_0165748All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium946Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil13.97%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil13.24%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil11.03%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa9.56%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil8.82%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere7.35%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil5.15%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland4.41%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland3.68%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring3.68%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil2.94%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil1.47%
PalsaEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa1.47%
SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Soil1.47%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog1.47%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog0.74%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment0.74%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil0.74%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.74%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil0.74%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.74%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.74%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.74%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil0.74%
FenEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Fen0.74%
BogEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Bog0.74%
Prmafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil0.74%
PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost0.74%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere0.74%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001082Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O3EnvironmentalOpen in IMG/M
3300001416Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 shallow-072012EnvironmentalOpen in IMG/M
3300001471Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2EnvironmentalOpen in IMG/M
3300001593Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2EnvironmentalOpen in IMG/M
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005591Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1EnvironmentalOpen in IMG/M
3300005602Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2EnvironmentalOpen in IMG/M
3300005921Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6EnvironmentalOpen in IMG/M
3300005944Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048EnvironmentalOpen in IMG/M
3300005994Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049EnvironmentalOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300006794Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107EnvironmentalOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300006893Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaGEnvironmentalOpen in IMG/M
3300009029Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189EnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009520Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaGEnvironmentalOpen in IMG/M
3300009522Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaGEnvironmentalOpen in IMG/M
3300009618Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_100EnvironmentalOpen in IMG/M
3300009623Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10EnvironmentalOpen in IMG/M
3300009624Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10EnvironmentalOpen in IMG/M
3300009665Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10EnvironmentalOpen in IMG/M
3300009672Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaGEnvironmentalOpen in IMG/M
3300009764Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012683Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300014169Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaGEnvironmentalOpen in IMG/M
3300014489Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaGEnvironmentalOpen in IMG/M
3300014498Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaGEnvironmentalOpen in IMG/M
3300014501Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014838Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300015193Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb6, proglacial stream)EnvironmentalOpen in IMG/M
3300017822Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2EnvironmentalOpen in IMG/M
3300017925Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40EnvironmentalOpen in IMG/M
3300018024Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100EnvironmentalOpen in IMG/M
3300018033Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10EnvironmentalOpen in IMG/M
3300018034Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10EnvironmentalOpen in IMG/M
3300018035Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10EnvironmentalOpen in IMG/M
3300019888Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300021046Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depthEnvironmentalOpen in IMG/M
3300021171Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-MEnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300021180Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-OEnvironmentalOpen in IMG/M
3300021401Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-OEnvironmentalOpen in IMG/M
3300021405Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-OEnvironmentalOpen in IMG/M
3300021407Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-OEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021474Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-OEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300022557Paint Pots_combined assemblyEnvironmentalOpen in IMG/M
3300022726Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300023019Soil microbial communities from Bohemian Forest, Czech Republic ? CSU1EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300027565Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027591Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027674Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027727Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027853Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)EnvironmentalOpen in IMG/M
3300027889Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300028047Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300028798Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_2EnvironmentalOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300029914III_Bog_E2 coassemblyEnvironmentalOpen in IMG/M
3300029951III_Palsa_N1 coassemblyEnvironmentalOpen in IMG/M
3300030007I_Palsa_E1 coassemblyEnvironmentalOpen in IMG/M
3300030399II_Palsa_E2 coassemblyEnvironmentalOpen in IMG/M
3300030687Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_1EnvironmentalOpen in IMG/M
3300030760Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031090Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031234Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2EnvironmentalOpen in IMG/M
3300031236Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1EnvironmentalOpen in IMG/M
3300031249Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaGHost-AssociatedOpen in IMG/M
3300031261Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_1EnvironmentalOpen in IMG/M
3300031525Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3EnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031753Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515EnvironmentalOpen in IMG/M
3300033829Peat soil microbial communities from Stordalen Mire, Sweden - 715 P2 1-5EnvironmentalOpen in IMG/M
3300034163Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12664J13189_100233833300001082Forest SoilSDGTALSVGQPHLRVPGEMALRCQCAAVACSFITLAAWVRQLPFWLLKSRVVTEYLQSGHLNLLKPFIIVMV*
JGI20176J14865_10175313300001416Arctic Peat SoilMGLGPPCAARACSFITLAACVRQLPFWLLNSRVVTECVHSRHLKLLKPFIILIV*
JGI12712J15308_1000154733300001471Forest SoilMLSPGVLFIALAAWVRQFPFWLLKSRVFTECLQSGHLNLEKPFIILMV*
JGI12635J15846_1018522943300001593Forest SoilMGEGRPCATVACSFIALAAWVRQLPFWLLNSSVVTECLQSRHLNVAKPFIILMV*
JGI12635J15846_1085891213300001593Forest SoilMGMGRPCSAVACSFIALAAWVRQLPFSLLKSRVVTECLQS
JGIcombinedJ26739_10029170623300002245Forest SoilVACSFIARAACVRQFPFWLLNSRVLTECLQIGHLNMEKLFIILIV*
JGIcombinedJ26739_10041187523300002245Forest SoilMGMGRPCSAVACWFIVLAAWVRQLPFSLLNSRVVTECLQTGHLKVLKPFIILTV*
JGIcombinedJ26739_10127679013300002245Forest SoilPFIASDGTALSAGEPHLRVLGDMAVRCQCAAVACSFITLAAWVRQLPFWLLNSRVVTEYLQSGHLNLLKPFIIVMV*
JGIcombinedJ26739_10141511013300002245Forest SoilMGIGLPCAAVAWSFIALAAWVRQLPFWLLNSRVVTECLQRTHLNV
JGIcombinedJ26739_10166312033300002245Forest SoilMGKGWPCATAACSFTVLAARVLHLQFSPLNSIVVTECLQTGRLNLAKPFIILMV*
Ga0070708_10002376443300005445Corn, Switchgrass And Miscanthus RhizosphereVACSFIAFAAWVRQLPFWLLNSRVVTECLQSGHLNVEKPFIVLMV*
Ga0070707_10003340073300005468Corn, Switchgrass And Miscanthus RhizosphereMGRLCVAVACSFIAFAAWVRQLPFWLLNSRVVTECLHSGHLNVLKPLIILIV*
Ga0070707_10058076533300005468Corn, Switchgrass And Miscanthus RhizosphereSRDDMGAGKPCAAAACSFIALAAWVRQFPSWLLNSRVVTECLQSGHLNVEKPFIILMV*
Ga0070697_100008476103300005536Corn, Switchgrass And Miscanthus RhizosphereCVAVACSFIAFAAWVRQLPFWLLNSRVVTECLHSGHLNVLKPLIILIV*
Ga0070761_10000085393300005591SoilMGTGWPCAALACSFITLAAWVRQLPFWLLNSCVVTECLQSGHLNVVEPLIVLIV*
Ga0070761_10001681123300005591SoilVPLGDMAARYPCAAVACSFITLAAWVRQLPFWLLNSRVVTEYLQSGHLNVLKPLIIIMV*
Ga0070761_1026616423300005591SoilSFIVLAAWVRQLPFKLLNSRVVTECLQSRHLNMLKPFIILMV*
Ga0070762_1009012213300005602SoilALSVGQPHLRVTGEMALRCQCAAVACSFITLAAWVRQLPFWLLKSRVVTEYLQSGHLNLLKPFIIVMV*
Ga0070766_1001391593300005921SoilGNVGLLRAAVACSFIALAAWVRRLPFSPLNCDIVTECLQRGHLNVVAPLINLME*
Ga0070766_1008977333300005921SoilMGLAQPCAAVACSFIALAAWVRQLPFWLLNSRVVTEYLQIRHLNVLKEFMILMV*
Ga0066788_1002172013300005944SoilMGVGKRCAAAACSFIALAAWVRQFPSWLLKSRVVTECLQSGHLKMEKPFIILMV*
Ga0066789_1022519023300005994SoilMGAGQPCAAVACSFIALAARVRQLPFWLLKSRVVTVCLQSGHLNVAKPFIILIV*
Ga0070717_1006692213300006028Corn, Switchgrass And Miscanthus RhizosphereSVLHAYPCAAAACSFITLAAWVRQLPFWLLKSRVVTEYLQSGHLNVLKPFIIVMV*
Ga0070717_1016427623300006028Corn, Switchgrass And Miscanthus RhizosphereMGVPNLRISGDMGMGRLCAAVACSFIAFAAWVRQLPFWLLNSRVVVECLHSRHLNVLKPFIILMV*
Ga0070717_1031084423300006028Corn, Switchgrass And Miscanthus RhizosphereMGAGKRCAAAACSFIALAAWVRQFPSWLLKSRVVTECLQCGHLNVEKPFIILMV*
Ga0070765_10003031743300006176SoilMGMGRPCSAVACSFIALAAWVRQLPFSLLNSRVVTQCLQTGHLNALKPCIILTV*
Ga0070765_10054339523300006176SoilMGAGTRCASAACSFIALAAWVRQFPFWLLKSRVVTECLQSGHLKVENPFIILIV*
Ga0066658_1086840313300006794SoilMGVERLCAATACSFIVFAAWVRQLPFWLLNSRVVTECLHSRHLNVLKPFIIL
Ga0079221_1034982413300006804Agricultural SoilAACSFIALAAWVRQFPSWLLKSRVVTECLQSGHLNVEKPFIILMV*
Ga0073928_10006824113300006893Iron-Sulfur Acid SpringMGAGKPCAAAACSFIALAAWVRQFPSWLLNSRVVTECLQSGHLNMEKPFIILMV*
Ga0073928_1002498893300006893Iron-Sulfur Acid SpringMYSNGVPFIALAAWVRQLPFWALNSRVVTECLQSTHLNLLSPFIILMV*
Ga0073928_1006026653300006893Iron-Sulfur Acid SpringMGKGRPCATVACSFIALAAWVRRLPFWLLNSSVVTECLQSGHLNVAKPFINLMV*
Ga0066793_1085791913300009029Prmafrost SoilVFAAGGANTGRPCAAVACSFIALAAWVRQLPFWLLNSRVVTECLQSGHLNVEKPFIILMV
Ga0099830_1025240233300009088Vadose Zone SoilMGRLCVAVACSFIAFAAWVRQLPFWLLNSRVVTECLHSGHLNVLKP
Ga0099830_1028829213300009088Vadose Zone SoilMGMGRLCAAVACSFIAFAAWVRQLPFWLLNSRVVTECLHSGHLNVLKP
Ga0099792_1042238323300009143Vadose Zone SoilMGMERLCAAVACSFIAFAAWVRQLPFWLLNSRVVMECLHSRHLNVLKPFIILMV*
Ga0116214_136295823300009520Peatlands SoilGRPCAAVACSFIALAAWVRQLPFWLLNSRVVTECLQRRHLNVLKPFIILMV*
Ga0116218_1000741223300009522Peatlands SoilVACSFIALAAWVRRLPFWLLNSNMVTECLQRWQVNVAKPLTILMA*
Ga0116127_111358423300009618PeatlandFITLAAWVRQLPFWLLNSRVVTEYLQSGHLNVLKPLIIAMV*
Ga0116133_100626353300009623PeatlandVACSFIALAAWVRHLQFSPLKSIVVTECLQSLHLNIAKPFIILMV*
Ga0116105_107160413300009624PeatlandRYPCEAAACSFITLAAWVRQLPFWLLNSRVVTEYLQSGHLNVLKPLIIAMV*
Ga0116135_101753813300009665PeatlandIAFAAWVRQLPFRLLKSCVVTKCLHSGQLNTLKLFIFLMV*
Ga0116215_148056213300009672Peatlands SoilINGDSRIERAYHICASCGDTGMGRPCAAVACSFIALAAWVRQLPFWLLNSRVVTECLQRRHLNVLKPFIILMV*
Ga0116134_102149833300009764PeatlandMGVGRPCAAVACSFIALAAWVRQLPFWLLKSRVVTECLQSGHLNMAKPFIILME*
Ga0136449_10050278053300010379Peatlands SoilFIALAAWVRQLPFWLLKSRVVTECLQRWHLNVLKPFIILMV*
Ga0150983_1284616713300011120Forest SoilPCAAVACSFIALAAWVRRLPFWLLKSNVVTECLQRWHVKVVKPCIILIV*
Ga0137392_1011915253300011269Vadose Zone SoilMGRLCAAVACSFIAFAAWVRQLPFWLLNSRVVTECLHSGHLNVLKPLIILIV*
Ga0137391_1061302713300011270Vadose Zone SoilMGMGRLCAAVACSFIAFAAWVRQLPFWLLNSRVVTECLHCRHLNVLKPFI
Ga0137388_1115951213300012189Vadose Zone SoilVAKRVKGRPCATVACSFIALAAWVRQLPFCLLNSRVVTECLQSSQLNLAKPFIILMV*
Ga0137363_1061025913300012202Vadose Zone SoilHICASRGDMGMGRLCAAVACSFIAFAAWVRQLPFWLLNSRVVTECLHCRHLNVLKPFIILMV*
Ga0137361_1101986623300012362Vadose Zone SoilALAAWVRQFPSWLLNSRVVTECLQSGHLNVEKPFIILMV*
Ga0137398_1079445423300012683Vadose Zone SoilMGMGRLCAAVACSFIAFAAWVRQLPFWLLNSRVVTECLHCRHLNVLKPFIILMV*
Ga0137395_1016828733300012917Vadose Zone SoilMGIGRLCAAVACWFIAFAAWVRQLPFWLLNSRVVTECLHTRHLNMLKPFIILMV*
Ga0137395_1073510513300012917Vadose Zone SoilMGVERLCAATACSFIVFAAWVRQLPFWLLNSRVVTECLHSGHLNVLKPLII
Ga0137396_1115191013300012918Vadose Zone SoilVACSFIAFAAWVRQLPFWLLNSRVVMERLHSRHLNLLKPFIILIV*
Ga0137359_1159853013300012923Vadose Zone SoilATRGEIGEERPCATVAWSFIALAAWVRQLPFWLLNSSVVTECLQSGHLNLAKPFIILMV*
Ga0181531_1012068313300014169BogMGGEGQCAAVAWSFIALAAWVRQLPFWLLNSRVVTEYLQSGHLKIEKPCIVMIV*
Ga0182018_1000305533300014489PalsaMEQSCAAVACSFIVLAAWVRQLPFRLLKSRVVTERLQSRHENTLKPFIILMV*
Ga0182018_1029102713300014489PalsaSGDMGVERACAAVACSFIALAAWLRRLPFWVPNSCVVTEYLQSGHLNMLKPFIIVTV*
Ga0182019_1020089413300014498FenIARERPCTAAACSFIALAAWVRQFPFWLLNSRVVTECLQSGHLNVEKPCIILMV*
Ga0182024_1019764823300014501PermafrostMSTGRPCAAVACSFIALAAWVRQLPLWLLNSRVVTECLQSGHLKVLKPFIIVMV*
Ga0182030_1025549013300014838BogMYTGRPCAAAACSFIAFAAWVRQLPFRLLKSCVVTKCLHSGQLNMLKLFIILMV*
Ga0167668_100361343300015193Glacier Forefield SoilMGKGRPCATVACSFIALAAWVRQLPFWLLNSRVVTECLQSGQLNLAKPLIILMV*
Ga0187802_1032961923300017822Freshwater SedimentTAVACTFIARAAWMRRLPFWLLNSNMVTECLQCGQLNVIKPCFILIV
Ga0187856_102643013300017925PeatlandMGMGRPCAAVACSFIALAAWVRQLPFWLLNSCVVTECLQSGHLNVLNPFIILTV
Ga0187881_1014188013300018024PeatlandAAWVRQLPFWLLKSRVVTECLKSLHLNIAKPFIILMV
Ga0187867_1000329283300018033PeatlandVACSFIALAAWVRHLQFSPLKSIVVTECLQSLHLNIAKPFIILMV
Ga0187863_1051663923300018034PeatlandMGVGQPCAAVACSFIALAAWVRHLQFSPLKSIVVTEWLQSEHSNLAKPFIILMA
Ga0187875_1001992373300018035PeatlandACSFIALAAWVRHLQFSPLKSIVVTECLQSLHLNIAKPFIILMV
Ga0187875_1013255043300018035PeatlandAWVRQLPFKLLKSRVVRERLQSRHVNTLKPFIILMV
Ga0193751_1000696273300019888SoilMGKGRPCTTVACSFIALAAWVRQLPFWLLNSRVVTECLQSGHLNLARPFIILIV
Ga0193751_100076563300019888SoilVACSFIALAAWVRQLPFWLLNSRVVTECLQSRQLNLAKPFIILMV
Ga0210407_1000541723300020579SoilMGKGQPCANVACSFIALAAWARQLPFRLPNSRVVTECLQSGQLNLAKPFIILMV
Ga0210407_1049128823300020579SoilMGRPCTAAACSFIDLAAWVRRLPFWLLNSSVLTECLQRWQVNVVRSRS
Ga0210403_1001162453300020580SoilMGKGQPCANVACSFIALAAWARQLPFRLPNSRVVTECLQSGQLNLAKPFITLMV
Ga0215015_1096002033300021046SoilMGAGNPCAAAACSFIALAAWVRQFPSWLLNSRVVTECLQSGHLNVEKPFIILMV
Ga0210405_1031266223300021171SoilAVACSFIALAAWVRQLPFWLLNSRVVTECLQTRQLNLAKPLIILMV
Ga0210408_1028889723300021178SoilMAWPCGVAACSFIALATWAQRLAFRLPNSNVLTECLQRWQVKVAEPLMVLMV
Ga0210396_1013601353300021180SoilMGDGRPCSAAACSFIALAAWVRQLPFWLLNSRVVTECLQTRQLNFAKPLIILMV
Ga0210393_10000296173300021401SoilMKFTQPCATIACSFIALAAWLRQLPFCLLNSRVVTECLQYTHLNVVIPLIILVV
Ga0210393_1000421533300021401SoilMGKGLLCTAAACWFIALAAWVRRLPFWLLNSDVVTECLQRGQVNVVKPWIISML
Ga0210393_1003287313300021401SoilMGTGRPCSVLACSFIALAAWVRQFPFWLLKSRVFTECLQSGHLNLEKPFIILMV
Ga0210393_1017431313300021401SoilTVVTCSFIALAAWVRRLPFRPLKSNVVTEYLQLWHVNVATPFITLML
Ga0210387_1021791213300021405SoilASRNDMGTGRPCSVLACSFIALAAWVRQFPFWLLKSRVFTECLQSGHLNLEKPFIILMV
Ga0210383_1120205713300021407SoilMGLAQPCAAVACSFIALAAWVRQLPFWLLNSRVVTEYLQIRHLNVLKEFMILMV
Ga0210384_1027615323300021432SoilMGVGRPWAAEACSFIALAAWVRQLPFWLLNSCVVTECLQRGHLKVVNPPIVLMV
Ga0210390_1015969943300021474SoilAVACSFIALAAWVRQLPFSLLNSRVVTECLQSGHLNVLKPFIILTV
Ga0210402_10000865123300021478SoilMGKGHPCANVACSFIALAAWARQLPFRLPNSRVVTECLQSGQLNLAKPFIILMV
Ga0210402_1010470833300021478SoilMGMGRLCAAVACSFIAPAAWVRQLPFWLLNSRVVTECLHSGHLNVLKPFIIVMV
Ga0210410_100000031923300021479SoilMGRPCAAVACSFIALAAWVRQLPFWLLNSCVVTECLQRGHLKVVNPPMVLMV
Ga0210409_1009824633300021559SoilMGWPCAAVPCSFIALAACVRQLPFWLLNSSVVTKCSQSGHLKVVKPSIILMV
Ga0212123_10024519153300022557Iron-Sulfur Acid SpringMGKGRPCATVACSFIALAAWVRRLPFWLLNSSVVTECLQSGHLNVAKPFINLMV
Ga0212123_1038863923300022557Iron-Sulfur Acid SpringMGMGRLCTAVACSFITFAAWVRQLPFWLLNSRVVTECLHSRHLNVLKPFIILMV
Ga0242654_1003688713300022726SoilMAVGRPCAAEACSFIALAAWVRQLPFWLLNSCVVTECLQRGHLKVVNPPIV
Ga0224560_10493913300023019SoilACSVCASCGDVSMGRLCAAAACSFIALAAWVRQLPFWLLNSRVVTEWLQSGHLNVLKPFIILMV
Ga0207684_1016670943300025910Corn, Switchgrass And Miscanthus RhizosphereFAAWVRQLPFWLLNSRVVTECLHSGHLNVLKPLIILIV
Ga0207646_1005107153300025922Corn, Switchgrass And Miscanthus RhizosphereMGAGKPCAAAACSFIALAAWVRQFPSWLLNSRVVTECLQSGHLNVEKPFIILMV
Ga0207646_1011786623300025922Corn, Switchgrass And Miscanthus RhizosphereMGRLCVAVACSFIAFAAWVRQLPFWLLNSRVVTECLHSGHLNVLKPLIILIV
Ga0209648_1013766013300026551Grasslands SoilMGMGRLCAAVACSFIAFAAWVRQLPFWLLNSRVVVECLHSRHLNVLKPFIILMV
Ga0209219_100360613300027565Forest SoilMGMGRPCAAVACSFIALAAWVRQLPFWLLNSRVVTECLQSGHLNVLKPFIILMV
Ga0209219_104390823300027565Forest SoilMGMGRLCAAVACSFIAFAAWVRQLPFWLLNSRVVTECLHSRHLNVLKPFIILMV
Ga0209733_101753923300027591Forest SoilMGEGRPCATVACSFIALAAWVRQLPFWLLNSSVVTECLQSRHLNVAKPFIILMV
Ga0209118_100368053300027674Forest SoilMGDGRPCSAVACSFIALAAWVRQLPFWLLNSRVVTECLQTRQLNLAKPFMILMV
Ga0209328_1025176013300027727Forest SoilFAAWVRQLPFWLLKSRVVTECLHSRHLNVLKPFILFAV
Ga0209274_1071992513300027853SoilFITLAAWVRQLPFWLLNSRVVTEYLQSGHLNVLKPLIIIMV
Ga0209380_1015756823300027889SoilMGRAQSVPHAVTREWRPWAALACSFIALAAWVRQLPFWLLNSRAVTECLQSGQLNVLRPFVILTV
Ga0209488_1080649213300027903Vadose Zone SoilMGMERLCAAVACSFIAFAAWVRQLPFWLLNSRVVMECLHSRHLNVLKPFIILMV
Ga0209526_1003542153300028047Forest SoilCSFIALAACLRQLPFWLLNSSVVTERSQSGHLKVVKPFIILML
Ga0209526_1030371723300028047Forest SoilFIAFAAWVRQLPFWLLNSRVVTECLHSRHLNVLKPCIILMV
Ga0209526_1037202623300028047Forest SoilMGMGRLCAAVACSFIALAAWVRQLPFWLLNSRVVTECLHSRHLKVLKPCIILMV
Ga0137415_10003479153300028536Vadose Zone SoilMGMGRLCAAVACSFIAFAAWVRQLPFRLLNSRVVTECLHSRHLNVLKPFIILMV
Ga0302222_1009763033300028798PalsaMSIERACAAVACSFIALAAWVRRLPFWVTNSCVVTEYLQSGHLNMLKPFIIVTV
Ga0308309_1048945123300028906SoilMGKGLLCTAAACSFIALAAWVRRLPFSALKSNVVTEYLQFGQVNVVKPWISLML
Ga0308309_1157736713300028906SoilMGAGTRCASAACSFIALAAWVRQFPFWLLKSRVVTECLQSGHLKVENPFIILIV
Ga0311359_1025760813300029914BogMYTGRPCAAAACSFIAFAAWVRQLPFRLLKSCVVTKCLHSGQLNMLKLFIILMV
Ga0311371_1051984013300029951PalsaMGQPCAAVACSFIALAAWVRQLPLLKCRVVRECLQSWHLNV
Ga0311371_1176701313300029951PalsaVTREWGGPCAAAACSFIALAAWVRQLPFWLLKSRVVTECLQIGHLNVLKPFIIVMV
Ga0311338_1201125613300030007PalsaNDTGMGQPCATVACSFIALAAWVRQLPFRLLKSRVVREFLQCGHVNTLKPFIILMV
Ga0311353_1169290013300030399PalsaMGTGWPCAAVAWSFIALAAWVRRLPFWLLNSCAVTECLQSGHLNVVTPFIVLMV
Ga0302309_1061617523300030687PalsaGDTALEPPCVAVACSFITLAACVRQLPFRLLNSRVVTECLQSTHLNMLKPLIILIV
Ga0265762_100115373300030760SoilAAWVRQFPFWLLKSRVFTECLQSGHLNLEKPFIILMV
Ga0265760_1009588533300031090SoilACSFIALAAWVRQLPFKLLKSRVVRECLQSWHLNVLEPFIILIV
Ga0302325_1008857443300031234PalsaMGRLCVAAACSFIALAAWVRQLPLWLLKSRVVTECLQSGHLNVLKPVIIVMV
Ga0302325_1077212213300031234PalsaMEQSCAAVACSFIVLAAWVRQLPFRLLKSRVVTERLQSRHENTLKPFIILMV
Ga0302324_10000770553300031236PalsaVACSFIALAAWVRRLPFWVPNSCVVTEYLQSGHLNMLKPFIIVTV
Ga0302324_10002452413300031236PalsaVACSFITLAACVRQLPFRLLNSRVVTECLQSTHLNMLKPLIILIV
Ga0302324_10008612393300031236PalsaWSGHVQPWRASFIALAAWVRRLPFWVSNSCVSTEYLHSGHLNMLKPFIIVTV
Ga0265339_1025044513300031249RhizosphereVAWSFIALAAWVRQLPFWLLKSRVVTEYLQRGHLNIEKPCIVMIE
Ga0302140_1109227023300031261BogFIAFAAWVRQLPFRLLKSCVVTKCLHSGQLNTLKLFIFLMV
Ga0302326_1141510213300031525PalsaMGQPCAAVAHSFIVLAAWVRQLPFKLLKSRVVTERLQSRH
Ga0302326_1302410013300031525PalsaMGIRRPCAATACSFITLAAWVRQLPFWLLKSRVVTECLQ
Ga0310686_10247919413300031708SoilICASRGDMGMRRLCATVACSFIALAAWVRQLPFWLLNSRVVTECLHSGHLNVLKPFIILM
Ga0307477_1006205943300031753Hardwood Forest SoilMGVGRLCAATACSFIVLAAWVRQLPFWLLNSRVVTECLHRRHLNVLKPFIILMV
Ga0334854_003788_2387_25453300033829SoilMGQPCAAVAYSFIVLAAWVRQLPFKLLKSRVVTERLQSRHENTLKPFIILML
Ga0334854_049362_688_8463300033829SoilMGRPCVAAACSFIALAAWVRQLPLWLLKSRVVTECLQSGHLNMLKPVIIVMV
Ga0370515_0165748_177_3353300034163Untreated Peat SoilMGRPCVAAACSFIALAAWVRQLPLWLLKSRVVTECLQSGHLKVLKPVIIVIV

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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