Metagenome / Metatranscriptome Family F057556

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F057556
Family Type	Metagenome / Metatranscriptome
Number of Sequences	136
Average Sequence Length	56 residues
Representative Sequence	MLRCAVLKVSVGTALRKFRNPALRSPPGSGAGPILIAGCGGKLSASFSKNAWRSGYSI
Number of Associated Samples	105
Number of Associated Scaffolds	136

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	9.70 %
% of genes near scaffold ends (potentially truncated)	50.00 %
% of genes from short scaffolds (< 2000 bps)	76.47 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.19

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (95.588 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (32.353 % of family members)
Environment Ontology (ENVO)	Unclassified (41.912 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (52.206 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 19.77% β-sheet: 0.00% Coil/Unstructured: 80.23%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.19
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.19
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 136 Family Scaffolds
PF09990	DUF2231	11.03
PF07992	Pyr_redox_2	10.29
PF13473	Cupredoxin_1	7.35
PF02416	TatA_B_E	3.68
PF00296	Bac_luciferase	2.21
PF00027	cNMP_binding	1.47
PF01471	PG_binding_1	1.47
PF02784	Orn_Arg_deC_N	1.47
PF11199	DUF2891	1.47
PF04471	Mrr_cat	0.74
PF00149	Metallophos	0.74
PF08281	Sigma70_r4_2	0.74
PF13801	Metal_resist	0.74
PF00155	Aminotran_1_2	0.74
PF14237	GYF_2	0.74
PF04542	Sigma70_r2	0.74
PF11138	DUF2911	0.74
PF00011	HSP20	0.74
PF13478	XdhC_C	0.74
PF13668	Ferritin_2	0.74
PF01007	IRK	0.74
PF12439	GDE_N	0.74
PF04945	YHS	0.74
PF02535	Zip	0.74
PF13884	Peptidase_S74	0.74
PF01425	Amidase	0.74
PF03734	YkuD	0.74

COG ID	Name	Functional Category	% Frequency in 136 Family Scaffolds
COG1826	Twin-arginine protein secretion pathway components TatA and TatB	Intracellular trafficking, secretion, and vesicular transport [U]	3.68
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	2.21
COG0019	Diaminopimelate decarboxylase	Amino acid transport and metabolism [E]	1.47
COG1166	Arginine decarboxylase (spermidine biosynthesis)	Amino acid transport and metabolism [E]	1.47
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	0.74
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.74
COG0428	Zinc transporter ZupT	Inorganic ion transport and metabolism [P]	0.74
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.74
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.74
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	0.74
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.74
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	0.74
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.74

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.59 %
Unclassified	root	N/A	4.41 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.59 %
Unclassified	root	N/A	4.41 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.59 %
Unclassified	root	N/A	4.41 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	43.38 %
Unclassified	root	N/A	4.41 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	2.94 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.74 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.74 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.74 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.74 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	43.38 %
Unclassified	root	N/A	4.41 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	2.94 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.74 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.74 %
unclassified Nitrospirae	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae	0.74 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.74 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	34.56 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	7.35 %
Unclassified	root	N/A	4.41 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2.94 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.74 %
Rhodocyclales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales	0.74 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	0.74 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.74 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	34.56 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	7.35 %
Unclassified	root	N/A	4.41 %
Cytophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia	1.47 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	0.74 %
unclassified Bacteroidetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes	0.74 %
Rhodocyclaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae	0.74 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.74 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.74 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	34.56 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	6.62 %
Unclassified	root	N/A	4.41 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	1.47 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.74 %
unclassified Chthoniobacterales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales	0.74 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	0.74 %
Pyrinomonas	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas	0.74 %
Rhodocyclaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae	0.74 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.74 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	34.56 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	6.62 %
Unclassified	root	N/A	4.41 %
Cytophagaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae	1.47 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	0.74 %
Pyrinomonas methylaliphatogenes	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	0.74 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.74 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	0.74 %
Rhodocyclaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae	0.74 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.74 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	34.56 %
Unclassified	root	N/A	4.41 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	3.68 %
Cytophagaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae	1.47 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	0.74 %
Pyrinomonas methylaliphatogenes	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	0.74 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.74 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	0.74 %
Rhodocyclaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae	0.74 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.74 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_101790225	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	820	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101824335	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300000955\|JGI1027J12803_100728570	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1792	Open in IMG/M
3300001867\|JGI12627J18819_10484252	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	508	Open in IMG/M
3300002245\|JGIcombinedJ26739_100167920	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2075	Open in IMG/M
3300002914\|JGI25617J43924_10033099	All Organisms → cellular organisms → Bacteria	1847	Open in IMG/M
3300005171\|Ga0066677_10048013	All Organisms → cellular organisms → Bacteria	2123	Open in IMG/M
3300005171\|Ga0066677_10729034	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300005174\|Ga0066680_10033275	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2932	Open in IMG/M
3300005178\|Ga0066688_10708993	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M
3300005332\|Ga0066388_100054280	All Organisms → cellular organisms → Bacteria	4162	Open in IMG/M
3300005439\|Ga0070711_101738642	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300005445\|Ga0070708_100444778	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1222	Open in IMG/M
3300005445\|Ga0070708_100626983	All Organisms → cellular organisms → Bacteria	1013	Open in IMG/M
3300005445\|Ga0070708_101865013	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	557	Open in IMG/M
3300005447\|Ga0066689_10170276	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae	1306	Open in IMG/M
3300005451\|Ga0066681_10127041	All Organisms → cellular organisms → Bacteria	1481	Open in IMG/M
3300005467\|Ga0070706_100257439	All Organisms → cellular organisms → Bacteria	1629	Open in IMG/M
3300005467\|Ga0070706_100581160	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1041	Open in IMG/M
3300005467\|Ga0070706_101711410	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	572	Open in IMG/M
3300005468\|Ga0070707_100041290	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	4415	Open in IMG/M
3300005468\|Ga0070707_100256001	All Organisms → cellular organisms → Bacteria	1703	Open in IMG/M
3300005468\|Ga0070707_100582187	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae	1081	Open in IMG/M
3300005468\|Ga0070707_100923328	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	837	Open in IMG/M
3300005471\|Ga0070698_100023076	All Organisms → cellular organisms → Bacteria	6506	Open in IMG/M
3300005471\|Ga0070698_100426664	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae	1260	Open in IMG/M
3300005518\|Ga0070699_101104065	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	728	Open in IMG/M
3300005536\|Ga0070697_101209037	All Organisms → cellular organisms → Bacteria	674	Open in IMG/M
3300005536\|Ga0070697_101954957	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	525	Open in IMG/M
3300005545\|Ga0070695_101647914	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	536	Open in IMG/M
3300005554\|Ga0066661_10405195	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	835	Open in IMG/M
3300005557\|Ga0066704_10142796	All Organisms → cellular organisms → Bacteria	1601	Open in IMG/M
3300005559\|Ga0066700_10656423	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300005576\|Ga0066708_10865901	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	564	Open in IMG/M
3300005764\|Ga0066903_100004553	All Organisms → cellular organisms → Bacteria	11758	Open in IMG/M
3300006028\|Ga0070717_10297422	All Organisms → cellular organisms → Bacteria	1434	Open in IMG/M
3300006028\|Ga0070717_11212997	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300006028\|Ga0070717_11500275	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300006175\|Ga0070712_101539721	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	581	Open in IMG/M
3300006797\|Ga0066659_11046425	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300009029\|Ga0066793_10101894	All Organisms → cellular organisms → Bacteria	1664	Open in IMG/M
3300009038\|Ga0099829_10865508	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	750	Open in IMG/M
3300009038\|Ga0099829_11291848	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300009089\|Ga0099828_10273339	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1517	Open in IMG/M
3300009137\|Ga0066709_101915698	All Organisms → cellular organisms → Bacteria	824	Open in IMG/M
3300010159\|Ga0099796_10049836	All Organisms → cellular organisms → Bacteria	1449	Open in IMG/M
3300010159\|Ga0099796_10120659	All Organisms → cellular organisms → Bacteria	1007	Open in IMG/M
3300010360\|Ga0126372_13083969	Not Available	517	Open in IMG/M
3300010373\|Ga0134128_10491647	All Organisms → cellular organisms → Bacteria	1368	Open in IMG/M
3300010375\|Ga0105239_12400327	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300011269\|Ga0137392_10170103	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1769	Open in IMG/M
3300011269\|Ga0137392_10504804	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1005	Open in IMG/M
3300011269\|Ga0137392_11365265	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	568	Open in IMG/M
3300011271\|Ga0137393_10020600	All Organisms → cellular organisms → Bacteria	4810	Open in IMG/M
3300012189\|Ga0137388_11978187	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	511	Open in IMG/M
3300012198\|Ga0137364_10482653	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	931	Open in IMG/M
3300012202\|Ga0137363_10108978	All Organisms → cellular organisms → Bacteria	2118	Open in IMG/M
3300012202\|Ga0137363_10155114	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	1802	Open in IMG/M
3300012202\|Ga0137363_11272962	Not Available	623	Open in IMG/M
3300012202\|Ga0137363_11525876	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300012205\|Ga0137362_10054697	All Organisms → cellular organisms → Bacteria	3265	Open in IMG/M
3300012207\|Ga0137381_11507374	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	564	Open in IMG/M
3300012209\|Ga0137379_10341821	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1406	Open in IMG/M
3300012356\|Ga0137371_10080742	All Organisms → cellular organisms → Bacteria	2523	Open in IMG/M
3300012359\|Ga0137385_10514910	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	1012	Open in IMG/M
3300012362\|Ga0137361_10067970	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3006	Open in IMG/M
3300012362\|Ga0137361_10957346	All Organisms → cellular organisms → Bacteria	775	Open in IMG/M
3300012582\|Ga0137358_10892435	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300012683\|Ga0137398_10345339	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1007	Open in IMG/M
3300012683\|Ga0137398_10854181	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	636	Open in IMG/M
3300012899\|Ga0157299_10330327	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	516	Open in IMG/M
3300012908\|Ga0157286_10460410	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	507	Open in IMG/M
3300012918\|Ga0137396_10060999	All Organisms → cellular organisms → Bacteria	2614	Open in IMG/M
3300012918\|Ga0137396_10793093	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300012923\|Ga0137359_10051470	All Organisms → cellular organisms → Bacteria	3581	Open in IMG/M
3300012923\|Ga0137359_10126165	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2273	Open in IMG/M
3300012923\|Ga0137359_10502641	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	1070	Open in IMG/M
3300012923\|Ga0137359_11688298	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	521	Open in IMG/M
3300012927\|Ga0137416_10639266	All Organisms → cellular organisms → Bacteria	930	Open in IMG/M
3300012944\|Ga0137410_11078627	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300013832\|Ga0120132_1072152	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	695	Open in IMG/M
3300015077\|Ga0173483_10107960	All Organisms → cellular organisms → Bacteria	1171	Open in IMG/M
3300015241\|Ga0137418_10033245	All Organisms → cellular organisms → Bacteria	4768	Open in IMG/M
3300015242\|Ga0137412_11078204	Not Available	570	Open in IMG/M
3300015245\|Ga0137409_10721404	All Organisms → cellular organisms → Bacteria	832	Open in IMG/M
3300016341\|Ga0182035_10769288	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	843	Open in IMG/M
3300018433\|Ga0066667_11089918	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	691	Open in IMG/M
3300018468\|Ga0066662_10359541	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1257	Open in IMG/M
3300019356\|Ga0173481_10472847	Not Available	632	Open in IMG/M
3300019887\|Ga0193729_1015516	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	3370	Open in IMG/M
3300019887\|Ga0193729_1084757	All Organisms → cellular organisms → Bacteria	1230	Open in IMG/M
3300019890\|Ga0193728_1008117	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	5310	Open in IMG/M
3300020006\|Ga0193735_1000846	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	9753	Open in IMG/M
3300020022\|Ga0193733_1003225	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	4717	Open in IMG/M
3300020170\|Ga0179594_10322012	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300020199\|Ga0179592_10400465	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300020579\|Ga0210407_10065233	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	2729	Open in IMG/M
3300021046\|Ga0215015_10625210	All Organisms → cellular organisms → Bacteria	1127	Open in IMG/M
3300021168\|Ga0210406_10084692	All Organisms → cellular organisms → Bacteria	2708	Open in IMG/M
3300021171\|Ga0210405_10051134	All Organisms → cellular organisms → Bacteria	3271	Open in IMG/M
3300021344\|Ga0193719_10049400	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1822	Open in IMG/M
3300021411\|Ga0193709_1034161	All Organisms → cellular organisms → Bacteria	1217	Open in IMG/M
3300021413\|Ga0193750_1000249	All Organisms → cellular organisms → Bacteria	15163	Open in IMG/M
3300021418\|Ga0193695_1000076	All Organisms → cellular organisms → Bacteria	15892	Open in IMG/M
3300021478\|Ga0210402_10529734	All Organisms → cellular organisms → Bacteria	1094	Open in IMG/M
3300022557\|Ga0212123_10251757	All Organisms → cellular organisms → Bacteria	1267	Open in IMG/M
3300024330\|Ga0137417_1071859	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	1671	Open in IMG/M
3300025885\|Ga0207653_10090859	All Organisms → cellular organisms → Bacteria	1069	Open in IMG/M
3300025910\|Ga0207684_10981877	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	707	Open in IMG/M
3300025915\|Ga0207693_10059035	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3005	Open in IMG/M
3300025915\|Ga0207693_10904536	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	677	Open in IMG/M
3300026035\|Ga0207703_11833703	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300026325\|Ga0209152_10371580	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300026332\|Ga0209803_1096712	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1213	Open in IMG/M
3300026360\|Ga0257173_1035224	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300026507\|Ga0257165_1110105	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	513	Open in IMG/M
3300026529\|Ga0209806_1178378	All Organisms → cellular organisms → Bacteria	775	Open in IMG/M
3300026555\|Ga0179593_1020116	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2254	Open in IMG/M
3300027635\|Ga0209625_1008671	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	2204	Open in IMG/M
3300027635\|Ga0209625_1156489	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	508	Open in IMG/M
3300027643\|Ga0209076_1216849	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	521	Open in IMG/M
3300027903\|Ga0209488_10152831	All Organisms → cellular organisms → Bacteria	1743	Open in IMG/M
3300028587\|Ga0247828_10565348	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300028828\|Ga0307312_10027977	All Organisms → cellular organisms → Bacteria	3267	Open in IMG/M
3300028878\|Ga0307278_10144064	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1068	Open in IMG/M
3300030842\|Ga0075404_11089852	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	502	Open in IMG/M
3300031128\|Ga0170823_10921942	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	822	Open in IMG/M
3300031231\|Ga0170824_122975842	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	689	Open in IMG/M
3300031446\|Ga0170820_17341051	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300031820\|Ga0307473_10244123	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1097	Open in IMG/M
3300031823\|Ga0307478_10002602	All Organisms → cellular organisms → Bacteria	13977	Open in IMG/M
3300032180\|Ga0307471_100335449	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1616	Open in IMG/M
3300032180\|Ga0307471_102393055	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	667	Open in IMG/M
3300033412\|Ga0310810_10890451	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	784	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.53%
Host-Associated	Host-Associated	1.47%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.79%
Plants	Host-Associated → Plants	1.47%
Aquatic	Environmental → Aquatic	0.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.79%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.74%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.74%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	72.79%
Loam	Environmental → Terrestrial → Soil → Loam	24.26%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.74%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.74%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	46.32%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	18.38%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	13.97%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.03%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.41%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.47%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.74%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.74%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.74%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.74%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	32.35%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	18.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	11.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.15%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.94%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.94%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.94%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.21%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.47%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.47%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.74%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.74%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.74%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.74%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.74%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013832	Permafrost microbial communities from Nunavut, Canada - A3_5cm_0M	Environmental	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300020006	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2	Environmental	Open in IMG/M
3300020022	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021411	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3c2	Environmental	Open in IMG/M
3300021413	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c1	Environmental	Open in IMG/M
3300021418	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s2	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026360	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-19-B	Environmental	Open in IMG/M
3300026507	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-B	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300027635	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300030842	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OB3 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1017902254	3300000364	Soil	MLRCAVLSISVGTAFRIFRDPGLRPPPKSGAGPILIAGCGDKLSASFS
INPhiseqgaiiFebDRAFT_1018243351	3300000364	Soil	TRMLRWAVHNVCVGTVLRRWRDPGLRTSLGRGAGPILIAGCEGKQSASLSKNAW*
JGI1027J12803_1007285702	3300000955	Soil	MLRCAVLSISVGTAFRIFRDPGLRPPPKSGAGPILIAGCGDKLSASFSKKA*
JGI12627J18819_104842521	3300001867	Forest Soil	MLRCAALKVSVGTALRIFRDPGLCSPLGSGAGPILIAGCGGKVSASFSKNAWRSGYSI*
JGIcombinedJ26739_1001679202	3300002245	Forest Soil	MLRCAVLSFSLGTALRMLRNPTRLVPLGSGAGPILTAGCSGKLCANFSKNAWRFGYNI*
JGI25617J43924_100330992	3300002914	Grasslands Soil	MLRCAVLSLSVGTALRIFRNPGLRSPLGSGAGPILTAGCGGKLCASFSKNAWRFGYNI*
Ga0066677_100480132	3300005171	Soil	MLRCAVLKVSVGTALRKFHNPALCSPPGNGAGPILIAGYGGKLSASFSKNAWRSGYSI*
Ga0066677_107290341	3300005171	Soil	CGLQLGFMLRCALLKVSVGTALRKFRNPALRSPPGSGAGPILIAGCGGKLSASFSKNAWRSGYSI*
Ga0066680_100332754	3300005174	Soil	MLRCAVLSISVGTAFRIFRDPGLRPPLKSGAGPILIAGCGDKLSASFSKKA*
Ga0066688_107089931	3300005178	Soil	MLRCAMLKLSVGTAFRKFRNPALRSPPGSGAGPILIAGCGGKLSASFSKNAWRSGYSI*
Ga0066388_1000542808	3300005332	Tropical Forest Soil	MLRCAVLSISVGTAFRIFRDPGLHPPLKSGAGPILIAGCGDKLSASFSKKA*
Ga0070711_1017386421	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MLRVAAMLLCAVLNVSVGTAFRMFRDPRLGSPPGSGAGPILIAGCKGKLNASLAKKAWRRS*
Ga0070708_1004447781	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MLRCAVLSLSVGTALRIFRNPGLRSPLGSGAGPILTAGCGGKLRASFSKNAWRFGYNI*
Ga0070708_1006269833	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MLRCAILKVSVGTAFRKFRNPALCFPAGSGAGLILIAGCGGKLSASFLKNAWRSGYSI*
Ga0070708_1018650132	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	LRCAVLSISVGTAFRIFRDPGLHPPLKSGADPILIAGCGDKLSASFSKKA*
Ga0066689_101702761	3300005447	Soil	MLLCAVLNVFVTASRIFRDPALRSPLGRGAGPIFNAGCGGKLSASFSKNAWRFGYDI*
Ga0066681_101270412	3300005451	Soil	MLRCAVLRVSVGTALRKFDNPALCSPLGSGAGPILIAGCGGKLSATFSKNARRSGYSI*
Ga0070706_1002574393	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MLRCAVLSLSVGTALRIFRNPGLRCPLGSGAGPILTAGCGGKLCASFSKNAWRFGYNI*
Ga0070706_1005811603	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	CAVLSISVGTAFRIFRDPGLHPPLKSGADPILIAGCGDKLSASFSKKA*
Ga0070706_1017114102	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	RLAFMLRCAVLSISVGTAFRIFRDPGLHPPLKSGADPILIAGCGDKLSASFSKKA*
Ga0070707_1000412904	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MLRCAVISLSVGTALRIFRNPGLRSPLGSGAGPILTAGCGGKLCASFSKNAWRFGYNI*
Ga0070707_1002560014	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VLKVSVGTALRKFCNPALCSPPGSGAGPILIAGCGGKLSATFSKNARRSGYSI*
Ga0070707_1005821871	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	REAKQACDYRLVAMLRCAVLNLSVGTALRTFRKPGLRSPLGSGAGPILTAGCGGKLCASFSKNAWRFGYNI*
Ga0070707_1009233281	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	AFMLRCAVLSISVGTAFRIFRDPGLHPPLKSGAGPILIAGCGDKLSASFSKKA*
Ga0070698_1000230764	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MLRCAVLSVSVGTALRKFRNPALCPPPGSGAGPILIVGCDDKLSANFSKNACRFGYDI*
Ga0070698_1004266643	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VAMLRCAVLSLSVGTALRIFRNPGLRSPLGSGAGPILTAGCGGKLRASFSKNAWRFGYNI
Ga0070699_1011040651	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	RLAPMLLCAALSTSVGTALRIFRDPGLRSPLGRGAVPILIAGCGGKLCASFSKNAWRFGYNI*
Ga0070697_1012090371	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	AVLKVSVGTALRKFRNPALRSPPGRGAGPILIAGCGGKPSATFSKNAWRSGYSI*
Ga0070697_1019549571	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VGTALRIFRDPGLRSPLRRGTGPILIAGRGGKLRASFSKNACRFGYNI*
Ga0070695_1016479142	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MLRCAVLKVSVGTALRKFRNPPLRSPPGSGAGPILIAGCGGKLSATFS
Ga0066661_104051952	3300005554	Soil	MLLCAVLNVFVTASRIFRDPALRSPLGRGAGPIFNAGCGGKLSASFSKNAWRF
Ga0066704_101427963	3300005557	Soil	MQTALTSMKAGLGSILRCAVHNVSVGTAFRIFRDPSLRSPLGSGAGPILIAGCAGKFSASFSKNACRFGYAI*
Ga0066700_106564231	3300005559	Soil	MLRWAEHNVCVGTAFRMFRDPALRTPLGKGAGPILIAGCEGKLSASFSKN
Ga0066708_108659011	3300005576	Soil	MPRCAVLKVSVGTALRKFRNPALCSPPGSGAGPILIAGCGGKLSATFSKNAWRSGYSI*
Ga0066903_1000045533	3300005764	Tropical Forest Soil	MILAFMLRCAVLSISVGTAFRILRDPSLRSPLESGTRPILIAGCGDNLSASFSKKA*
Ga0070717_102974221	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MLRCAVLSLSVGTALRIFRNPGLRCPLGSGADPILTAGCGGKLCASFSKNAWRFGYNI*
Ga0070717_112129972	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MLRCAVLKVSVGTAFRIFRDPSLRPPLGSGAGPILIAGCDGKFSASFSKNA*
Ga0070717_115002752	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VSSVRHILRCAVLSLCVGTAFRITHKPLLCSALGIGAGPILIAGRGGKLNAS
Ga0070712_1015397212	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MLRCAVLSISVGTAFRIFRDPGLHPPLKSGAGPILIAGCGDKLSASFS
Ga0066659_110464251	3300006797	Soil	LIECFGFTRMLRWAVHNVCVGTALRRWRDPGLRTPLGRGAGPILIAGCEGRQSASLSKNALRFG*
Ga0066793_101018942	3300009029	Prmafrost Soil	MLRCAVLNVSVGTAVRIFRDPSLRFPLGSGAGPILIAGCAGKFSASFSKNACRFGYAI*
Ga0099829_108655081	3300009038	Vadose Zone Soil	MLRCAVLRVSVGTALRKFDNPALCSPLGSGAGPILIAGCGGKLSASFSKNA
Ga0099829_112918482	3300009038	Vadose Zone Soil	LRWAEHNVCVGSAFRMFRDPALRTPLGKPAGPILIAGCEGKLSASFSKNAWRLGYSI*
Ga0099828_102733394	3300009089	Vadose Zone Soil	LCDPRLAFMLRCAVLSISVGTAFRIFRDPGLHPPLKSGASPILIAGCGDKLSASFSKKA*
Ga0066709_1019156982	3300009137	Grasslands Soil	MLRCALLKVSVGTALRKFRNPALRSPPGSGAGPILIAGCGGKLSASFSKNAWRSGYSI*
Ga0099796_100498364	3300010159	Vadose Zone Soil	VLNVSVGTAFRIFRDPSLRFPPGSGAGAILIAGCAGKCSASFSKNACRSGYNI*
Ga0099796_101206592	3300010159	Vadose Zone Soil	MLRWAVHNVCVGTALRRWRDPRLRTPLGRGAGPILIAGCKGKLSASFSKNAG
Ga0126372_130839693	3300010360	Tropical Forest Soil	MLRCAVLSLCAGTAFRITRNPRLCSALGIGAGPILIAGYGGKLSASFSKKAS
Ga0134128_104916471	3300010373	Terrestrial Soil	MLRLAVLSRCAGTAFRITRTPCLCSALGIGAGPILIAGRGGKLNASFSKKACRS
Ga0105239_124003271	3300010375	Corn Rhizosphere	AAEDSTEMTAFRKFRNPALCFPAGSGAGLILIAGCGGKLSASFLKNAWRSGYSI*
Ga0137392_101701031	3300011269	Vadose Zone Soil	MLRCAVLSISVGTAFRIFRDPGLHPPLKRGAGPILIAGCGDKLSASFSKKA*
Ga0137392_105048044	3300011269	Vadose Zone Soil	MLRCAVLSISVGTAFRIFRDPGLHPPLKSGADPILIAGCADKLSASFSKKA*
Ga0137392_113652651	3300011269	Vadose Zone Soil	CDYRLVAMLRCAVLSLSVGTALRIFRNPGLRCPLGSGAGPILTAGCGGKLCASFSKNACRFG*
Ga0137393_100206006	3300011271	Vadose Zone Soil	MLRCAVLSISVGTAFRIFRDPGLHPPLKSGASPILIAGCGDKLSASFSKKA*
Ga0137388_119781872	3300012189	Vadose Zone Soil	MLRCAVLKVSVGTAFRKFRNPALCSPPGSGAGPILIAGCGGKLSAIFSKN
Ga0137364_104826533	3300012198	Vadose Zone Soil	LCDLRLGFMLRCAVLKVSVGTALRKFRNPALRSPPGSGAGPILIAGCGGKLSATFSKNVRRSGYSI*
Ga0137363_101089782	3300012202	Vadose Zone Soil	MLRCAEHNVCVGTAFRIFRDPALRTPLGKGAAPILIAGREGKLSASFSKNARRFGYST*
Ga0137363_101551143	3300012202	Vadose Zone Soil	NEMLRLFAMLRCAVVRLSAGTALRIFSNPGLRFPLGRGAGPILIAGCGGKLSASFSKNACLLGYII*
Ga0137363_112729622	3300012202	Vadose Zone Soil	MLRCTVLSLCASTAFRTIRNPCLRYPLGIGAGPIFIASCGGKLSASFS
Ga0137363_115258761	3300012202	Vadose Zone Soil	MLRWAEHNVCAGTAFRMFRDPALRTPLGNGAGLILIAGCEGKLSASFLKNAWRLGYSI*
Ga0137362_100546972	3300012205	Vadose Zone Soil	MLRWAEHNVCVGTAFRMFRDPALRTPLGKGAGPILIAGCEGKLSASFSKNAWRLGYSI*
Ga0137381_115073742	3300012207	Vadose Zone Soil	MLRCALLKVSVGTALRKFRNPALRSPPGSGAGPILIAGCGGKLSASFSKNA
Ga0137379_103418212	3300012209	Vadose Zone Soil	MLRCAVLSISVGTAFRIFRDPGLRPPLKSGADPILIAGCGDKLSASFSKKA*
Ga0137371_100807422	3300012356	Vadose Zone Soil	MPRCATLKVSVGTAPRKFRNPALFSPPGSGAGPILIAGCGGKLSASFSKNAWRSGYSI*
Ga0137385_105149103	3300012359	Vadose Zone Soil	RCAVLKVSVGTALRKFRNPALCSPPGSGAGPILIAGCGGKLSASFSKNAWRSGYSI*
Ga0137361_100679701	3300012362	Vadose Zone Soil	MLRCAVLKVSVGTAPRKFRNPALCSPPGSGAGPILIAGCGGKLSASFLKNA
Ga0137361_109573462	3300012362	Vadose Zone Soil	FTRMLRWAEHNVCVGTAFRMFRDPALRTPLGKGAGPILIAGCESKLSASFSKNAWRLGYSI*
Ga0137358_108924351	3300012582	Vadose Zone Soil	GSAGCGFIECFGFTRMLRCAEHNVCVGTAFRIFRDPALRTPLGKGAAPILIAGREGKLSASFSKNARRFGYST*
Ga0137398_103453393	3300012683	Vadose Zone Soil	MLRCAVLKVSVGTALRKFRNPALCFPAWSGAGPILIAGCGGKLSASFLKNAWRS
Ga0137398_108541811	3300012683	Vadose Zone Soil	SVGTAFRIFRDPGLHPPLKSGAGPILIAGCGDKLSASFSKKA*
Ga0157299_103303272	3300012899	Soil	MLRCAALKVSVSTAFRKFRDPALCFPAGSGAGPTLIAGCGGKLSASFLKNAWRSGYSI*
Ga0157286_104604102	3300012908	Soil	MLRCALLKVSVGTAFRKFRNPALRSPPGSGAGPILIAGCGGKLSASFLKNAWRSGYSI*
Ga0137396_100609994	3300012918	Vadose Zone Soil	AEHNVCAGTAFRMFRDPALRTPLGNGAGLILIAGCEGKLSASFLKNAWRLGYSI*
Ga0137396_107930931	3300012918	Vadose Zone Soil	AEHNVCAGTAFRMFRDPALRTPLGNGAGLILIAGCEGKLSDSFSKNAWRFGYSI*
Ga0137359_100514704	3300012923	Vadose Zone Soil	MLRWAEHNVCVGTAFRIFRDPALRTPLGKGAAPILIAGCEGKLSASFSKNAWRLGYSI*
Ga0137359_101261652	3300012923	Vadose Zone Soil	MPRCAVLKVSVGTALRKFRNPALRSPPGSGAGPILIAGCGGKLSASFSKNAWRSGYSI*
Ga0137359_105026413	3300012923	Vadose Zone Soil	SMLRCAVLNVSVCTAFRIFRDPSLGFPLGSGAGPILIADCAGKFSASFSKNAWRSRYDI*
Ga0137359_116882981	3300012923	Vadose Zone Soil	MLRCAMLKVSVGTAFRKFRNPALRSPLGSGAGPILIAGCGAKLSATFSKNAWRSGYSI*
Ga0137416_106392661	3300012927	Vadose Zone Soil	TRMLRWAVHNVCVGTALRRWRDPGLRTPLGRGAGPILIAGCEGRQSASLSKNAWRFG*
Ga0137410_110786272	3300012944	Vadose Zone Soil	RCALLKVSVGTALRKFRNPALRSPPGSGAGPILIAGCGGKLSASFSKNAWRSGYSI*
Ga0120132_10721522	3300013832	Permafrost	ARVPPILLCAVLKVSVDTAFRIFRDPSRGCPLGSGASPILIAGCNGKLNASLAKKAWRLGYDI*
Ga0173483_101079603	3300015077	Soil	MLRCAALKVSVSTAFRKFRDPGLCSPLGSGAGPILIAGCGGKLSASFLKNAWRSGYSI*
Ga0137418_100332457	3300015241	Vadose Zone Soil	MAGISAYPDRQRPLLIECFCSTRMLRWAVHNVCVGTALRRWRDPGLRTPLGRGAGPILIAGCEGRQSASLSKNAWRFG*
Ga0137412_110782042	3300015242	Vadose Zone Soil	MTGCGLIEGFGFTRMLRWAEHNVCVGTALRRWRDPGLRTPLGRGAGPILIAGCEGRLSASFSKNARRFGYSI*
Ga0137409_107214041	3300015245	Vadose Zone Soil	MLRWAEHNVCAGTAFRMFRDPALRTPLGNGAGLILIAGCEGKLSASFLKNAWRFGYSI*
Ga0137403_103069283	3300015264	Vadose Zone Soil	MLRWAEHNVCAGTAFRMFRDPAPRTPLGNGAGLILIAGCEGKLSASFL
Ga0137403_103615632	3300015264	Vadose Zone Soil	MLRWAEHNVCAGTAFRMFRDPALRTPLGNGAGLILIAGCEGKLSASFL
Ga0182035_107692881	3300016341	Soil	MLRWAVLSLCAGTALRIVLNPCLCSALGIGAGPILIAGCGGKLNAS
Ga0066667_110899182	3300018433	Grasslands Soil	MLRCALLKVSVGTALRKFRNPALRSPPGSGAGPILIAGCGGKLSASFSKNAWRSGYSI
Ga0066662_103595411	3300018468	Grasslands Soil	MLRCAVLSISVGTAFRIFRDPGLRPPLKSGAGPILIAGCGDKLSASFSKKA
Ga0173481_104728471	3300019356	Soil	MLRCAVLSLCAGTAFRITRNPCLCSALGIGAGPILIAGPGAKLNASFS
Ga0193729_10155164	3300019887	Soil	MLRCAVLNVSVGTAFRIFRDPSLRFPLGSGAGPILIAGCAGKCNASFSKNACRFGYAI
Ga0193729_10847572	3300019887	Soil	MLRWAEHNVCVGTAFRMFRDPAPRTPLGKGAGLILIAGREGKLSASFSKNAWRLGYSI
Ga0193728_10081178	3300019890	Soil	MLRCAVLNVSVGTTFRIFRDSSLRFPLGSGAGPILIAGCAGRCSASFSKNA
Ga0193735_10008461	3300020006	Soil	MLRCAVLNVSVGTAFRIFRDPSLRFPLGSGAGPILIAGCAGKCNASFSKNACRFG
Ga0193733_10032254	3300020022	Soil	MLRCAVLNVSVGTAFRIFRDPSLRFPLGSGAGPILIAGCAGKCNASFSKNACRFGYSI
Ga0179594_103220122	3300020170	Vadose Zone Soil	MLRCAEHNVGVGTALRRWRDPGLASPRGRNTGPILIAGCKGKLSASFSKNARRFG
Ga0179592_104004652	3300020199	Vadose Zone Soil	MLRWAEHNVCAGTAFRMFRDPALRTPLGNGAGLILIAGCEGKLSASFLKNAWRLGYSI
Ga0210407_100652333	3300020579	Soil	MFRCAVLNVSVGTAFRIFLDPSLCPPLGSGAGPILIAGCAGKFSASLSKNARRFGYAI
Ga0215015_106252101	3300021046	Soil	MLRWAEHNVCVGTALRMFRDPALRIPLGKGAGLILIAGCEGKLSASFSKNAWRLGYSI
Ga0210406_100846923	3300021168	Soil	MLRCAVLNVSVGTAFRIFRDPSLRPPLGSGAGPILIAGCAGKFSASFSKNACRFGYAIWPIVVCILVLRLV
Ga0210405_100511341	3300021171	Soil	MLRCAVLNVSVGTACRIFRDPSLRFPLGSGAGPILIAGCAGRCSASFSKNACRFGYAI
Ga0193719_100494001	3300021344	Soil	MLRCAVLKVSVGTAPRKFRNPALCSPPGSGAGPILIAGCGGKLSASFSKNAWRSG
Ga0193709_10341612	3300021411	Soil	EHNVCVGTAFGMFRDPAPRTPLGKGAGLTLIAGREGKLSASFSKNAWRLGYSI
Ga0193750_100024910	3300021413	Soil	MLRWAEHNVCVGTAFRMFRDPAPRTPLGKGAGLTLIAGREGKLSASFSKNAWRLGYSI
Ga0193695_100007618	3300021418	Soil	MLRWAEHNVCVGTAFRMFRDPALRTPLGKGAGPILIAGCEGKLSASFSKNAWRLGYSI
Ga0210402_105297343	3300021478	Soil	GSALEYGTSPVWVNPRETKQACNHRPVAMLRWAVLSLSVGTALRMLRNPGRRLPLGSGAGPILNAGCGGKLWASLSKNARRFGYNI
Ga0212123_102517572	3300022557	Iron-Sulfur Acid Spring	MLRCAEHNVCVGTAFRIFRDPTLLIPLGKGAGPILIAGCNGKLSAS
Ga0137417_10718593	3300024330	Vadose Zone Soil	MLRWAEHNVCAGTAFRMFRDPALRTPLGNGAGLILIAGCEGKLSASFLKNAWR
Ga0207653_100908592	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MLRCAVLSISVGTAFRIFRDPGLHPPLKSGADPILIAGCGDKLSASFSKKA
Ga0207684_109818772	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MLRCAVLSISVGTAFRIFRDPGLRPPLRSGAGPILIAGCGDKLSASFSKKA
Ga0207693_100590354	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MLRCAVLKVSVGTALRKFCNPALRSPPGSGAGPILIAGCGGKLSATFSKN
Ga0207693_109045362	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MLRCAVLSISVGTAFRIFRDPGLHPPLKSGAGPILIAGCGDKLSASFSKKA
Ga0207703_118337032	3300026035	Switchgrass Rhizosphere	EITAFRKFRNPALCFPAGSGAGLILIAGCGGKLSASFLKNAWRSGYSI
Ga0209152_103715802	3300026325	Soil	GFMLRCAVLKVSVGTALRKFHNPALCSPPGNGAGPILIAGYGGKLSASFSKNAWRSGYSI
Ga0209803_10967121	3300026332	Soil	MLRCAVLSRCAGTAFRTIRNPCLCSPLGIGAGPILIAGCGGKLSASFLKKACRSGYNVVI
Ga0257173_10352242	3300026360	Soil	MLRWAEHNVCAGTAFRMFRDPALRPPLGNGAGLILIAGCEGKLSASFLKNAWRLGYSI
Ga0257165_11101051	3300026507	Soil	GDYRLVAMLRCAVLSLSVGTALRIFRNPGLRSPLGSGAGPILTAGCGGKLCASFSKNAWRFGYNI
Ga0209806_11783781	3300026529	Soil	MLRCAMLKLSVGTAFRKFRNPALRSPPGSGAGPILIAGCGGKLSASFSKNAWRSGYSI
Ga0179593_10201162	3300026555	Vadose Zone Soil	MLRCALLKVSVGTALRKFRNPALRSPPGSGAGPILIAGCGGKLSASFSKNAWRSGYRI
Ga0209625_10086713	3300027635	Forest Soil	MLRCAVLNVSVGTAFRIFRDPSRSPLGSGAGPILIAGCAGKFSASFSKNAWRFGYDI
Ga0209625_11564891	3300027635	Forest Soil	MLRCAVLRLSVGTALRKFRNPGLRSPLGRGAGPILIAGCGGKLSASFSKNA
Ga0209076_12168492	3300027643	Vadose Zone Soil	MLRWAEHNVCVGTAFRMFRDPALRTPLGNGAGLILIAGCEGKLSASFLKNAWRLGYSI
Ga0209488_101528311	3300027903	Vadose Zone Soil	CGLIEGFGFTRMLRWAEHNVCVGTALRRWRDPGLRTPLGRGAGPILIAGCEGRLSASFSKNARRFGYSI
Ga0247828_105653481	3300028587	Soil	MLRCTVLSLCAGTAFRITRNPCLCSALGMGAGPILIAGCGAKLSASFSKKACRSGYN
Ga0307312_100279774	3300028828	Soil	MLRCAILKVSVGTVFRKFRDPALRSPAGSGAGPILIAGCGGKLSASFSKNAWRSGYSI
Ga0307278_101440642	3300028878	Soil	MLRCAVLKVSVGTALRKFRNPALRSPPGSGAGPILIAGCGGKLSASFSKNAWRSGYSI
Ga0075404_110898522	3300030842	Soil	MLRCAVLSRCAGTAFHTIRNPCLCPPLGIGAGPIVIAGCGGKLSASFSKKSLPIRE
Ga0170823_109219421	3300031128	Forest Soil	MLRCAVLSISVGTAFRIFHDPGLRPPLKSGAGPILIAGCGDKLSASFSKKA
Ga0170824_1229758421	3300031231	Forest Soil	MLLRAVLKVCVGTALRVLRNPCLCSPLGIGAGPILIAGCGGKRKASFSKKACRSGYNI
Ga0170820_173410511	3300031446	Forest Soil	PMLRCAVLSRCAGTAFRITRNPCLCSPLGIGAGPILIAGCGGKLSRQLLKKSLPIWV
Ga0307473_102441232	3300031820	Hardwood Forest Soil	MLRCAVLSISVGTAFRIFRDPSLRPPLKSGAGPILIAGCGDKLSASFSKKA
Ga0307478_100026023	3300031823	Hardwood Forest Soil	MLRCAVLNVSVGTAFRMFRDPGLGRPLGSGAGPILIAGCKGKLNASLAKKAWRWS
Ga0307471_1003354491	3300032180	Hardwood Forest Soil	MLRYAALSLSVGTALRMLRNPGRRFPLGTGAGPILNAGSGGKLWASFSKNARRFG
Ga0307471_1023930551	3300032180	Hardwood Forest Soil	MLRCAVLSLCAGTAFRITRNPCLCSAPGIGAGPILIAGCGGKLSASFS
Ga0310810_108904511	3300033412	Soil	MLRCAALKVSIGTALRIFRDPGLCSPLGSGAGPILIAGCRGKLSASFSKNAWRSGY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F057556

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences