Metagenome / Metatranscriptome Family F057648

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F057648
Family Type	Metagenome / Metatranscriptome
Number of Sequences	136
Average Sequence Length	97 residues
Representative Sequence	VAQHILRKDLKKDEIREKLVSGVESVASHQQALWIVVTVALVVALAVFGWNSYARRQTAKASAALDDAMKIFQARIRAPGEPADPVEVTYLDEKNK
Number of Associated Samples	103
Number of Associated Scaffolds	136

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	94.12 %
% of genes near scaffold ends (potentially truncated)	97.79 %
% of genes from short scaffolds (< 2000 bps)	91.18 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (92.647 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (17.647 % of family members)
Environment Ontology (ENVO)	Unclassified (25.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (38.235 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 59.68% β-sheet: 0.00% Coil/Unstructured: 40.32%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 136 Family Scaffolds
PF00313	CSD	49.26
PF01740	STAS	7.35
PF01797	Y1_Tnp	3.68
PF13484	Fer4_16	2.21
PF13581	HATPase_c_2	2.21
PF13174	TPR_6	1.47
PF01925	TauE	0.74
PF03743	TrbI	0.74
PF02371	Transposase_20	0.74
PF13686	DrsE_2	0.74
PF12848	ABC_tran_Xtn	0.74
PF16864	Dimerisation2	0.74
PF07719	TPR_2	0.74
PF00005	ABC_tran	0.74
PF01741	MscL	0.74

COG ID	Name	Functional Category	% Frequency in 136 Family Scaffolds
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	3.68
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	0.74
COG1970	Large-conductance mechanosensitive channel	Cell wall/membrane/envelope biogenesis [M]	0.74
COG2948	Type IV secretory pathway, VirB10 component	Intracellular trafficking, secretion, and vesicular transport [U]	0.74
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.74

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	92.65 %
Unclassified	root	N/A	7.35 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	92.65 %
Unclassified	root	N/A	7.35 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	92.65 %
Unclassified	root	N/A	7.35 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	76.47 %
Unclassified	root	N/A	7.35 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.47 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	54.41 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	15.44 %
Unclassified	root	N/A	7.35 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.47 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	54.41 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	15.44 %
Unclassified	root	N/A	7.35 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.47 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	54.41 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	15.44 %
Unclassified	root	N/A	7.35 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.47 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	54.41 %
Unclassified	root	N/A	7.35 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.47 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.74 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	54.41 %
Unclassified	root	N/A	7.35 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.47 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.74 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_100423899	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1209	Open in IMG/M
3300003505\|JGIcombinedJ51221_10427862	Not Available	536	Open in IMG/M
3300005176\|Ga0066679_10197202	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1282	Open in IMG/M
3300005538\|Ga0070731_10175483	All Organisms → cellular organisms → Bacteria	1423	Open in IMG/M
3300005542\|Ga0070732_10334601	All Organisms → cellular organisms → Bacteria	911	Open in IMG/M
3300006050\|Ga0075028_100005133	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5074	Open in IMG/M
3300006050\|Ga0075028_100130405	All Organisms → cellular organisms → Bacteria	1312	Open in IMG/M
3300006050\|Ga0075028_100260446	All Organisms → cellular organisms → Bacteria	955	Open in IMG/M
3300006050\|Ga0075028_100340742	All Organisms → cellular organisms → Bacteria	845	Open in IMG/M
3300006086\|Ga0075019_10273300	All Organisms → cellular organisms → Bacteria	1013	Open in IMG/M
3300006086\|Ga0075019_10577748	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	703	Open in IMG/M
3300006086\|Ga0075019_10732587	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	627	Open in IMG/M
3300006102\|Ga0075015_100213512	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1032	Open in IMG/M
3300006162\|Ga0075030_101583267	All Organisms → cellular organisms → Bacteria → Proteobacteria	512	Open in IMG/M
3300006172\|Ga0075018_10246456	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300006174\|Ga0075014_100020748	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2513	Open in IMG/M
3300006174\|Ga0075014_100929584	Not Available	522	Open in IMG/M
3300006354\|Ga0075021_10307303	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	984	Open in IMG/M
3300006354\|Ga0075021_10360517	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	908	Open in IMG/M
3300006354\|Ga0075021_10924714	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	567	Open in IMG/M
3300006358\|Ga0068871_100767394	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	887	Open in IMG/M
3300009038\|Ga0099829_10526655	All Organisms → cellular organisms → Bacteria → Acidobacteria	982	Open in IMG/M
3300009089\|Ga0099828_10800683	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	844	Open in IMG/M
3300009090\|Ga0099827_10286205	All Organisms → cellular organisms → Bacteria → Acidobacteria	1392	Open in IMG/M
3300009090\|Ga0099827_10505530	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1038	Open in IMG/M
3300009522\|Ga0116218_1148892	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1063	Open in IMG/M
3300009525\|Ga0116220_10315803	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	689	Open in IMG/M
3300009545\|Ga0105237_11533570	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	673	Open in IMG/M
3300010371\|Ga0134125_12008003	Not Available	629	Open in IMG/M
3300010379\|Ga0136449_100541271	Not Available	2006	Open in IMG/M
3300010379\|Ga0136449_103148244	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	639	Open in IMG/M
3300010379\|Ga0136449_104594661	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300010379\|Ga0136449_104617251	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300012004\|Ga0120134_1041094	All Organisms → cellular organisms → Bacteria	785	Open in IMG/M
3300012189\|Ga0137388_10495729	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1134	Open in IMG/M
3300012189\|Ga0137388_11494773	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	613	Open in IMG/M
3300012189\|Ga0137388_11805170	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300012203\|Ga0137399_11740226	Not Available	512	Open in IMG/M
3300012351\|Ga0137386_10060990	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2620	Open in IMG/M
3300012357\|Ga0137384_10175576	Not Available	1794	Open in IMG/M
3300012363\|Ga0137390_10645499	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1023	Open in IMG/M
3300012917\|Ga0137395_10233732	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1287	Open in IMG/M
3300012924\|Ga0137413_11274042	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	589	Open in IMG/M
3300012929\|Ga0137404_10766045	All Organisms → cellular organisms → Bacteria	876	Open in IMG/M
3300012931\|Ga0153915_11222813	All Organisms → cellular organisms → Bacteria → Proteobacteria	877	Open in IMG/M
3300012944\|Ga0137410_12060306	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300012986\|Ga0164304_11731888	Not Available	522	Open in IMG/M
3300013296\|Ga0157374_10182582	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2050	Open in IMG/M
3300014165\|Ga0181523_10519738	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300014501\|Ga0182024_11049279	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	967	Open in IMG/M
3300014654\|Ga0181525_10328535	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	836	Open in IMG/M
3300014657\|Ga0181522_10828499	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	568	Open in IMG/M
3300014839\|Ga0182027_10051781	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	5136	Open in IMG/M
3300014969\|Ga0157376_11268576	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	766	Open in IMG/M
3300015242\|Ga0137412_10980849	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	606	Open in IMG/M
3300017930\|Ga0187825_10278586	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	619	Open in IMG/M
3300017955\|Ga0187817_11134631	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300017996\|Ga0187891_1110466	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1025	Open in IMG/M
3300018007\|Ga0187805_10010871	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3830	Open in IMG/M
3300018007\|Ga0187805_10184203	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	952	Open in IMG/M
3300018034\|Ga0187863_10103062	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1599	Open in IMG/M
3300019890\|Ga0193728_1193699	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	859	Open in IMG/M
3300020170\|Ga0179594_10188171	All Organisms → cellular organisms → Bacteria	771	Open in IMG/M
3300020199\|Ga0179592_10189068	All Organisms → cellular organisms → Bacteria	935	Open in IMG/M
3300020580\|Ga0210403_10858081	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	718	Open in IMG/M
3300020580\|Ga0210403_10919792	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	689	Open in IMG/M
3300020581\|Ga0210399_10093875	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2448	Open in IMG/M
3300020581\|Ga0210399_10384207	All Organisms → cellular organisms → Bacteria	1171	Open in IMG/M
3300020581\|Ga0210399_10493564	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1018	Open in IMG/M
3300020581\|Ga0210399_10705855	All Organisms → cellular organisms → Bacteria → Acidobacteria	829	Open in IMG/M
3300020583\|Ga0210401_11168340	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300021086\|Ga0179596_10231064	All Organisms → cellular organisms → Bacteria	908	Open in IMG/M
3300021086\|Ga0179596_10429987	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	667	Open in IMG/M
3300021086\|Ga0179596_10588197	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	565	Open in IMG/M
3300021170\|Ga0210400_10278636	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1370	Open in IMG/M
3300021170\|Ga0210400_11575142	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	519	Open in IMG/M
3300021178\|Ga0210408_10693344	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	802	Open in IMG/M
3300021178\|Ga0210408_11422727	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	522	Open in IMG/M
3300021420\|Ga0210394_10798395	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	824	Open in IMG/M
3300021420\|Ga0210394_10976820	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	734	Open in IMG/M
3300021420\|Ga0210394_11319089	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	616	Open in IMG/M
3300021420\|Ga0210394_11343757	Not Available	609	Open in IMG/M
3300021432\|Ga0210384_10731773	All Organisms → cellular organisms → Bacteria	884	Open in IMG/M
3300021432\|Ga0210384_11178895	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	670	Open in IMG/M
3300021478\|Ga0210402_11547337	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	590	Open in IMG/M
3300021479\|Ga0210410_10315002	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1404	Open in IMG/M
3300021559\|Ga0210409_10009017	All Organisms → cellular organisms → Bacteria	10106	Open in IMG/M
3300022718\|Ga0242675_1073046	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	617	Open in IMG/M
3300024283\|Ga0247670_1113077	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300025725\|Ga0209638_1190346	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	627	Open in IMG/M
3300025898\|Ga0207692_10632230	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	690	Open in IMG/M
3300025928\|Ga0207700_10483527	All Organisms → cellular organisms → Bacteria → Acidobacteria	1094	Open in IMG/M
3300025941\|Ga0207711_11064341	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	749	Open in IMG/M
3300026481\|Ga0257155_1080342	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	530	Open in IMG/M
3300026557\|Ga0179587_10185978	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1310	Open in IMG/M
3300027591\|Ga0209733_1076850	All Organisms → cellular organisms → Bacteria	861	Open in IMG/M
3300027629\|Ga0209422_1032659	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1279	Open in IMG/M
3300027678\|Ga0209011_1051027	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1265	Open in IMG/M
3300027727\|Ga0209328_10116994	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	814	Open in IMG/M
3300027842\|Ga0209580_10549696	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	574	Open in IMG/M
3300027846\|Ga0209180_10492823	All Organisms → cellular organisms → Bacteria → Acidobacteria	687	Open in IMG/M
3300027867\|Ga0209167_10416927	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	733	Open in IMG/M
3300027869\|Ga0209579_10193625	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1088	Open in IMG/M
3300027884\|Ga0209275_10578971	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	643	Open in IMG/M
3300027889\|Ga0209380_10847414	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516	Open in IMG/M
3300027894\|Ga0209068_10152652	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1251	Open in IMG/M
3300027894\|Ga0209068_10436449	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	750	Open in IMG/M
3300027915\|Ga0209069_10008010	All Organisms → cellular organisms → Bacteria → Acidobacteria	5223	Open in IMG/M
3300027915\|Ga0209069_10915313	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300028047\|Ga0209526_10598138	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	707	Open in IMG/M
3300028536\|Ga0137415_10222566	All Organisms → cellular organisms → Bacteria	1701	Open in IMG/M
3300029910\|Ga0311369_11312949	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	552	Open in IMG/M
3300030058\|Ga0302179_10465588	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300030763\|Ga0265763_1011839	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	825	Open in IMG/M
3300030862\|Ga0265753_1011164	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1184	Open in IMG/M
3300031231\|Ga0170824_109973334	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	824	Open in IMG/M
3300031231\|Ga0170824_122798084	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	802	Open in IMG/M
3300031231\|Ga0170824_127285020	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	769	Open in IMG/M
3300031238\|Ga0265332_10256410	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	723	Open in IMG/M
3300031239\|Ga0265328_10467765	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300031241\|Ga0265325_10019089	All Organisms → cellular organisms → Bacteria → Acidobacteria	3794	Open in IMG/M
3300031595\|Ga0265313_10028197	All Organisms → cellular organisms → Bacteria → Acidobacteria	2923	Open in IMG/M
3300031708\|Ga0310686_102444233	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1349	Open in IMG/M
3300031715\|Ga0307476_10644040	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	786	Open in IMG/M
3300031715\|Ga0307476_10927168	Not Available	642	Open in IMG/M
3300031715\|Ga0307476_11442969	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300031720\|Ga0307469_11436573	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	659	Open in IMG/M
3300031753\|Ga0307477_10338709	All Organisms → cellular organisms → Bacteria	1035	Open in IMG/M
3300031754\|Ga0307475_11236038	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	581	Open in IMG/M
3300031820\|Ga0307473_10530851	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	800	Open in IMG/M
3300031823\|Ga0307478_11073177	Not Available	672	Open in IMG/M
3300032180\|Ga0307471_101314816	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	885	Open in IMG/M
3300032205\|Ga0307472_101103344	All Organisms → cellular organisms → Bacteria → Acidobacteria	751	Open in IMG/M
3300032783\|Ga0335079_12108896	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	540	Open in IMG/M
3300032954\|Ga0335083_10487313	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1035	Open in IMG/M
3300033513\|Ga0316628_102374711	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	701	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.38%
Host-Associated	Host-Associated	6.62%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	72.06%
Aquatic	Environmental → Aquatic	21.32%
Plants	Host-Associated → Plants	6.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	70.59%
Sediment	Environmental → Aquatic → Sediment	13.97%
Freshwater	Environmental → Aquatic → Freshwater	7.35%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.88%
Peat	Environmental → Terrestrial → Peat	1.47%
Roots	Host-Associated → Plants → Roots	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	58.82%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	13.97%
Loam	Environmental → Terrestrial → Soil → Loam	8.09%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	7.35%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.94%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.94%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.47%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.15%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	26.47%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	13.97%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.62%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.68%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.94%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.21%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.47%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.47%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.47%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.47%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.74%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.74%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.74%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	17.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.91%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	13.97%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	7.35%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.15%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.68%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.68%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	2.94%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.21%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.21%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.21%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.47%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.47%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.47%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.47%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.47%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.74%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.74%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.74%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.74%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.74%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.74%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300012004	Permafrost microbial communities from Nunavut, Canada - A30_5cm_6M	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017996	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_40	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022718	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024283	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK11	Environmental	Open in IMG/M
3300025725	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-211 (SPAdes)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026481	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-19-A	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027591	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027629	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3 (SPAdes)	Environmental	Open in IMG/M
3300027678	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030058	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1	Environmental	Open in IMG/M
3300030763	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030862	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031238	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG	Host-Associated	Open in IMG/M
3300031239	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG	Host-Associated	Open in IMG/M
3300031241	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG	Host-Associated	Open in IMG/M
3300031595	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG	Host-Associated	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1004238991	3300002245	Forest Soil	VAQHILRKDLKKDEIRDTFVHGVESVASHQQVMWIVVGAALVVALAVFGWSTYSRRQTTKAGAALDDAMKIFQARIRAPGEAAEASEIAYVDEKNKYSDAEKKFLE
JGIcombinedJ51221_104278621	3300003505	Forest Soil	VAQHILRKDLKKDEIREKFVHGVESVASHQQAFWLVIVAVLVVGLAVFGWNSYARRQTEKASAAFDDGIKIFQARVRAPGDAIDPAEVSYLDEKNKYADASKKFLEV
Ga0066679_101972023	3300005176	Soil	VAQHILRKDLKKDEIRERFVHGVESVASHQQTMWVVVGAALVVALAVFGWSTYSKRQTTKAGAALDDAMKTFQARIRAPGEAAQPGEDTYLDEKNKYT
Ga0070731_101754831	3300005538	Surface Soil	VAQHILRKDLKKDEIRETFVRGAESVASHQQLLWIVIGAAIVVALAVFGWNSYTQRQTAKASAALDDAMQVFQARIRAPGEPAEPGELTYVDEKNKAA
Ga0070732_103346011	3300005542	Surface Soil	VAQHILRKDLKKDEIREKFVHGVESVASHQQALWIVVTAALVVALAVFGWNSYARRQTAKASAALDDAMKI
Ga0075028_1000051331	3300006050	Watersheds	VAQHILRRDLKKDEIRETLVSGVESVASHQQALWIVVGAALIVALAVFGWNSYSRRQTAKASAALDDGLKIFQARIRAPGEPADPIDLTYLD
Ga0075028_1001304053	3300006050	Watersheds	VAQHILRKDLKKDEIREKIVSGVESVASHQQALWIVVTAALVVALAVFGWNSYARRQTAKASAALDDAMKIFQARIRAPGEPADPVDVTYLDEKNKFTDA
Ga0075028_1002604463	3300006050	Watersheds	MIEGNLWYDCTLENNWRNKSVAQHILRKDLKKDEIRDTLVHGVESVASHQQMLWVVIAAALVVALGVFGWSSYTKRQTAKAASSLGGAMKVFQARIHVLGEQTEPGEITYSDEKNKFADADKKFLEVAAQYGNTKPGQVARYYAALSEVQLKQY
Ga0075028_1003407422	3300006050	Watersheds	VAQHILRRDLKKDEIRERLVSGVESVATHQQALWIVIAAALVVALAVFGWNSYARRQTAKASAALDDGLKIFQARIRAPGEPADPVDPTYLDVKNK
Ga0075019_102733001	3300006086	Watersheds	VAQHILRKDLKKDEIREKFVQGVESVASHQQALWIVVTAALVVALAVFGWNSYARRQTAKASAALDDAMKIFQARIRAPGEPADPVDVTYLDEKNKFTDAN
Ga0075019_105777481	3300006086	Watersheds	VAQHILRKDLKKDEIRETLVSGVESVASHQQAMWMVLTVLLVVALAAFGWNTYARRQTAKASMALDDGLKIFQARIRTAGEPVDPTEVTYLDEKNKYTDADKKFLAVAGQYG
Ga0075019_107325871	3300006086	Watersheds	VAQHILRKDLKKDEIREKFVHGVESVASHQQALWIVVTAALVVALAVFGWNTYARRQTAKASAALDDAMKIFQARIRAAGEPADPVEITYLDEKNKFADADKKFLAVAGQYGRTKPGQMARYY
Ga0075015_1002135122	3300006102	Watersheds	VAQHILRKDLKKDEIREKFVHGVESVASHQQLLWIVVTAALVVALGVFGWSSYTRRQTAKASGALDDAMKIFQARIRAPGEPSE
Ga0075030_1015832672	3300006162	Watersheds	VAQHILRRDLKKDEIRERLVSGVESVASHQQALWLVVTLALVVALAVFGWNTYARRQTAKASAALDDAMKIFQARIRAAGEPAD
Ga0075018_102464562	3300006172	Watersheds	VAQHILRKDLKKDEIREKFVHGVESVASHQQALWIVVTAALVVALAVFGWNTYARRQTAKASVALDDGLKIFQARIRVPGDAVDPTEITYLDEKNKYTDADKKFLVVAGQYGRTKPGQMA
Ga0075014_1000207485	3300006174	Watersheds	VAQHILRKDLKKDEIRETLVSGVESVASHQQAMWMVLTVLLMVALAAFGWNTYARRQTAKASMALDDGLKIFQARIRTAGEPVDPTEVTYLDEKNKY
Ga0075014_1009295841	3300006174	Watersheds	VAQHISRKDLKTDQIRESLVHGVESVASHQQMLWVGIAAALVVALGVFGWSTYTKRQTAKAEAALNDAMKVFQSRIVATGEQTEPGEITYRDEKNKYGDAEKKFQTVAGSYG
Ga0075021_103073031	3300006354	Watersheds	VAQHILRKDLKKDQIRESFVHGVESVASHQQLMWVLVGAALIVALAVFGWSSYSRRQTAKASAALDDAMKIFQARIRATAEPAEPGEITYVDEKNKFTDAEKKFLEVANQYVRTQPGQLARY
Ga0075021_103605171	3300006354	Watersheds	VAQHILRKDLKKDEIREKLVSGVESVASHQQALWLVITAALIVALAVFGWNTYARRQTAKASAALDDAMKIFQARIRAPGE
Ga0075021_109247141	3300006354	Watersheds	VAQHILRKDLKKDEIREKLVSGVESVASHQQALWIVVTAALVVGLAVFGWTSYSRRQTAKASAALDDGMKVFQARIRAAG
Ga0068871_1007673942	3300006358	Miscanthus Rhizosphere	VAQHILRRDLKKDEFRETLVSGVESVASHQQALWIVVTAALVVALAVFGWNSYTRRQTAKASLALDDAMKIFQARIRAPGEPADPVDPTYLDEKNKFTDADKKFLAV
Ga0099829_105266552	3300009038	Vadose Zone Soil	VAQHILRKDLKKDEIREKFVLGVETVASHQQLLWVVCGAALLVAIAFFGWGSYSRRQTAKAAAALADGMKIFQARIR
Ga0099828_108006831	3300009089	Vadose Zone Soil	VAQHILRKDLKKDEIREKFVHGVESVASHQQTLWLVVVAALVVALAVFGWSTYSRRQTTKAGAALDDAMKIFQARIRAAGEPAQPGEDTYLDEKNKYTDAEK
Ga0099827_102862053	3300009090	Vadose Zone Soil	VAQHILRKDLKKDEIREKFVLGVETVASHQQLLWVVGGAALLVAIAFFGWGSYSRRQTAKAAAALADGMKIF
Ga0099827_105055301	3300009090	Vadose Zone Soil	VAQHILRKDLKKDEIREKFVHGVESVASHQQTLWLVVVAALVVALAVFGWSTYSRRQTTKAGAALDDAMKIFQARIRAA
Ga0116218_11488921	3300009522	Peatlands Soil	VAQHILRKDLKKDEIREKLVSGVESVASHQQALWLVVTAALVVALAVFGWNTYARRQTAKASAALDDAMKIFQARIRAAGEPADPVEITYLD
Ga0116220_103158031	3300009525	Peatlands Soil	VAQHILRRDLKKDEIREKIVSGVESVASHQQALWIVVAAALAVALAVFGWNSYARRQTAKASASLDDAMKIFQARIRVAGEPLDPTEITYLDEKNKFTDAD
Ga0105237_115335701	3300009545	Corn Rhizosphere	VEDESVAQHILRRDLKKDEFRETLVSGVESVASHQQALWIVVTAALVVALAVFGWNSYTRRQTAKASLALDDAMKIFQARIRAPGEPADPVDP
Ga0134125_120080032	3300010371	Terrestrial Soil	VAQHISRKDLKKDEIRETLVHGVESIASHQQLMWAVIGVAIVVAVAVFGWSSYTQRQTAKASAQLDDAMKTFQAQVLVPGETPAPDELTYSDEKNKFSDAEK
Ga0136449_1005412714	3300010379	Peatlands Soil	VAQHILRKELKTDEIREKFVHGVESVVSHQQLLWIVVGAALVVALAAFGWNSYTRRQTAKAAAALDDAMKVFQARIRAPSEAAEPGEIAYVDEKNKYHDAE
Ga0136449_1031482442	3300010379	Peatlands Soil	VAQHILRKDLKKDEIREKFVHGVESVASHQQLLWIVLGAAAVVAIAVFGWSSYSRRQTAKAGAALDDAMKTFQARVRAPGDAVDAGELTYVDETNKHKDAERKFLAVANQYGRTRPG
Ga0136449_1045946611	3300010379	Peatlands Soil	VAQHILRKDLKKDEFRDTFVHGVESVASHQQLLWIVVTAALVVALAVFGWNSYSRRQTAKAAASLDDAMKIFQARIRTPGEQVEPGEIT*
Ga0136449_1046172511	3300010379	Peatlands Soil	VEWILWYDKKFENLWREDSVAQHILRKDLKKDEIREKLVSGFESVASHQQALWLVVTAALVVALAVFGWNTYARRQTAKASAALDDAMKIFQARIRAAGEPADPVEIT
Ga0120134_10410941	3300012004	Permafrost	LRRDLKKDEIRERIVSGVESVASHQQALWLVVTAALVVALAVFGWNSYSRRQTAKASAALDDALKIFQARIRATGDTVDP
Ga0137388_104957291	3300012189	Vadose Zone Soil	VAQHILRKDLKKDEIREKFVLGVETVASHQQLLWVVCGAALLVAIAFFGWGSYSRRQTAKAAAALADGMKIFQARIRPVGEPEQPGEISYVDEKNKYA
Ga0137388_114947731	3300012189	Vadose Zone Soil	VAQHILRKDLKKDEIRERLVSGVESVASHQQALWLVVTAALVVALAVFGWNSYARRQTAKASAALDDALKIFQARIRAPGDPIDPVDITYLDGKNNLTDANKKFLVVAGEYGRTKPAQMPRRYAALADGQ
Ga0137388_118051701	3300012189	Vadose Zone Soil	VAQHILRKDLKKDEIREKFVHGVESVASHQQTLWLVVVAALVVALAVFGWSTYSRRQTTKAGAALDDAMKIF
Ga0137399_117402261	3300012203	Vadose Zone Soil	LRKDLKKDEIRERFVHGVESVASHQQTMWVVVGAALVVALAVFGWSTYSKRQTTKAGAALDDAMKTFQARIRAPGEAAQPGEDTYLDEKNKYTDAE
Ga0137386_100609901	3300012351	Vadose Zone Soil	VAQHILRKDLKKDEIREKFVHGVESVASHQQTLWLVVVAALVVALAVFGWSTYSRRQTTKAGAALDDAMKIFQARIRAAGESAQPGEDTY
Ga0137384_101755762	3300012357	Vadose Zone Soil	VAQHILRKDLKKDEIREKFVHGVESVASHQQMLWVVVTAALVVALGVFGWSGYTKRQTGKAASALDDAMKIFQARVRAAGE
Ga0137390_106454991	3300012363	Vadose Zone Soil	VAQHILRKDLKKDEIRERLVSGVESVASHQQALWLVVTAALVVALAVFGWNSYARRQTAKASAALDDGLKIFQSRIRAPGEPADPV
Ga0137395_102337323	3300012917	Vadose Zone Soil	VAQHILRKDLKKDEIREKLVSGVESVASHQQALWLVVMAALVVALAVFGWNSYAKRQTAKGSLALDDALKVFQARIRTPGDQQVDPAELTYLDEKNKYTDANKKFLQ
Ga0137413_112740421	3300012924	Vadose Zone Soil	VAQHILRKDLKKDEIRDTLVHGVESVASHQQILWVVVTAALAVALGVFGWSSYTKRQTAKAASALDGAMKVFQARIHVPGEQTEPGEITYTEEKNKFTDAEKK
Ga0137404_107660451	3300012929	Vadose Zone Soil	VAQHILRKDLKKDEIRERFVHGVESVASHQQAMWVVVGAALVVALAVFGWSTYSKRQTTKAGAALDDAMKTFQARIRAPGESAQAGED
Ga0153915_112228132	3300012931	Freshwater Wetlands	VAQHILRKDLKKDEIREKFVQGVESVVSHQQLLWIVVGAVLVVALAAFGWSSYTRRQTAKAAATLDDAMKIFQAR
Ga0137410_120603061	3300012944	Vadose Zone Soil	VAQHILRKDLKKDEIREKLVSGVESVASHQQALWLVVMAALVVALAVFGWNSYAKRQTAKGSLALDDALKVFQARIRAPGDQQ
Ga0164304_117318881	3300012986	Soil	VEDESVAQHILRRDLKKDEFRETLVSGVESVASHQQALWIVVTAALVVALAVFGWNSYTRRQTAKASLALDDAMKIFQARIRA
Ga0157374_101825823	3300013296	Miscanthus Rhizosphere	VEDESVAQHILRRDLKKDEFRETLVSGVESVASHQQALWIVVTAALVVALAVFGWNSYTRRQTAKASLALDDAMKIFQARIRAPGEPADPVDPTYLDEKNKFTDADKKFLAVAAQYGRTK
Ga0181523_105197382	3300014165	Bog	VAQHILRKDLKKDEIREKLVSGVESVASHQQALWLVIAAVLVVALAVFGWNTYARRQTAKASASLDDAMKVFQ
Ga0182024_110492791	3300014501	Permafrost	VARHILRKDLKKDEIRDTFVHGVESVASHQNVLWAVVSVAIIVALAIFGWSSYTRRETAKASAALDDAMKIFAARIRAPGEAAEP
Ga0181525_103285352	3300014654	Bog	VAQHILRKDLKKDEIRDTFVHGVESVASHQGLLYIVLGAALVIGLSILGWSSYSQRQNAKAGAALDDAMAVFNARVRAPGEPADPGEITYVDDKNKFADAEKKFLGVASQYSHTRPG
Ga0181522_108284991	3300014657	Bog	VAQHILRKDLKKDEIRETFVHGVESVASHQQLLWVVLGVALVVALSVFGWSSYSNRQTAKANAALDDAMKVFEARVRAAGEPTEP
Ga0182027_100517811	3300014839	Fen	VAQHILRKDLKKDEIREKFVHGVESVASHQQLLWIVVGAALVAVLAVFGWSSYTRRQTAIAAAALDDAMKVFQARIRAPGETAEPGEI
Ga0157376_112685761	3300014969	Miscanthus Rhizosphere	VEDESVAQHILRRDLKKDEFRETLVSGVESVASHQQALWIVVTAALVVALAVFGWNSYTRRQTAKASLALDDAMKIFQARIRAP
Ga0137412_109808491	3300015242	Vadose Zone Soil	VAQHILRKDLKKDEIRDTLVHGVESVASHQQILWVVVTAALAVALGVFGWSSYTKRQTAKAASALDGAMKVFQARIHVPGEQTEPGEITYTEEKNKFTDAEKKFLAVA
Ga0187825_102785861	3300017930	Freshwater Sediment	VAQHILRKDLKKDEIREKLVSGFESVASHQQALWIVVTAALVVALAVFGWNSYARRQTAKASAALDDAMKVFQARIRAAGEPADPVEVTYLDEKNKFTDASKKFLAVADQY
Ga0187817_111346311	3300017955	Freshwater Sediment	VAQHILRKDLKKDEIREKLVSGVESVASHQQALWIVVTVALVVALAVFGWNSYARRQTAKASAALDDAMKIFQARIRAPGEPADPVEVTYLDEKNKFTDAEKKFL
Ga0187891_11104662	3300017996	Peatland	VAQHILRKDLKKDEIREKFVHGVESVVSHQQSLWIVAGAALVVALAAFGWSSYTRRQTAIAAEALDDAMRVFQARIRAPGETAEPGEIAYVDEKNKYGDAERK
Ga0187805_100108717	3300018007	Freshwater Sediment	VAQHILRKDLKKDEIREKLVSGVESVASHQQALWIVVTAALVVALAVFGWNSYARRQTAKASAALDDAMKVFQARIRAAGEPADPVEITYLDEKNKFTDANKKFLAVAGQYGRTKPGQMARYYA
Ga0187805_101842031	3300018007	Freshwater Sediment	VAQHILRKDLKKDEIREKLVSGVESVASHQQALWIVVTVALVVALAVFGWNSYARRQTAKASAALDDAMKIFQARIRAPGEPADPVEVTYLDEKNK
Ga0187863_101030624	3300018034	Peatland	VAQHILRKDLKKDEFRDTFVHGVESVASHQQLLWIVITAALVVALAVFGWNSYSRRQTAKAAASLDDAMKIFQARIRAPGEQA
Ga0193728_11936992	3300019890	Soil	VAQHILRKDLKKDQIRESFVHGVESVASHQQILWVVISAALVVALAVFGWSTYSRRQTTKAGAALDDAMKIFQARTRRGRLRR
Ga0179594_101881711	3300020170	Vadose Zone Soil	VAQHILRKDLKKDEIRERFVHGVESVASHQQAMWVVVGAALVVALAVFGWSTYSKRQTTKAGAALDDAMKTFQARIRAPGEAAQPGEDTYLDE
Ga0179592_101890681	3300020199	Vadose Zone Soil	VAQHILRKDLKKDEIRERFVHGVESVASHQQAMWVVVGAALVVALAVFGWSTYSKRQTTKAGAALDDAMKTFQARIRAPGEA
Ga0210403_108580811	3300020580	Soil	VAQHILRKDLKKDEIREKFVHGVESVASHQQAFWLVIVAVLVVGLAVFGWNSYARRQTEKASAAFDDGIKIFQARVRAPGDAIDPAEVSYLDEKNKYADASKKFL
Ga0210403_109197921	3300020580	Soil	LAQHISRKDLKKDEIRETLVSGVESVASHQQAMWIVIAAALVIALAVFGWNTYAGRQTAKASMALDDALKIFQARIRTAGEPVDPTEVTYLDEKNKFTDADKKFLAVASQYGRTKPGQMAAYYAALSEVQL
Ga0210399_100938755	3300020581	Soil	VAQHILRKDLKKDEIREKLVSGVESVASHQQALWMVVTAALIVALAVFGWNSYARRQTAKASAALDDAMKVFQARIRVAGEQLDPAEITYLDEKNKFTDAEKKFLTVAGQYGRTK
Ga0210399_103842073	3300020581	Soil	VAQHILRKDLKKDEIREKFVHGVESVASHQQAFWLVIVAVLVVGLAVFGWNSYARRQTEKASAAFDDGIKIFQARVRAPGDAIDPAEVSYLDEKNKYADANKKFL
Ga0210399_104935641	3300020581	Soil	VAQHILRRDLKKDEIREKLVSGVESVASHQQAFWVVIAVALLVALAVFGWNSYARRQTAKASAALDDALKIFQARIRAPGEPADPVDVTYVDEKNKFSD
Ga0210399_107058551	3300020581	Soil	VAQHILRKDLKKDEIREKFVSGVESVASHQQALWIVITAALVVALAVFGWNSYARRQTAKASAALDDAMKIF
Ga0210401_111683402	3300020583	Soil	VAQHILRKDLKKDEIREKFVHGVESVASHQQGMGIVVGAVLVVALAVFGWSTYSRRQTTKAGAALDDAMKIFQ
Ga0179596_102310643	3300021086	Vadose Zone Soil	VAQHILRKDLKKDEIRERFVHGVESVASHQQAMWVVVGAALVVALAVFGWSTYSKRQTTKAGAALDDAMKTFQARIRAPGEAAQP
Ga0179596_104299871	3300021086	Vadose Zone Soil	VAQHILRKDLKKDEIRDTLVHGVESVASHQQILWVVVTAALAVALGVFGWSSYTKRQTAKAASALDGAMKVFQARIHVPGEQTEPGEITYTEEKNKFTDAEKKFLAVAAQYGRTKPGQIA
Ga0179596_105881972	3300021086	Vadose Zone Soil	VAQHILRKDLKKDEIRERLVSGVESVASHQQALWLVVTAALVVALAVFGWNSYARRQTAKASAALDDGLKIFQARIRAPGEPADPVDVTYLDEKNKFTDADKKFLLVAGQ
Ga0210400_102786361	3300021170	Soil	VAQHILRKDLKKDEIREKLVSGVESVASHQQALWIVVMAALVVALAGFGWNSFARRQTAKASAALDDGLKIFQARIRAAGEPPDPVEVTYLDEKNKFTDADKKFLAVANQYG
Ga0210400_115751421	3300021170	Soil	VAQHILRKDLKKDEIREKFVSGVESVASHQQALWLVIAAALVVALAVFGWNSYAGRQTAKASAALDDAMKIFQARIRVAGEPVDPAEITY
Ga0210408_106933441	3300021178	Soil	VAQHILRKDLKKDEIRERFFSGVESVASHQQALWLVVTAALVVALAVFGWNSYARRQTAKASGALDDALKIFQARIRAAGEPADPVDVTYLDEKNKFTDADKKFLAVAGQYGRTKPGQMALYYA
Ga0210408_114227271	3300021178	Soil	VAQHILRKDLKKDEIRESFVHGVESVASHQQFLWIVLSAALVVALAVFGWNGYTQRQTAKAAAALNDAMKVFQARIRAPGEPAE
Ga0210394_107983952	3300021420	Soil	VAQHILRKDLKKDEIREKFVHGVESVASHQQGMGIVVGAVLVVALAVFGWSTYSRRQTTKAGAALDDAMKIFQARIRTPGEPIDPSEITYLDDKN
Ga0210394_109768201	3300021420	Soil	VAQHILRKDLKKDEIRESFVHGVESVASHQQMLWIVVSAALVVALAVFGWNSYTQRQTAKAAAALDDAMKIFQARIRAAGEPAEPGELTYIDEK
Ga0210394_113190891	3300021420	Soil	VAQHILRKDLKKDEIRDKIVSGVESVASHQQALWLVVTAALVVALAVFGWNSYAKRQTAKASAALDDGLKIFQARIRAAGDPVDPVEVTYLDEKNKFTDADKKFLA
Ga0210394_113437572	3300021420	Soil	VAQHILRRDLKKDEIREKLVSGVESVASHQQALWIAIAAALVVALAVFGWNSYARRQTAKAAAALDDGLKVFQARIRAATEPADPAEVTYLDKKNKFTDADKKFLAVAIQYG
Ga0210384_107317731	3300021432	Soil	VAQHILRKDLKKDEIREKFVHGVESVASHQQAFWLVIVAVLVVGLAVFGWNSYARRQTEKASAAFDDGIKI
Ga0210384_111788951	3300021432	Soil	VAQHILRRDLKKDEIREKLVSGVESVASHQQAFWVVIAVALLVALAVFGWNSYARRQTAKASAALDDALKIFQARIRAPGEPADPVDVT
Ga0210402_115473371	3300021478	Soil	VAQHILRKDLKKDEIREKFVHGVESVASHQQALWIVVTAALVVALAVFGWNSYARRQTAKASVALDDALKVFQARIRTAGEP
Ga0210410_103150021	3300021479	Soil	VAQHILRKDLKKDEIREKFVHGVESVASHQQALWIVVTAALVVALAVFGWNSYARRQTAKASVALDDALKIFQARIRTAGEPIDPVDVSYLDEKNKFTDAD
Ga0210409_100090178	3300021559	Soil	VAQHILRKDLKKDEIREKLVSGVESVASHQQALWMVVTAALIVALAVFGWNSYARRQTAKASAALDDALKIFQARIRVGGEPVDPAEITYLDEKNKFTDADKKFLAVAGQYGRTKPGEWRGTTRPSRKSN
Ga0242675_10730461	3300022718	Soil	VAQHILRRDLKKDEIRERIVSGVESVASHQQALWIVVTAALVIALAIFGWNSNARRQTAKASAALDDAMKIFQARIRVAGEQLDPAEITYLDEKNKFTDADKKFLSVASQYGRTKP
Ga0247670_11130771	3300024283	Soil	VAQHILRRDLKKDEFRETLVSGVESVASHQQALWIVVTAALVVALAVFGWNSYTRRQTAKASLALDDAMKIFQARIRAPGEPADPVDPTYLDEKNKFTDADKKFLAVAAQYGRTKPGLMA
Ga0209638_11903462	3300025725	Arctic Peat Soil	VAQHILRKDLKKDEIREKFVHGVESVASHQQMMWVVVVGALVVALAVFGWSSYTRRQTAKASAALDDAMKIFQARIRAPGEPSEPGEVTYVDDKNKFT
Ga0207692_106322302	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	VAQHILRKDLKKDQIRESFVHGVESVASHQQVLWAIVGVALVVALAVFGWGTYSRRQTTKAGAALDDAMKIFQARIHAPG
Ga0207700_104835273	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VAQHILRKDLKKDQIRESFVHGVESVASHQQVLWAIVGVALVVALAVFGWGTYSRRQTTKAGAALDDAMKIFQARIHAPGEPAEPGELAYVDEKN
Ga0207711_110643411	3300025941	Switchgrass Rhizosphere	VAQHILRRDLKKDEFRETLVSGVESVASHQQALWIVVTAALVVALAVFGWNSYTRRQTAKASLALDDAMKIFQARIRAPGEPADPVDPTYLDEKNKFTDADKKFLAVAAQSGRTKP
Ga0257155_10803422	3300026481	Soil	VAQHILRKDLKKDQIRDSFVHGVESVASHQQILWVVVGAALVVALAVFGWSTYSRRQTTKAGAALDDAMKIFQARIHIPGEPADP
Ga0179587_101859781	3300026557	Vadose Zone Soil	VAQHILRKDLKKDEIRERFVHGVESVASHQQAMWVVVGAALVVALAVFGWSTYSKRQTTKAGAALDDAMKTFQARIRAPGES
Ga0209733_10768501	3300027591	Forest Soil	VAQHILRKDLKKDEIREKLVSGVESVASHQQILWIVVSAALVVALAVFGWNSYSQRQTAKAAAALDDAMKIFQAR
Ga0209422_10326591	3300027629	Forest Soil	VAQHILRKDLKKDEIREKLVLGVESVASHQQALWIVVTAALVVALAVFGWNSYARRQTAKASASLDDALKIFQARI
Ga0209011_10510273	3300027678	Forest Soil	VAQHILRKDLKKDEIRDTFVHGVESVASHQQVMWIVVGAALVVALAVFGWSTYSRRQTTKAGAALDDAMKIFQARIR
Ga0209328_101169941	3300027727	Forest Soil	VAQHILRKDLKKDQIRESLVHGVESVASHQQMLWVIVGAALVVALAVFGWSTYSRRQTTKAGAALDDAMKIF
Ga0209580_105496961	3300027842	Surface Soil	VAQHILRKDLKKDQIRESFVHGVESVASHQQVLWAIVGVALVVALAVFGWGTYSRRQTTKAGAALDDAMKIFQARIHAPGEPAEPGELAYVDEK
Ga0209180_104928232	3300027846	Vadose Zone Soil	VAQHILRKDLKKDEIREKFVLGVETVASHQQLLWVVCGAALLVAIAFFGWGSYSRRQTAKAAAALADGMKIFQARIRPVGEAEQA
Ga0209167_104169272	3300027867	Surface Soil	VAQHILRKDLKKDEIREKFVQGVESVASHQQALWLVVVVALVVGLAVFGWNSYARRQTAKASAALDDGMKIFLARIRAPGDPLDPTEVAYLDEKNKFTDANKKFLEVANQ
Ga0209579_101936251	3300027869	Surface Soil	VAQHILRKDLKKDEIRETFVRGAESVASHQQLLWIVIGAAIVVALAVFGWNSYTQRQTAKASAALDDAMQVFQARIRAPGEPAEPGELTYVDEKNKAADA
Ga0209275_105789711	3300027884	Soil	VAQHILRKDLKKDEIRDKFVQGVESVASHQQALWLVVAAALVVTLAVFGWNTYARRQTAKASAALDDAMKVFQARVRAVGEPADPVEITYLDEKNKYTD
Ga0209380_108474141	3300027889	Soil	VAQHILRRDLKKDEIREKLVSGVESVASHQQAFWVVIAVALLVALAVFGWNSYARRQTAKASAALDDALKIFQARIRAPGEPADPVDVTYVDEKNKFSDADKKFLSVA
Ga0209068_101526523	3300027894	Watersheds	VAQHILRKDLKKDEIRERLVSGVESVASHQQALWLVVTAALVVALAVFGWNTYARRQTAKASAALDDAMKIFQARIRAAEAFAVCR
Ga0209068_104364491	3300027894	Watersheds	VAQHILRKDLKKDEIREKLVSGVESVASHQQALWLVITAALIVALAVFGWNTYARRQTAKASAALDDAMKIFQARIRAPGEPADPVDVTY
Ga0209069_100080101	3300027915	Watersheds	VAQHILRKDLKKDEFRETLVHGVESVASHQQMLWVVIAAALAVALGVFGWSSYTKRQTAKAASSLGDAMKVFQARILILGEQTVPGEITYLDEKNKYADADKKFLEVAGQYGNTKPG
Ga0209069_109153131	3300027915	Watersheds	VAQHILRKDLKKDEIREKLVSGVESVASHQQALWMVVTAALIVALAVFGWNSYARRQTAKASAALDDAMKVFQARIRVAGEQLDPAEITYLDEKNKFTDAEKKFLTVAGQY
Ga0209526_105981381	3300028047	Forest Soil	VAQHILRKDLKKDQIRESFVHGVESVATHQQAVWLFGGVALIVALAIFGWSTYSRRQTTKAGAALDDAMKIFQARIHTPGEPAEPGEIAYVDEKNKYADAEKKFLE
Ga0137415_102225663	3300028536	Vadose Zone Soil	VTQHILRKDLKKDEIRDTLVHGVESVASHQQALWIVVTAALVVALAVFGWNSYARRQTAKASVALDDALKIFQARIRTPGEPVDPVDVSYLDEKNKFTDADKKFLVVAGQYGRTKPGQMA
Ga0311369_113129491	3300029910	Palsa	VAQHILRRDLKKDEIREKFVSGVESVASHQQALWIVITAALVVALAIFGWNSYARRQTAKASAALDDATKIFQARIRTPGEPLDPTEITYLDEKNKFADADKKF
Ga0302179_104655881	3300030058	Palsa	VAQHILRRDLKKDEIREKFVSGVESVASHQQALWIVITAALVVALAIFGWNSYARRQTAKASAALDDATKIFQARIRTPGEPLDPTEITYLDEKNKFADADKKFL
Ga0265763_10118392	3300030763	Soil	VAQHILRRDLKKDEIREKIVSGVESVASHQQALWLVVTAALVVALAVFGWNTYARRQTAKASAALDDSMKIFQARIRAAGEPADPVEVTYLDE
Ga0265753_10111643	3300030862	Soil	VAQHILRRDLKKDEIREKLVSGVESVASHQQALWLVITAALVVALAVFGWNTYARRQTAKASAALDDSMKIFQARIRAAGEPAD
Ga0170824_1099733342	3300031231	Forest Soil	VAQHILRRDLKKDEFRETLVSGVESVASHQQALWIVVTAALVVALAVFGWNSYTRRQTAKASLALDDAMKIFQARIRAPGEPADP
Ga0170824_1227980841	3300031231	Forest Soil	VAQHILRKDLKKDEIREKFVHGVESVASHQQALWIVVTAALVVALAVFGWNSYARRQTAKASVALDDALKIFQARIRTAGEPVDPVDVSYLDEKNKF
Ga0170824_1272850201	3300031231	Forest Soil	VAQHILRKDLKKDEIRETLVSGVESVASHQQALWIVLAALLVVALAVFGWNTYARRQTAKASMALDDGLKIFQASIRTAGEPVDPAEVTYLDEKNKYTDANKKFLEVA
Ga0265332_102564101	3300031238	Rhizosphere	VAQHILRKDLKKDEFRDSIVHGVESVASHQQAVWLVIAAAIVVALSVFGWSTYTSRQTAKASASLDDAVKIFQARIRAPGEQAEPGEITYVDEKNKYADAEKKFLEVAGQYKRT
Ga0265328_104677651	3300031239	Rhizosphere	VAQHISRKDLKKDEIRETFVHGVESVASHQQLLWIVLGVALVVALAVFGWSSYSNRQTAKANAALDDAMKIFQARVRAAGEPTEPGE
Ga0265325_100190891	3300031241	Rhizosphere	VAQHILRKDLKKDEFRDTFVHGVESVASHQQLLWIVVTAALVVALAVFGWNSYSRRQTAKAAASLDDAMKIFQARIRTPGEQVEPGEVTYIDEKNKY
Ga0265313_100281976	3300031595	Rhizosphere	VAQHISRKDLKKDEIRETFVHGVESVASHQQLLWIVLGVALVVALAVFGWSSYSNRQTAKANAALDDAMKIFQARVRAAGEPTEPGELTYVDEKNKYTDAEKKFTEVTNLYGRTQPGQ
Ga0310686_1024442333	3300031708	Soil	VAQHILRKDLKKDEIREKFVHGVESVASHQQALWIVVTAALVVALAVFGWNSYARQQTAKASAALDDAMKIFQARIRAAGQPADPVDVTYLDEKNKFTD
Ga0307476_106440401	3300031715	Hardwood Forest Soil	VAQHISRKDLKKDEIRETFVHGVESVASHQQMLWVVVTAALVVALGVFGWSSYTKRQTAKAASALDDAMKTFQARVRAPGEPPLPGDVSYLDEKNKFTDAEKKFLGVA
Ga0307476_109271681	3300031715	Hardwood Forest Soil	VAQHILRKDLKKDEIREKFVHGVESVASHQQAFWLVIVAALVVGLAVFGWNSYARRQTEKASAAFDDGIKIFQARVRAPGDAIDPAEISYLD
Ga0307476_114429691	3300031715	Hardwood Forest Soil	VAQHILRKDLKKDEIRDKFVQGVESVASHQQALWLVVAAALVVTLAVFGWNTYARRQTAKASAALDDAMKVFQARVRAVGEPADPVEITYLDEKNKYTDAEKKFITV
Ga0307469_114365731	3300031720	Hardwood Forest Soil	VAQHILRKDLKKDQIRERFVHGVESVASHQQLMGVVIGAGLVVALAVFGWSTYSRRQTTKAGAALDDGMKIFQARIRASGEQAQPGEVTYVDEKNKFT
Ga0307477_103387091	3300031753	Hardwood Forest Soil	VAQHILRKDLKKDEIREKFVHGVESVASHQQAFWLVIVAALVVGLAVFGWNSYARRQTEKASAAFDDGIKIFQARVRAPGDAIDPAEISYLDEKNKFTDANKKFLEVANQYGRTKPG
Ga0307475_112360382	3300031754	Hardwood Forest Soil	VAQHILRKDLKKDQIRESFVHGVESVASHQQILWVVVGAALVVALAVFGWSTYSRRQTTKAGAALDDAMKIFQARIHAPGEPADPGEVAYVDEKNKYADAEK
Ga0307473_105308511	3300031820	Hardwood Forest Soil	VAQHILRKDLKKDEIRERLVSGVESVASHQQALWLVIMAALVVALAVFGWNSYAKRQTAKASLALDDALKVFQARIRVPGDQQVDPTELTYLDEKNKYTDAN
Ga0307478_110731772	3300031823	Hardwood Forest Soil	VAQHILRKDLKKDEIREKFVHGVESVASHQQAFWLVIVAALVVGLAVFGWNSYARRQTEKASAAFDDGIKIFQ
Ga0307471_1013148161	3300032180	Hardwood Forest Soil	VAQHILRKDLKKDEIREKFVSGVESVASHQQALWLVIAAALVVALAVFGWNSYAGRQTAKASAALDDAMKIFQARIRVAGEPVDPAEITYLDEKNKFTDADKKFLVV
Ga0307472_1011033441	3300032205	Hardwood Forest Soil	VAQHILRKDLKKDEIREKFVHGVETVASHQQLMWVVGGAALLVAISFFGWGSYSRRQTAKAAAALADGMKIFQARIRPAGEAEQPGEISYVEEKNKY
Ga0335079_121088961	3300032783	Soil	VAQHILRKDLKKDEIREKFVHGVESVASHQQMLWIVVTVALVVGLGVFGWSSYTRRQTAKASAALDDAMKIFQARIRAPGEPSEPGEVTYVD
Ga0335083_104873133	3300032954	Soil	FRISRRNNSVAQHILRKDLKKDEIREKFVHGVESVASHQQMLWIVVTAALVVALGVFGWSSYTRRQTAKASGALDDAMKIFQARIRAPGEPSEPAEVTYVDEKNKYADAERKFLEVAGQYGRT
Ga0316628_1023747112	3300033513	Soil	VAQHILRKDLKKDEIREKLVHGVESVASHQQMLWIVVAAALVVALGVFGWSSYTKRQTAKASASLDDAMKIFQARILAPG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F057648

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences