NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F057661

Metagenome / Metatranscriptome Family F057661

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F057661
Family Type Metagenome / Metatranscriptome
Number of Sequences 136
Average Sequence Length 43 residues
Representative Sequence PAGPGINISKILLSIYDIDYYSQKKTTFIISERQYVSFFIVIYT
Number of Associated Samples 113
Number of Associated Scaffolds 136

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 100.00 %
% of genes from short scaffolds (< 2000 bps) 90.44 %
Associated GOLD sequencing projects 108
AlphaFold2 3D model prediction Yes
3D model pTM-score0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (61.765 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(19.118 % of family members)
Environment Ontology (ENVO) Unclassified
(73.529 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(83.088 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 50.00%    β-sheet: 0.00%    Coil/Unstructured: 50.00%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.45
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 136 Family Scaffolds
PF02082Rrf2 84.56
PF01458SUFBD 12.50
PF00005ABC_tran 2.21
PF09493DUF2389 0.74

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 136 Family Scaffolds
COG0640DNA-binding transcriptional regulator, ArsR familyTranscription [K] 84.56
COG1414DNA-binding transcriptional regulator, IclR familyTranscription [K] 84.56
COG1725DNA-binding transcriptional regulator YhcF, GntR familyTranscription [K] 84.56
COG1959DNA-binding transcriptional regulator, IscR familyTranscription [K] 84.56
COG2186DNA-binding transcriptional regulator, FadR familyTranscription [K] 84.56
COG2188DNA-binding transcriptional regulator, GntR familyTranscription [K] 84.56
COG2378Predicted DNA-binding transcriptional regulator YobV, contains HTH and WYL domainsTranscription [K] 84.56
COG2524Predicted transcriptional regulator, contains C-terminal CBS domainsTranscription [K] 84.56
COG0719Fe-S cluster assembly scaffold protein SufBPosttranslational modification, protein turnover, chaperones [O] 12.50

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms61.76 %
UnclassifiedrootN/A38.24 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2166559013|NCBI_BBAY_READ_1106105105549All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter987Open in IMG/M
3300000148|SI47jul10_100mDRAFT_c1008721Not Available2120Open in IMG/M
3300000153|SI39nov09_135mDRAFT_c1008702All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter2545Open in IMG/M
3300000167|SI39nov09_120mDRAFT_c1025793All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter1471Open in IMG/M
3300000167|SI39nov09_120mDRAFT_c1033473All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter1193Open in IMG/M
3300000167|SI39nov09_120mDRAFT_c1085152Not Available554Open in IMG/M
3300000192|SI60aug11_100mDRAFT_c1008778All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter2554Open in IMG/M
3300000192|SI60aug11_100mDRAFT_c1070530Not Available523Open in IMG/M
3300000193|SI47jul10_135mDRAFT_c1010031All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter2549Open in IMG/M
3300000224|SI34jun09_10mDRAFT_1025439All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter919Open in IMG/M
3300000225|SI34jun09_120mDRAFT_1021095All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter1780Open in IMG/M
3300000237|SI34jun09_150mDRAFT_1005611All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter1888Open in IMG/M
3300000265|LP_A_09_P04_10DRAFT_1056655Not Available574Open in IMG/M
3300000324|SI48aug10_100mDRAFT_1055115Not Available598Open in IMG/M
3300001353|JGI20159J14440_10075226All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter1150Open in IMG/M
3300001353|JGI20159J14440_10101623All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter909Open in IMG/M
3300001353|JGI20159J14440_10189742Not Available571Open in IMG/M
3300001354|JGI20155J14468_10076651All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter1264Open in IMG/M
3300001354|JGI20155J14468_10132092All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter824Open in IMG/M
3300001954|GOS2235_1046488All Organisms → cellular organisms → Bacteria → Proteobacteria1634Open in IMG/M
3300003477|nap3_10102303Not Available679Open in IMG/M
3300003588|JGI26247J51722_1049638All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter825Open in IMG/M
3300004276|Ga0066610_10150749All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter775Open in IMG/M
3300005404|Ga0066856_10317955Not Available670Open in IMG/M
3300005514|Ga0066866_10193007All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter716Open in IMG/M
3300005521|Ga0066862_10072779All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter1189Open in IMG/M
3300006026|Ga0075478_10047991All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter1401Open in IMG/M
3300006166|Ga0066836_10596807Not Available668Open in IMG/M
3300006191|Ga0075447_10190091Not Available678Open in IMG/M
3300006191|Ga0075447_10217348Not Available625Open in IMG/M
3300006193|Ga0075445_10195479All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter708Open in IMG/M
3300006345|Ga0099693_1088155All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus1597Open in IMG/M
3300006947|Ga0075444_10187721All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter843Open in IMG/M
3300007623|Ga0102948_1142887All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter731Open in IMG/M
3300008950|Ga0102891_1185874Not Available608Open in IMG/M
3300009049|Ga0102911_1029048All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter1644Open in IMG/M
3300009071|Ga0115566_10635484Not Available595Open in IMG/M
3300009071|Ga0115566_10737507Not Available544Open in IMG/M
3300009077|Ga0115552_1308062Not Available632Open in IMG/M
3300009086|Ga0102812_10759045Not Available536Open in IMG/M
3300009172|Ga0114995_10610578Not Available596Open in IMG/M
3300009173|Ga0114996_10468128All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter955Open in IMG/M
3300009420|Ga0114994_10169552All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter1476Open in IMG/M
3300009420|Ga0114994_10950541Not Available556Open in IMG/M
3300009422|Ga0114998_10202939All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter942Open in IMG/M
3300009425|Ga0114997_10297215All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter895Open in IMG/M
3300009425|Ga0114997_10408375All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter733Open in IMG/M
3300009425|Ga0114997_10590626Not Available586Open in IMG/M
3300009443|Ga0115557_1043784All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter2054Open in IMG/M
3300009481|Ga0114932_10918510Not Available504Open in IMG/M
3300009495|Ga0115571_1233071All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter744Open in IMG/M
3300009497|Ga0115569_10267762All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter763Open in IMG/M
3300009508|Ga0115567_10229656All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter1187Open in IMG/M
3300009512|Ga0115003_10071165All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique2172Open in IMG/M
3300009526|Ga0115004_10030982All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique3575Open in IMG/M
3300009526|Ga0115004_10715927Not Available594Open in IMG/M
3300009705|Ga0115000_10715980Not Available617Open in IMG/M
3300009705|Ga0115000_10993554Not Available511Open in IMG/M
3300009785|Ga0115001_10288350All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter1043Open in IMG/M
3300009785|Ga0115001_10409966All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter846Open in IMG/M
3300012928|Ga0163110_10671399All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter806Open in IMG/M
3300016745|Ga0182093_1072875All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique814Open in IMG/M
3300017724|Ga0181388_1052701All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique981Open in IMG/M
3300017735|Ga0181431_1108796Not Available620Open in IMG/M
3300017741|Ga0181421_1033761All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique1380Open in IMG/M
3300017743|Ga0181402_1069053All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique935Open in IMG/M
3300017769|Ga0187221_1241983Not Available512Open in IMG/M
3300017964|Ga0181589_10365346All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique958Open in IMG/M
3300018420|Ga0181563_10610079Not Available606Open in IMG/M
3300019459|Ga0181562_10536401Not Available553Open in IMG/M
3300019708|Ga0194016_1002547All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique1727Open in IMG/M
3300019765|Ga0194024_1017740All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique1509Open in IMG/M
3300020317|Ga0211688_1071642Not Available668Open in IMG/M
3300020372|Ga0211683_10064013All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique1201Open in IMG/M
3300020372|Ga0211683_10164860All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique710Open in IMG/M
3300020376|Ga0211682_10248196Not Available680Open in IMG/M
3300020379|Ga0211652_10172380Not Available659Open in IMG/M
3300020385|Ga0211677_10256642All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique709Open in IMG/M
3300020388|Ga0211678_10134699All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique1070Open in IMG/M
3300020396|Ga0211687_10341358Not Available585Open in IMG/M
3300021185|Ga0206682_10165050All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique1033Open in IMG/M
3300021368|Ga0213860_10504608Not Available517Open in IMG/M
3300021375|Ga0213869_10402748Not Available559Open in IMG/M
3300021959|Ga0222716_10455744All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique729Open in IMG/M
3300022907|Ga0255775_1038577All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique2510Open in IMG/M
3300022907|Ga0255775_1054050All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter1975Open in IMG/M
(restricted) 3300022920|Ga0233426_10024728All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique3209Open in IMG/M
(restricted) 3300022920|Ga0233426_10060800All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter1769Open in IMG/M
(restricted) 3300022920|Ga0233426_10201482All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter816Open in IMG/M
(restricted) 3300023109|Ga0233432_10220100All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter931Open in IMG/M
3300023180|Ga0255768_10112704All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter1795Open in IMG/M
3300024185|Ga0228669_1032103All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter1148Open in IMG/M
3300024188|Ga0228602_1007482All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter1255Open in IMG/M
3300024231|Ga0233399_1035995All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter1385Open in IMG/M
3300024236|Ga0228655_1090603Not Available658Open in IMG/M
(restricted) 3300024299|Ga0233448_1154252Not Available590Open in IMG/M
3300024301|Ga0233451_10216815All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter800Open in IMG/M
3300024314|Ga0228657_1040438All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter1031Open in IMG/M
3300024346|Ga0244775_11153646Not Available606Open in IMG/M
3300024413|Ga0233393_1035393All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter1233Open in IMG/M
3300024508|Ga0228663_1101348Not Available521Open in IMG/M
3300025425|Ga0208646_1067503Not Available613Open in IMG/M
3300025658|Ga0209659_1054070All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter1459Open in IMG/M
3300025662|Ga0209664_1113295All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter768Open in IMG/M
3300025666|Ga0209601_1119638All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter762Open in IMG/M
3300025681|Ga0209263_1028121All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter2056Open in IMG/M
3300025695|Ga0209653_1143256All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter712Open in IMG/M
3300025707|Ga0209667_1191041Not Available580Open in IMG/M
3300025722|Ga0209660_1167312All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter720Open in IMG/M
3300025822|Ga0209714_1144883Not Available611Open in IMG/M
3300026517|Ga0228607_1024173All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique1540Open in IMG/M
3300026517|Ga0228607_1084483All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique800Open in IMG/M
3300027251|Ga0208809_1019546All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique1280Open in IMG/M
3300027779|Ga0209709_10240764All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique810Open in IMG/M
3300027779|Ga0209709_10321235Not Available649Open in IMG/M
3300027779|Ga0209709_10332982Not Available631Open in IMG/M
3300027779|Ga0209709_10422551Not Available519Open in IMG/M
3300027779|Ga0209709_10426784Not Available515Open in IMG/M
3300027788|Ga0209711_10260418All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique768Open in IMG/M
3300028194|Ga0257106_1021794All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter2562Open in IMG/M
3300028273|Ga0228640_1115373Not Available517Open in IMG/M
3300028297|Ga0228617_1056068All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique1088Open in IMG/M
3300028414|Ga0228627_1021142All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique2077Open in IMG/M
3300028419|Ga0228625_1082753Not Available659Open in IMG/M
3300031510|Ga0308010_1132667All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique942Open in IMG/M
3300031612|Ga0308009_10377401Not Available518Open in IMG/M
3300031625|Ga0302135_10008064All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique6006Open in IMG/M
3300031630|Ga0308004_10297453Not Available625Open in IMG/M
3300031656|Ga0308005_10182436Not Available561Open in IMG/M
3300031659|Ga0307986_10415261Not Available534Open in IMG/M
3300031695|Ga0308016_10259493Not Available650Open in IMG/M
3300031757|Ga0315328_10408855All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique787Open in IMG/M
3300031774|Ga0315331_10644576All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique754Open in IMG/M
3300032011|Ga0315316_11557360Not Available518Open in IMG/M
3300032047|Ga0315330_10361707All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique902Open in IMG/M
3300032088|Ga0315321_10381489All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique879Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine19.12%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine13.97%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater11.03%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine10.29%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine6.62%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh5.88%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater4.41%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine4.41%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater3.68%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine3.68%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater3.68%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine2.94%
MarineEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Marine1.47%
SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment0.74%
FreshwaterEnvironmental → Aquatic → Freshwater → River → Unclassified → Freshwater0.74%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine0.74%
Environmental And Host-AssociatedEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Environmental And Host-Associated0.74%
Surface SeawaterEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater0.74%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous0.74%
EstuarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine0.74%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water0.74%
EstuarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Estuarine0.74%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface0.74%
Saline LakeEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Lake0.74%
WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Water0.74%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
2166559013Marine microbial communities from the Atlantic Ocean, for comparison studies - Ocean1 (Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY01 3688)EnvironmentalOpen in IMG/M
3300000148Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 47 07/07/10 100mEnvironmentalOpen in IMG/M
3300000153Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 39 11/10/09 135mEnvironmentalOpen in IMG/M
3300000167Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 39 11/10/09 120mEnvironmentalOpen in IMG/M
3300000192Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 60 08/10/11 100mEnvironmentalOpen in IMG/M
3300000193Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 47 07/07/10 135mEnvironmentalOpen in IMG/M
3300000224Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 34 06/16/09 10mEnvironmentalOpen in IMG/M
3300000225Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 34 06/16/09 120mEnvironmentalOpen in IMG/M
3300000237Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 34 06/16/09 150mEnvironmentalOpen in IMG/M
3300000265Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - sample_A_09_P04_10EnvironmentalOpen in IMG/M
3300000324Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 48 08/11/10 100mEnvironmentalOpen in IMG/M
3300001353Pelagic Microbial community sample from North Sea - COGITO 998_met_09EnvironmentalOpen in IMG/M
3300001354Pelagic Microbial community sample from North Sea - COGITO 998_met_05EnvironmentalOpen in IMG/M
3300001954Marine microbial communities from Colon, Panama - GS019EnvironmentalOpen in IMG/M
3300003477Estuarine microbial communities from the Sarno estuary, Gulf of Naples, Italy - Sample Station 3EnvironmentalOpen in IMG/M
3300003588Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI072_LV_100m_DNAEnvironmentalOpen in IMG/M
3300004276Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI075_LV_DNA_165mEnvironmentalOpen in IMG/M
3300005404Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV205EnvironmentalOpen in IMG/M
3300005514Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV263EnvironmentalOpen in IMG/M
3300005521Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV255EnvironmentalOpen in IMG/M
3300006026Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006166Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV91EnvironmentalOpen in IMG/M
3300006191Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG104-DNAEnvironmentalOpen in IMG/M
3300006193Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG029-DNAEnvironmentalOpen in IMG/M
3300006345Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT224_1_0075mEnvironmentalOpen in IMG/M
3300006947Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG017-DNAEnvironmentalOpen in IMG/M
3300007623Water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_A_H2O_MGEnvironmentalOpen in IMG/M
3300008950Estuarine microbial communities from the Columbia River estuary - metaG 1552A-02EnvironmentalOpen in IMG/M
3300009049Estuarine microbial communities from the Columbia River estuary - metaG 1558A-02EnvironmentalOpen in IMG/M
3300009071Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405EnvironmentalOpen in IMG/M
3300009077Pelagic marine microbial communities from North Sea - COGITO_mtgs_110328EnvironmentalOpen in IMG/M
3300009086Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.713EnvironmentalOpen in IMG/M
3300009172Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154EnvironmentalOpen in IMG/M
3300009173Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134EnvironmentalOpen in IMG/M
3300009420Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152EnvironmentalOpen in IMG/M
3300009422Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_138EnvironmentalOpen in IMG/M
3300009425Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136EnvironmentalOpen in IMG/M
3300009443Pelagic marine microbial communities from North Sea - COGITO_mtgs_110421EnvironmentalOpen in IMG/M
3300009481Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaGEnvironmentalOpen in IMG/M
3300009495Pelagic marine microbial communities from North Sea - COGITO_mtgs_120531EnvironmentalOpen in IMG/M
3300009497Pelagic marine microbial communities from North Sea - COGITO_mtgs_120503EnvironmentalOpen in IMG/M
3300009508Pelagic marine microbial communities from North Sea - COGITO_mtgs_120412EnvironmentalOpen in IMG/M
3300009512Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88EnvironmentalOpen in IMG/M
3300009526Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_90EnvironmentalOpen in IMG/M
3300009705Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128EnvironmentalOpen in IMG/M
3300009785Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130EnvironmentalOpen in IMG/M
3300012928Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St17 metaGEnvironmentalOpen in IMG/M
3300016745Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041411BS metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300017724Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 11 SPOT_SRF_2010-05-17EnvironmentalOpen in IMG/M
3300017735Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 54 SPOT_SRF_2014-05-21EnvironmentalOpen in IMG/M
3300017741Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 44 SPOT_SRF_2013-06-19EnvironmentalOpen in IMG/M
3300017743Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 25 SPOT_SRF_2011-08-17EnvironmentalOpen in IMG/M
3300017769Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22 (version 2)EnvironmentalOpen in IMG/M
3300017964Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071410BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018420Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011512CT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300019459Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011511BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300019708Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? BRC_2-3_MGEnvironmentalOpen in IMG/M
3300019765Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW13Sep16_MGEnvironmentalOpen in IMG/M
3300020317Marine microbial communities from Tara Oceans - TARA_B100000767 (ERX555998-ERR599027)EnvironmentalOpen in IMG/M
3300020372Marine microbial communities from Tara Oceans - TARA_B100000787 (ERX556133-ERR599090)EnvironmentalOpen in IMG/M
3300020376Marine microbial communities from Tara Oceans - TARA_B100000795 (ERX555997-ERR599121)EnvironmentalOpen in IMG/M
3300020379Marine microbial communities from Tara Oceans - TARA_B100000902 (ERX556001-ERR599168)EnvironmentalOpen in IMG/M
3300020385Marine microbial communities from Tara Oceans - TARA_B100001059 (ERX556045-ERR598965)EnvironmentalOpen in IMG/M
3300020388Marine microbial communities from Tara Oceans - TARA_B100001063 (ERX555965-ERR599064)EnvironmentalOpen in IMG/M
3300020396Marine microbial communities from Tara Oceans - TARA_B100000767 (ERX555915-ERR599122)EnvironmentalOpen in IMG/M
3300021185Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 40m 12015EnvironmentalOpen in IMG/M
3300021368Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO550EnvironmentalOpen in IMG/M
3300021375Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO132EnvironmentalOpen in IMG/M
3300021959Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13DEnvironmentalOpen in IMG/M
3300022907Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011511BT metaGEnvironmentalOpen in IMG/M
3300022920 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_118_April2016_10_MGEnvironmentalOpen in IMG/M
3300023109 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_10_MGEnvironmentalOpen in IMG/M
3300023180Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaGEnvironmentalOpen in IMG/M
3300024185Seawater microbial communities from Monterey Bay, California, United States - 84DEnvironmentalOpen in IMG/M
3300024188Seawater microbial communities from Monterey Bay, California, United States - 2DEnvironmentalOpen in IMG/M
3300024231Seawater microbial communities from Monterey Bay, California, United States - 43DEnvironmentalOpen in IMG/M
3300024236Seawater microbial communities from Monterey Bay, California, United States - 67DEnvironmentalOpen in IMG/M
3300024299 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_124_October2016_150_MGEnvironmentalOpen in IMG/M
3300024301Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011504CT (spades assembly)EnvironmentalOpen in IMG/M
3300024314Seawater microbial communities from Monterey Bay, California, United States - 70DEnvironmentalOpen in IMG/M
3300024346Whole water sample coassemblyEnvironmentalOpen in IMG/M
3300024413Seawater microbial communities from Monterey Bay, California, United States - 21DEnvironmentalOpen in IMG/M
3300024508Seawater microbial communities from Monterey Bay, California, United States - 77DEnvironmentalOpen in IMG/M
3300025425Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UK8 (SPAdes)EnvironmentalOpen in IMG/M
3300025658Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI072_LV_10m_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025662Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI073_LV_150m_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025666Pelagic marine microbial communities from North Sea - COGITO_mtgs_110426 (SPAdes)EnvironmentalOpen in IMG/M
3300025681Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI075_LV_DNA_100m (SPAdes)EnvironmentalOpen in IMG/M
3300025695Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_116LU_22_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025707Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI074_LV_165m_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025722Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI072_LV_100m_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025822Pelagic marine microbial communities from North Sea - COGITO_mtgs_110414 (SPAdes)EnvironmentalOpen in IMG/M
3300026517Seawater microbial communities from Monterey Bay, California, United States - 8DEnvironmentalOpen in IMG/M
3300027251Estuarine microbial communities from the Columbia River estuary - metaG 1556B-02 (SPAdes)EnvironmentalOpen in IMG/M
3300027779Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136 (SPAdes)EnvironmentalOpen in IMG/M
3300027788Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88 (SPAdes)EnvironmentalOpen in IMG/M
3300028194Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_10mEnvironmentalOpen in IMG/M
3300028273Seawater microbial communities from Monterey Bay, California, United States - 51DEnvironmentalOpen in IMG/M
3300028297Seawater microbial communities from Monterey Bay, California, United States - 18DEnvironmentalOpen in IMG/M
3300028414Seawater microbial communities from Monterey Bay, California, United States - 33DEnvironmentalOpen in IMG/M
3300028419Seawater microbial communities from Monterey Bay, California, United States - 30DEnvironmentalOpen in IMG/M
3300031510Marine microbial communities from water near the shore, Antarctic Ocean - #129EnvironmentalOpen in IMG/M
3300031612Marine microbial communities from water near the shore, Antarctic Ocean - #127EnvironmentalOpen in IMG/M
3300031625Marine microbial communities from Western Arctic Ocean, Canada - CBN3_surfaceEnvironmentalOpen in IMG/M
3300031630Marine microbial communities from water near the shore, Antarctic Ocean - #38EnvironmentalOpen in IMG/M
3300031656Marine microbial communities from water near the shore, Antarctic Ocean - #67EnvironmentalOpen in IMG/M
3300031659Marine microbial communities from Ellis Fjord, Antarctic Ocean - #82EnvironmentalOpen in IMG/M
3300031695Marine microbial communities from water near the shore, Antarctic Ocean - #233EnvironmentalOpen in IMG/M
3300031757Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 32315EnvironmentalOpen in IMG/M
3300031774Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 34915EnvironmentalOpen in IMG/M
3300032011Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 3416EnvironmentalOpen in IMG/M
3300032047Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 34915EnvironmentalOpen in IMG/M
3300032088Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 21515EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
Ocean1-_000510502166559013Environmental And Host-AssociatedYREQLVRENISKILLSIYDIDYYSQKKTTFIISERQYVSFFIAIYT
SI47jul10_100mDRAFT_100872143300000148MarineISKILLSICDIDYYSQKKTTFIISERQYVSFFIINYT*
SI39nov09_135mDRAFT_100870243300000153MarineILLSICDIDYYSQKKTTFIISERQYVSFFIINYT*
SI39nov09_120mDRAFT_102579313300000167MarineKILLSICDIDYYSQKKTTFIISERQYVSFFIINYT*
SI39nov09_120mDRAFT_103347313300000167MarineGPGINISKILLSICDIDYYSQKKTTFIISERQYVSFFKIIYT*
SI39nov09_120mDRAFT_108515223300000167MarineNTSTILLSISVIDYYSQKKITFIITERQYVNFFN*
SI60aug11_100mDRAFT_100877843300000192MarineNISKILLSICDIDYYSQKKTTFIISERQYVSFFIINYT*
SI60aug11_100mDRAFT_107053013300000192MarinePGINISKILLSICDIDYYSQKKTTFIISERQYVSFFKIIYT*
SI47jul10_135mDRAFT_101003143300000193MarineNISKILLSICDIDYYSQKKTTFIISERQYVSFFKIIYT*
SI34jun09_10mDRAFT_102543913300000224MarineSSLPAGPGINTSTILLSISVIDYYSQKKITFIITERQYVNFFN*
SI34jun09_120mDRAFT_102109533300000225MarineGPGINISKILLSICDIDYYSQKKTTFIISERQYVSFFIINYT*
SI34jun09_150mDRAFT_100561113300000237MarineSLPAGPGINISKILLSICDIDYYSQKKTTFIISERQYVSFFKIIYT*
LP_A_09_P04_10DRAFT_105665513300000265MarineAGPGINISKILLSINDIDYCSQKKTTFIISERQYVSFFITIYT*
SI48aug10_100mDRAFT_105511523300000324MarineILLSICDIDYYSQKKTRSIISERQYVNFFIIIYT*
JGI20159J14440_1007522633300001353Pelagic MarineLLSISVIDYYSQKKITFIITKRQYVNYFIYCILD*
JGI20159J14440_1010162333300001353Pelagic MarinePAGPGINISKILLSIYDIDYYSQKKTTFITSERQNVSYFIINYT*
JGI20159J14440_1018974213300001353Pelagic MarineISKILLSICDIDYYSQKKTTFIISERQYVSYFIINYT*
JGI20155J14468_1007665133300001354Pelagic MarineSLPAGPGIKISKILLSICDIDYYSQKKTRFITSERQYVSFFIIIYT*
JGI20155J14468_1013209213300001354Pelagic MarineISKILLSICDIDYYSQKKTTFITSERQYVSFFILMYT*
GOS2235_104648843300001954MarineFLLLKYFASSLPAGPGINISLILLSIKAIDYYSQKKCTFIISERQYVKFFF*
nap3_1010230313300003477EstuarineSSLPAGPGMNISKILLSICAIDYCSQKKTRFITSERQYVSFFIIIYT*
JGI26247J51722_104963813300003588MarinePGMNISKILLSICAIDYCSQKKTRFITSERQYVSFFIIIYT*
Ga0066610_1015074913300004276MarineASSLPAGPGIKISKILLSICDIDYYSQKKTTFITSERQYVSFFILMYT*
Ga0066856_1031795523300005404MarinePGINISKILLSICDIDYYSQKKTTFITSERQYVSFFIINYT*
Ga0066866_1019300713300005514MarinePAGPGINISKILLSIIVIDYYSQKKITFIISTLQNVNFFICET*
Ga0066862_1007277913300005521MarineYFASSLPAGPGINISKILLSIIVIDYYSQKKITFIISTLQNVNFFICET*
Ga0075478_1004799133300006026AqueousAGPGINISKILLSIYDIDYYSQKKTTFIISERQYVSFFIVIYT*
Ga0066836_1059680723300006166MarineLLLKYFASSLPAGPGINISKILLSIIVIDYYSQKKITFIISTLQNVNFFICET*
Ga0075447_1019009123300006191MarinePAGPGIKTSTILLSINDIDYYSQKKVTSIISERQYVNFFI*
Ga0075447_1021734823300006191MarineTSTILLSINDIDYYSQKKVTSIISERQYVNFFYAINT*
Ga0075445_1019547933300006193MarineGPGIKTSTILLSINVIDYYSQKKITSIISKRQYVNFFT*
Ga0099693_108815563300006345MarineAGPGINISKILLSIFVNDNYSQKKIRHIITVRQYDSFFLL*
Ga0075444_1018772133300006947MarineLLSINDIDYYSQKKNTHIITKRHYVIFFAYCILD*
Ga0102948_114288733300007623WaterPAGPGINISKILLSIYDIDYYSQKKTTFIISERQYVSFFIAMYT*
Ga0102891_118587423300008950EstuarineFASSLPTGPGINISKILLSICDIDYYSQKKTTFITSERQYVSFFILMYT*
Ga0102911_102904833300009049EstuarineLASNLPAGPGMNISKILLSICAIDYCSQKKTRFITSERQYVSFFIIIYT*
Ga0115566_1063548423300009071Pelagic MarinePAGPGINISKILLSICDIDYYSQKKTTFITSERQYVSYFIINYT*
Ga0115566_1073750723300009071Pelagic MarineLPAGPGIKISKILLSICDIDYYSQKKTTFITSERQYVSFFITLYT*
Ga0115552_130806223300009077Pelagic MarineSSLPAGPGIKISKILLSICDIDYYSQKKTTFITSERQYVSYFIINYT*
Ga0102812_1075904523300009086EstuarinePAGPGMKISKILLSISAIDYYSQKKITFIISERQYVSYFIINYT*
Ga0114995_1061057813300009172MarineGPGIKTSTILLSINDIDYYSQKKNTLIITKRQYVIFFTYCILD*
Ga0114996_1046812833300009173MarineLASILPAGPGIKTSTILLSINDIDYYSQKKNTLIITKRQYVIFFTYCILD*
Ga0114994_1016955233300009420MarineASILPAGPGMKTSTILLSISVIDYYSQKKIRLIITKRQYVNFFRQSILD*
Ga0114994_1095054113300009420MarineTILLSINVIDYYSQKKITIITPKRQYVNFFTESILD*
Ga0114998_1020293933300009422MarinePGIKTSTILLSINVIDYYSQKKITFITTKRQYVNFFMQSKLD*
Ga0114997_1029721513300009425MarineGPGIKTSTILLSINVIDYYSQKKITFITTKRQYVNFFMQSKLD*
Ga0114997_1040837533300009425MarinePGIKTSTILLSINVIDYYSQKKITSIISERQYVNFFYVIYT*
Ga0114997_1059062613300009425MarineSLPAGPGIKISTILLSINVIDYYSQKKNITIITKRQYVNFFTQSILD*
Ga0115557_104378433300009443Pelagic MarineGPGINISKILLSIYDIDYYSQKKTTFIISERQYVSFFIAMYT*
Ga0114932_1091851023300009481Deep SubsurfaceAGPGINISKILLSICDIDYYSQKKTTFITSERQYVSFFIINYT*
Ga0115571_123307113300009495Pelagic MarineGPGINTSTILLSISVIDYYSQKKITFITTERQYVNFFK*
Ga0115569_1026776213300009497Pelagic MarineGPGMNISKILLSISAIDYYSQKKITFIISERQYVSYFIINYT*
Ga0115567_1022965613300009508Pelagic MarineASSLPAGPGIKTSTILLSISVIDYYSQKKITFITSKRQYVNFFSILNLTKLVKFV*
Ga0115003_1007116513300009512MarineAGPGMKISKILLSISAIDYYSQKKITFIISERQYVSFFIAIYT*
Ga0115004_1003098213300009526MarinePGIKTSTILLSISVIDYYSQKKNTSIISERQYVNFFSYSILD*
Ga0115004_1071592713300009526MarineILPAGPGIKTSTILLSISVIDYYLQKKITSIITKRQYVNFFTISKLD*
Ga0115000_1071598023300009705MarineLASILPAGPGIKISTILLSISVIDYYSQKKITSIITKRQYVNFFKQSILD*
Ga0115000_1099355413300009705MarineILLSISVIDYYSQKKITSIITKRQYVNFFTQSILD*
Ga0115001_1028835033300009785MarineSILPAGPGIKTSTILLSISVIDYYSQKKITSIITKRQYVNFFTQSILD*
Ga0115001_1040996613300009785MarinePGIKTSTILLSINDIDYYSQKKVTSIISERQYVNFFM*
Ga0163110_1067139913300012928Surface SeawaterAGPGMKISKILLSISAIDYYSQKKITFITCQRQYVVFFLIFYT*
Ga0182093_107287533300016745Salt MarshSLPAGPGINISKILLSIYDIDYYSQKKTTFIISERQYVSFFIAMYT
Ga0181388_105270133300017724SeawaterPAGPGINISKILLSISAIDYCSQKKTTLIISERQYVSFFIIIYT
Ga0181431_110879623300017735SeawaterSSLPAGPGINISKILLSICDIDYYSQKKTTFIISERQYVSYFIINYT
Ga0181421_103376113300017741SeawaterSSLPAGPGINTSTILLSISVIDYYSQKKITFITTERQYVNFFK
Ga0181402_106905313300017743SeawaterGPGINISKILLSICDIDYYSQKKTTFIISERQYVSYFIINYT
Ga0187221_124198313300017769SeawaterGPVINISKILLSIVVIDYYSQKKIRFITTARQNVSFFFTLDT
Ga0181589_1036534613300017964Salt MarshLPAGPGINISKILLSISDIDYYSQKKCTFIISQRQYVSFFFKL
Ga0181563_1061007913300018420Salt MarshAGPGMNISKILLSIYDIDYYSQKKTTFIISERQYVSFFIAIYT
Ga0181562_1053640123300019459Salt MarshPAGPGINISKILLSIYDIDYYSQKKTTFIISERQYVIFFIAIYT
Ga0194016_100254713300019708SedimentAGPGINISKILLSIYDIDYYSQKKTTFIISERQYVSFFIAMYT
Ga0194024_101774033300019765FreshwaterPAGPGINISKILLSIYDIDYYSQKKTTFIISERQYVSFFIAMYT
Ga0211688_107164223300020317MarineLPAGPGIKISKILLSISAIDYYSQKKITFITSQRQYVSYFIIFYT
Ga0211683_1006401333300020372MarinePAGPGIKTSIILLSINVIDYYYQKKNIFIITKRQYVNFFIYCILD
Ga0211683_1016486013300020372MarinePAGPGINTSTILLSINDIDYYSQKKVTSIISERQYVNFFM
Ga0211682_1024819623300020376MarinePGIKTSTILLSINVIDYYSQKKITSIISERQYVNFFA
Ga0211652_1017238013300020379MarineKISKILLSISVIDYHSQKKITFIISERQYVTFFVIIYT
Ga0211677_1025664233300020385MarineGINISKILLSICDIDYYSQKKTTFITSERQYVSYFIINYT
Ga0211678_1013469913300020388MarineLPAGPGIKTSTILLSISVIDYYSQKKITFITSKRQYVNFFI
Ga0211687_1034135813300020396MarinePAGPGINTSTILLSINDIDYYSQKKVTFIISERQYVNFFYVIYT
Ga0206682_1016505033300021185SeawaterASSLPAGPGINISKILLSICDIDYYSQKKTTFIISERQYVSFFKIIYT
Ga0213860_1050460823300021368SeawaterSLPAGPGINISKILLSIYDIDYYSQKKTTFITSERQYVSFFIIIYT
Ga0213869_1040274813300021375SeawaterSLPAGPGIKISKILLSICDIDYYSQKKTTFITSERQYVSFFITLYT
Ga0222716_1045574433300021959Estuarine WaterASSLPAGPGINTSTILLSISVIDYYSQKKITFITTERQYVNFFK
Ga0255775_103857743300022907Salt MarshSRPAGPGINISKILLSIYDIDYYSQKKTTFIISERQYVSFFIAIYT
Ga0255775_105405033300022907Salt MarshPAGPGINISKILLSIYDIDYYSQKKTTFIISERQYVSFFIVIYT
(restricted) Ga0233426_1002472853300022920SeawaterAGPEINISKILLSICDIDYYSQKKTTFIISERQYVSFFKIIYT
(restricted) Ga0233426_1006080033300022920SeawaterSNLPAGPGMNISKILLSICAIDYCSQKKTRFITSERQYVSFFIIIYT
(restricted) Ga0233426_1020148233300022920SeawaterSSLPAGPGIKISKILLSICDIDYYSQKKTTFITSERQYVSFFILMYT
(restricted) Ga0233432_1022010033300023109SeawaterSLPAGPGINISKILLSICDIDYYSQKKTTFIISERQYVSFFKIIYT
Ga0255768_1011270413300023180Salt MarshSLPAGPGINISKILLSIYDIDYYSQKKTTFIISERQYVSFFIVIYT
Ga0228669_103210313300024185SeawaterLPAGPGINISKILLSICAIDYCSQKKTRFITSERQYVSFFIIIYT
Ga0228602_100748233300024188SeawaterASSLPAGPGINISKILLSICDIDYYSQKKTTFIISERQYVSFFIVNYT
Ga0233399_103599533300024231SeawaterAGPGINISKILLSICDIDYYSQKKTTFITSERQYVSYFIINYT
Ga0228655_109060313300024236SeawaterPGINISKILLSIYDIDYYSQKKTTFIISERQYVSFFIAIYT
(restricted) Ga0233448_115425223300024299SeawaterSLPAGPGINISKILLSICDIDYYSQKKTRSIISERQYVNFFIIIYT
Ga0233451_1021681533300024301Salt MarshSRPAGPGINISKILLSIYDIDYYSQKKTTFIISERQYVSFFIVIYT
Ga0228657_104043833300024314SeawaterFASSLPAGPGINISKILLSINDIDYYSQKKTTFITSERQYVSFFIAMYT
Ga0244775_1115364623300024346EstuarineLPAGPGINISKILLSINDIDYCSQKKTTFIISERQYVSFFIAIYT
Ga0233393_103539333300024413SeawaterASSLPAGPGINISKILLSICAIDYCSQKKTRFITSERQYVSFFIIIYT
Ga0228663_110134813300024508SeawaterASSLPAGPGINIYKILLSICAIDYCSQKKTRFITSERQYVSFFIIIYT
Ga0208646_106750313300025425Saline LakeTSTILLSINDIDYYSQKKNTHITTKRQYVIFFAYCILD
Ga0209659_105407013300025658MarineGPGINTSTILLSISVIDYYSQKKITFIITERQYVNFFN
Ga0209664_111329533300025662MarineSLPAGPGINISKILFSISDIDYYSQKKTIFITSERQYVSFFTLIYT
Ga0209601_111963833300025666Pelagic MarineLPAGPGINTSTILLSISVIDYYSQKKITFIITERQYVNFFN
Ga0209263_102812133300025681MarineSSLPAGPGINISKILLSICDIDYYSQKKTRSIISERQYVNFFIIIYT
Ga0209653_114325633300025695MarineLPAGPGINISKILLSIYDIDYYSQKKTTFIISERQYVSFFIVIYT
Ga0209667_119104113300025707MarineSSLPAGPGINISKILLSICDIDYYSQKKTTFIISERQYVSFFKIIYT
Ga0209660_116731233300025722MarineSLPAGPGINISKILFSISDIDYYSQKKTIFITSERQYVSFFISIYT
Ga0209714_114488313300025822Pelagic MarineLPAGPGINISKILLSIYDIDYYSQKKTTFIISERQYVSFFIVFYT
Ga0228607_102417313300026517SeawaterLPAGPGINISKILLSINDIDYYSQKKTTFITSERQYVSFFIAMYT
Ga0228607_108448313300026517SeawaterLPAGPGINISKILLSIYDIDYYSQKKTTFIISERQYVSYFIINYT
Ga0208809_101954633300027251EstuarineSLPAGPGINISKILLSICDIDYYSQKKTTFITSERQYVSFFIIIYT
Ga0209709_1024076433300027779MarineIKTSTILLSINDIDYYSQKKVTSIISERQYVNFFM
Ga0209709_1032123513300027779MarineAGPGIKISTILLSICVIDYYSQKKITSIISKRQYVNFFS
Ga0209709_1033298223300027779MarineSTILLSINVIDYYFQKKNTPIITKRQYVNFFEKSILD
Ga0209709_1042255123300027779MarineAGPGIKTSTILLSISVIDYYSQKKITSIITKRQYVNFFK
Ga0209709_1042678413300027779MarineLPAGPGINTSTILLSINDIDYYSQKKATSIISERQYVIFFLYCILD
Ga0209711_1026041813300027788MarineSILPAGPGIKTSTILLSINDIDYYSQKKVTSIISERQYVNFFI
Ga0257106_102179413300028194MarinePAGPGIKTSTILLSINVIDYYSQKKITFITTKRQYVNFFI
Ga0228640_111537313300028273SeawaterLPAGPGINISKILLSIYDIDYYSQKKTTFIISERQYVSFFIAIYT
Ga0228617_105606813300028297SeawaterLPAGPGINISKILLSICAIDYCSQKKTRFITSERQYVSFFITIYT
Ga0228627_102114213300028414SeawaterPGINISKILFSISDIDYYSQKKTTFIISERQYVSFFIVNYT
Ga0228625_108275323300028419SeawaterGPGINISKILLSICAIDYCSQKKTRFITSERQYVSFFIIIYT
Ga0308010_113266713300031510MarineSLPAGPGMKISKILLSISAIDYYSQKKITFIISERQYVSFFI
Ga0308009_1037740113300031612MarinePGIKTSTILLSINDIDYYSQKKTTPIISERQYVNFFILSILD
Ga0302135_1000806483300031625MarinePAGPGIKISTILLSISVIDYYSQKKITSIITKRQYVNFFKQSILD
Ga0308004_1029745323300031630MarineTSTILLSISVIDYYSQKKITFIITKRQYVNFFKESILD
Ga0308005_1018243623300031656MarineILPAGPGIKTSTILLSINDIDYYSQKKTTPIISERQYVNFFILSILD
Ga0307986_1041526123300031659MarineTSTILLSISVIDYYSQKKNTTIITKRQYVNFFTQSILD
Ga0308016_1025949323300031695MarineGPGIKTSTILLSINVIDYYSQKKIRSIITKRQYVNFFM
Ga0315328_1040885513300031757SeawaterNISKILFSISDIDYYSQKKTIFITSERQYVSFFTLIYT
Ga0315331_1064457613300031774SeawaterLPAGPGINISNILLSICDIDYYSQKKCTFTTCERQYVSFFLN
Ga0315316_1155736023300032011SeawaterPGINTSTILLSISVIDYYSQKKITFIITERQYVNFFN
Ga0315330_1036170733300032047SeawaterSLPAGPGINISKILLSINDIDYYSQKKTTFITSERQYVSFFIAMYT
Ga0315321_1038148913300032088SeawaterSLPAGPGINISKILLSIYDIDYYSQKKTTFIISERQYVSFFIAIYT

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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