NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F057705

Metagenome / Metatranscriptome Family F057705

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F057705
Family Type Metagenome / Metatranscriptome
Number of Sequences 136
Average Sequence Length 55 residues
Representative Sequence MRRFTLLLLVVLLGGTDRLAAQETVETRGITSEVKIDEVIFGHLTELNGKFK
Number of Associated Samples 109
Number of Associated Scaffolds 136

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 84.33 %
% of genes near scaffold ends (potentially truncated) 91.91 %
% of genes from short scaffolds (< 2000 bps) 88.24 %
Associated GOLD sequencing projects 101
AlphaFold2 3D model prediction Yes
3D model pTM-score0.32

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (82.353 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(25.735 % of family members)
Environment Ontology (ENVO) Unclassified
(39.706 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(49.265 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 62.50%    β-sheet: 0.00%    Coil/Unstructured: 37.50%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.32
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 136 Family Scaffolds
PF04392ABC_sub_bind 37.50
PF03401TctC 6.62
PF01569PAP2 5.15
PF07883Cupin_2 2.21
PF02353CMAS 1.47
PF13473Cupredoxin_1 1.47
PF00072Response_reg 0.74
PF00550PP-binding 0.74
PF13410GST_C_2 0.74
PF01734Patatin 0.74
PF06411HdeA 0.74
PF08546ApbA_C 0.74
PF13439Glyco_transf_4 0.74
PF07758DUF1614 0.74
PF00211Guanylate_cyc 0.74
PF00589Phage_integrase 0.74
PF01965DJ-1_PfpI 0.74
PF10282Lactonase 0.74
PF05908Gamma_PGA_hydro 0.74
PF02518HATPase_c 0.74
PF01370Epimerase 0.74
PF03466LysR_substrate 0.74
PF03734YkuD 0.74

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 136 Family Scaffolds
COG2984ABC-type uncharacterized transport system, periplasmic componentGeneral function prediction only [R] 37.50
COG3181Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctCEnergy production and conversion [C] 6.62
COG2226Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenGCoenzyme transport and metabolism [H] 1.47
COG22272-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylaseCoenzyme transport and metabolism [H] 1.47
COG2230Cyclopropane fatty-acyl-phospholipid synthase and related methyltransferasesLipid transport and metabolism [I] 1.47
COG1376Lipoprotein-anchoring transpeptidase ErfK/SrfKCell wall/membrane/envelope biogenesis [M] 0.74
COG1752Predicted acylesterase/phospholipase RssA, containd patatin domainGeneral function prediction only [R] 0.74
COG1893Ketopantoate reductaseCoenzyme transport and metabolism [H] 0.74
COG2114Adenylate cyclase, class 3Signal transduction mechanisms [T] 0.74
COG3034Murein L,D-transpeptidase YafKCell wall/membrane/envelope biogenesis [M] 0.74
COG3621Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotRGeneral function prediction only [R] 0.74
COG4089Uncharacterized membrane proteinFunction unknown [S] 0.74
COG4195Phage-related replication protein YjqB, UPF0714/DUF867 familyMobilome: prophages, transposons [X] 0.74
COG4667Predicted phospholipase, patatin/cPLA2 familyLipid transport and metabolism [I] 0.74

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms82.35 %
UnclassifiedrootN/A17.65 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2228664022|INPgaii200_c0711151Not Available590Open in IMG/M
2228664022|INPgaii200_c0891402All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium614Open in IMG/M
3300002906|JGI25614J43888_10041848All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1420Open in IMG/M
3300004009|Ga0055437_10127271All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales773Open in IMG/M
3300004024|Ga0055436_10010098All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2061Open in IMG/M
3300004157|Ga0062590_102978262All Organisms → cellular organisms → Bacteria → Proteobacteria507Open in IMG/M
3300004267|Ga0066396_10010787All Organisms → cellular organisms → Bacteria1090Open in IMG/M
3300005172|Ga0066683_10355518All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium909Open in IMG/M
3300005179|Ga0066684_10883633All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium585Open in IMG/M
3300005332|Ga0066388_101860854All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1073Open in IMG/M
3300005332|Ga0066388_103584305All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium792Open in IMG/M
3300005332|Ga0066388_104139159All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium739Open in IMG/M
3300005332|Ga0066388_107447424Not Available549Open in IMG/M
3300005340|Ga0070689_100389322All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1176Open in IMG/M
3300005455|Ga0070663_100596745All Organisms → cellular organisms → Bacteria → Proteobacteria928Open in IMG/M
3300005535|Ga0070684_101903376All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium561Open in IMG/M
3300005713|Ga0066905_100133554All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1757Open in IMG/M
3300005713|Ga0066905_100714574All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae861Open in IMG/M
3300005764|Ga0066903_100338131All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium2421Open in IMG/M
3300005764|Ga0066903_108863937All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. WSM4349510Open in IMG/M
3300006163|Ga0070715_10526507Not Available681Open in IMG/M
3300006194|Ga0075427_10000133All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria6720Open in IMG/M
3300006846|Ga0075430_100049561All Organisms → cellular organisms → Bacteria3544Open in IMG/M
3300006854|Ga0075425_101531411All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium753Open in IMG/M
3300006904|Ga0075424_102614063All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium528Open in IMG/M
3300009100|Ga0075418_10163588Not Available2368Open in IMG/M
3300009176|Ga0105242_12262193All Organisms → cellular organisms → Bacteria589Open in IMG/M
3300009176|Ga0105242_13032447All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium520Open in IMG/M
3300009177|Ga0105248_11940419All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae668Open in IMG/M
3300009524|Ga0116225_1395144Not Available615Open in IMG/M
3300010043|Ga0126380_11091083All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria680Open in IMG/M
3300010043|Ga0126380_11474967All Organisms → cellular organisms → Bacteria → Proteobacteria601Open in IMG/M
3300010043|Ga0126380_11931702All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium538Open in IMG/M
3300010358|Ga0126370_10013343All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae4493Open in IMG/M
3300010358|Ga0126370_10192299All Organisms → cellular organisms → Bacteria1533Open in IMG/M
3300010358|Ga0126370_10713765All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium883Open in IMG/M
3300010358|Ga0126370_11274256Not Available687Open in IMG/M
3300010359|Ga0126376_10126464All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium2004Open in IMG/M
3300010360|Ga0126372_11037739All Organisms → cellular organisms → Bacteria834Open in IMG/M
3300010360|Ga0126372_11891481Not Available641Open in IMG/M
3300010361|Ga0126378_11869749All Organisms → cellular organisms → Bacteria683Open in IMG/M
3300010362|Ga0126377_10405284Not Available1375Open in IMG/M
3300010366|Ga0126379_10190332All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.1962Open in IMG/M
3300010376|Ga0126381_105089582All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium504Open in IMG/M
3300010398|Ga0126383_11678159All Organisms → cellular organisms → Bacteria724Open in IMG/M
3300012202|Ga0137363_10609972All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria921Open in IMG/M
3300012208|Ga0137376_10240307All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1570Open in IMG/M
3300012357|Ga0137384_11022678All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria664Open in IMG/M
3300012362|Ga0137361_10073192All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2910Open in IMG/M
3300012362|Ga0137361_10446687All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1188Open in IMG/M
3300012951|Ga0164300_10093799All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1302Open in IMG/M
3300012957|Ga0164303_10203365Not Available1098Open in IMG/M
3300012971|Ga0126369_10103909All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2579Open in IMG/M
3300012971|Ga0126369_10495248All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1279Open in IMG/M
3300012984|Ga0164309_10468101All Organisms → cellular organisms → Bacteria → Proteobacteria957Open in IMG/M
3300015373|Ga0132257_101453656All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales874Open in IMG/M
3300016270|Ga0182036_10338390All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1156Open in IMG/M
3300016270|Ga0182036_10385647All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1088Open in IMG/M
3300016270|Ga0182036_10741650All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium797Open in IMG/M
3300016294|Ga0182041_10617284All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium954Open in IMG/M
3300016319|Ga0182033_10330596All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1268Open in IMG/M
3300016319|Ga0182033_10810143All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria826Open in IMG/M
3300016319|Ga0182033_11380813All Organisms → cellular organisms → Bacteria634Open in IMG/M
3300016341|Ga0182035_10004807All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria7469Open in IMG/M
3300016341|Ga0182035_10652221All Organisms → cellular organisms → Bacteria913Open in IMG/M
3300016341|Ga0182035_11456560Not Available616Open in IMG/M
3300016357|Ga0182032_10191049All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1551Open in IMG/M
3300016404|Ga0182037_10997300All Organisms → cellular organisms → Bacteria730Open in IMG/M
3300016422|Ga0182039_10240043All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1470Open in IMG/M
3300016445|Ga0182038_10386120All Organisms → cellular organisms → Bacteria1170Open in IMG/M
3300018032|Ga0187788_10403025All Organisms → cellular organisms → Bacteria575Open in IMG/M
3300018067|Ga0184611_1069702All Organisms → cellular organisms → Bacteria → Proteobacteria1194Open in IMG/M
3300021444|Ga0213878_10043514All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1738Open in IMG/M
3300021478|Ga0210402_10652239All Organisms → cellular organisms → Bacteria → Proteobacteria974Open in IMG/M
3300021560|Ga0126371_13442180Not Available534Open in IMG/M
3300025910|Ga0207684_10427137All Organisms → cellular organisms → Bacteria → Proteobacteria1138Open in IMG/M
3300025928|Ga0207700_10766582All Organisms → cellular organisms → Bacteria862Open in IMG/M
3300025928|Ga0207700_11293243Not Available650Open in IMG/M
3300026319|Ga0209647_1012459All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales5625Open in IMG/M
3300027105|Ga0207944_1025985All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium503Open in IMG/M
3300027527|Ga0209684_1075851All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria525Open in IMG/M
3300027625|Ga0208044_1218411Not Available504Open in IMG/M
3300027748|Ga0209689_1215340All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium827Open in IMG/M
3300027873|Ga0209814_10000146All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales19804Open in IMG/M
3300028381|Ga0268264_10057307All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3259Open in IMG/M
3300028718|Ga0307307_10238703All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium579Open in IMG/M
3300028802|Ga0307503_10665858All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria581Open in IMG/M
3300030844|Ga0075377_10763807Not Available663Open in IMG/M
3300031057|Ga0170834_105833502All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria737Open in IMG/M
3300031231|Ga0170824_108168131All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria727Open in IMG/M
3300031474|Ga0170818_103625920All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1181Open in IMG/M
3300031543|Ga0318516_10602977All Organisms → cellular organisms → Bacteria627Open in IMG/M
3300031544|Ga0318534_10322779Not Available890Open in IMG/M
3300031544|Ga0318534_10822869All Organisms → cellular organisms → Bacteria521Open in IMG/M
3300031546|Ga0318538_10247296All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium957Open in IMG/M
3300031561|Ga0318528_10163411All Organisms → cellular organisms → Bacteria1188Open in IMG/M
3300031564|Ga0318573_10353662All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium788Open in IMG/M
3300031573|Ga0310915_10166462All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1530Open in IMG/M
3300031680|Ga0318574_10139967Not Available1368Open in IMG/M
3300031681|Ga0318572_10375406All Organisms → cellular organisms → Bacteria844Open in IMG/M
3300031682|Ga0318560_10490833All Organisms → cellular organisms → Bacteria665Open in IMG/M
3300031719|Ga0306917_10415873Not Available1051Open in IMG/M
3300031719|Ga0306917_10558767All Organisms → cellular organisms → Bacteria900Open in IMG/M
3300031723|Ga0318493_10493884Not Available676Open in IMG/M
3300031724|Ga0318500_10231306Not Available892Open in IMG/M
3300031736|Ga0318501_10231241All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium974Open in IMG/M
3300031747|Ga0318502_10166690All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1263Open in IMG/M
3300031770|Ga0318521_10243964All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1047Open in IMG/M
3300031771|Ga0318546_10782246All Organisms → cellular organisms → Bacteria672Open in IMG/M
3300031781|Ga0318547_10267275All Organisms → cellular organisms → Bacteria1034Open in IMG/M
3300031795|Ga0318557_10210014Not Available889Open in IMG/M
3300031796|Ga0318576_10326096All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium725Open in IMG/M
3300031805|Ga0318497_10631085All Organisms → cellular organisms → Bacteria601Open in IMG/M
3300031860|Ga0318495_10377935All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium626Open in IMG/M
3300031890|Ga0306925_10799891All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae978Open in IMG/M
3300031894|Ga0318522_10178179All Organisms → cellular organisms → Bacteria804Open in IMG/M
3300031894|Ga0318522_10365452All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium547Open in IMG/M
3300031897|Ga0318520_10739781All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria615Open in IMG/M
3300031912|Ga0306921_12108700All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium597Open in IMG/M
3300031941|Ga0310912_11395771All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium529Open in IMG/M
3300031945|Ga0310913_10198080All Organisms → cellular organisms → Bacteria1402Open in IMG/M
3300031945|Ga0310913_10430032All Organisms → cellular organisms → Bacteria937Open in IMG/M
3300031947|Ga0310909_10361172All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1219Open in IMG/M
3300031959|Ga0318530_10161816All Organisms → cellular organisms → Bacteria912Open in IMG/M
3300031981|Ga0318531_10228955All Organisms → cellular organisms → Bacteria839Open in IMG/M
3300031996|Ga0308176_11453669All Organisms → cellular organisms → Bacteria → Proteobacteria730Open in IMG/M
3300032052|Ga0318506_10165935All Organisms → cellular organisms → Bacteria969Open in IMG/M
3300032054|Ga0318570_10157289All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1018Open in IMG/M
3300032066|Ga0318514_10500949All Organisms → cellular organisms → Bacteria646Open in IMG/M
3300032076|Ga0306924_11318296All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria774Open in IMG/M
3300032076|Ga0306924_12139626All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium572Open in IMG/M
3300032180|Ga0307471_101017646Not Available995Open in IMG/M
3300032205|Ga0307472_101250026Not Available712Open in IMG/M
3300032261|Ga0306920_100248294All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium2655Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil25.74%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil15.44%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil13.24%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil7.35%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil4.41%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere4.41%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil3.68%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil3.68%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.94%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil2.21%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands1.47%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil1.47%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.47%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.47%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.47%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.74%
Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil0.74%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.74%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.74%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.74%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.74%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.74%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.74%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.74%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.74%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.74%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.74%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.74%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2228664022Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300002906Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cmEnvironmentalOpen in IMG/M
3300004009Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D2EnvironmentalOpen in IMG/M
3300004024Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D2EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004267Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBioEnvironmentalOpen in IMG/M
3300005172Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132EnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005455Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaGHost-AssociatedOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006163Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaGEnvironmentalOpen in IMG/M
3300006194Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1Host-AssociatedOpen in IMG/M
3300006846Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009524Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaGEnvironmentalOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300012984Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MGEnvironmentalOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300016270Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080EnvironmentalOpen in IMG/M
3300016294Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178EnvironmentalOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300016341Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170EnvironmentalOpen in IMG/M
3300016357Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000EnvironmentalOpen in IMG/M
3300016404Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082EnvironmentalOpen in IMG/M
3300016422Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111EnvironmentalOpen in IMG/M
3300016445Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108EnvironmentalOpen in IMG/M
3300018032Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MGEnvironmentalOpen in IMG/M
3300018067Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coexEnvironmentalOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300021444Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02EnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300025908Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026319Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)EnvironmentalOpen in IMG/M
3300027105Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF018 (SPAdes)EnvironmentalOpen in IMG/M
3300027527Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio (SPAdes)EnvironmentalOpen in IMG/M
3300027625Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027748Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)EnvironmentalOpen in IMG/M
3300027873Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028718Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194EnvironmentalOpen in IMG/M
3300028802Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_SEnvironmentalOpen in IMG/M
3300030844Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA11 EcM (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031474Fir Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031543Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20EnvironmentalOpen in IMG/M
3300031544Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26EnvironmentalOpen in IMG/M
3300031546Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23EnvironmentalOpen in IMG/M
3300031561Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26EnvironmentalOpen in IMG/M
3300031564Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21EnvironmentalOpen in IMG/M
3300031573Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111EnvironmentalOpen in IMG/M
3300031680Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22EnvironmentalOpen in IMG/M
3300031681Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20EnvironmentalOpen in IMG/M
3300031682Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22EnvironmentalOpen in IMG/M
3300031719Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)EnvironmentalOpen in IMG/M
3300031723Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23EnvironmentalOpen in IMG/M
3300031724Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20EnvironmentalOpen in IMG/M
3300031736Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21EnvironmentalOpen in IMG/M
3300031747Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22EnvironmentalOpen in IMG/M
3300031770Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17EnvironmentalOpen in IMG/M
3300031771Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19EnvironmentalOpen in IMG/M
3300031781Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20EnvironmentalOpen in IMG/M
3300031795Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19EnvironmentalOpen in IMG/M
3300031796Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24EnvironmentalOpen in IMG/M
3300031805Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23EnvironmentalOpen in IMG/M
3300031860Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25EnvironmentalOpen in IMG/M
3300031890Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)EnvironmentalOpen in IMG/M
3300031894Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18EnvironmentalOpen in IMG/M
3300031897Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300031941Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080EnvironmentalOpen in IMG/M
3300031945Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082EnvironmentalOpen in IMG/M
3300031947Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000HEnvironmentalOpen in IMG/M
3300031959Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24EnvironmentalOpen in IMG/M
3300031981Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25EnvironmentalOpen in IMG/M
3300031996Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2EnvironmentalOpen in IMG/M
3300032052Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19EnvironmentalOpen in IMG/M
3300032054Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23EnvironmentalOpen in IMG/M
3300032066Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18EnvironmentalOpen in IMG/M
3300032076Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
INPgaii200_071115122228664022SoilMMRFTLLLFMILLSGVQPLAAQQNVEARGITSVIKLEEGIFGHLAELNGKF
INPgaii200_089140212228664022SoilMEKTMRRYTLFLLVVLLGGTDRVVAQETVETRGITSVIKMDEVIFGHLTELNGKFKIRATELT
JGI25614J43888_1004184823300002906Grasslands SoilMRRFTLLLLVALLGGTXRVAAQETVETRGITSVIKIDEVIFGHLTELNGK
Ga0055437_1012727123300004009Natural And Restored WetlandsKLMEKTMMRFMLLLFVAVLSGTGRLAAQNVEARGITSMIKLEEVIFGHLTELPNWK*
Ga0055436_1001009823300004024Natural And Restored WetlandsMEKTMMRFMLLLFVAVLSGTGRLAAQNVEARGITSMIKLEEVIFGHLTELPNWK*
Ga0062590_10297826213300004157SoilMMRFTLLHLVALLVGADHLAAQETVEVRGITSVIKLEEVVYGHLTELNGKVKMRA
Ga0066396_1001078713300004267Tropical Forest SoilMERTMMRFMLLLSVALLCGTGRLAAQQAVEARGVTTAVKMEEV
Ga0066683_1035551823300005172SoilMRRFTLLMLVALLGGTVRLAAQETVETRSVTSVIKIDEVIFGHLTELNARFKLRATELTFAPDGYIGVHHHIG
Ga0066684_1088363323300005179SoilMEKTMRRFTLLLVVALLGGTDRLTAQETVETRGITSQVKIDEVIFGHLTELNGKFKLRATELT
Ga0066388_10186085423300005332Tropical Forest SoilMIRLRLLCIIALLSGVDRLAAQEKVEVRGVTSEVKIEEVTFGHLTELNDKFKMR
Ga0066388_10358430513300005332Tropical Forest SoilMEKATRYFTILLVVALLGGTGRLAAQETVETRGITSEVKIDEVIFGHLTELNGRFKLRA
Ga0066388_10413915913300005332Tropical Forest SoilMRCFTLLLLVALLGRTDRLAAQETVETRGITSEVKIEEVIFGHLTELNGKFKLR
Ga0066388_10744742413300005332Tropical Forest SoilMRITLLLLLVMTLLGGAARSVAQEKVEARGITSAVKLDEVIFSLLTELNGKFKLRATEFIFAPD
Ga0070689_10038932223300005340Switchgrass RhizosphereMMRFMLLLLVALLDGADRLAAQETVEGSGITSVIKLEEVVYGHRPELNGKFKMRATELT
Ga0070663_10059674523300005455Corn RhizosphereMMHFTLLLLVALLVGADHLAAQETVEVRGITSVIKLEEVVYGHLTELNGKVKMR
Ga0070684_10190337613300005535Corn RhizosphereMLRFTILFFLVVLGGADRSVAQEKVEARGITSTIKLEEVIFGHLTELNDKFKLRATELTFAPGGFLGIHHHVGP
Ga0066905_10013355433300005713Tropical Forest SoilMRRFTLLLLVALLSGTDRGAAQETVETRGVASVIKIDEVIFGHLTELNSKFKLRATELTFTPDGYVGVHHHVGP
Ga0066905_10071457413300005713Tropical Forest SoilMEKTMRRFTLLLLVALLGGTDRLAAQETVETRGVTSVIKIDEVIFGHLIELNGKFKLRATELTFAPDGYVGVHHHV
Ga0066903_10033813133300005764Tropical Forest SoilMRRFTLLLLVALLGGTDRGAAQETVETRGVTSLIKIDEVIFGPSD*
Ga0066903_10886393713300005764Tropical Forest SoilMMRFMLLLFVALLCGTGRLAAQQTIEARGLTSEVKMEEVTFGHLTELNGKFKLRATEMT
Ga0070715_1052650723300006163Corn, Switchgrass And Miscanthus RhizosphereMTRFTLLLLVVLLGGADRLAAQEKVEARGISSVIKLEEVTFGHLTELNGKFKMRATEFTF
Ga0075427_10000133113300006194Populus RhizosphereMVRLVLLILAFLGGADRLAAQEKVDVRGITSVIKLEETIFGHLTELNGKYK
Ga0075430_10004956163300006846Populus RhizosphereMMRITLLLLPVVALFGGADRSAAQEKVEVRGITSVIKLDEVLFGHLLS*
Ga0075425_10153141113300006854Populus RhizosphereMRRFTLLVLVALLGGTARLAAQETVETRSVTSVIKIDEIIFGHLTELNARFKLRATELTFAPDG
Ga0075424_10261406313300006904Populus RhizosphereMRRFTLLLLVALLCETDRMAAQETVETRGITSVIKIDEVIFGHLTELNG
Ga0075418_1016358813300009100Populus RhizosphereMRFTLLIFIVLLSGGHRLAAQENVEARGITSVIKLEEVIFGHLVELNGKFKLRATEVTFAPEAYL
Ga0105242_1226219323300009176Miscanthus RhizosphereMSHDSKSQVAMEKTMTRFTLLMFVALVGGSDRLAAQEKVEARGITSVIKLEEVTFGHLTELNGKFKMRATEV
Ga0105242_1303244713300009176Miscanthus RhizosphereMERTMRRFMLLLLVALLGGTARVAAQEIVETRGITSETKIDEVIYGHLTELNGKFKIRATELTFAP
Ga0105248_1194041923300009177Switchgrass RhizosphereMMRFTLLLFMALLSGANRLAAQEKVEVRGVTTEVKIEEVTFGHLSE
Ga0116225_139514423300009524Peatlands SoilMEKAMMRFTLLLFVALLGGVYPLAAQENVEARGITSVIKLEEVIYGHLEELN
Ga0126380_1109108323300010043Tropical Forest SoilMEKTMRCFTLLLLRALIGGTDRLAAQETVETRGISSEVKIEEVIFGHLT
Ga0126380_1147496713300010043Tropical Forest SoilMEKTMRCFALLLLVALLGGTNHLAAQETVETRGITSEVKIEEVTFGHLTELNGKFKLRAT
Ga0126380_1193170213300010043Tropical Forest SoilMEKAMRCFTLLLLVALLGGTERVAAQETVETRGVTSKVKIDEVIFGHLTELNGKFKLRATEV
Ga0126370_1001334313300010358Tropical Forest SoilMENTMVRFTLLLVVALLGGAGRLAAQEKIEARGITSVIKLEEVTFGH
Ga0126370_1019229913300010358Tropical Forest SoilMETAMTRFTLLLFVALLCGADRSTAQEKVEARGITSEVKLDEVTFGHLTELNGKFRMRATEFTFA
Ga0126370_1071376523300010358Tropical Forest SoilMEATMTRVTPLLLVALLSGGDRLVAQEKVEARGITAEIKLEEVTFGHLTELNGKFKM
Ga0126370_1127425623300010358Tropical Forest SoilMEKTMRRFTLLLLLALLGGTGRLAAQETVETRGITSEVKIEEVIFGHLTELYVKFNLRATETTFAPDGYVGVHHHI
Ga0126376_1012646433300010359Tropical Forest SoilMEETMRRFTVLLLAALLGGTDRLAAQETVETRGITSEVKIDEVIFGHLTEL
Ga0126372_1103773923300010360Tropical Forest SoilMEKTMRRFPLLLLVALLGGTDRVAAQETVETRGITSVIKMDEVIFGHLIELNG
Ga0126372_1189148113300010360Tropical Forest SoilMEVTMTRVTVLLLVALLSGGDRLVAQEKVEARGITAEIKLEEVTFGHLTELNGK
Ga0126378_1186974913300010361Tropical Forest SoilMEKTMRRFTLLLVVALLGGTDRLAAQETVETRGTTSEVKIEEVIFGHLTELNATFKLHAN
Ga0126377_1040528423300010362Tropical Forest SoilMERAMMHITLLLLLVVALFGRADRSVAQEKVEVRGITSVIKLDEVLFGHLHELNGKFKIRATEFTLESGAYLGVH
Ga0126379_1019033213300010366Tropical Forest SoilMERATMRITLLLLLVVALLGGAARSVAQEKVEARGITPVIKLDEVIFSHLTELNGKFKLRATEF
Ga0126381_10508958223300010376Tropical Forest SoilMEKTMRRFTLLLLVALIGGTDRLAAQEIVETRGITSEIKIDEVIFGHLTELNGKFKLRATELTFA
Ga0126383_1167815923300010398Tropical Forest SoilMEKTMRRFTLLLLVALLGGTDRVAAQENVETRGITSEVKIDEVIFGHLTELNGKFKLRATELTF
Ga0137363_1060997213300012202Vadose Zone SoilKGMEKTMRRFTLLLLVALLGGTDRVAAQETVETRGITSVLKIDEVIFGHLTELNGKFKLRLFRANS*
Ga0137376_1024030733300012208Vadose Zone SoilMEKTMKRFTLLLLVALLGGTDCVAAQETVETRGITSEVKIDEVIFGHLTELNGKFKL
Ga0137384_1102267813300012357Vadose Zone SoilMRRFTLLVLVALLGGTARLAAQETVETRSVTSVIKIDEIIFGHLTELNARFKLRATELT
Ga0137361_1007319263300012362Vadose Zone SoilMRRFTLLLLVALLGGTVRLAAQETVETRSVTSVIKIDEVIFGHLTELNGKFKLRA
Ga0137361_1044668713300012362Vadose Zone SoilMENTMRRFTLLLLVVLLDGTDRVAAQETVETRSVTSEVKIEEVIFGHLTELNGKFKL
Ga0164300_1009379933300012951SoilMEKTMKRFTLLLLVALLGGTNRMAAQETVETRGITSAIKIDEVIYGHLTELNGKFKLRATEL
Ga0164303_1020336523300012957SoilMEKTIMRFTLLIFIVLLTGGHRLAAQENVEARGITSVIKLEEVIFGHLA
Ga0126369_1010390933300012971Tropical Forest SoilMEETMRRFTLLLLVALLGGTDRLAAQETVETRGIISEVKIDEVIFGHLTEL
Ga0126369_1049524813300012971Tropical Forest SoilMEKTMRRFTLLLLVALLDGTDRGAAQETVETRGVTSLIKIDEVIFGQSD
Ga0164309_1046810113300012984SoilMGKTMRRFTLLLLVALLCETDRMAAQETVEIRGITSVIKIDEVIFGHL
Ga0132257_10145365633300015373Arabidopsis RhizosphereMRRFTLLVLVALLGGTVRLAAQETVETRSVMSVIKIDEVIFGHLTELNG
Ga0182036_1033839013300016270SoilMMRFMLLLFVALLCGTGRLAAQQTIEARGITSEVKMEEVTFGHLTELNGKFKLRAT
Ga0182036_1038564713300016270SoilMMRFMLLLFVALLCGSGRLAAQQTIEARGITSEVKMEEVTFGHLTELNGKFKLRAT
Ga0182036_1074165023300016270SoilMRHFTLLLAVALLGGTDHLAAQETVETRGITSEVKIDEVIFGHLTELNGKFKLRATE
Ga0182041_1061728433300016294SoilMMRFMLLLFVALLYGTGRLAAQQTIEARGITSEVKMEEVTFGHLTELNGKFKLRAT
Ga0182033_1033059623300016319SoilMEETMRRFTLLLLVALLGGTDRLAAQETVETRGITSEVKIEEVIFGHLTELNGKFKLRAT
Ga0182033_1081014323300016319SoilMMRFMLLLFVALLCGSGRLAAQQTIEARGITSEVKMEEVTFGYLTELNG
Ga0182033_1138081323300016319SoilMTRFTLLLMVALLIGADRLVAQEKVEARGITAEIKLEEVTFGHLTELNGKF
Ga0182035_1000480713300016341SoilMTRFTLLLFVALLCGADRSTAQEKVEARGITSEVKLDEVTFGHLTELNGKFRMRATEFTF
Ga0182035_1065222113300016341SoilMRRFTLLLLVVLLGGTDRLAAQETVETRGITSEVKIDEVIFGHLTELNGKFKLRATEI
Ga0182035_1145656013300016341SoilMKRFTLLLLVALLGETARLAAQETVETRSVTSVIKIDEVVFGHLTELNGKFKLRATE
Ga0182032_1019104913300016357SoilMRRFTLLLLVALLGGTDRGAAQETVETRGVTSEIKVDEVVFGHLAELNGKFK
Ga0182037_1099730023300016404SoilMRRFTLLLLVVLLGGTDRLAAQETVETRGITSEVKIDEVIFGHLTELNGKFKLRAT
Ga0182039_1024004333300016422SoilMEETMMRFTLLLLVALLGGADRLAAQETVETRGITSVIKIDEVIFGHLTELNGKFKL
Ga0182038_1038612023300016445SoilMEETMMRFTLLLLVALLGGADRLAAQETVETRGITSVIKIDEVIFGHLTELNGKF
Ga0187788_1040302523300018032Tropical PeatlandMMRFTLLLFVALLGGADRLVAQEKVEARGIKSEVKIEEVLFGHLTELNGKFKVRVTEFTFAPDAYL
Ga0184611_106970243300018067Groundwater SedimentMMRFMLLLLVALLDGADRLAAPETVEVRGITSVIKLEEVVYGHRPELNGKFKMRATEL
Ga0190265_1289137123300018422SoilMIRFTLLLFVALLGGVGSLAAQQNVEAQGLTSMVKLEEIISGHLT
Ga0213878_1004351433300021444Bulk SoilMRRFTLLLLVALLGGTDRVAAQETVETRGVTSEIKIDEVVFGHLTELNGKFKLRR
Ga0210402_1065223913300021478SoilMTRFTLLLLVVLLGGADRLAAQEKVEARGITSVIKLEEVTFGHLPEL
Ga0126371_1344218013300021560Tropical Forest SoilMEKTMRRFTLLLLVALLGGTDRGAAQETVETRGVTSVIKVDEVIFGHLTELNGKFKLRATELT
Ga0207643_1077014613300025908Miscanthus RhizosphereMMRFMLLLLVALLDGADRLAAQETVEGRGITSVIKLEEVVYGH
Ga0207684_1042713713300025910Corn, Switchgrass And Miscanthus RhizosphereMRRFTLLLLVALLGGTDRMAAQETVETRGITSVIKIDEVIFGHLTELNGKFKLRATELTFAP
Ga0207700_1076658213300025928Corn, Switchgrass And Miscanthus RhizosphereMTRFTLLLLVVLLGGADRLAAQEKVEARGITSVIKLEEVTFGHLTEL
Ga0207700_1129324323300025928Corn, Switchgrass And Miscanthus RhizosphereMRRFTLLLLVALLGGTDRVAAQETVETRGITSVIKIDEVIFGHLT
Ga0209647_101245973300026319Grasslands SoilMRRFTLLLLVALLGGTDRVAAQETVETRGITSVIKIDEVIFGHLTELNGKFKLRATE
Ga0207944_102598513300027105Forest SoilMRFTLLIFIVLLSGGHRLAAQENVEARGITSVIKLEEVIFGHLVELNGKFKLRATEVTFAPEAY
Ga0209684_107585113300027527Tropical Forest SoilMMRFMLLLSVALLCGTGRLAAQQAVEARGVTTAVKMEEVTFGH
Ga0208044_121841123300027625Peatlands SoilMMRFTLLLFVALLGGVYPLAAQENVEARGITSVIKLEEVIYGHLEELN
Ga0209689_121534023300027748SoilMRRFTLLLLVALLDGTDRLAAQETVETRGITSEVKIEEVIFGHLTELN
Ga0209814_10000146133300027873Populus RhizosphereMMRITLLLLPVVALFGGADRSAAQEKVEVRGITSVIKLDEVLFGHLLS
Ga0268264_1005730713300028381Switchgrass RhizosphereMMRFMLLLLVALLDGADRLAAQETVEGGGITSVIKLEEVVYGHRPELNGKF
Ga0307307_1023870323300028718SoilMEKTMMRLTLLLFIVLLSGGHRLAAQENVEARGITSVIKLEEVIFGHLAELNGSSNCAPP
Ga0307503_1066585813300028802SoilMMRFMLLLLVALLDGADRLAAQETVEVRGITSVIKLEEVVYGHLPELNGKFK
Ga0075377_1076380713300030844SoilMMRFTLLLFMALLSGANRLAAQEKVEVRGVTTEVKIEEVTFGHLSELN
Ga0170834_10583350213300031057Forest SoilMNEKALLTRFTLLLLVVLLGGAAHLAAQEKVEARGITSVVKLEEITFGHLTELNGKFKMRATEFT
Ga0170824_10816813123300031231Forest SoilMNEKALLTRFTLLLLVVLLGGAAHLAAQEKVEARGITSVVKLEEVTFGHLT
Ga0170818_10362592013300031474Forest SoilMMRFTLLLFMALLSGANRLAAQEKVEVRGVTTEVKIEEVTFGHLSELNG
Ga0318516_1060297713300031543SoilMNRFTILLLVSLLGGADRLAAQEKVEARGITSVIKLEEVTFGHLTDLNGKFKMRATEFTF
Ga0318534_1032277923300031544SoilMRRFTLLLLVALLGGSDRVAAQETVETRGITSVIKMDEVIFGHLI
Ga0318534_1082286913300031544SoilMRRFTLLLLVVLLGGTDRLAAQETVETRGITSEVKIDEVIFGHLTELNGKFKLRA
Ga0318538_1024729633300031546SoilMMRFMLLLFVALLCGTGRLAAQQTIEARGITSEVKMEEVTFGHLTELNGKFKLRA
Ga0318528_1016341113300031561SoilMMRFMLLLFVALLCGTGRLAAQQTIEARGLTSEVKMEEVTFGHLTELNGKFKLR
Ga0318573_1035366213300031564SoilMMRFMLLLFVALLCGTGRLAAQQTIEARGITSEVKMEEVTFGHLTELNGKFKLRATE
Ga0310915_1016646233300031573SoilMKRFTLLLLVALLGETARLAAQETVETRSVTSVIKIDEVVFGHLTELNGKFKLRATELTFAP
Ga0318574_1013996713300031680SoilMMRFMLLLFVALLCGTGRLAAQQTIEARGITSEVKMEEVTFGHLTELN
Ga0318572_1037540613300031681SoilMMRFMLLLFVALLCGSGRLAAQQTIEARGITSEVKMEEVTFGHLTELNGKFKLR
Ga0318560_1049083313300031682SoilMEKAMRCFTLLLVVALLGGTDRLAAQETVETRGITSEVKIEEVVFGHL
Ga0306917_1041587323300031719SoilMMRFMLLLFVALLCGTGRLAAQQTIEARGITSEVKMEEVTF
Ga0306917_1055876713300031719SoilMRRFTLLLLVVLLGGTDRLAAQETVETRGITSEVKIDEVIFGHLTELNGKFKLRATEISFAPD
Ga0318493_1049388423300031723SoilMMRFMLLLFVALLCGTGRLAAQQTIEARGITSEVKMKEV
Ga0318500_1023130623300031724SoilMRRFTLLLLVALLGGTDRGAAQETVETRGVTSEIKVDEVVFGHLAEL
Ga0318501_1023124113300031736SoilMRFMLLLFVALLCGTGRLAAQQTIEARGITSEVKMEEVTFGHLTELNGKFKLRATE
Ga0318502_1016669023300031747SoilMMRFTLLLLVALLGGADRLAAQETVETRGITSVIKIDEVIFGHLTELNGKFKLRATELTF
Ga0318521_1024396423300031770SoilMRRFTLLLLVALLGGTDRLTAQESVETRGVTSVVKLEEVIFGHLTELNGKFK
Ga0318546_1078224613300031771SoilMRRFTLLLLVVLLGGTDRLAAQETVETRGITSEVKIDEVIFGHLTELNGKFK
Ga0318547_1026727513300031781SoilMNRFTILLLVSLLGGADRLAAQEKVEARGITSAIKLEEVTFGHLTDLNGKFKMRATEFTFAPGADL
Ga0318557_1021001423300031795SoilMMRFMLLLFVALLCGTGRLAAQQTIEARGITSEVKMEEVTFGHLT
Ga0318576_1032609623300031796SoilMMRFMLLLFVALLCGTGRLAAQQTIEARGITSEVKMEEVTFGHLTELNGKFKLR
Ga0318497_1063108513300031805SoilMTRFTLLLFVALLCGADRSTAQEKVEARGITSEVKLDEVTFGHLTELN
Ga0318495_1037793513300031860SoilMMRFMLLLFVALLCGTGRLAAQQTIEARGITSEVKMEEVTFGHLTELNGKFK
Ga0306925_1079989123300031890SoilMEKTMRHFTLLLAVALLGGTDRLAAQETVETRGITSVIKIDEVIRPPD
Ga0318522_1017817923300031894SoilMMRFMLLLFVALLCGSGRLAAQQTIEARGITSEVKMEEVTFGHLTELN
Ga0318522_1036545213300031894SoilMTRFTLLLFVALLCGADRSTAQEKVEARGITSEVKLDEVTFGHLTELNGKFRMRATEFTFAPG
Ga0318520_1073978123300031897SoilMMRFMLLLFVALLCGSGRLAAQQTIEARGITSEVKMEEVTFGHLTELNGKFKLRATE
Ga0306921_1210870013300031912SoilMRHFTLLLAVALLGGTDHLAAQETVETRGITSEVKIDEVIFGHLTE
Ga0310912_1139577113300031941SoilMIRLRLLCFIALLSGVDRLAAQEKVEVRGVTSEVKIEEVIFGHLSELNDKFKMRATEFTFAPGAFL
Ga0310913_1019808033300031945SoilMRGFTLLLLMMLLGGTDRVAAQETVETRAVTSDVKIEEVIFGHLTELNGKFKLRA
Ga0310913_1043003213300031945SoilMRRFTLLLLVALLGGTDRVAAQETVETRGITSAIKIDEVIFGHL
Ga0310909_1036117213300031947SoilMRHFTLLLAVALLGGTDHLAAQETVETRGITSEVKIDEVIFGHLT
Ga0318530_1016181613300031959SoilMMRFTLLLLVALLGGADRLAAQETVETRGITSVIKIDEVIFGHLTELN
Ga0318531_1022895523300031981SoilMMRFMLLLFVALLCGSGRLAAQQTIEARGITSEVKMEEVTFGHLTELNGKFK
Ga0308176_1145366913300031996SoilMVRFTLLFFVVLLIGADRSAAQGNVEVRGITSQVKLDEVIFGHLAE
Ga0318506_1016593513300032052SoilMMRFMLLLFVALLCGSGRLAAQQTIEARGITSEVKMEEVTFGHLTELNGKFKLRA
Ga0318570_1015728923300032054SoilMMRFMLLLFVALLCGSGRLAAQQTIEARGITSEVKMEEVTFGHLT
Ga0318514_1050094913300032066SoilMRRFTLLLLVVLLGGTDRLAAQETVETRGITSVIKIDEVIFGHLTELNGKFK
Ga0306924_1131829623300032076SoilMEKKMRGFTLLLLMMLLGGTDRVAAQETVETRAVTSDVKIEEVIFGHLTELNGK
Ga0306924_1213962623300032076SoilMRGFTLLLLMMLLGGTDRVAAQETVETRAVTSDVKIEEVIFGHLTELNGK
Ga0307471_10101764613300032180Hardwood Forest SoilMRRFTLLLLVALLGGTDRVAAQETVETRGITSVIKIDEVIFGHLTELNG
Ga0307472_10125002623300032205Hardwood Forest SoilMVRFTLLLFVALLGAAGRLVAQEGVEMRGITSTVKLEEVVFGHLTELNG
Ga0306920_10024829413300032261SoilMRGFTLLLLMMLLGGTDRVAAQETVETRAVTSDVKIEEVIFGHLTELN

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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