Metagenome / Metatranscriptome Family F057718

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F057718
Family Type	Metagenome / Metatranscriptome
Number of Sequences	136
Average Sequence Length	86 residues
Representative Sequence	MRVVVTQIESDGTMWRRMVETAGRSDAGLWQELITRALAVPLPYRPAPGGPIYHLRLDDRDVMVAEHDLAGPLLDLVTAVLAKGDDV
Number of Associated Samples	109
Number of Associated Scaffolds	136

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	54.41 %
% of genes near scaffold ends (potentially truncated)	38.24 %
% of genes from short scaffolds (< 2000 bps)	83.82 %
Associated GOLD sequencing projects	104
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (62.500 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (16.912 % of family members)
Environment Ontology (ENVO)	Unclassified (27.941 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.471 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 26.09% β-sheet: 22.61% Coil/Unstructured: 51.30%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 136 Family Scaffolds
PF12697	Abhydrolase_6	2.94
PF01037	AsnC_trans_reg	2.21
PF01494	FAD_binding_3	1.47
PF13613	HTH_Tnp_4	1.47
PF01569	PAP2	0.74
PF02922	CBM_48	0.74
PF12730	ABC2_membrane_4	0.74
PF03737	RraA-like	0.74
PF03404	Mo-co_dimer	0.74
PF13006	Nterm_IS4	0.74
PF00067	p450	0.74
PF13546	DDE_5	0.74
PF09752	ABHD18	0.74
PF01022	HTH_5	0.74
PF11716	MDMPI_N	0.74
PF14117	DUF4287	0.74
PF02687	FtsX	0.74
PF13193	AMP-binding_C	0.74
PF03200	Glyco_hydro_63	0.74
PF01844	HNH	0.74
PF00300	His_Phos_1	0.74

COG ID	Name	Functional Category	% Frequency in 136 Family Scaffolds
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	2.94
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	1.47
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	1.47
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	1.47
COG0684	RNA degradosome component RraA (regulator of RNase E activity)	Translation, ribosomal structure and biogenesis [J]	0.74
COG2124	Cytochrome P450	Defense mechanisms [V]	0.74

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	62.50 %
Unclassified	root	N/A	37.50 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	62.50 %
Unclassified	root	N/A	37.50 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	62.50 %
Unclassified	root	N/A	37.50 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	54.41 %
Unclassified	root	N/A	37.50 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.74 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	53.68 %
Unclassified	root	N/A	37.50 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.74 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	53.68 %
Unclassified	root	N/A	37.50 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → environmental samples	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.50 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	36.03 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	2.21 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1.47 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.74 %
uncultured Gemmatimonadota bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → environmental samples → uncultured Gemmatimonadota bacterium	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.50 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	36.03 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	2.21 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	1.47 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.74 %
uncultured Gemmatimonadota bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → environmental samples → uncultured Gemmatimonadota bacterium	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.50 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	36.03 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	1.47 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.74 %
Hamadaea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Hamadaea	0.74 %
uncultured Gemmatimonadota bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → environmental samples → uncultured Gemmatimonadota bacterium	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.50 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	36.03 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1.47 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	0.74 %
Hamadaea flava	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Hamadaea → Hamadaea flava	0.74 %
uncultured Gemmatimonadota bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → environmental samples → uncultured Gemmatimonadota bacterium	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.50 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	36.03 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1.47 %
Streptomyces sp. cf386	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. cf386	0.74 %
Hamadaea flava	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Hamadaea → Hamadaea flava	0.74 %
uncultured Gemmatimonadota bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → environmental samples → uncultured Gemmatimonadota bacterium	0.74 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_101798569	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	909	Open in IMG/M
3300000956\|JGI10216J12902_113873463	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1472	Open in IMG/M
3300005165\|Ga0066869_10111342	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	558	Open in IMG/M
3300005172\|Ga0066683_10553870	Not Available	701	Open in IMG/M
3300005179\|Ga0066684_10859220	Not Available	595	Open in IMG/M
3300005187\|Ga0066675_10281791	Not Available	1197	Open in IMG/M
3300005332\|Ga0066388_100073738	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3737	Open in IMG/M
3300005332\|Ga0066388_100212606	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2560	Open in IMG/M
3300005338\|Ga0068868_101428525	Not Available	646	Open in IMG/M
3300005347\|Ga0070668_101927887	Not Available	544	Open in IMG/M
3300005363\|Ga0008090_14571119	Not Available	510	Open in IMG/M
3300005434\|Ga0070709_10004403	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	7595	Open in IMG/M
3300005434\|Ga0070709_10465783	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	954	Open in IMG/M
3300005435\|Ga0070714_101224454	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	732	Open in IMG/M
3300005436\|Ga0070713_100121521	All Organisms → cellular organisms → Bacteria	2291	Open in IMG/M
3300005436\|Ga0070713_101447450	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	666	Open in IMG/M
3300005437\|Ga0070710_10001396	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	11410	Open in IMG/M
3300005437\|Ga0070710_10157806	All Organisms → cellular organisms → Bacteria	1404	Open in IMG/M
3300005439\|Ga0070711_100028633	All Organisms → cellular organisms → Bacteria	3668	Open in IMG/M
3300005454\|Ga0066687_10534980	Not Available	695	Open in IMG/M
3300005457\|Ga0070662_100649272	Not Available	890	Open in IMG/M
3300005610\|Ga0070763_10150618	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1214	Open in IMG/M
3300005614\|Ga0068856_100634165	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1089	Open in IMG/M
3300005718\|Ga0068866_11053777	Not Available	580	Open in IMG/M
3300005764\|Ga0066903_100133214	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3504	Open in IMG/M
3300006032\|Ga0066696_10370639	Not Available	934	Open in IMG/M
3300006046\|Ga0066652_100056755	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	2981	Open in IMG/M
3300006163\|Ga0070715_10123150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1239	Open in IMG/M
3300006163\|Ga0070715_10590389	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	649	Open in IMG/M
3300006176\|Ga0070765_100418782	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1252	Open in IMG/M
3300006237\|Ga0097621_101311524	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	684	Open in IMG/M
3300006575\|Ga0074053_11759998	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	558	Open in IMG/M
3300006580\|Ga0074049_11682231	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	601	Open in IMG/M
3300006580\|Ga0074049_12815085	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	535	Open in IMG/M
3300006791\|Ga0066653_10075938	Not Available	1468	Open in IMG/M
3300006800\|Ga0066660_10461327	Not Available	1063	Open in IMG/M
3300006852\|Ga0075433_10505188	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1064	Open in IMG/M
3300006852\|Ga0075433_11101647	Not Available	690	Open in IMG/M
3300006854\|Ga0075425_100194271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2332	Open in IMG/M
3300006871\|Ga0075434_100515259	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1216	Open in IMG/M
3300006904\|Ga0075424_100311997	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1675	Open in IMG/M
3300006914\|Ga0075436_100009881	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6527	Open in IMG/M
3300006953\|Ga0074063_14212429	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	785	Open in IMG/M
3300006954\|Ga0079219_12068970	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	544	Open in IMG/M
3300007076\|Ga0075435_100920879	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	762	Open in IMG/M
3300009012\|Ga0066710_100936593	Not Available	1335	Open in IMG/M
3300009137\|Ga0066709_102725306	Not Available	658	Open in IMG/M
3300010043\|Ga0126380_10627698	Not Available	851	Open in IMG/M
3300010048\|Ga0126373_10416112	All Organisms → cellular organisms → Bacteria	1372	Open in IMG/M
3300010048\|Ga0126373_10518924	Not Available	1236	Open in IMG/M
3300010048\|Ga0126373_11132493	Not Available	849	Open in IMG/M
3300010048\|Ga0126373_11375352	Not Available	772	Open in IMG/M
3300010154\|Ga0127503_10388122	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	531	Open in IMG/M
3300010154\|Ga0127503_10876798	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	869	Open in IMG/M
3300010360\|Ga0126372_11198264	Not Available	783	Open in IMG/M
3300010361\|Ga0126378_10337834	All Organisms → cellular organisms → Bacteria	1614	Open in IMG/M
3300010361\|Ga0126378_10919024	All Organisms → cellular organisms → Bacteria	981	Open in IMG/M
3300010376\|Ga0126381_100169930	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2885	Open in IMG/M
3300010376\|Ga0126381_101920200	Not Available	854	Open in IMG/M
3300010396\|Ga0134126_10606062	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1252	Open in IMG/M
3300012198\|Ga0137364_10261786	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1279	Open in IMG/M
3300012198\|Ga0137364_10316308	Not Available	1161	Open in IMG/M
3300012199\|Ga0137383_11057264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	589	Open in IMG/M
3300012201\|Ga0137365_10078453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2490	Open in IMG/M
3300012201\|Ga0137365_10107668	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2097	Open in IMG/M
3300012201\|Ga0137365_10787992	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	694	Open in IMG/M
3300012207\|Ga0137381_10054804	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. cf386	3301	Open in IMG/M
3300012211\|Ga0137377_10388468	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Hamadaea → Hamadaea flava	1333	Open in IMG/M
3300012211\|Ga0137377_10687463	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	958	Open in IMG/M
3300012211\|Ga0137377_11214009	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	684	Open in IMG/M
3300012285\|Ga0137370_10043615	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2384	Open in IMG/M
3300012285\|Ga0137370_10183186	Not Available	1223	Open in IMG/M
3300012349\|Ga0137387_10042706	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2991	Open in IMG/M
3300012350\|Ga0137372_10468524	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	942	Open in IMG/M
3300012351\|Ga0137386_10059707	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2646	Open in IMG/M
3300012354\|Ga0137366_10681604	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	734	Open in IMG/M
3300012356\|Ga0137371_10203574	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1550	Open in IMG/M
3300012356\|Ga0137371_10950095	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	653	Open in IMG/M
3300012356\|Ga0137371_10985849	Not Available	639	Open in IMG/M
3300012360\|Ga0137375_10575581	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	943	Open in IMG/M
3300012948\|Ga0126375_10400512	Not Available	992	Open in IMG/M
3300012961\|Ga0164302_10144085	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1393	Open in IMG/M
3300013306\|Ga0163162_10485409	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1367	Open in IMG/M
3300014150\|Ga0134081_10226059	Not Available	645	Open in IMG/M
3300014166\|Ga0134079_10381344	Not Available	650	Open in IMG/M
3300017939\|Ga0187775_10296376	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	636	Open in IMG/M
3300017966\|Ga0187776_10009108	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5293	Open in IMG/M
3300018081\|Ga0184625_10146722	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1232	Open in IMG/M
3300018433\|Ga0066667_10446549	Not Available	1055	Open in IMG/M
3300020579\|Ga0210407_10747348	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	757	Open in IMG/M
3300020581\|Ga0210399_10358670	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1217	Open in IMG/M
3300020582\|Ga0210395_10885869	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	664	Open in IMG/M
3300021171\|Ga0210405_10666022	Not Available	806	Open in IMG/M
3300021181\|Ga0210388_11750744	Not Available	513	Open in IMG/M
3300021403\|Ga0210397_10153404	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → environmental samples → uncultured Gemmatimonadota bacterium	1612	Open in IMG/M
3300021404\|Ga0210389_10394809	All Organisms → cellular organisms → Bacteria	1088	Open in IMG/M
3300021405\|Ga0210387_10130659	Not Available	2132	Open in IMG/M
3300021405\|Ga0210387_10493587	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1088	Open in IMG/M
3300021405\|Ga0210387_11660932	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	542	Open in IMG/M
3300021475\|Ga0210392_11306338	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	543	Open in IMG/M
3300021475\|Ga0210392_11340124	Not Available	535	Open in IMG/M
3300021478\|Ga0210402_11287631	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	658	Open in IMG/M
3300021560\|Ga0126371_10131984	All Organisms → cellular organisms → Bacteria	2538	Open in IMG/M
3300021560\|Ga0126371_10223895	All Organisms → cellular organisms → Bacteria	1987	Open in IMG/M
3300025898\|Ga0207692_10113870	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1504	Open in IMG/M
3300025915\|Ga0207693_10365171	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1129	Open in IMG/M
3300025929\|Ga0207664_10379613	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1254	Open in IMG/M
3300025939\|Ga0207665_10016158	All Organisms → cellular organisms → Bacteria	4900	Open in IMG/M
3300025939\|Ga0207665_10721470	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	784	Open in IMG/M
3300025961\|Ga0207712_11606201	Not Available	583	Open in IMG/M
3300025972\|Ga0207668_11267889	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	663	Open in IMG/M
3300026300\|Ga0209027_1146010	Not Available	809	Open in IMG/M
3300026552\|Ga0209577_10713469	Not Available	566	Open in IMG/M
3300027873\|Ga0209814_10185156	Not Available	898	Open in IMG/M
3300027908\|Ga0209006_10871963	Not Available	725	Open in IMG/M
3300028784\|Ga0307282_10185335	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	993	Open in IMG/M
3300028807\|Ga0307305_10245623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	818	Open in IMG/M
3300028811\|Ga0307292_10124116	Not Available	1030	Open in IMG/M
3300028819\|Ga0307296_10282781	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	904	Open in IMG/M
3300028819\|Ga0307296_10560879	Not Available	625	Open in IMG/M
3300028884\|Ga0307308_10168079	Not Available	1050	Open in IMG/M
3300028906\|Ga0308309_10472879	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1081	Open in IMG/M
3300031469\|Ga0170819_13076871	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	529	Open in IMG/M
3300031474\|Ga0170818_103766304	Not Available	800	Open in IMG/M
3300031549\|Ga0318571_10121842	Not Available	876	Open in IMG/M
3300031640\|Ga0318555_10020548	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	3100	Open in IMG/M
3300031680\|Ga0318574_10083315	Not Available	1748	Open in IMG/M
3300031723\|Ga0318493_10216455	Not Available	1015	Open in IMG/M
3300031748\|Ga0318492_10123058	Not Available	1292	Open in IMG/M
3300031781\|Ga0318547_10871300	Not Available	562	Open in IMG/M
3300031821\|Ga0318567_10194292	Not Available	1132	Open in IMG/M
3300031831\|Ga0318564_10399856	Not Available	601	Open in IMG/M
3300032001\|Ga0306922_10312580	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1687	Open in IMG/M
3300032043\|Ga0318556_10203996	Not Available	1029	Open in IMG/M
3300032090\|Ga0318518_10062984	Not Available	1791	Open in IMG/M
3300033806\|Ga0314865_223688	Not Available	507	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	87.50%
Host-Associated	Host-Associated	12.50%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.29%
Plants	Host-Associated → Plants	12.50%
Aquatic	Environmental → Aquatic	2.21%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	85.29%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.82%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.94%
Freshwater	Environmental → Aquatic → Freshwater	1.47%
Sediment	Environmental → Aquatic → Sediment	0.74%
Roots	Host-Associated → Plants → Roots	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	66.91%
Loam	Environmental → Terrestrial → Soil → Loam	16.18%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.62%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.94%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.21%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.21%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.47%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.74%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	35.29%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	19.12%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	11.03%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.62%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.15%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.94%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.21%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.21%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.47%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.74%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.74%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.74%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.91%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	14.71%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.56%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.09%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.15%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.68%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.94%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.21%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.21%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.47%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.47%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.47%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.47%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.47%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.47%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.47%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.74%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.74%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.74%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.74%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.74%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300005165	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006575	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006580	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300033806	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_50_20	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1017985691	3300000364	Soil	VTQIESDGTMWRRMVETAGRSDAGLWQELITRALAVPLPSRPAPGGPVYHLRLDDRDVMVAEHDLAGPLLDLVTAVLAKGDPV*
JGI10216J12902_1138734632	3300000956	Soil	MRVVVTQIESDGAMSRRMVETDGRRDAGLWQELIARALAVPVPYQPVAGGPIYHLRLDDRDVMVAEPDLAGPLSDLVTAVLATDDPV*
Ga0066869_101113421	3300005165	Soil	MRVVVTQIESDGTMWRRMVQTAGRSDAGLWQELITRALAVPLPYRPAPGGPVYHLRLDDRDVMVAEHDLAGPLLDLVTAVLAKGDD
Ga0066683_105538701	3300005172	Soil	MRVVVSQIDADGTMWRRMVETAGRSDAGLWQELIARALAVPLPYRPVPGGPIYHLQMDDRDVMVAEDDRAGPLFDLVTAVLAKGDAV*
Ga0066684_108592201	3300005179	Soil	MRVVVSQIDADGTMWRRMVETAGRSDAGLWQELIARALAVPLPYRPVPGGPIYHLQMDDRDVMVADDDLAGPLFDLVTAVLAKGDAV*
Ga0066675_102817912	3300005187	Soil	MRVVVSQIDADGTMWRRMVETAGRSDAGLWQELIARALAVPLPYRPVPGGPIYHLQMDDRDVMVAEDDLAGPLFDLVTAVLAKGDAV*
Ga0066388_1000737386	3300005332	Tropical Forest Soil	VTQIESDGTMWRRMVETAGRSDAGLWQELIGRALAIPLPYRPALGVPIYHVLLDDRQVMVAEHDLAGPWFDLVTAVLAKGDALERS*
Ga0066388_1002126063	3300005332	Tropical Forest Soil	VTQIESDGTVWRRMVETAGRGDAGLWRELITHALAVPLPYRPAPGGPIYHLRLDERDVMVSEHDLAGPLLDLVTAVLAKGDDV*
Ga0068868_1014285251	3300005338	Miscanthus Rhizosphere	MRVVVSQIDADGTMWRRMVETAGRSDAGLWQELIARALAVPSPYRPVPGGPIYHLQMDDRDVMVAEDDLAGPLFDLVTAVLAKGDAV*
Ga0070668_1019278871	3300005347	Switchgrass Rhizosphere	MRVVVSQIDADGTMWRRMVETAGRSDAGLWQELIARALAVPSPYRPVPGGPIYHLQMDDRDVMVAEDDLAGPLFDLVTAV
Ga0008090_145711191	3300005363	Tropical Rainforest Soil	VTQIESDGTMWRRMVETAGRSDAGLWQELIGRALAIPLPYRPALGVPIYHVLLDDRQVMVAEHDLAGPWFDLVTAVLAKGDALEGS*
Ga0070709_100044034	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VTQIESDGTMWRRMVETAGRSDAGLWQELIGRALAFPLPYRPAPGVPIYHVLLEDREIMVAEHDLAGPWSDLVTAVLAKGDAL*
Ga0070709_104657832	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VTQIESDGTMWRRMVQTTGRSDAGLWQELITRALAGPLPYRPTPGGPVYHLRLDDRDVMVAEHDLAGPLLDLVTAVLAKGDDV*
Ga0070714_1012244542	3300005435	Agricultural Soil	ARRAQAQTGLMRVVVTQIESDGTMWRRMVETAGRSDAGLWQELITRALAVPLPYRPAPGGPIYHLRLDDRDVMVAEHDLAGPLLDLVTAVLAKGDDV*
Ga0070713_1001215213	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VTQIESDGTMWRRMVETAGRSDAGLWQELITRALAVPLPYRPAPGGPVYHLRLDDRDVMVAEHDLAGPLLDLVTAVLAKGDDV*
Ga0070713_1014474502	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	RRAQAQTGLMRVVVTQIESDGTMWRRMVVETAGRSDAGLWQELITRALAVPLPYRPAPGGPIYHLRLDDRDVMVAEHHLARPLLDLVTAVLAKGDDV*
Ga0070710_100013963	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MRVVVTQIESDGTMWRRMVETAGRSDAGLWQELIGRALAFPLPYRPAPGVPIYHVLLEDREIMVAEHDLAGPWSDLVTAVLAKGDAL*
Ga0070710_101578062	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MRVVVTQIESDGTMWRRMVVETAGRSDAGLWQELITRALAVPLPYRPAPGGPIYHLRLDDRDVMVAEHHLARPLLDLVTAVLAKGDDV*
Ga0070711_1000286334	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VTQIESDGTMWRRMVETAGRSDAGLWQELIGRALAFPLPYRPAPGVPIYHVLLEDREIMVAEHDLAGPWSDLVTAVLAKGDVL*
Ga0066687_105349802	3300005454	Soil	TMWRRVVETAGRSDAGLWLELIGRALAIPLPYRPDPGVPIYHVLLDDREVMIAEHDLDGPWSDLLTAILAKGDAL*
Ga0070662_1006492721	3300005457	Corn Rhizosphere	RRMVETAGRSDAGLWQELIARALAVPSPYRPVPGGPIYHLQMDDRDVMVAEDDLAGPLFDLVTAVLAKGDAV*
Ga0070763_101506181	3300005610	Soil	MRVVVTQIESDGTMWRRMVETAGRSDAGLWQELIGRALAFPLPYRPAPGVPIYHVLLEDREIMVAEHDLAGPWSDLVTAVLAKGDVL*
Ga0068856_1006341651	3300005614	Corn Rhizosphere	VSQIDADGTMWRRMVETAGRSDAGLWQELIARALAVPSPYRPVPGGPIYHLQMDDRDVMVAEDDLAGPLFDLVT
Ga0068866_110537773	3300005718	Miscanthus Rhizosphere	MWRRMVETAGRSDAGLWQELIARALAVPSPYRPVPGGPIYHLQMDDRDVMVAEDDLAGPLFDLVTAVLAKGDAV*
Ga0066903_1001332143	3300005764	Tropical Forest Soil	VTQIESDGTMWRRLVETAGRSDAGLWQELIGRALAIPLPYRPAPGVPIYHVLLDDRQVMVAEHDLAGPWFDLVTAVLAKGDALDGS*
Ga0066696_103706392	3300006032	Soil	QAQTGLMRVVVSQIDADGTMWRRMVETAGRSDAGLWQELIARALAVPLPYRPVPGGPIYHLQMDDRDVMVADDDLAGPLFDLVTAVLAKGDAV*
Ga0066652_1000567553	3300006046	Soil	VSQIDADGTMWRRMVETAGRSDAGLWQELIARALAVPLPYRPVPGGPIYHLQMDDRDVMVADDDLAGPLFDLVTAVLAKGDAV*
Ga0070715_101231503	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	RVVVTQIESDGTMWRRMVETAGRSDAGLWQELIGRALAFPLPYRPAPGVPIYHVLLEDREIMVAEHDLAGPWSDLVTAVLAKGDAL*
Ga0070715_105903892	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MRVVVTQIESDGTMWRQMVETAGRSDAGLWQELITRALAVPLPYRPAPGGPVYHLRLDDRDVMVAEHDLAGPLLDLVTAVLAKGDDV*
Ga0070765_1004187823	3300006176	Soil	DGTMWRRMVETAGRSDAGLWQELIGRALAFPLPYRPAPGVPIYHVLLEDREIMVAEHDLAGPWSDLVTAVLAKGDVL*
Ga0097621_1013115242	3300006237	Miscanthus Rhizosphere	MRVVVTQIESDGTMWRRMVETAGRSDAGLWQELITRALAVPLPYRPAPGGPIYHLRLDDRDVMVAEHDLAGPLLDLVTAVLAKGDDV*
Ga0074053_117599981	3300006575	Soil	MRVVVTQIESDGTMWRRMVETAGRSDAGLWQELITRALAVPLPYRPAPGGPVYHLRLDDRDVMVAEHDLAGPLLDLVTAVLAKGDDV*
Ga0074049_116822312	3300006580	Soil	MRVVVTQIESDGTINRRMVDTAGRSDASQWEELVARARAVPLPYRPTPGGAIYHLRGEDWDVMVAEHDLAGPLLDLVTAVLAEGEAP*
Ga0074049_128150851	3300006580	Soil	VTQIESDGTMWRRMVETAGRSDAGLWQELITRALAVPLPYRPAPGGPVYHLRLDDRDVMVADHDLAGPLLDLVTAVLAKGDDV*
Ga0066653_100759383	3300006791	Soil	VRCRPVCAAQTGLMRVVVSQIEADGTMWRRMVETAGRSDAGLWQELIARALAVPLPYRPVPGGPIYHLQMDDRDVMVADDDLAGPLFDLVTAVLAKGDAV*
Ga0066660_104613272	3300006800	Soil	MRAVVTQIESDGTMWRRVVETAGRSDAGLWLGLIGRALAIPLPYRPDPGVPIYHVLLDDREVMIAEHDLDGPWSDLLTAILAKGDAL*
Ga0075433_105051881	3300006852	Populus Rhizosphere	MWRRMVETAGRSDAGLWQELITRALAVPLPYRPAPGGPIYHLRLDDRDVMVAEHDLAGPLLDLVTAVLAKGDDV*
Ga0075433_111016472	3300006852	Populus Rhizosphere	QAQTGLMRVVVSQIDADGTMWRRMVETAGRSDAGLWQELIARALAVPLPYRPVPGGPIYHLQMDDRDVMVAEDDLAGPLFDLVTAVLAKGDAV*
Ga0075425_1001942713	3300006854	Populus Rhizosphere	VSQIDADGTMWRRMVETAGRSDAGLWQELIARALAVPLPYRPVPGGPIYHLQMDDRDVMVAEDDLAGPLFDLVTAVLAKGD
Ga0075434_1005152591	3300006871	Populus Rhizosphere	GLMRVVVTQIESDGTMWRRMVETAGRSDAGLWQELITRALAVPLPYRPAPGGPVYHLRLDDRDVMVAEHDLAGPLLDLVTAVLAKGDDV*
Ga0075424_1003119971	3300006904	Populus Rhizosphere	AQTGLMRVVVTQIESDGTMWRRMVETAGRSDAGLWQELITRALAVPLPYRPAPGGPVYHLRLDDRDVMVAEHDLAGPLLDLVTAVLAKGDDV*
Ga0075436_1000098816	3300006914	Populus Rhizosphere	VSQIDADGTMWRRMVETAGRSDAGLWQELIARALAVPLPYRPVPGGPIYHLQMDDRDVMVAEDDLAGPLFDLVTAVLAKGDAV*
Ga0074063_142124292	3300006953	Soil	TMWRRMVQTAGRSDAGLWQELITRALAVPLPYRPAPGGPVYHLRLDDRDVMVAEHDLAGPLLNLVTAVLAKGDDV*
Ga0079219_120689701	3300006954	Agricultural Soil	WRRMVETAGRSDAGLWQELITRALAVPLPYRPAPGGPIYHLRLDDRDVMVAEHDLAGPLLDLVTAVLAKGDDV*
Ga0075435_1009208791	3300007076	Populus Rhizosphere	VTQIESDGTMWRRMVETAGRSDAGLWQELITRALAVPLPYRPAPGGPIYHLRLDDRDVMVAEHDLAGPLLDLVTAVLAKGDDV*
Ga0066710_1009365932	3300009012	Grasslands Soil	MWRRMVETAGRSDAGLWQELITRALAVPLPYRPAPDGPIYHLRLDERDVTVAGHDLAGPLLDLVTAVLARQGR
Ga0066709_1027253061	3300009137	Grasslands Soil	MWRRMVETAGRSDAGLWQELITRALAVPLPYRPAPDGPIYHLRLDERDVTVAEHDLAGPLLDLVTAVLARQGR*
Ga0126380_106276981	3300010043	Tropical Forest Soil	MRVVVSRIDSDGTMQRRMVETAGRSDAGLWQELVARALAGPVPYRPVPGDPLYHLRLDDRDVMIAEPDLAGPLFDLVTAVLAKGDPV*
Ga0126373_104161123	3300010048	Tropical Forest Soil	MRVVVTQIEADGTMWRRMVETAGRSDAGLWQELIGRALAIPLPYRPDFGVPIYHLLLDDREVMVAEHDLAGPWFDLVTAVLAKGDAL*
Ga0126373_105189242	3300010048	Tropical Forest Soil	MRVVVTQIESDGAMWRRMVETAGRSDAGLWQELIGRALAIPLPYRPTPGVPVYHLLLDDREIMVAEDDLDGPWFDLVTAVLAKGDVL*
Ga0126373_111324932	3300010048	Tropical Forest Soil	MRVVVTQIESDGTMWRRMVETAGRSDAGLWQELIGRALAIPLPYRPAPGAPVYHVLLDDRDVMIAEHDLTGPWFDLVTAVLAKGDPL*
Ga0126373_113753522	3300010048	Tropical Forest Soil	MRVVVTQIESDGTMWRRLVETAGRSDAGLWQELIGRALAIPLPYRPAPGVPIYHVLLDDRQVMVAEHDLAGPWFDLVTAVLAKGDALDGS*
Ga0127503_103881221	3300010154	Soil	QIESDGTMWRRMVETAGRSDAGLWQELITRALAVPLPYRPAPGGPVYHLRLDDRDVMVAEHDLAGPLLDLVTAVLAKGDDV*
Ga0127503_108767981	3300010154	Soil	QIESDGTMWRRMVETAGRSDAGLWQELITRALAVPLPYRPAPGGPVYHLRLDDRDVMVAEHDLAGPLLNLVTAVLAKGDDV*
Ga0126372_111982641	3300010360	Tropical Forest Soil	MRVVVSRIDSDGTMQRRMVETAGRSDAGLWQELVARALADPVPYQPVPGGPLYHLRLDDRDVMIAEPDLAGPLFDLVTAVLAKGDPV*
Ga0126378_103378341	3300010361	Tropical Forest Soil	MRVVVTQIESDGTMWRRTVETAGRSDAGLWQQLIGRALAIPLPYRPALCVPIYHVLLDDRQVMVAEHDLAGPWFDLVTAVLAKGDAL*
Ga0126378_109190241	3300010361	Tropical Forest Soil	MRVVVTQIESDGAMWRRMVETAGRSDAGLWQELIGRALAIPLPYRPTPGVPVYHLLLDDREIMVAEDDLDGPWFDLVTAVLAKGDALDGS*
Ga0126381_1001699305	3300010376	Tropical Forest Soil	MRVVVTQIESDGTMWRRMVETAARSDAGLWQELIGRALAIPLPYRPAPGAPVYHVLLDDRDVMIAEHDLTGPWFDLVTAVLAKGDPL*
Ga0126381_1019202002	3300010376	Tropical Forest Soil	MRVVVTQIESDGTMWRRMVETDGRSDAGLWQELIGRALIIPLPYRPAPGVPIYHLLLDDREVMVAEHDLAGPWFDLVTAVLAKGDAL*
Ga0134126_106060624	3300010396	Terrestrial Soil	GLMRVVVTQIESDGTMWRRMVDTAGRSDAGLWQELITRALAVPLPYRPAPGGPIYHLRLDDRDVMVAEHDLAGPLLDLVTAVLAKGDDV*
Ga0137364_102617862	3300012198	Vadose Zone Soil	MRVVVTQIESDGTMWRRMVETAGHSDAALWQELITRALAVPLPYRPAPGGPIYHLRLDDRDVMVAEHDLAGPLLDLVTAVLAKGDPV*
Ga0137364_103163082	3300012198	Vadose Zone Soil	MRAVVTQIESDGTMWRRVVETAGRSDAGLWLELIGRALAIPLPYRPDPGVPIYHVLLDDREVMIAEHDLDGPWSDLLTAILAKGDAL*
Ga0137383_110572641	3300012199	Vadose Zone Soil	MRVVVTQIGSDGTIKRRMVDTAGRSDAFQWDELVARALAVPLPYRPARGGAICHLRGDDFDVMVAEHDLAGPLLDLVTAVLAEGEAP*
Ga0137365_100784531	3300012201	Vadose Zone Soil	MRVVVSQIDADGTMWRRMVETAGRSDVGLWQELIARALAVPLPYRPVPGGPIYHLRIDDRYVVVAEDDLAGPLFDLVTAVLAKGDAV*
Ga0137365_101076684	3300012201	Vadose Zone Soil	MRVVVSQIEADGTMWRRMVETAGRSDVGLWQELIARALAVPLPYRPVPGGPIYHLRMDDRDVMVAEDDLTGPLFDLVTAVLAKGDAV*
Ga0137365_107879921	3300012201	Vadose Zone Soil	MRVVVTQIGSDGTIKRRMVDTAGRSDAFQWDELVARALAVPLPYRPARGGAICHLRGDDFDVMVAEHDLAGRCWTW*
Ga0137381_100548041	3300012207	Vadose Zone Soil	MRVVVTQIGSDGTINRRMVDTAGRSDAFQWEELITRALAVSLPYRPAPGGAIYHLRVDDQDVMVAEHDLAGPLLDLVTAVLAEGEAP*
Ga0137377_103884682	3300012211	Vadose Zone Soil	MRVVVTQIESDGTMWRRMVETAGRSDAALWQELITRALAVPLPYRPAPGGLIYHLRLDERDVMVAEHDLAGPLLDLVTAVLAKGDPV*
Ga0137377_106874632	3300012211	Vadose Zone Soil	AQAQTGLMRVVVTQIESDGTMWRRMVETAGRGDAGLWQELITRALAVPLPYRPAPGGPVYHLRLDDRDVMVAEHDLAGPLLDLVTAVLAKGDDV*
Ga0137377_112140092	3300012211	Vadose Zone Soil	MRVVVTQIGSGGTIKRRMVDTAGRSDAFQWDELVARALAVPLPYRPARGGAICHLRGDDFDVMVAEHDLAGPLLDLVTAVLAEGEAP*
Ga0137370_100436151	3300012285	Vadose Zone Soil	MRVVVTQIESDGTMWRRMVETAGHSDAALWQELITRALAVPLPYRPAPGGLIYHLRLDDRDVMVAEHDLAGPLLDLVTAVLAKGDPV*
Ga0137370_101831863	3300012285	Vadose Zone Soil	VLMRAVVTQIESDGTMWRRVVETAGRSDAGLWLELIGRALAIPLPYRPDPGVPIYHVLLDDREVMIAEHDLDGPWSDLVTAILAKGDAL*
Ga0137387_100427062	3300012349	Vadose Zone Soil	MRVVVTQIGSDGTMNRRMVDTAGRSDAFQWEELITRALAVSLPYRPAPGGAIYHLRVDDQDVMVAEHDLAGPLLDLVTAVLAEGEAP*
Ga0137372_104685242	3300012350	Vadose Zone Soil	MRVVVTQIGSGGTIKRRVVDAAGRSDAFQWEELVARALAVPLPYRPAPGGAIYHLRVGDRDLTVAEYDLAGPLRELVTAVMA*
Ga0137386_100597071	3300012351	Vadose Zone Soil	MRVVVTQIGSDGTIKRRMVDTAGRSGAFQWEELITRALAVSLPYRPAPGGAIYHLRVDDQDVMVAEHDLAGPLLDLVTAVLAEGEAP*
Ga0137366_106816041	3300012354	Vadose Zone Soil	MRVVVTQIESDGTIKCRMVDTAGRSDAFQWEELVARALAVPLPYRPAPGGAIYHLRVDDRDVMVAEHDLAGPLLDLVTTVLAEGEAP*
Ga0137371_102035742	3300012356	Vadose Zone Soil	AQAQTGLMRVVVTQIESDGTMWRRMVETAGHSDAALWQELITRALAVPLPYRPAPGGPIYHLRLDDRDVMVAEHDLAGPLLDLVTAVLAKGDPV*
Ga0137371_109500951	3300012356	Vadose Zone Soil	TGLMRVVVSQIEADGTMWRRMVETAGRSDVGLWQELIARALAVPLPYRPVPGGPIYHLRMDDRDVMVAEDDLTGPLFDLVTAVLAKGDAV*
Ga0137371_109858491	3300012356	Vadose Zone Soil	AQAQTGLMRVVVTQIESDGTMWRRMVETAGRSDAGLWQELITRALAVPLQYRPAPSGPVYHLRLDDRDVMVAEHDLAGPLLDLVTAVLAKGDDV*
Ga0137375_105755811	3300012360	Vadose Zone Soil	MRVVVTQIESDGSIRRRMVDTAGRSDAFQWEELVEGALAVPLPYRPAPGGAIYHLRVGDRDLTVAEYDLAGPLRELVTA
Ga0126375_104005121	3300012948	Tropical Forest Soil	MRVVVSRIDSDGTMQRRMVETAGRSDAGLWQELVARALAGPVLYRPVPGGPLYHLRLDDRDVMIAEPDLAGPLFDLVTAVLAKGDPV*
Ga0164302_101440853	3300012961	Soil	MRVVVTQIESDGTLWRRMVETAGRSDAGLWQELITRALAVPLPYRPAPGGPIYHLRLDDRDVMVAEHDLAGPLLDLVTAVLAKGDDV*
Ga0163162_104854092	3300013306	Switchgrass Rhizosphere	MRVVVSQIDADGTMWRRMVETAGRSDAGLWQELIPRALSVPLPYRPAPGGPVYHLRLDDRDVMVAQHHLARPLLDLVTAVLAKGDDV*
Ga0134081_102260591	3300014150	Grasslands Soil	MWRRMVETAGRSDAGLWQELIARALAVPLPYRPVPGGPIYHLQMDDRDVMVADDDLAGPLFDLVTAVLAKGDAV*
Ga0134079_103813441	3300014166	Grasslands Soil	MRVVVSQIDADGTMWRRMVETAGRSDAGLWQELIARALAVPLPYRPVPGGPIYHLQMDDRDVMVADDDLAGPLFDLVTAVLAKGDAG*
Ga0187775_102963762	3300017939	Tropical Peatland	VETAGRSDAGLWQELITRALAVPLPYRPAPGGPIYHLRLDDRDVMVAEHDLAGPLLDLVTAVLAKGDDV
Ga0187776_100091082	3300017966	Tropical Peatland	MRVVVTQIESDGTMWRRMVETAGRSDAGLWQELITRALAVPLPYRPAPGGPIYHLRLDDRDVMVAEHDLAGPLLDLVTAVLAKGDDV
Ga0184625_101467221	3300018081	Groundwater Sediment	VSQIEADGTMWRRMVETAGRSDVGLWQELIARALAVPLPYRPVPGGPIYHLRIDDRYVVVAEDDLAGPLFDLVTAVLAKGD
Ga0066667_104465492	3300018433	Grasslands Soil	VSQIDADGTMWRRMVETAGRSDAGLWQELIARALAVPLPYRPVPGGPIYHLQMDDRDVMVADDDLAGPLFDLVTAVLAKGDAV
Ga0210407_107473481	3300020579	Soil	MRVVVTQIESDGTMWRRMVETAGRSDAGLWQELIGRALAFPLPYRPAPGVPIYHVLLEDREIMVAEHDLAGPWSDLVTAVLAKGDVL
Ga0210399_103586701	3300020581	Soil	VTQIESDGTMWRRMVETAGRSDAGLWQELIGRALAFPLPYRPAPGVPIYHVLLEDREIMVAEHDLAGPWSDLVTAVLAKGDVL
Ga0210395_108858692	3300020582	Soil	MRVVVTQIESDGTMWRRMVETAGRSDAGLWQELIGRALAFPLPYRPAPGVPIYHVLLEDREIMVAEHDLTGPWSDLVTAVLAKGDAL
Ga0210405_106660221	3300021171	Soil	VTRIESDGTMWRRMVETAGRGDAGLWQGLIGRALAIPLAYRPAPGVPVYQLLLDDREVMVAEHDLAGPWFDLVTAVLAKGDAL
Ga0210388_117507441	3300021181	Soil	PAVLTAAAPSLEFGPAGASTLPALPSQAHTVFMRVVVTRIESDGTMWRRMVETAGRGDAGLWQGLIGRALAIPLPYRPAPGVPVYQLLLDDREVMVAEHDLAGPWFDLVTAVLAKGDALERS
Ga0210397_101534041	3300021403	Soil	VTRIESDGTMWRRMVETAGRGDAGLWQGLIGRALAIPLAYRPAPGVPVYQLLLDDREVMVAEHDLDGPWFDLVTAVLAKGDAL
Ga0210389_103948093	3300021404	Soil	VTRIESDGTMWRRMVETAGRGDAGLWQELIGRALAIPLPYRPAPGVPVYQLLLDDREVMVAEHDLDGPWFDLVTAVLAKGDAL
Ga0210387_101306593	3300021405	Soil	SDGTMWRRMVETAGRGDAGLWQELIGRALAIPLPYRPAPGVPIYQLVLDDREVMVAEHDLAGPWFDLVTAVLAKGDALERS
Ga0210387_104935871	3300021405	Soil	PALPAQAHTVFMRVVVTRIESDGTMWRRMVETAGRGDAGLWQGLIGRALAIPLPYRPAPGVPVYQLLLDDREVMVAEHDLDGPWFDLVTAVLAKGDAL
Ga0210387_116609321	3300021405	Soil	YRVCRGQAQTGLMRVVVTQIESDGTMWRRMVETAGRSDAGLWQELIGRALAFPLPYRPAPGVPIYHVLLEDREIMVAEHDLAGPWSDLVTAVLAKGDVL
Ga0210392_113063381	3300021475	Soil	TGLMRVVVTQIESDGTMWRRMVETAGRSDAGLWQELIGRALAFPLPYRPAPGVPIYHVLLEDREIMVAEHDLAGPWSDLVTAVLAKGDAL
Ga0210392_113401242	3300021475	Soil	VTRIESDGTMWRRMVETAGRGDAGLWQGLIGRALAIPLPYRPAPGVPVYQLLLDDREVMVAEHDLDGPWFDLVTAVLAK
Ga0210402_112876312	3300021478	Soil	QIESDGTMWRRMVQTAGRSDAGLWQELITRALAVPLPYRPAPGGPVYHLRLDDRDVMVAEHDLAGPLLDLVTAVLAKGDDV
Ga0126371_101319844	3300021560	Tropical Forest Soil	VTQIEADGTMWRRMVETAGRSDAGLWQELIGRALAIPLPYRPDFGVPIYHLLVDDREVMVAEHDLAGPWFDLVTAVLAKGDAL
Ga0126371_102238952	3300021560	Tropical Forest Soil	MRVVVTQIESDGTMWRRLVETAGRSDAGLWQELIGRALAIPLPYRPAPGVPIYHVLLDDRQVMVAEHDLAGPWFDLVTAVLAKGDALDGS
Ga0207692_101138701	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MRVVVTQIESDGTMWRRMVETAGRSDAGLWQELIGRALAFPLPYRPAPGVPIYHVLLEDREIMVAEHDLAGPWSDLVTAVLAKGDAL
Ga0207693_103651711	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MRVVVTQIGSDGTIERRMVDTAGRGDAFQWEDLITRALAVPLPYRPAPGGAVYHLRVDDRDVMVAEHDLAGPLLGLVTAVLAEGGAP
Ga0207664_103796132	3300025929	Agricultural Soil	MRVVVTQIGSDGTIERRTVDTAGRGDAFQWEDLITRALAVPLPYRPAPGGAVYHLRVDDWDVMVAEHDLAGPLLGLVTAVLAEGEAP
Ga0207665_100161583	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MRVVVTQIESDGTMWRRMVETAGRSDAGLWQELITRALAVPLPYRPAPGGPVYHLRLDDRDVMVAEHDLAGPLLDLVTAVLAKGDDV
Ga0207665_107214702	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MRVVVSQIDADGTMWRRMVETAGRSDAGLWQELIARALAVPSPYRPVPGGPIYHLQMDDRDVMVAEDDLAGPLFDLVTAVLAKGDAV
Ga0207712_116062011	3300025961	Switchgrass Rhizosphere	SWSPKAAAQHVQAQTGLMRVVVSQIDADGTMWRRMVETAGRSDAGLWQELIARALAVPSPYRPVPGGPIYHLQMDDRDVMVAEDDLAGPLFDLVTAVLAKGDAV
Ga0207668_112678891	3300025972	Switchgrass Rhizosphere	MRVVVSQIDADGTMWRRMVETAGRSDAGLWQELIARALAVPSPYRPVPGGPIYHLQMDDRDVMVAEDDLAGPLFDLVTAVLAKG
Ga0209027_11460101	3300026300	Grasslands Soil	ACAAQTGLMRVVVSQIDADGTMWRRMVETAGRSDAGLWQELIARALAVPLPYRPVPGGPIYHLQMDDRDVMVADDDLAGPLFDLVTAVLAKGDAV
Ga0209577_107134691	3300026552	Soil	GSDAGLWLELIGRALAIPLPYRPDPGVPIYHVLLDDREVMIAEHDLDGPWSDLLTAILAKGDAL
Ga0209814_101851562	3300027873	Populus Rhizosphere	MRVVVSQIDADGTMWRRMVETAGRSDAGLWQELIARALAVPLPYRPVPGGPIYHLQMDDRDVMVAEDDLAGPLFDLVTAVLAKGDAV
Ga0209006_108719631	3300027908	Forest Soil	VTRIESDGTVWRRMVETAGRGDAGLWQGLIGRALAIPLPYRPAPGVPIYQLVLDDREVMVAEHDLAGPWFDLVTAVLAKGDAL
Ga0307282_101853352	3300028784	Soil	MRVVVSQIDADGTMWRRMVETAGRSDAGLWQELIARALAVPLPYRPVPGGPIYHLQMDDRDVMVAEDDLAGPLFDLVTAVLAKGDEV
Ga0307305_102456231	3300028807	Soil	VSQIDADGTMWRRMVETAGRSDAGLWQELIARALAVPLPYRPVPGGPIYHLQMDDRDVMVAEDDLAGPLFDLVTAVLAKGDAV
Ga0307292_101241162	3300028811	Soil	VQAQTGLMRVVVSQIDADGTMWRRMVETAGRSDAGLWQELIARALAVPLPYRPVPGGPIYHLQMDDRDVMVAEDDLAGPLFDLVTAVLAKGDEV
Ga0307296_102827811	3300028819	Soil	VSQIEADGTMWRRMVETAGRSDVGLWQELIARALAVPLPYRPVPGGPIYHLRIDDRYVVVAEDDLAGPLFDLVTAVLAKGDAV
Ga0307296_105608791	3300028819	Soil	DADGTMWRRMVETAGRSDAGLWQELIARALAVPLPYRPVPGGPIYHLQMDDRDVMVAEDDLAGPLFDLVTAVLAKGDAV
Ga0307308_101680792	3300028884	Soil	VTQIESDGTMWRRMVETAGRSDAGLWQELITRALAVPLPYRPAPGGPVYHLRLGDRDVMVAEHDLAGPLLDLVTAVLAKGDDV
Ga0308309_104728792	3300028906	Soil	ESDGTMWRRMVETAGRSDASLWQELIGRALAFPLPYRPAPGVPIYHVLLEDREIMVAEHDLAGPWSDLVTAVLAKGDVL
Ga0170819_130768711	3300031469	Forest Soil	SGCPAGSARRAQAQTGLMRVVVTQIESDGTMWRRMVETAGRSDAGLWQELITRALAVPLPYRPAPGGPVYHLRLDDRDVMVAEHDLAGPLLDLVTAVLAKGDDV
Ga0170818_1037663041	3300031474	Forest Soil	MAGREQSARWAPDDVRAQTGLMRVVVTQIESDGTMWRRMVETAGRSDAGLWQELITRALAVPLPYRPAPGGPVYHLRLGDQDVMVAEHDLAGPLLDLVTAVLAKGDDV
Ga0318571_101218421	3300031549	Soil	VTQIESDGTMQRRAVETAGRSDAGLWQELIARAFAAPVPYRPVSGGPLYHLRLDDREVMVAEPDLAGPLFDLVTAVLAKGEPL
Ga0318555_100205485	3300031640	Soil	VTQIESDGTMRRRVVETAGRRDAGLWQELIARAFAAPVPYRPVSGGPLYHLRLDDREVMVAEPDLAGPLFDLVTAVLAKGDPV
Ga0318574_100833153	3300031680	Soil	MRVVVTQIESDGTMRRRVVETAGRRDAGLWQELIARAFAAPVPYRPVSGGPLYHLRLDDREVMVAEPDLAGPLFDLVTAVLAKGDPV
Ga0318493_102164551	3300031723	Soil	PDGSGVPTGSSDHAQVQTGLMRVVVTQIESDGTMRRRVVETAGRRDAGLWQELIARAFAAPVPYRPVSGGPLYHLRLDDREVMVAEPDLAGPLFDLVTAVLAKGDPV
Ga0318492_101230583	3300031748	Soil	GAECPPVSPDHARVQTGLMRVVVTQIESDGTMRRRVVETAGRRDAGLWQELIARAFAAPVPYRPVSGGPLYHLRLDDREVMVAEPDLAGPLFDLVTAVLAKGDPV
Ga0318547_108713001	3300031781	Soil	VQTGLMRVVVTQIESDGTMQRRAVETAGRSDAGLWQELIARAFAAPVPYRPVSGGPLYHLRLDDREVMVAEPDLAGPLFDLVTAVLAKGDPV
Ga0318567_101942922	3300031821	Soil	VVETAGRSDAGLWQELIARAFAAPVPYRPVSGGPLYHLRLDDREVMVAEPDLAGPLFDLVTAVLAKGDPV
Ga0318564_103998561	3300031831	Soil	MRVVVTQIESDGTMQRRAVETAGRSDAGLWQELIARAFAAPVPYRPVSGGPLYHLRLDDREVMVAEPDLAGPLFDLVTAVLAKGEPL
Ga0306922_103125802	3300032001	Soil	MRVVVTQIESDGTMQRRAVETAGRSDAGLWQELIARAFAAPVPYRPVSGGPLYHLRLDDREVMVAEPDLAGPLFDLVTAVLAKGDPV
Ga0318556_102039962	3300032043	Soil	MRVVVTQIESDGTMRRRVVETAGRRDAGLWQELIARAFAAPVPYRPVSGGPLYHLRLDDREVMVAEPDLAGPLFDLVTAVLAKGEPL
Ga0318518_100629844	3300032090	Soil	VQTGLMRVVVTQIESDGTMRRRVVETAGRRDAGLWQELIARAFAAPVPYRPVSGGPLYHLRLDDREVMVAEPDLAGPLFDLVTAVLAKGDPV
Ga0314865_223688_153_416	3300033806	Peatland	MRVVVTRIEWDGTMRRRMVETAGRGDAGRWQVLIARALAFPLPYRPAPRGPIYHLRVGEQDVLVADHDLSGPMSDLMTAVLALGEAL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F057718

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences