Metagenome / Metatranscriptome Family F057921

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Overview

Basic Information
Family ID	F057921
Family Type	Metagenome / Metatranscriptome
Number of Sequences	135
Average Sequence Length	46 residues
Representative Sequence	VTRQAACSPTGMHGQNVASGDGVTLSPLLPAAGFARLRIDALVRVR
Number of Associated Samples	114
Number of Associated Scaffolds	135

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	100.00 %
Associated GOLD sequencing projects	109
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (98.519 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil (41.481 % of family members)
Environment Ontology (ENVO)	Unclassified (41.481 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (59.259 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 30.43% Coil/Unstructured: 69.57%
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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.52 %
All Organisms	root	All Organisms	1.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.52 %
cellular organisms	root	All Organisms → cellular organisms	1.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.52 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.52 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.74 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.52 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.74 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.74 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003575\|Ga0007409J51694_1036488	Not Available	587	Open in IMG/M
3300003697\|Ga0003072J53071_116618	Not Available	561	Open in IMG/M
3300004101\|Ga0058896_1005559	Not Available	507	Open in IMG/M
3300004115\|Ga0058890_105941	Not Available	596	Open in IMG/M
3300004119\|Ga0058887_1012874	Not Available	511	Open in IMG/M
3300004800\|Ga0058861_10112828	Not Available	523	Open in IMG/M
3300007219\|Ga0075025_1049698	Not Available	591	Open in IMG/M
3300007526\|Ga0075022_1702684	Not Available	538	Open in IMG/M
3300008785\|Ga0103638_1003004	Not Available	583	Open in IMG/M
3300010061\|Ga0127462_103473	Not Available	517	Open in IMG/M
3300010061\|Ga0127462_130488	Not Available	510	Open in IMG/M
3300010061\|Ga0127462_150209	Not Available	574	Open in IMG/M
3300010061\|Ga0127462_181465	Not Available	581	Open in IMG/M
3300010063\|Ga0127431_130893	Not Available	564	Open in IMG/M
3300010066\|Ga0127427_136039	Not Available	567	Open in IMG/M
3300010069\|Ga0127467_111768	Not Available	572	Open in IMG/M
3300010072\|Ga0127428_161146	Not Available	578	Open in IMG/M
3300010073\|Ga0127429_138007	Not Available	577	Open in IMG/M
3300010074\|Ga0127439_146854	Not Available	564	Open in IMG/M
3300010075\|Ga0127434_116584	Not Available	570	Open in IMG/M
3300010076\|Ga0127430_126217	Not Available	564	Open in IMG/M
3300010078\|Ga0127487_121626	Not Available	581	Open in IMG/M
3300010078\|Ga0127487_135014	Not Available	574	Open in IMG/M
3300010081\|Ga0127457_1066120	Not Available	566	Open in IMG/M
3300010082\|Ga0127469_105732	Not Available	561	Open in IMG/M
3300010082\|Ga0127469_161667	Not Available	581	Open in IMG/M
3300010084\|Ga0127461_1043909	Not Available	577	Open in IMG/M
3300010087\|Ga0127492_1069333	Not Available	585	Open in IMG/M
3300010090\|Ga0127471_1003159	Not Available	572	Open in IMG/M
3300010090\|Ga0127471_1061339	Not Available	566	Open in IMG/M
3300010090\|Ga0127471_1104521	Not Available	545	Open in IMG/M
3300010091\|Ga0127485_1046959	Not Available	589	Open in IMG/M
3300010092\|Ga0127468_1065609	Not Available	568	Open in IMG/M
3300010092\|Ga0127468_1109040	Not Available	579	Open in IMG/M
3300010095\|Ga0127475_1101713	Not Available	589	Open in IMG/M
3300010098\|Ga0127463_1036762	Not Available	589	Open in IMG/M
3300010103\|Ga0127500_1098733	Not Available	589	Open in IMG/M
3300010111\|Ga0127491_1029069	Not Available	511	Open in IMG/M
3300010116\|Ga0127466_1014349	Not Available	544	Open in IMG/M
3300010118\|Ga0127465_1020078	Not Available	565	Open in IMG/M
3300010118\|Ga0127465_1071806	Not Available	570	Open in IMG/M
3300010120\|Ga0127451_1013788	Not Available	559	Open in IMG/M
3300010134\|Ga0127484_1044678	Not Available	586	Open in IMG/M
3300010134\|Ga0127484_1098913	Not Available	582	Open in IMG/M
3300010134\|Ga0127484_1192978	Not Available	581	Open in IMG/M
3300010142\|Ga0127483_1239062	Not Available	585	Open in IMG/M
3300010147\|Ga0126319_1066921	Not Available	584	Open in IMG/M
3300010154\|Ga0127503_11192682	Not Available	547	Open in IMG/M
3300010856\|Ga0126358_1114113	Not Available	593	Open in IMG/M
3300010862\|Ga0126348_1341760	Not Available	594	Open in IMG/M
3300010867\|Ga0126347_1427775	Not Available	571	Open in IMG/M
3300010896\|Ga0138111_1045528	Not Available	538	Open in IMG/M
3300011120\|Ga0150983_12482719	Not Available	596	Open in IMG/M
3300012212\|Ga0150985_112206156	Not Available	580	Open in IMG/M
3300012224\|Ga0134028_1101848	Not Available	590	Open in IMG/M
3300012364\|Ga0134027_1056610	Not Available	584	Open in IMG/M
3300012364\|Ga0134027_1151322	Not Available	600	Open in IMG/M
3300012377\|Ga0134029_1021311	Not Available	506	Open in IMG/M
3300012379\|Ga0134058_1248935	Not Available	590	Open in IMG/M
3300012380\|Ga0134047_1178305	Not Available	594	Open in IMG/M
3300012381\|Ga0134026_1047212	Not Available	578	Open in IMG/M
3300012382\|Ga0134038_1178498	Not Available	581	Open in IMG/M
3300012387\|Ga0134030_1117702	Not Available	579	Open in IMG/M
3300012387\|Ga0134030_1211302	Not Available	520	Open in IMG/M
3300012387\|Ga0134030_1244090	Not Available	548	Open in IMG/M
3300012388\|Ga0134031_1000749	Not Available	524	Open in IMG/M
3300012388\|Ga0134031_1001445	Not Available	508	Open in IMG/M
3300012388\|Ga0134031_1308329	Not Available	597	Open in IMG/M
3300012391\|Ga0134035_1012661	Not Available	564	Open in IMG/M
3300012400\|Ga0134048_1032114	Not Available	590	Open in IMG/M
3300012401\|Ga0134055_1093113	Not Available	604	Open in IMG/M
3300012407\|Ga0134050_1382190	Not Available	581	Open in IMG/M
3300012469\|Ga0150984_116947642	Not Available	588	Open in IMG/M
3300013043\|Ga0154018_104211	Not Available	581	Open in IMG/M
3300013064\|Ga0154013_111669	Not Available	590	Open in IMG/M
3300019254\|Ga0184641_1005638	Not Available	535	Open in IMG/M
3300019255\|Ga0184643_1242672	Not Available	578	Open in IMG/M
3300019259\|Ga0184646_1059238	Not Available	596	Open in IMG/M
3300019279\|Ga0184642_1001804	Not Available	590	Open in IMG/M
3300021855\|Ga0213854_1363694	Not Available	594	Open in IMG/M
3300021857\|Ga0213849_1249800	Not Available	585	Open in IMG/M
3300021860\|Ga0213851_1080947	Not Available	588	Open in IMG/M
3300021947\|Ga0213856_1243964	Not Available	559	Open in IMG/M
3300022195\|Ga0222625_1695738	Not Available	591	Open in IMG/M
3300022467\|Ga0224712_10500992	Not Available	587	Open in IMG/M
3300022509\|Ga0242649_1050085	Not Available	585	Open in IMG/M
3300022511\|Ga0242651_1034879	Not Available	579	Open in IMG/M
3300022513\|Ga0242667_1005607	Not Available	994	Open in IMG/M
3300022522\|Ga0242659_1103707	Not Available	565	Open in IMG/M
3300022527\|Ga0242664_1098819	Not Available	597	Open in IMG/M
3300022533\|Ga0242662_10043069	All Organisms → cellular organisms → Bacteria → Acidobacteria	1138	Open in IMG/M
3300022708\|Ga0242670_1051240	Not Available	588	Open in IMG/M
3300022712\|Ga0242653_1076612	Not Available	583	Open in IMG/M
3300022712\|Ga0242653_1080652	Not Available	572	Open in IMG/M
3300022713\|Ga0242677_1054675	Not Available	594	Open in IMG/M
3300022714\|Ga0242671_1079320	Not Available	594	Open in IMG/M
3300022715\|Ga0242678_1038995	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	653	Open in IMG/M
3300026380\|Ga0213910_121110	Not Available	593	Open in IMG/M
3300026386\|Ga0213909_109617	Not Available	578	Open in IMG/M
3300030776\|Ga0075396_1009218	Not Available	551	Open in IMG/M
3300030776\|Ga0075396_1951375	Not Available	553	Open in IMG/M
3300030777\|Ga0075402_12508819	Not Available	573	Open in IMG/M
3300030778\|Ga0075398_12113623	Not Available	589	Open in IMG/M
3300030829\|Ga0308203_1065771	Not Available	574	Open in IMG/M
3300030830\|Ga0308205_1046746	Not Available	569	Open in IMG/M
3300030846\|Ga0075403_10020302	Not Available	568	Open in IMG/M
3300030846\|Ga0075403_11567313	Not Available	557	Open in IMG/M
3300030849\|Ga0075393_10006718	Not Available	599	Open in IMG/M
3300030902\|Ga0308202_1103234	Not Available	591	Open in IMG/M
3300030904\|Ga0308198_1066279	Not Available	585	Open in IMG/M
3300030916\|Ga0075386_10007486	Not Available	556	Open in IMG/M
3300030939\|Ga0138303_1346740	Not Available	596	Open in IMG/M
3300030967\|Ga0075399_10109350	Not Available	600	Open in IMG/M
3300030968\|Ga0075376_10019260	Not Available	594	Open in IMG/M
3300030969\|Ga0075394_10079174	Not Available	592	Open in IMG/M
3300030969\|Ga0075394_10079366	Not Available	583	Open in IMG/M
3300030979\|Ga0068589_10000582	Not Available	557	Open in IMG/M
3300030986\|Ga0308154_112570	Not Available	572	Open in IMG/M
3300030987\|Ga0308155_1022838	Not Available	587	Open in IMG/M
3300030988\|Ga0308183_1141695	Not Available	585	Open in IMG/M
3300030990\|Ga0308178_1109503	Not Available	596	Open in IMG/M
3300031058\|Ga0308189_10354092	Not Available	592	Open in IMG/M
3300031081\|Ga0308185_1040803	Not Available	581	Open in IMG/M
3300031082\|Ga0308192_1057853	Not Available	595	Open in IMG/M
3300031091\|Ga0308201_10291960	Not Available	577	Open in IMG/M
3300031092\|Ga0308204_10226347	Not Available	595	Open in IMG/M
3300031098\|Ga0308191_1034708	Not Available	547	Open in IMG/M
3300031100\|Ga0308180_1028905	Not Available	571	Open in IMG/M
3300031231\|Ga0170824_107395765	Not Available	566	Open in IMG/M
3300031423\|Ga0308177_1019544	Not Available	588	Open in IMG/M
3300031446\|Ga0170820_11568600	Not Available	606	Open in IMG/M
3300031469\|Ga0170819_14089745	Not Available	553	Open in IMG/M
3300031469\|Ga0170819_15345885	Not Available	596	Open in IMG/M
3300031474\|Ga0170818_105520658	Not Available	607	Open in IMG/M
3300031677\|Ga0307480_1014371	Not Available	586	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.04%
Host-Associated	Host-Associated	2.96%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	86.67%
Aquatic	Environmental → Aquatic	10.37%
Plants	Host-Associated → Plants	2.22%
Human	Host-Associated → Human	0.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	86.67%
Freshwater	Environmental → Aquatic → Freshwater	10.37%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.48%
Digestive System	Host-Associated → Human → Digestive System	0.74%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	82.96%
Sediment	Environmental → Aquatic → Freshwater → Sediment	8.15%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	2.22%
Loam	Environmental → Terrestrial → Soil → Loam	2.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.48%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.74%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.74%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	59.26%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	23.70%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	8.15%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.96%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.48%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	0.74%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.74%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	41.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	19.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	11.85%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	4.44%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	3.70%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.70%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	2.22%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	2.22%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.96%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.48%
Enriched Soil Aggregate	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Enriched Soil Aggregate	1.48%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.48%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	0.74%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.74%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.74%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.74%
Wetland Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Wetland Soil	0.74%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003575	Grassland soil microbial communities from Hopland, California, USA - Sample H1_Rhizo_25 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300003697	Groundwater microbial communities from coal-tar-waste-contaminated well in S. Glens Falls, New York, USA - aqueous naphthalene treatment rep 3 (Metagenome Metatranscriptome, Counting Only)	Environmental	Open in IMG/M
3300004101	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF228 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004115	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF216 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004119	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF210 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004800	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300007219	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaT_SC_2013 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300007526	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaT_CSR_2012 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300008785	Microbial communities from wetland soil in Czech Republic - R1_cDNA	Environmental	Open in IMG/M
3300010061	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010063	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010066	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_2_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010069	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010072	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_2_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010073	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_2_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010074	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_5_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010075	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_2_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010076	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_2_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010078	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010081	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010082	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010084	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010087	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010090	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010091	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010092	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010095	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010098	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010103	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010111	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010116	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010118	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010120	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010134	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010142	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010147	Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010856	Boreal forest soil eukaryotic communities from Alaska, USA - W4-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010862	Boreal forest soil eukaryotic communities from Alaska, USA - C4-4 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010867	Boreal forest soil eukaryotic communities from Alaska, USA - C3-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010896	Grasslands soil microbial communities from Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012224	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012377	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012379	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012380	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012381	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012382	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012387	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012388	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012391	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012400	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012401	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012407	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300013043	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300013064	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019254	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019255	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019259	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019279	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021855	Metatranscriptome of freshwater sediment microbial communities from pre-fracked creek in Pennsylvania, United States - G-2016_18 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021857	Metatranscriptome of freshwater microbial communities from pre-fracked creek in Pennsylvania, United States - WE:C (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021860	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2014 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021947	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - G-2016_32 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022195	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022509	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022511	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022513	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022522	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022527	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022708	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022712	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-32-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022713	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022714	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022715	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300026380	Metatranscriptome of enriched soil aggregate microbial communities from Iowa State University, Ames, United States - MC6-MC0909-MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300026386	Metatranscriptome of enriched soil aggregate microbial communities from Iowa State University, Ames, United States - MC6-MC0907-MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030776	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA10 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030777	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB5 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030778	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB6 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030829	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_357 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030830	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_368 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030846	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB5 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030849	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB4 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030902	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_356 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030904	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_202 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030916	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030939	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A9_MS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300030967	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA11 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030968	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB6 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030969	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030979	Forest soil microbial communities from France, for metatranscriptomics studies - Site 11 - Champenoux / Amance forest (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030986	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_143 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030987	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_144 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030988	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_157 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030990	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_149 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031081	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_159 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031082	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_193 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031091	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031098	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_186 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031100	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_151 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031423	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_148 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031677	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0007409J51694_10364881	3300003575	Avena Fatua Rhizosphere	QVTRQAACSPTGMHGQNVAFGDGVTFCPLLPAAGFVRLRIDALVRVR*
Ga0003072J53071_1166182	3300003697	Groundwater	QAACSPTGMHGQNVASGDGVTLSPLLPAAGFARLRIDALVRVR*
Ga0058896_10055591	3300004101	Forest Soil	FQVTRQAACSPTGMHGQNVASGDGVTSPLLPAAGFIRLRINALVRVR*
Ga0058890_1059412	3300004115	Forest Soil	FQVTRQAACSPTGMHGQNVASEYGVTSPLLPAAGFIQLRIKALVRIR*
Ga0058887_10128743	3300004119	Forest Soil	WFQVTRQAACSPTGMHGQNVASGDGVTSPLLPAAGFTQLRINALVRVR*
Ga0058861_101128281	3300004800	Host-Associated	FQVTRQAACSPAGMHGQNVASGDGVTLSPLLPVAGFTRPRIDALVRVR*
Ga0075025_10496981	3300007219	Watersheds	FQVTRQAACSPTGMHGQNVASGDGVTLSPLLPAAGFARLRIDALVRVR*
Ga0075022_17026841	3300007526	Watersheds	RQAVCSPTGMHGQNVASGHGVTFAPLLPAAGFIRLRINALVRVR*
Ga0103638_10030041	3300008785	Wetland Soil	WFQVTRQAACSPTGMHGQNVASGDGVTFALCSPKPVFPRLRINALVHVR*
Ga0127462_1034731	3300010061	Grasslands Soil	VTRQAACSPTGMHGQNVAFGDGVTFSPLLPAAGFIRLRIDALVRVR*
Ga0127462_1304881	3300010061	Grasslands Soil	QAACSPTGMHGQNVAFGDGVTFSPLLPAAGFIRLRIEALVRVR*
Ga0127462_1502091	3300010061	Grasslands Soil	DPSGACSPTGMHGQNVASGDGVTLCPLLPAAGFTRLRINALVRVR*
Ga0127462_1814651	3300010061	Grasslands Soil	TRQAACSPTGMHGQNVASGDGVTLSPLLPAAGFARLRIDALVRVR*
Ga0127431_1308931	3300010063	Grasslands Soil	DPSAACSPTGMHGQNVASGDGVTLSPLLPAAGFDRLRIDALVRVR*
Ga0127427_1360391	3300010066	Grasslands Soil	AACSPTGMHGQNVASGDGVTLSPLLPAAGFDRLRIDALVRVR*
Ga0127467_1117681	3300010069	Grasslands Soil	RQAACSPTGMHGQNVASGDGVTLCPLLPAAGFTRLRINALVRVR*
Ga0127428_1611462	3300010072	Grasslands Soil	RQAACSPTGMHGQNVASGDGVTLSPLLPAAGFARLRIDALVRVR*
Ga0127429_1380071	3300010073	Grasslands Soil	VTRQAACSPTGMHGQNVASDDGVTLCPLLPAAGFTRLRIDALVRVR*
Ga0127439_1468541	3300010074	Grasslands Soil	QAACSPTGMHGQNVAFGDGVTFSPLLPAAGFIRLRIDALVRVR*
Ga0127434_1165841	3300010075	Grasslands Soil	ACSPTGMHGQNVAFGDGVTFSPLLPAAGFIRLRIEALVRVR*
Ga0127430_1262171	3300010076	Grasslands Soil	QAACSPTGMHGQNVAFGDGVTFSPLLPAAGFIRLRIEALARVR*
Ga0127487_1216261	3300010078	Grasslands Soil	QVTRQAACSPTGMHGQNVASGDGVTLSPLLPAAGFDRLRIDALVRVR*
Ga0127487_1350141	3300010078	Grasslands Soil	TRQAACSPTGMHGQNVAFGDGVTFSPLLPAAGFIRLRIEALVRVR*
Ga0127457_10661201	3300010081	Grasslands Soil	AACSPTGMHGQNVAFGDGVTFSPLLPAAGFIRLRIEALVRVR*
Ga0127469_1057321	3300010082	Grasslands Soil	CSPTGMHGQNVAFGDGVTFSPLLPAAGFIRLRIEALVRVR*
Ga0127469_1616671	3300010082	Grasslands Soil	SDPSAACSPTGMHGQNVASGDGVTLSPLLPAAGFDRLRIDALVRVR*
Ga0127461_10439091	3300010084	Grasslands Soil	RQAACSPTGMHGQNVAFGDGVTFSPLLPAAGFIRLRIEALVRVR*
Ga0127492_10693331	3300010087	Grasslands Soil	QVTRQAACSPTGMHGQNVAFGDGVTFSPLLPAAGFIRLRIEALVRVR*
Ga0127471_10031591	3300010090	Grasslands Soil	RQAACSPTGMHGQNVAFGDGVTFSPLLPAAGFIRLRIDALVRAR*
Ga0127471_10613391	3300010090	Grasslands Soil	AACSPTGMHGQNVASGDGVTLCPLLPAAGFTRLRINALVRVR*
Ga0127471_11045211	3300010090	Grasslands Soil	VTRQAACSPTGMHGQNVASGDGVTLSPLLPAAGFARLRIDALVRVR*
Ga0127485_10469592	3300010091	Grasslands Soil	VPSDPAAACSPTGMHGQNVASGDGVTLSPLLPAAGFDRLRIDALVRVR*
Ga0127468_10656091	3300010092	Grasslands Soil	ACSPTGMHGQNVASGDGVTLCPLLPAAGFTRLRINALVRVR*
Ga0127468_11090401	3300010092	Grasslands Soil	VTRQAACSPTGMHGQNVAFGDGVTFSPLLPAAGFIRLRIEALVRVR*
Ga0127475_11017131	3300010095	Grasslands Soil	FQVTRQAACSPTGMHGQNVAFGDGVTFSPLLPAAGFIRLRIDALVRVR*
Ga0127463_10367621	3300010098	Grasslands Soil	FQVTRQAACSPTGMHGQNVASDDGVTLCPLLPAAGFTRLRIDALVRVR*
Ga0127500_10987331	3300010103	Grasslands Soil	FQVTRQAACSPTGMHGQNVAFGDGVTFSPLLPAAGFIRLRIEALVRVR*
Ga0127491_10290691	3300010111	Grasslands Soil	QVTRQAACSPTGMHGQNVASGDGVTLCPLLPAAGFTRLRINALVRVR*
Ga0127466_10143491	3300010116	Grasslands Soil	CSPTGMHGQNVASGDGVTLSPLLPAAGFDRLRIDALVRVR*
Ga0127465_10200781	3300010118	Grasslands Soil	AACSPTGMHGQNVASGDGVTLSPLLPAAGFARLRIDALVRVR*
Ga0127465_10718061	3300010118	Grasslands Soil	SPTGMHGQNVAFGDGVTFSPLLPAAGFIRLRIEALVRVR*
Ga0127451_10137881	3300010120	Grasslands Soil	CSPTGMHGQNVASGDGVTLCPLLPAAGFTRLRINALVRVR*
Ga0127484_10446781	3300010134	Grasslands Soil	QVTRRAACSPTGMHGQNVAFGDGVTFSPLLPAAGFIRLRIEALVRVR*
Ga0127484_10989131	3300010134	Grasslands Soil	PAAACSPTGMHGQNVASGDGVTLSPLLSAAGFDRLRIDALVRVR*
Ga0127484_11929781	3300010134	Grasslands Soil	TRQAACYPTGMHGQNVASGDGVTLCPLLPAAGFTRLRINALVRVR*
Ga0127483_12390621	3300010142	Grasslands Soil	DPSAACSPTGMHGQNVASGDGVTLSPLLSAAGFDRLRIDALVRVR*
Ga0126319_10669211	3300010147	Soil	FQVTRQAVCSPTGMHGQNVASGDGVTFSPLLPAAGFIRLRIDALVRAR*
Ga0127503_111926821	3300010154	Soil	QVTRQAACSPTGMHGQNVASGDGVTFSPLLPAAGFIRLRIDALVRVR*
Ga0126358_11141131	3300010856	Boreal Forest Soil	FQVTRQAACSPTGMHGQNVASGDGVTFSPLLPAAGFARLRIDALVRVR*
Ga0126348_13417601	3300010862	Boreal Forest Soil	FQVTRQAACSPTGMHGQNVASGDGVTFSPLLPAAGFIRLRIDALVRVR*
Ga0126347_14277752	3300010867	Boreal Forest Soil	FQVTRQAACSPTGMHGQNVASGDGVTFALCSPAPVFHRLRINALVRVR*
Ga0138111_10455281	3300010896	Grasslands Soil	ACSPTGMHGQNVASGDGVTLSPLLPAAGFDRLRIDALVRVR*
Ga0150983_124827191	3300011120	Forest Soil	FQVTRQAACSPAGMHGQNVAPGLWRDVSPLLPAAGFIRLRINALVRVR*
Ga0150985_1122061561	3300012212	Avena Fatua Rhizosphere	FQVTRQAVCSPTGMHGQNVASDDGVTLCPLLPAAGFIRLRIDALVRVR*
Ga0134028_11018481	3300012224	Grasslands Soil	FQVTRQAACSPTGMHGQNVASGDGVTLCPLLPAAGFTRLRIDALVGVR*
Ga0134027_10566101	3300012364	Grasslands Soil	QVTRQAACSPTGMHGQNVAFGDGVTFSPLLPAAGFIRLRIDALVRVR*
Ga0134027_11513221	3300012364	Grasslands Soil	VPSDPSAACSPTGMHGQNVASGDGVTLSPLLPAAGFDRLRIDALVRVR*
Ga0134029_10213111	3300012377	Grasslands Soil	AACSPTGMHGQNVAFGDGVTFSPLLPAAGFIRLRIDALVRVR*
Ga0134058_12489351	3300012379	Grasslands Soil	FQVTRQAACSPTGMHGQNVASGDGVTLCPLLPAAGFTRLRINALVRVR*
Ga0134047_11783051	3300012380	Grasslands Soil	PSDPSAACSPTGMHGQNVASGDGVTLSPLLPAAGFARLRIDALVRVR*
Ga0134026_10472121	3300012381	Grasslands Soil	QAACSPTGMHGQNVASGDGVTLCPLLPAAGFTRLRINALVRVR*
Ga0134038_11784981	3300012382	Grasslands Soil	TRQAACSPTGMHGQNVAFGDGVTFSPLLPAAGFIRLRIDALVRVR*
Ga0134030_11177022	3300012387	Grasslands Soil	DPSAACSPTGMHGQNVASGDGVTLSPLLPAAGFARLRIDALVRVR*
Ga0134030_12113021	3300012387	Grasslands Soil	QVTRQAACSPTGMHGQNVAFGDGVTFSPLLPAAGFIRLRIDALVRAR*
Ga0134030_12440901	3300012387	Grasslands Soil	QVTRQAACSPTGMHGQNVASDDGVTLCPLLPAAGFTRLRIDALVRVR*
Ga0134031_10007491	3300012388	Grasslands Soil	FQVTRQAACSPTGMHGQNVAFGDGVTFSPLLPAAGFIRLRIDALVRAR*
Ga0134031_10014451	3300012388	Grasslands Soil	FQVTRQAACSPTGMHGQNVASDDGVTLCPLLPAAGFTRLRIDAVVRVR*
Ga0134031_13083292	3300012388	Grasslands Soil	VPSDPSAACSPTGMHGQNVASGDGVTLSPLLPAAGCDRLRIDALVRVR*
Ga0134035_10126611	3300012391	Grasslands Soil	CSPTGMHGQNVAFGDGVTFSPLLPAAGFIRLRIDALVRVR*
Ga0134048_10321141	3300012400	Grasslands Soil	QVTRQAACSPTGMHGQNVASGDGVTLSPLLPAAGFARLRIDALVRVR*
Ga0134055_10931131	3300012401	Grasslands Soil	VWLFWFQVTRQAACSPTGMHGQNVAFGDGVTFSPLLPAAGFIRLRIEALVRVR*
Ga0134050_13821901	3300012407	Grasslands Soil	VTRQAACSPTGMHGQNVASGDGVTLCPLLPAAGFTRLRINALVRVR*
Ga0150984_1169476421	3300012469	Avena Fatua Rhizosphere	QVTRQAACSPTGMHGQNVASGDGVTLCPLLPAAGFTRLRIDALVRVR*
Ga0154018_1042111	3300013043	Corn, Switchgrass And Miscanthus Rhizosphere	TRQAACSPAGMHGQNVASGDGVTLSPLLPVAGFARPRIDALVRVR*
Ga0154013_1116692	3300013064	Corn, Switchgrass And Miscanthus Rhizosphere	FQVTRQAACSPAGMHGQNVASGDGVTLSPLLPVAGFARQRINALVRVR*
Ga0184641_10056381	3300019254	Groundwater Sediment	SDPSAACSPTGMHGQNVASGDGVTLRPLLPAAGFDRLRIDALVRVR
Ga0184643_12426721	3300019255	Groundwater Sediment	VTRQAACSPTGMHGQNVASGDGVTLSPLLPAAGFDRLRIDALVRVR
Ga0184646_10592381	3300019259	Groundwater Sediment	VPSDPSAACSPTGMHGQNVASGDGVTLSPLLPAAGFDRLRIDALVRVR
Ga0184642_10018042	3300019279	Groundwater Sediment	FQVTRQAVCSPTGMHGQNVASGDGVTLSPLLPAAGFARLRIDTLVRVR
Ga0213854_13636941	3300021855	Watersheds	KWFQVTRQAACSPTGMHGQNVASGIWRDLCPLLPAAGFIRLRIKALVRVR
Ga0213849_12498001	3300021857	Watersheds	FQVTRQAACSPTGMHGQNVASGIWRDLCPLLPAAGFIRLRIKALVRVR
Ga0213851_10809471	3300021860	Watersheds	TLGPVCSPTGMHGQNVAFGSGVTVCPLLPEAGLAQSRINAPVLVRNLFP
Ga0213856_12439641	3300021947	Watersheds	FQVTRQAACSPTGMHGQNVASGDGVTLSPLLPAAGFARLRINALVRVR
Ga0222625_16957382	3300022195	Groundwater Sediment	FQVTRQAACSPTGMHGQNVAFGDGVTLSPLLPAAGFVRLRIDALVRVR
Ga0224712_105009921	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	QVTRQAACSPAGMHGQNVASGDGVTLSPLLPVAGFARPRIDALVRVR
Ga0242649_10500851	3300022509	Soil	LGPVCSPTGMHGQNVAFGSGVTVCPLLPEAGLAQSRINAPVLVRNLFP
Ga0242651_10348791	3300022511	Soil	VTRQAGCSPAGMHGQNVAPGLWRDVSPLLPAAGFIRLRINALVRVR
Ga0242667_10056072	3300022513	Soil	VCSPTGMHGQNVAFGSGVTVCPLLPEAGLAQSRINAPVLVRNLFP
Ga0242659_11037071	3300022522	Soil	SPTGMHGQNVAFGSGVTVCPLLPEAGLAQSRINAPVLVRNLFP
Ga0242664_10988191	3300022527	Soil	FQVTRQAACSPTGMHGQNVASGDGVTYALCSPVPVFPRLRINTLVRVR
Ga0242662_100430691	3300022533	Soil	VTQKTVCSPTGMHGQNVAFGSGVTVCPLLPEAGLAQSRINAPVLVRNLFP
Ga0242670_10512402	3300022708	Soil	FQVTRQAACSPAGMHGQNVAPGLWRDVSPLLPAAGFIRLRINALVRVR
Ga0242653_10766121	3300022712	Soil	QVTRRSAHSPTGMHGQNMASGDGVTLSPLLPAAAFIPLRINAPVRVRFPYQ
Ga0242653_10806521	3300022712	Soil	LFPTGMHGQNVAFGSGVTVCPLLPEAGLAQSRINAPVLVRNLFP
Ga0242677_10546751	3300022713	Soil	ALGPVCSPTGMHGQNVAFGSGVTVCPLLPEAGLAQSRINAPVLVRNLFP
Ga0242671_10793201	3300022714	Soil	QATLGPVCSPTGMHGQNVAFGSGVTVCPLLPEAGLAQSRINAPVLVRNLFP
Ga0242678_10389951	3300022715	Soil	QVTLGPVCSPTGMHGQNVAFGSGVTVCPLLPEAGLAQSRINAPVLVRNLFP
Ga0213910_1211103	3300026380	Enriched Soil Aggregate	VQVTRQAACSPAGMHGQNVASGDGVTLSPLLPVAGFARQRINALVRVR
Ga0213909_1096171	3300026386	Enriched Soil Aggregate	VTRQAACSPAGMHGQNVASGDGVTLSPLLPVAGFARQRINALVRVR
Ga0075396_10092181	3300030776	Soil	FQVTRQAACSPAGMHGQNVAPGLWRDVSPLLPAAGFTRLRINALVRVR
Ga0075396_19513751	3300030776	Soil	WFQVTRQAACSPTGMHGQNVAFGDGVTLCPLLPAAGFIRLRIDALVRVR
Ga0075402_125088191	3300030777	Soil	QVTRQAACSPTGMHGQNVAFGDGVTLCPLLPAAGFIRLRIDALVRVR
Ga0075398_121136231	3300030778	Soil	PLLFLFLLLLPKWFQVTRQAACSPAGMHGQNVAPGLWRDVSPLLPAAGFTRLRINALVRV
Ga0308203_10657711	3300030829	Soil	QAACSPTGMHGQNVASGDGVTLSPLLPAAGFARLRIDALVRVR
Ga0308205_10467463	3300030830	Soil	DPSAACSPTGMHGQNVASGDGVTLSPLLPAAGFARLRIDALVRVR
Ga0075403_100203021	3300030846	Soil	MHGQNVAPGLWRDVSPLLPAAGFTRLRINALVRVC
Ga0075403_115673131	3300030846	Soil	FQVTRQAACSPTGMHGQNVAFGDGVTLCPLLPAAGFIRLRIDALVRVR
Ga0075393_100067181	3300030849	Soil	QVTRQAACSPTGMHGQNVAFGDGATLCPLLPAAGFIRLRIDALVRVR
Ga0308202_11032343	3300030902	Soil	FQVTRQAACSPTGMHGQNVASGDGVTLSPLLPAAGFARLRIDALVRVR
Ga0308198_10662791	3300030904	Soil	SDPSAACSPTGMHGQNVASGDGVTLSPLLPAAGFDRLRIDALVRVR
Ga0075386_100074861	3300030916	Soil	KWFQVTRQAACSPTGMHGQNVAFGDGVTLCPLLPAAGFIRLRIDALVRVR
Ga0138303_13467401	3300030939	Soil	FQVTRQAACSPAGMHGQNVAPGLWRDVNPLLPAAGFIRLRINALVRVC
Ga0075399_101093501	3300030967	Soil	QVTRQAACSPTGMHGQNVASGDGVTLCPLLPAAGFIRLRIDALVRVR
Ga0075376_100192601	3300030968	Soil	RQAACSPTGMHGQNVASGDGVTFSPLLPATGFIRLRIDALVRVR
Ga0075394_100791741	3300030969	Soil	RQAACSPTGMHGQNVASGDGVTLCPLLPAAGFIRLRINALVRVR
Ga0075394_100793661	3300030969	Soil	WFQVTRQAACSPTGMHGQNVASGDGVTLCPLLPAAGFIRLRIDALVRVR
Ga0068589_100005821	3300030979	Soil	PAGMHGQNVAPGLWRDVSPLLPAAGFTRLRINALVRVR
Ga0308154_1125701	3300030986	Soil	CSPTGMHGQNVASGDGVTLSPLLPAAGFDRLRIDALVRVR
Ga0308155_10228381	3300030987	Soil	ARQAACSPTGMHGQNVASGDGVTLSPLLPAAGFARLRIDALVRVR
Ga0308183_11416951	3300030988	Soil	RQAACSPTGMHGQNVASGDGVTLSPLLPAAGFARLRIDALVRVR
Ga0308178_11095031	3300030990	Soil	VPSDPSAACSPTGMHGQNVASGDGVTLSPLLPAAGFARLRIDALVRVR
Ga0308189_103540921	3300031058	Soil	WFQVTRQAACSPTGMHGQNVASGDGVTLSPLLPAAGFARLRIDALVRVR
Ga0308185_10408031	3300031081	Soil	QVTRQAACSPTGMHGQNVASGDGVTLSPLLPAAGFARLRIDALVRVR
Ga0308192_10578531	3300031082	Soil	PSDPSAACSPTGMHGQNVASGDGVTLSPLLPAAGFDRLRIDALVRVR
Ga0308201_102919601	3300031091	Soil	AACSPTGMHGQNVASGDGVTLSPLLPAAGFDRLRIDALVRVR
Ga0308204_102263471	3300031092	Soil	VPSDPAAACSPTGMHGQNVASGDGVTLSPLLPAAGFDRLRIDALVRVR
Ga0308191_10347081	3300031098	Soil	AACSPTGMHGQNVASGDGVTLRPLLPAAGFDRLRIDALVRVR
Ga0308180_10289051	3300031100	Soil	AACSPTGMHGQNVASGDGVTLSPLLPAAGFARLRIDALVRVR
Ga0170824_1073957651	3300031231	Forest Soil	WFQVTRQAVCSPTGMHGQNVASGDGVTFSPLLPAAGFVRLRIDALVRVR
Ga0308177_10195441	3300031423	Soil	DPSAACSPTGMHGQNVASGDGVTLSPLLPAAGFDRLRIDALVRVR
Ga0170820_115686001	3300031446	Forest Soil	FQVTRQAVCSPTGMHGQNVASGDGVTFSPLLPAAGFVRLRIDALVRVR
Ga0170819_140897451	3300031469	Forest Soil	TRQAVCSPTGMHGQNVASGDGVTFSPLLPAAGFVRLRIDALVRVR
Ga0170819_153458851	3300031469	Forest Soil	QVTRQAACSPAGMHGQNVAPGLWRDVSPLLPAAGFIRLRINALVRVC
Ga0170818_1055206581	3300031474	Forest Soil	FQVTRQAACSPTGMHGQNVASGDGVTFSPLLPATGFIRLRIDALVRVR
Ga0307480_10143711	3300031677	Hardwood Forest Soil	QVTRQAACSPTGMHGQNVASGDGVTFSPLLPAAGFIRLRIDALVRVR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F057921

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences