Metagenome / Metatranscriptome Family F057950

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F057950
Family Type	Metagenome / Metatranscriptome
Number of Sequences	135
Average Sequence Length	68 residues
Representative Sequence	MAKAKKTKPRELPRWRVSLITKTPAKFIDFTLAPDAETAEKQVAEAHDISETLRDRLVAIREDW
Number of Associated Samples	72
Number of Associated Scaffolds	134

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	49.25 %
% of genes near scaffold ends (potentially truncated)	26.67 %
% of genes from short scaffolds (< 2000 bps)	85.93 %
Associated GOLD sequencing projects	64
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.63

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (68.148 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (48.889 % of family members)
Environment Ontology (ENVO)	Unclassified (47.407 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (53.333 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 18.48% β-sheet: 19.57% Coil/Unstructured: 61.96%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.63
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.63
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 134 Family Scaffolds
PF05532	CsbD	6.72
PF03401	TctC	1.49
PF05050	Methyltransf_21	1.49
PF13924	Lipocalin_5	1.49
PF08401	ArdcN	0.75
PF04392	ABC_sub_bind	0.75
PF03703	bPH_2	0.75
PF05598	DUF772	0.75
PF09509	Hypoth_Ymh	0.75
PF03480	DctP	0.75
PF13298	LigD_N	0.75
PF02586	SRAP	0.75
PF01381	HTH_3	0.75
PF13289	SIR2_2	0.75
PF13641	Glyco_tranf_2_3	0.75
PF06689	zf-C4_ClpX	0.75
PF08937	DUF1863	0.75
PF13340	DUF4096	0.75
PF06114	Peptidase_M78	0.75
PF12244	DUF3606	0.75

COG ID	Name	Functional Category	% Frequency in 134 Family Scaffolds
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	6.72
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	1.49
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	0.75
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.75
COG3402	Uncharacterized membrane protein YdbS, contains bPH2 (bacterial pleckstrin homology) domain	Function unknown [S]	0.75
COG3428	Uncharacterized membrane protein YdbT, contains bPH2 (bacterial pleckstrin homology) domain	Function unknown [S]	0.75
COG4227	Antirestriction protein ArdC	Replication, recombination and repair [L]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.15 %
All Organisms	root	All Organisms	31.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.15 %
cellular organisms	root	All Organisms → cellular organisms	31.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.15 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	31.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.15 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	25.93 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.15 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	21.48 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.74 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.15 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	13.33 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.48 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.74 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.15 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	8.15 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1.48 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.48 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.74 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.74 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.15 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	6.67 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.48 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.74 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	0.74 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	0.74 %
Rhodopseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas	0.74 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.74 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	0.74 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.15 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	2.22 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.48 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.74 %
unclassified Hyphomicrobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium	0.74 %
unclassified Afipia	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → unclassified Afipia	0.74 %
Variovorax boronicumulans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → Variovorax boronicumulans	0.74 %
Rhodopseudomonas palustris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	0.74 %
Bradyrhizobium genosp. L	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium genosp. L	0.74 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	0.74 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.15 %
Bradyrhizobium sp. 172	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 172	1.48 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.48 %
Bradyrhizobium sp. LTSP885	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. LTSP885	0.74 %
Afipia sp. Root123D2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → unclassified Afipia → Afipia sp. Root123D2	0.74 %
Hyphomicrobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium → Hyphomicrobium sp.	0.74 %
unclassified Rhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium	0.74 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.74 %
Rhodopseudomonas palustris BisA53	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris → Rhodopseudomonas palustris BisA53	0.74 %
Variovorax boronicumulans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → Variovorax boronicumulans	0.74 %
Bradyrhizobium genosp. L	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium genosp. L	0.74 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.15 %
Bradyrhizobium sp. 172	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 172	1.48 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.48 %
Rhizobium sp. P32RR-XVIII	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium → Rhizobium sp. P32RR-XVIII	0.74 %
Bradyrhizobium sp. LTSP885	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. LTSP885	0.74 %
Afipia sp. Root123D2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → unclassified Afipia → Afipia sp. Root123D2	0.74 %
Hyphomicrobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium → Hyphomicrobium sp.	0.74 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.74 %
Rhodopseudomonas palustris BisA53	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris → Rhodopseudomonas palustris BisA53	0.74 %
Variovorax boronicumulans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → Variovorax boronicumulans	0.74 %
Bradyrhizobium genosp. L	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium genosp. L	0.74 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.74 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001661\|JGI12053J15887_10236451	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	913	Open in IMG/M
3300004633\|Ga0066395_10367419	Not Available	803	Open in IMG/M
3300005332\|Ga0066388_101055280	All Organisms → cellular organisms → Bacteria → Proteobacteria	1369	Open in IMG/M
3300005332\|Ga0066388_102054338	Not Available	1026	Open in IMG/M
3300005332\|Ga0066388_103064510	Not Available	854	Open in IMG/M
3300005332\|Ga0066388_106125196	Not Available	607	Open in IMG/M
3300005332\|Ga0066388_106368648	Not Available	595	Open in IMG/M
3300005559\|Ga0066700_10402313	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	965	Open in IMG/M
3300005713\|Ga0066905_100165655	All Organisms → cellular organisms → Bacteria	1612	Open in IMG/M
3300005713\|Ga0066905_102038349	Not Available	533	Open in IMG/M
3300005764\|Ga0066903_100160701	All Organisms → cellular organisms → Bacteria → Proteobacteria	3257	Open in IMG/M
3300005764\|Ga0066903_100410614	All Organisms → cellular organisms → Bacteria → Proteobacteria	2234	Open in IMG/M
3300005764\|Ga0066903_104308164	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	761	Open in IMG/M
3300005764\|Ga0066903_105048341	Not Available	700	Open in IMG/M
3300005764\|Ga0066903_106538555	Not Available	607	Open in IMG/M
3300005764\|Ga0066903_107692713	Not Available	555	Open in IMG/M
3300006852\|Ga0075433_11462424	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium → Hyphomicrobium sp.	590	Open in IMG/M
3300006852\|Ga0075433_11573184	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 172	567	Open in IMG/M
3300006904\|Ga0075424_101315220	Not Available	768	Open in IMG/M
3300006904\|Ga0075424_102360684	Not Available	558	Open in IMG/M
3300006904\|Ga0075424_102439422	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 172	548	Open in IMG/M
3300007788\|Ga0099795_10009592	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2816	Open in IMG/M
3300007788\|Ga0099795_10017363	Not Available	2293	Open in IMG/M
3300007788\|Ga0099795_10024354	Not Available	2018	Open in IMG/M
3300007788\|Ga0099795_10025831	Not Available	1973	Open in IMG/M
3300009012\|Ga0066710_100779483	Not Available	1464	Open in IMG/M
3300009137\|Ga0066709_100532615	Not Available	1660	Open in IMG/M
3300009143\|Ga0099792_10777349	Not Available	625	Open in IMG/M
3300009143\|Ga0099792_11027943	Not Available	552	Open in IMG/M
3300010043\|Ga0126380_10863414	Not Available	747	Open in IMG/M
3300010043\|Ga0126380_11840475	Not Available	549	Open in IMG/M
3300010046\|Ga0126384_10504992	Not Available	1043	Open in IMG/M
3300010046\|Ga0126384_10564205	Not Available	991	Open in IMG/M
3300010047\|Ga0126382_10614495	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	897	Open in IMG/M
3300010047\|Ga0126382_12454792	Not Available	507	Open in IMG/M
3300010154\|Ga0127503_10086846	Not Available	717	Open in IMG/M
3300010159\|Ga0099796_10385962	Not Available	611	Open in IMG/M
3300010358\|Ga0126370_11985182	Not Available	568	Open in IMG/M
3300010359\|Ga0126376_11927610	Not Available	631	Open in IMG/M
3300010360\|Ga0126372_10210660	Not Available	1628	Open in IMG/M
3300010360\|Ga0126372_10360795	Not Available	1308	Open in IMG/M
3300010360\|Ga0126372_11331561	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	748	Open in IMG/M
3300010362\|Ga0126377_10471431	All Organisms → cellular organisms → Bacteria	1282	Open in IMG/M
3300010362\|Ga0126377_10505960	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1240	Open in IMG/M
3300010362\|Ga0126377_12023192	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	652	Open in IMG/M
3300010362\|Ga0126377_12873858	Not Available	555	Open in IMG/M
3300012199\|Ga0137383_10707392	Not Available	736	Open in IMG/M
3300012206\|Ga0137380_10371280	All Organisms → cellular organisms → Bacteria	1274	Open in IMG/M
3300012207\|Ga0137381_10137638	Not Available	2094	Open in IMG/M
3300012207\|Ga0137381_10148675	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2014	Open in IMG/M
3300012207\|Ga0137381_11044664	Not Available	704	Open in IMG/M
3300012208\|Ga0137376_10479756	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1079	Open in IMG/M
3300012209\|Ga0137379_11759453	Not Available	515	Open in IMG/M
3300012210\|Ga0137378_11737963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	529	Open in IMG/M
3300012211\|Ga0137377_11513443	Not Available	597	Open in IMG/M
3300012349\|Ga0137387_10035258	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3258	Open in IMG/M
3300012359\|Ga0137385_10611738	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	915	Open in IMG/M
3300012469\|Ga0150984_122038831	Not Available	538	Open in IMG/M
3300012683\|Ga0137398_10112024	Not Available	1731	Open in IMG/M
3300012685\|Ga0137397_10001415	All Organisms → cellular organisms → Bacteria → Proteobacteria	16772	Open in IMG/M
3300012685\|Ga0137397_10006428	All Organisms → cellular organisms → Bacteria	8138	Open in IMG/M
3300012685\|Ga0137397_10029763	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3881	Open in IMG/M
3300012685\|Ga0137397_10120283	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris → Rhodopseudomonas palustris BisA53	1934	Open in IMG/M
3300012685\|Ga0137397_10188119	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1535	Open in IMG/M
3300012685\|Ga0137397_10430232	Not Available	983	Open in IMG/M
3300012685\|Ga0137397_10534217	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. LTSP885	873	Open in IMG/M
3300012685\|Ga0137397_10760155	Not Available	719	Open in IMG/M
3300012685\|Ga0137397_10934750	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → Variovorax boronicumulans	642	Open in IMG/M
3300012924\|Ga0137413_10623874	Not Available	809	Open in IMG/M
3300012925\|Ga0137419_10118013	Not Available	1867	Open in IMG/M
3300012927\|Ga0137416_10887332	All Organisms → cellular organisms → Bacteria	792	Open in IMG/M
3300012927\|Ga0137416_12214937	Not Available	505	Open in IMG/M
3300012929\|Ga0137404_10599756	Not Available	990	Open in IMG/M
3300012930\|Ga0137407_10133374	Not Available	2173	Open in IMG/M
3300012930\|Ga0137407_10406011	Not Available	1262	Open in IMG/M
3300012930\|Ga0137407_10762674	Not Available	913	Open in IMG/M
3300012930\|Ga0137407_10850425	Not Available	862	Open in IMG/M
3300012930\|Ga0137407_11417755	Not Available	660	Open in IMG/M
3300012930\|Ga0137407_11505832	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	640	Open in IMG/M
3300012930\|Ga0137407_11614169	Not Available	618	Open in IMG/M
3300012930\|Ga0137407_11620451	Not Available	616	Open in IMG/M
3300012930\|Ga0137407_11772671	Not Available	588	Open in IMG/M
3300012930\|Ga0137407_12274390	Not Available	518	Open in IMG/M
3300012944\|Ga0137410_10139518	Not Available	1837	Open in IMG/M
3300012944\|Ga0137410_11931173	Not Available	523	Open in IMG/M
3300012948\|Ga0126375_10326836	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → unclassified Afipia → Afipia sp. Root123D2	1077	Open in IMG/M
3300012971\|Ga0126369_12476079	Not Available	604	Open in IMG/M
3300015052\|Ga0137411_1350634	Not Available	4966	Open in IMG/M
3300015241\|Ga0137418_10314752	Not Available	1304	Open in IMG/M
3300015241\|Ga0137418_10974398	Not Available	616	Open in IMG/M
3300015245\|Ga0137409_10171437	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1972	Open in IMG/M
3300015245\|Ga0137409_10330415	Not Available	1333	Open in IMG/M
3300015245\|Ga0137409_10330415	Not Available	1333	Open in IMG/M
3300015245\|Ga0137409_10627635	Not Available	906	Open in IMG/M
3300015264\|Ga0137403_10202111	All Organisms → cellular organisms → Bacteria → FCB group	1919	Open in IMG/M
3300015264\|Ga0137403_11081241	Not Available	648	Open in IMG/M
3300018031\|Ga0184634_10432281	Not Available	596	Open in IMG/M
3300018054\|Ga0184621_10011800	Not Available	2547	Open in IMG/M
3300018054\|Ga0184621_10181625	Not Available	756	Open in IMG/M
3300018066\|Ga0184617_1027753	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium → Rhizobium sp. P32RR-XVIII	1317	Open in IMG/M
3300018072\|Ga0184635_10243904	Not Available	712	Open in IMG/M
3300018072\|Ga0184635_10351113	Not Available	566	Open in IMG/M
3300018075\|Ga0184632_10374921	Not Available	603	Open in IMG/M
3300018081\|Ga0184625_10376606	Not Available	735	Open in IMG/M
3300019789\|Ga0137408_1007518	Not Available	1147	Open in IMG/M
3300020170\|Ga0179594_10014072	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2304	Open in IMG/M
3300020170\|Ga0179594_10197450	Not Available	753	Open in IMG/M
3300020170\|Ga0179594_10395993	Not Available	524	Open in IMG/M
3300021080\|Ga0210382_10509822	Not Available	533	Open in IMG/M
3300021086\|Ga0179596_10725233	Not Available	503	Open in IMG/M
3300022694\|Ga0222623_10192400	Not Available	792	Open in IMG/M
3300022756\|Ga0222622_10966740	Not Available	625	Open in IMG/M
3300022756\|Ga0222622_11328227	Not Available	529	Open in IMG/M
3300026555\|Ga0179593_1188339	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2661	Open in IMG/M
3300027512\|Ga0209179_1118332	Not Available	591	Open in IMG/M
3300027616\|Ga0209106_1040827	Not Available	1031	Open in IMG/M
3300027903\|Ga0209488_10001164	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	22458	Open in IMG/M
3300027903\|Ga0209488_10012292	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6263	Open in IMG/M
3300028536\|Ga0137415_10176465	Not Available	1964	Open in IMG/M
3300028536\|Ga0137415_10201348	All Organisms → cellular organisms → Bacteria	1811	Open in IMG/M
3300028536\|Ga0137415_10268983	Not Available	1511	Open in IMG/M
3300028793\|Ga0307299_10070291	Not Available	1298	Open in IMG/M
3300028876\|Ga0307286_10126758	Not Available	907	Open in IMG/M
3300030903\|Ga0308206_1055159	Not Available	800	Open in IMG/M
3300031184\|Ga0307499_10054507	Not Available	990	Open in IMG/M
3300031184\|Ga0307499_10333786	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300031198\|Ga0307500_10188594	Not Available	609	Open in IMG/M
3300031720\|Ga0307469_11061204	Not Available	759	Open in IMG/M
3300031740\|Ga0307468_100212728	Not Available	1321	Open in IMG/M
3300031740\|Ga0307468_101732443	Not Available	589	Open in IMG/M
3300032180\|Ga0307471_102211330	Not Available	693	Open in IMG/M
3300032180\|Ga0307471_103125380	Not Available	587	Open in IMG/M
3300032205\|Ga0307472_101071507	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium genosp. L	760	Open in IMG/M
3300033433\|Ga0326726_11358623	All Organisms → cellular organisms → Bacteria → Proteobacteria	691	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.56%
Host-Associated	Host-Associated	4.44%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.93%
Aquatic	Environmental → Aquatic	9.63%
Plants	Host-Associated → Plants	4.44%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	85.19%
Sediment	Environmental → Aquatic → Sediment	8.15%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.44%
Freshwater	Environmental → Aquatic → Freshwater	1.48%
Peat	Environmental → Terrestrial → Peat	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	73.33%
Loam	Environmental → Terrestrial → Soil → Loam	11.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	8.15%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.70%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.74%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.74%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.74%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	66.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	8.15%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.44%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.70%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.22%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.74%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.74%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	48.89%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	13.33%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	10.37%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	5.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.44%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.44%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.70%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.22%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.48%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.48%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.74%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.74%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.74%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.74%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015052	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300027512	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes)	Environmental	Open in IMG/M
3300027616	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300030903	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12053J15887_102364513	3300001661	Forest Soil	VRQKGSGIEGWCMAKATKTKPRDRLVRWRVSLIKGTPPKFIDFAYAPDAQAAERRVAKEHKISSTLRSRLMAIRDDL*
Ga0066395_103674191	3300004633	Tropical Forest Soil	MANGTYVAAMVKSNKTKPRERLFRWRVSLITKTPARFVDFTFAPDAETAEKQVAEEHKIPDTLRGRLVAIREDW*
Ga0066388_1010552803	3300005332	Tropical Forest Soil	LAKAKKTKPRERLFEWRVSLIKGRPAKLIGYAHAPDAKAAEDIVAEEHKIPNTLRDRLVRSAKN*
Ga0066388_1020543382	3300005332	Tropical Forest Soil	MAKAKKTKPRDQLPRWRVSLIKGTPAKFIDFTLAPDAETAEKQVAEQHKIPDTLRDRLVAVREDW*
Ga0066388_1030645102	3300005332	Tropical Forest Soil	MAKAKKTKPRELIRWRVSLMKATPAKFIDFVEAPDAKTAEEIAAKEHNISATLRDRLVAIREDW*
Ga0066388_1061251962	3300005332	Tropical Forest Soil	VCAHGQSLKTKPRERLPRWRVSLIKGTPAKFIDYTLAPDAETAEKQVAEAHDIREDLRNRLVAIREDL*
Ga0066388_1063686482	3300005332	Tropical Forest Soil	MAKAKKTKPRDRLVRWRVSLIKGTPAKFIDFVEAPDAKTAEDIAAKQHKISDTLRNRLVAIREDW*
Ga0066700_104023131	3300005559	Soil	MAKAKKTKPREQLVRWRVSLITATPAKFIDFTMAPDAETAQEQVAEAYDIGDELRHRLVAIRDEL*
Ga0066905_1001656551	3300005713	Tropical Forest Soil	MPTKKPKEKLIRWRVSLLGKTPARFIDYTLAPDAETAEVQVAEAHDISDTLRDRLVAIREDL*
Ga0066905_1020383491	3300005713	Tropical Forest Soil	MAKAKKTKPSERLIRWRVSLITATPAKFVDFTLAPDAETAERQVAEAHDISETLRDRLVAVRDEL*
Ga0066903_1001607015	3300005764	Tropical Forest Soil	MAKAKKAKPREHLVRWRVSLITKTPARFVDFTLAPDAETAERQVAEAHEIREDLRDRLVAIRED*
Ga0066903_1004106143	3300005764	Tropical Forest Soil	VAKARKTKPREQIRWRVSLMTKTPARFIDFAYAPDAETAEKRVAEEHEISKTLRNKLIAIRDDL*
Ga0066903_1043081641	3300005764	Tropical Forest Soil	MAKAKKTKPRENLVRWRVSLIKGSPAKFVDFTLAPDAATAERQVAEEHKISETLRDRLVAIRED*
Ga0066903_1050483413	3300005764	Tropical Forest Soil	MANGTEGWCMAKAKKSKPREQIRWRVSLMTKTPARFIDFAYAPDAETAEKQVAKEHEISDTLRNKLVAIRDDL*
Ga0066903_1065385552	3300005764	Tropical Forest Soil	MAKAKKTKPRDRLVRWRVSLIKGTPAKFIDFVEAPDAKTAEDIAAREHKIRDTLRDRLVAIREDW*
Ga0066903_1076927131	3300005764	Tropical Forest Soil	MAKAKTSKPRERLVRWRVSLIKGTPAKFIDYVEAPDAKTAEDIAAKEHRISDALRDRLVAIREE*
Ga0075433_114624242	3300006852	Populus Rhizosphere	MAKAKKTKPRELIRWRVSLITKTPAKFIDFVEAPDAATAEKQVAEGHDIPDTLRDRLVAIREDW*
Ga0075433_115731842	3300006852	Populus Rhizosphere	KAKKTKPRDQIRWRVSLMTKTPARFIDFAYAPSAEAAEKQVAEEHEISETLRHRLVAIREDL*
Ga0075424_1013152201	3300006904	Populus Rhizosphere	VRMAKAKKTKPRELIRWRVSLITKTPAKFIDFVEAPDAATAEKQVAEGHDIPDTLRDRLVAIREDW*
Ga0075424_1023606842	3300006904	Populus Rhizosphere	MAKAKKTKSRELIRWRVSLITKTPAKFIDFVEAPDAATAEKQVAEEHEIPDTL
Ga0075424_1024394222	3300006904	Populus Rhizosphere	MANGTDGWCMAKAKKTKPRDQIRWRVSLMTKTPARFIDFAYAPSAEAAEKQVAEEHEISETLRHRLVAIREDL*
Ga0099795_100095923	3300007788	Vadose Zone Soil	MAKAKKTKPREHLIGWRVSLITGTPAKFIDFTLAPDAETAERQVAEAHGIGDKLRNRLIAIREDW*
Ga0099795_100173633	3300007788	Vadose Zone Soil	MAKARKTKPRDRLVRWRVSLITRTPAGFVDFAYAPDAQAAERRVAREHKISGTLRHRLVAIRDEL*
Ga0099795_100243542	3300007788	Vadose Zone Soil	MAKAKKTKPREHLIRWRASLITATPAKFIDFTMAPDAETAEEQVAEAHDISDELRPRLVAVREDLRQTVKSRG*
Ga0099795_100258312	3300007788	Vadose Zone Soil	MAKAKKTKPREHVIRWRVSLIKGTPAKFIDFAYAPDAKTAEKQVAEEHKISETLRDRLVAIREDH*
Ga0066710_1007794833	3300009012	Grasslands Soil	MAKAKKAKPRGKLPRWRVSLITATPAKFVDFTLAPDAETAEKQVAEAHDIREDLRDRLVAIREEL
Ga0066709_1005326152	3300009137	Grasslands Soil	MAKAKKAKPRGKLPRWRVSLITATPAKFVDFTLAPDAETAEKQVAEAHDIREDLRDRLVAIREEL*
Ga0099792_107773492	3300009143	Vadose Zone Soil	SGSVTMARLGPECAYGQSQKTKPRDLPRWRVSLITKTPAKFIDFTLAPDAATAEKQVAEVHKISETLRDRLVAIREDL*
Ga0099792_110279431	3300009143	Vadose Zone Soil	KRVRQVGRARPQSERMAKAKKTKPRDHLTRWRVSLITATPAKFVEFTLAPDAYDVGDELRHRLMAIRDDL*
Ga0126380_108634141	3300010043	Tropical Forest Soil	REQIRWRVSLMTKTPARFIDFAYAPDAETAEKQVAEEHEISETLRNKLVAIRDDL*
Ga0126380_118404752	3300010043	Tropical Forest Soil	MANGTKGWCMAKAKKTKPREQIRWRVSLMTKTPARFIDFAYAPDADTAEKQVAEEHEISEALRNKLVAIRDDL*
Ga0126384_105049921	3300010046	Tropical Forest Soil	MRKKPSPKPSKKLPRWRGSLITASPARFIDFTLAPDAETVEKQVTEAHDISDNLRDRLVA
Ga0126384_105642053	3300010046	Tropical Forest Soil	MAKAKKTKPRDQLPRWRVSLIKGTPAKFIDFTLAPDAETAEKQVAEEHKIPDTLRDRLVAIREDL*
Ga0126382_106144951	3300010047	Tropical Forest Soil	MAKAKKTKPSERLIRWRVSLITATPAKFVDFTLAPDAETAERQVVEAHDISETLRDRLVAVRDEL*
Ga0126382_124547921	3300010047	Tropical Forest Soil	MAKAKKIKPNEHLVRWRVSLITSTPVKFGDYTLAPDAETAEKQVAEAYRISDRLRDRLVAVKDET*
Ga0127503_100868463	3300010154	Soil	TKCERMAKAITRPRDLIRWRVSLITATPAKFIDFTMAPDAETAEEQVAEAYDIGDELRHRLMAIRDDL*
Ga0099796_103859622	3300010159	Vadose Zone Soil	KKTKPREHVIRWRVSLIKGTPAKFIDFAYAPDAKTAEKQVAEEHKIGATLWDRMVAIREDH*
Ga0126370_119851822	3300010358	Tropical Forest Soil	VASGTDGVRMVKAKKTKPRERLPRWRLSLIKGTPAKFIDYTLAPDAETAEKQVAEEHKIPDTLRDRLVAIREDW*
Ga0126376_119276102	3300010359	Tropical Forest Soil	KPRDRLVQWRVSLITKTPAKFVDFTLAPDAETAERQVAEAHEIREDLRDRLVAIRED*
Ga0126372_102106603	3300010360	Tropical Forest Soil	MAKAKKTKPRDRLVRWRVSLIKGTPAKFIDYVEAPDAKTAEDIAAKEHRISDALRDRLVAIREE*
Ga0126372_103607953	3300010360	Tropical Forest Soil	MAKAKKTKPRDQLPRWRVSLIKGTPAKFIDFTLAPDAETAEKQVAEQHKIPDTLRDRLVAVR
Ga0126372_113315612	3300010360	Tropical Forest Soil	MAKARKTKPREQIRWRVSLMTKTPARFIDFAYAPDAQTAERQVAEEHEISETLRNKLVAIRSLGSGSRTIGR*
Ga0126372_114925572	3300010360	Tropical Forest Soil	VASGSGTDGVRMAKAKKAKPRERLVEWRVSLIKGTPAKFIGYVHAPDAKTAEDIAAKEHRIPDTLHDRLVAVREGG*
Ga0126377_104714312	3300010362	Tropical Forest Soil	VRRFERVSSVAGDTDGVRMARAKKSKPRERLPRWRVSLIKGTPAKFIDYVLAPDAETAEKQVAEEHRIPDMLRDRLVAIREDL*
Ga0126377_105059601	3300010362	Tropical Forest Soil	VANGTEGCAVAKAKKVKPREQIRWRVSLMTKTPARFIDFAYAPDAETAEKQVAEEHEISETLRNKLVAIRDDL*
Ga0126377_120231921	3300010362	Tropical Forest Soil	MAKAKKTQPRERLFRWRVSLIKGTPAKFIDFALAPDAATAEKQVAEEHKISDTLRDRLVAIRDKSF*
Ga0126377_128738581	3300010362	Tropical Forest Soil	MAKAKKTKPRDQLPRWRVSLIKGTPAKFIDFTLAPDAETAEKQVAEEHKIPDTLRDRLVAIREK*
Ga0137383_107073922	3300012199	Vadose Zone Soil	MANGTDRCCMAKAKKTKPRDHLVRWRVSLITATPAKFIDFTMAPDAETAEEQVAEAYDIGDELPHRLMAIRDDL*
Ga0137380_103712801	3300012206	Vadose Zone Soil	MAKAKKTKPRDRLVRWRVSLIKGTPAKFIDFAYAPDAATAEKQVAEEHEISEALRDRLVAIREDH*
Ga0137381_101376381	3300012207	Vadose Zone Soil	MAKAKKTKPRDRLVRWRVSLMIKGTPAKFIDFVEAPDAETAEKQVAKEHKISETLRDRLVAIREEW*
Ga0137381_101486753	3300012207	Vadose Zone Soil	MAKAKKTKPREHLIRWRVSLIKGTPAKFIDFAYAPDAATAEKQVAEEHEISEALRDRLVAIREDH*
Ga0137381_110446641	3300012207	Vadose Zone Soil	MAKAKKTKPRDHLVRWRVSLITATPAKFIDFTMAPDAETAEEQVAEAYDIGDELPHRLMAIRDDL*
Ga0137376_104797562	3300012208	Vadose Zone Soil	MAKAKTKPREHVIRWRVSLIKGTPAKFIDFAYAPDAKTAEKQVAEEHKISETLRDRLVAIREDH*
Ga0137379_117594532	3300012209	Vadose Zone Soil	MANGIDECCMARAKKTKPREHLIRWRVSLIKGTPAKFIDFAYAPDAATAEKQVAEEHEISEALRDRLVAIREDH*
Ga0137378_117379632	3300012210	Vadose Zone Soil	RDNLVRWRVSLIKGTPAKFIDFAMAPDAETAQEQVAEEHKISETLRDRLVAIRED*
Ga0137377_115134431	3300012211	Vadose Zone Soil	DRLVRWRVSLMIKGTPAKFIDFVEAPDAETAEKQVAKEHKISETLRDRLVAIREEW*
Ga0137387_100352581	3300012349	Vadose Zone Soil	MAKARKTKPRDRLVRWRVSLITRSPAGFVDFAYAPDAQAAERQVAREHKISGTLRNRLVAIRDG
Ga0137385_106117381	3300012359	Vadose Zone Soil	HLIRWRVSLITATPAKFIDFTMAPDAETAQEQVAEAYDIGDELRHRLVAIRDEL*
Ga0150984_1220388311	3300012469	Avena Fatua Rhizosphere	VRQANGTGEWWRMAQIKKTKPRDNLVRWRVSLITATPAKFIDFTMAPDAETAEEQVAVAHDISAELRPRLIAVREDLRHTVKSRG*
Ga0137398_101120242	3300012683	Vadose Zone Soil	MAKAKKTKPREHVIRWRVSLIKGTPAKFIDFAYAPDAKTAEKQVAEEHKISETRRDRLVAIREDH*
Ga0137397_100014153	3300012685	Vadose Zone Soil	MAEAKKTKPREHLIRWRVSLITKTPAKFIDFAYAPDAATAEKQVAEEHKISDTLRDRLVAIREDH*
Ga0137397_100064285	3300012685	Vadose Zone Soil	MANGTDGWCMAKAKNTKPRDLIRWRVSLIAATPAKFIEFTMAPDAETAEDQVAEAYDIGDDLRHRLIAIREDL*
Ga0137397_100297638	3300012685	Vadose Zone Soil	MAKAKKTKPRDRLVRWRVSLIRKTPPRFVDFAYAPDAQAAERQVAREHKISGTLRNRLVAIREEL*
Ga0137397_101202834	3300012685	Vadose Zone Soil	MAKPKKIKPRGLPWWRVSLITATPAKFIDFTLAPDAATAEAQVAEEHEISDTLRDRLVAIREE*
Ga0137397_101881193	3300012685	Vadose Zone Soil	MAQRHRWTVHGQSQETKPRDHLIRWRVSLITATPAKFIDFTMAPDAETAEEQVAEAYDIGDELRHRLMAIRDDL*
Ga0137397_104302322	3300012685	Vadose Zone Soil	MAKAKKSKPRERLVWWRVSLITKTPAKFIDFTLAPDAATGEKQLAEAHQISDTLRDRLVAIRDEL*
Ga0137397_105342171	3300012685	Vadose Zone Soil	MAKAKKTKPRELPRWRVSLITKTPAKFIDFTLAPDAETAEKQVAEAHDISETLRDRLVAIREDW*
Ga0137397_107601551	3300012685	Vadose Zone Soil	MAKARKTKPRDRLVRWRVSLITKTPAGFVDFAYAPDAQAAERRVAREHKISGTLRNRLVAIRDKL*
Ga0137397_109347501	3300012685	Vadose Zone Soil	MAKAKKTKPRQQLVRWRVSLIKGTPAKFIDFVEAPDAKTAEDTAAKEHKIPDTLRDRLVALREDL*
Ga0137413_106238743	3300012924	Vadose Zone Soil	MASGTDGWCMAKAKKTKPRERLVRWRVSLITKTPARFIDFAYASDAATAEKQVAEEHKISETLRDRLVAIREDH*
Ga0137419_101180132	3300012925	Vadose Zone Soil	MAKAKKTKPREHLIRWRASLITATPAKFIDFTMAPDAETAEEQVAEAHDISDELRPRLVAVREE*
Ga0137416_108873321	3300012927	Vadose Zone Soil	KPRERLVRWRVSLITKTPAGFVDFAYAPDAQAAERRVAREHKISGTLRNRLVAIRDEL*
Ga0137416_122149371	3300012927	Vadose Zone Soil	KTKPREHLIRWRVSLIKGTPAKFIDFAYAPDAATAEQQVAEEHEISEALRDRLVAIREDH
Ga0137404_105997561	3300012929	Vadose Zone Soil	MANGTDGWCMAKAKKTKPREHLIRWRVSLITATPAKFVDFTMAPDAETAEEQVAEAHYISVELRSRLVAVREDLRQSFKSRG*
Ga0137407_101333741	3300012930	Vadose Zone Soil	MASGTPREHLFRWRVSLITATPAKFVDFTLAPDAETAERQVAEAHEISDTLRGRLVAARED*
Ga0137407_104060113	3300012930	Vadose Zone Soil	MAKARKTKPRDLIRWRVSLITATPAKFIDFTMAPDAETAEEQVAETYDIGDVLGHRLMAIRDDL*
Ga0137407_107626741	3300012930	Vadose Zone Soil	TKPRDRLLRWRVSLMKATPAKFIDFVEAPDAKTAEDIAAKEHKIPDTLRDRLVAIREDW*
Ga0137407_108504251	3300012930	Vadose Zone Soil	MAKAKKTKPRNHLVRWRVSLITATLPSSSTFTMAPDAETAEEQVAEAYDIGDELRHRLMAIRDDL*
Ga0137407_114177552	3300012930	Vadose Zone Soil	RMAKGRKTKPRERLVRWRVIKGTPAKFVDFAYAPDAQAAERRVAKEHNIRDTLRSRLVAIRDEL*
Ga0137407_115058322	3300012930	Vadose Zone Soil	MAKAKKTKPRELRWRVSLIKGTPAKFIDFAYAPDAKTAEKQVAEERKISEALRDRLVAIREEW*
Ga0137407_116141692	3300012930	Vadose Zone Soil	MAGRDRECVVANAKKSKTREHLFRWRVSLITATPAKFVDITMAPNAETAERQVAEAHEISDVLRNRLVAVREDR*
Ga0137407_116204511	3300012930	Vadose Zone Soil	MANGTYGARMAKAMKTKPRDRLLRWRVSLIKGTPARFIDFAHAPDAETAEKQVAEEHKIPDTLRDRLAAIREDW*
Ga0137407_117726711	3300012930	Vadose Zone Soil	MANGTDGWCMAKAKKTKPRDRLVRWRVSLITKTPAKFVDYVEAVDAKSAEDIAAKEHKISDTLRDRLVAIREDW*
Ga0137407_122743901	3300012930	Vadose Zone Soil	MAKAKKTKPRDLIRWRVSLITATPANSSTVTMAPDAETAEAQVAEAHDISDTLRDRLVPIWEDW*
Ga0137410_101395185	3300012944	Vadose Zone Soil	RVLSRWPGRAQSERIAKAKSTKPRDLIRWRVSLITATPAKFIDFTMAPDAETAEAQVAEAYDISDELRHRLMAIRDDL*
Ga0137410_119311731	3300012944	Vadose Zone Soil	MAKAKKTKPRERLFEWRVSFIKGTPAKFIDFAYAPDAATAERQVAEAHEIPDTLRDRLVAIREAL*
Ga0126375_103268361	3300012948	Tropical Forest Soil	MAKAKKTKPRDRLVRWRVSLIRGTPAKFIDYALAPDTATAEKQVAEAHDIREDLRSRLVAIREEL
Ga0126369_124760792	3300012971	Tropical Forest Soil	MAKAKKGKPRDRLVRWRVSLIKGTPAKFIDYVQAPDPKSAEDIAAKEHKIPDTLRDRLVAIREDW*
Ga0137411_13506345	3300015052	Vadose Zone Soil	MAKSQEDQPRELIRWRVSLITATPAKFIDFTLAPDAATAEPQVAEAHEIPDTLRDRLLAIRED*
Ga0137418_103147522	3300015241	Vadose Zone Soil	LWSGARQRDYIYPMAKAKKTKPREHLIGWRVSLITGTPAKFIDFTLAPDAETAERQVAEAHGIGDKLRNRLIAIREDW*
Ga0137418_109743981	3300015241	Vadose Zone Soil	DGQAVPRVCCMAKAKKTKPREHVIRWRVSLIKGTPAKFIDFAYAPDAKTAEKQVAEEHKISETLRDRLVAIREDH*
Ga0137409_101714372	3300015245	Vadose Zone Soil	MDKAKKSKPRERLVWWRVSLITKTPAKFIDFTLAPDAATGEKQLAEAHQISDTLRDRLVAIRDEL*
Ga0137409_103304152	3300015245	Vadose Zone Soil	MAKARKTKPRDRLVRWRVSLITKTPAGFVDFAYAPDAQAAERRVAREHKIGGTLRHRLVAIRDEL*
Ga0137409_103304153	3300015245	Vadose Zone Soil	GAELPRWRVSLITATPAKFVDFTLAPDAETAERQVAEAHEISETLRDRLVAIREDW*
Ga0137409_106276352	3300015245	Vadose Zone Soil	MANGTEGWCMAKAKKTKPRHHLIRWRVSLITATPAKFVDFTMAPDAETAEEQVAEAHDISDALRNRLVAIREDF*
Ga0137403_102021113	3300015264	Vadose Zone Soil	MANGTDGWCMAKAKKTKPREHLIRWRVSLITATPAKFVDFTMAPDAETAEEQVAEAHEISVELRPRFVAVREDLRQSSKSRG*
Ga0137403_110812411	3300015264	Vadose Zone Soil	MASGTPREHLFRWRVSLITATITATPAKFVDFTLAPDAETAERQVAEAHEISDTLRGRLVAARED*
Ga0184634_104322812	3300018031	Groundwater Sediment	MAKAKSTKPRDLIRWLVSLITATPAKFIDFTMAPDAVTAEEQVAEAYDIGVDLRRRLVAVREDL
Ga0184621_100118003	3300018054	Groundwater Sediment	MAKAKSTKPRDLIRWLVSLITATPAKFIDFTMAPDAVTAEEQLAETYDIGVDLRHRLIAIREDL
Ga0184621_101816251	3300018054	Groundwater Sediment	MANGTDGWCMAKAKKTKPREHLIRWRVSLITATPAKFVDFTMAPDAETAEEQVAEAHDISVELRSRLVAVREDLRQSFKSRGQ
Ga0184617_10277532	3300018066	Groundwater Sediment	MAKAKKTKPRDHLIRWRVSLITATPAKFVDFTMAPDAETAEEQVAEAHDISVELRSRLVAVREDLRQSFKSRGQ
Ga0184635_102439042	3300018072	Groundwater Sediment	GTESVGMAKAKKTKPRELPRWRVSLSTKTPAKFVDFTLAPDAETAEKQVAEAHDISETLRDRLLAMRED
Ga0184635_103511132	3300018072	Groundwater Sediment	AAAPSRRPDGPQSERMAKAKSTKPRDLIRWLVSLITATPAKFIDFTMAPDAVTAEEQVAEAYDIGVDLRRRLVAVREDL
Ga0184632_103749211	3300018075	Groundwater Sediment	SGTQGCCMSEAKKTKARDHMVRRRVSLIKGTPAKFIDFAYASDAATAEQQVAKEHTRSATRCAIA
Ga0184625_103766061	3300018081	Groundwater Sediment	MAKTKKTKPREHLIRWRVSLITGTPAKFVDFALAPDAETAERQVAEAHDISDTLRDRLVAVREEL
Ga0137408_10075182	3300019789	Vadose Zone Soil	MAKARKTKPRDLIRWRVSLITATPAKFIDFTMAPDAETAEEQVAETYDIGDVLGHRLMAIRDDL
Ga0179594_100140722	3300020170	Vadose Zone Soil	LPASPHRRHDDEAAKPRDNLIRWRLSLLTKAPAKFIDFTMARDAATAEKQVAEAHDIGDEVRHGLVAIRDEL
Ga0179594_101974501	3300020170	Vadose Zone Soil	MAKAKKTKPREHLIRWRVSLIKGTPAKFIDFAYAPDAATAEQQVAEEREISEALRDRLVAIREDH
Ga0179594_103959932	3300020170	Vadose Zone Soil	MAKAKKTKPRDRLVRWRVSLITKTPAGFVDFAYAPDAQAAERQVAREHKISGALRNRLVAIRDG
Ga0210382_105098222	3300021080	Groundwater Sediment	GTDGWCMAKAKKTKPREHLIRWRVSLITATPAKFVDFTMAPDAETAEEQVAEAHDISVELRSRLVAVREDLRQSFKSRG
Ga0179596_107252331	3300021086	Vadose Zone Soil	GGTQSERMAKAKKTKPREHLIGWRVSLITGTPAKFIDFTLAPDAETAERQVAEAHGIGDKLRNRLIAIREDW
Ga0222623_101924003	3300022694	Groundwater Sediment	MANGTDEWCMAKAKKTKLRDRLVRWRVSLIKGTPAKFIDFAYAPDAQAAERRVAKEHKISSTLRSRLVAIRDDL
Ga0222622_109667402	3300022756	Groundwater Sediment	MAKAKKTKPRQHVVRWRVSLITATPAKFIEFTMAPDAETAEEQVAEAHDISDTLRDRLVAIRED
Ga0222622_113282272	3300022756	Groundwater Sediment	MAKAKKSKPRDRLVRWRVSLIRKTPATFIDFAYAPDAQAAERRVAREHKIGGTLRNRLVA
Ga0179593_11883392	3300026555	Vadose Zone Soil	MRVLSRWPGATLSVRMAKAKKTKPREHLIRWRASLITATPAKFIDFTMAPDAETAEEQVAEAHDISDELRPRLVAVREDLRQTVKSRG
Ga0209179_11183322	3300027512	Vadose Zone Soil	MAKAKKTKPREHLIGWRVSLITGTPAKFIDFTLAPDAETAERQVAEAHGIGDKLRNRLIAIREDW
Ga0209106_10408272	3300027616	Forest Soil	MAKAKKTKPREHVIRWRVSLIKGTPAKFIDFAYAPDAKTAEKQVAEEHKISETLRDRLVAIREDH
Ga0209488_1000116416	3300027903	Vadose Zone Soil	MAKARKTKPRDRLVRWRVSLITRTPAGFVDFAYAPDAQAAERRVAREHKISGTLRHRLVAIRDEL
Ga0209488_1001229210	3300027903	Vadose Zone Soil	LMRVLSRWPGATLSVRMAKAKKTKPREHLIRWRASLITATPAKFIDFTMAPDAETAEEQVAEAHDISDELRPRLVAVREDLRQTVKSRG
Ga0137415_101764652	3300028536	Vadose Zone Soil	MAKGRKTKPRERLVRWRVSLIKGPPAKFIDFAYAPDAQAAERRVAKEHNIRDTLRSRLVAIRDEL
Ga0137415_102013484	3300028536	Vadose Zone Soil	MAKARKTKPRDRLVRWRVSLITKTPAGFVDFAYAPDAQAAERRVAREHKISGTLRNRLVAIRDEL
Ga0137415_102689831	3300028536	Vadose Zone Soil	VCVSGHGTDGWCMAKAKKTKPREHLIRWRVSLIKGTPAKFIDFAYAPDAATAEQQVAEEHEISEALRDRLVAIREDH
Ga0307299_100702911	3300028793	Soil	VAKARKTKPRDRLVRWRVSLIKSTPAKFIDFAYAPDAQAAERRVAKEHKISSTLRSRLVAIRDDL
Ga0307286_101267582	3300028876	Soil	VSGVRQTANDTDRRCMAKAQNIKPRDLIRWRVSLITATPAKFIDFTMAPDAETAEDQVAEAYDIGDDLRHGLIAIREDL
Ga0308206_10551591	3300030903	Soil	MAKATKTKPRDRLVRWRVSLIKGTPPKFIDFAYAPDAQAAERRVAKEHKISSTLRSRLVAIRDDL
Ga0307499_100545073	3300031184	Soil	SNGQRTVRCYMAKAKKTKPRELIRWRVSLITATPAKFVDFTLAPDAATAEEQVAEAHEIPETLRDRLVAIRED
Ga0307499_103337861	3300031184	Soil	LVRWRVSLIRKTPATFIDFAYAPDAQAAERRVAREHKISGTLRNRLVAIREDWWTSR
Ga0307500_101885941	3300031198	Soil	MAKAKKTKPRDNLIRWRVSLITKTPAKFVDFAYAPDAAAAEKRVAEEHEISETLRDRLVAIREDL
Ga0307469_110612042	3300031720	Hardwood Forest Soil	LKVRRFQRVVRASGTDGVRMAKARKAKPGEQIRWRVSLITKTPAKFIDYALAPDAETAEKQVAEEHEIPDTLRDRLVAIREN
Ga0307468_1002127282	3300031740	Hardwood Forest Soil	MAKAKKTKPRERLFRWRVSLLTKTPARFVDFTLAPDQETAEEQVAEAHKISETLRHKLVAIWDEL
Ga0307468_1017324431	3300031740	Hardwood Forest Soil	MANGTEGWCMAKAKKTKPREQIRWRVSLITKTPARFIDFAYAPDAETAEKQVAEEYEISELLRDRLVAIRDDL
Ga0307471_1022113301	3300032180	Hardwood Forest Soil	MAKAKKIKPREQIRWRVSLITKTPAKFIGFALAPDAETAEKQVAEEYEISETLRDRLVAIRDDR
Ga0307471_1031253802	3300032180	Hardwood Forest Soil	MANGTDGWSMAKTKKTKPREHVVRWRVSLITATPAKFIDFTMAPDAETAEEQVAEAHDISDTLRDRLVAIRED
Ga0307472_1010715071	3300032205	Hardwood Forest Soil	MARRTQGVRVARAKKSKPRDRLVRWRVLLIKKTPAKFVDFAYAPDAQSAERTVAKEHSISGTLRNRLVAIREDW
Ga0326726_113586231	3300033433	Peat Soil	RGTQGRCMAKAKRSKPREHLIRWRVSLMTKTPARFIDFAYAPDAQAAERKVAKEHNIRDTLRNKLVALREDL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F057950

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences