NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F057975

Metagenome / Metatranscriptome Family F057975

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F057975
Family Type Metagenome / Metatranscriptome
Number of Sequences 135
Average Sequence Length 71 residues
Representative Sequence MLTLMHQNANVHPHPFSSLEALLAEPFPHTPQEMLQLEQRLSTAAAQIADQILLVQLTRAHEDEHFVRQA
Number of Associated Samples 110
Number of Associated Scaffolds 135

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 93.80 %
% of genes near scaffold ends (potentially truncated) 80.00 %
% of genes from short scaffolds (< 2000 bps) 91.11 %
Associated GOLD sequencing projects 106
AlphaFold2 3D model prediction Yes
3D model pTM-score0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (54.074 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(31.111 % of family members)
Environment Ontology (ENVO) Unclassified
(33.333 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(46.667 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 46.94%    β-sheet: 0.00%    Coil/Unstructured: 53.06%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.46
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 135 Family Scaffolds
PF01609DDE_Tnp_1 2.22
PF07592DDE_Tnp_ISAZ013 2.22
PF00106adh_short 1.48
PF13359DDE_Tnp_4 0.74
PF05239PRC 0.74
PF00078RVT_1 0.74
PF13482RNase_H_2 0.74
PF13610DDE_Tnp_IS240 0.74
PF01738DLH 0.74
PF01656CbiA 0.74
PF01402RHH_1 0.74
PF13565HTH_32 0.74
PF04986Y2_Tnp 0.74
PF09335SNARE_assoc 0.74
PF01315Ald_Xan_dh_C 0.74
PF00589Phage_integrase 0.74
PF00067p450 0.74
PF01408GFO_IDH_MocA 0.74
PF13005zf-IS66 0.74
PF13551HTH_29 0.74
PF04909Amidohydro_2 0.74
PF01526DDE_Tnp_Tn3 0.74
PF13358DDE_3 0.74
PF12762DDE_Tnp_IS1595 0.74
PF13683rve_3 0.74
PF08814XisH 0.74
PF11026DUF2721 0.74
PF07883Cupin_2 0.74
PF01548DEDD_Tnp_IS110 0.74
PF13340DUF4096 0.74
PF07690MFS_1 0.74
PF01274Malate_synthase 0.74
PF10042DUF2278 0.74
PF03400DDE_Tnp_IS1 0.74
PF01797Y1_Tnp 0.74

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 135 Family Scaffolds
COG5659SRSO17 transposaseMobilome: prophages, transposons [X] 2.22
COG3039Transposase and inactivated derivatives, IS5 familyMobilome: prophages, transposons [X] 2.22
COG3293TransposaseMobilome: prophages, transposons [X] 2.22
COG3385IS4 transposase InsGMobilome: prophages, transposons [X] 2.22
COG5421TransposaseMobilome: prophages, transposons [X] 2.22
COG5433Predicted transposase YbfD/YdcC associated with H repeatsMobilome: prophages, transposons [X] 2.22
COG0398Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 familyFunction unknown [S] 0.74
COG0586Membrane integrity protein DedA, putative transporter, DedA/Tvp38 familyCell wall/membrane/envelope biogenesis [M] 0.74
COG1238Uncharacterized membrane protein YqaA, VTT domainFunction unknown [S] 0.74
COG1662Transposase and inactivated derivatives, IS1 familyMobilome: prophages, transposons [X] 0.74
COG1943REP element-mobilizing transposase RayTMobilome: prophages, transposons [X] 0.74
COG2124Cytochrome P450Defense mechanisms [V] 0.74
COG2225Malate synthaseEnergy production and conversion [C] 0.74
COG3547TransposaseMobilome: prophages, transposons [X] 0.74
COG4644Transposase and inactivated derivatives, TnpA familyMobilome: prophages, transposons [X] 0.74

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A54.07 %
All OrganismsrootAll Organisms45.93 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000559|F14TC_101153524Not Available1834Open in IMG/M
3300002908|JGI25382J43887_10260465Not Available790Open in IMG/M
3300005174|Ga0066680_10718652All Organisms → cellular organisms → Bacteria611Open in IMG/M
3300005180|Ga0066685_10380093All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Spirurina → Spiruromorpha → Filarioidea → Onchocercidae → Wuchereria → Wuchereria bancrofti981Open in IMG/M
3300005181|Ga0066678_10756827All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Crenotrichaceae → Crenothrix → Crenothrix polyspora645Open in IMG/M
3300005184|Ga0066671_10917591Not Available554Open in IMG/M
3300005332|Ga0066388_107236911All Organisms → cellular organisms → Bacteria558Open in IMG/M
3300005332|Ga0066388_107264793Not Available557Open in IMG/M
3300005445|Ga0070708_101732936Not Available580Open in IMG/M
3300005467|Ga0070706_100148137All Organisms → cellular organisms → Bacteria2191Open in IMG/M
3300005536|Ga0070697_100522900All Organisms → cellular organisms → Bacteria1039Open in IMG/M
3300005553|Ga0066695_10659150All Organisms → cellular organisms → Bacteria → Proteobacteria619Open in IMG/M
3300005554|Ga0066661_10461415All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria774Open in IMG/M
3300005555|Ga0066692_10572530All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria712Open in IMG/M
3300005557|Ga0066704_10683156All Organisms → cellular organisms → Bacteria649Open in IMG/M
3300005559|Ga0066700_11011409Not Available546Open in IMG/M
3300005563|Ga0068855_102053689Not Available576Open in IMG/M
3300005615|Ga0070702_101029397All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Candidatus Magnetoglobus → Candidatus Magnetoglobus multicellularis654Open in IMG/M
3300005764|Ga0066903_101295416All Organisms → cellular organisms → Bacteria1361Open in IMG/M
3300006806|Ga0079220_11623259Not Available561Open in IMG/M
3300006846|Ga0075430_101743629Not Available511Open in IMG/M
3300006853|Ga0075420_101496560All Organisms → cellular organisms → Bacteria → Proteobacteria579Open in IMG/M
3300006871|Ga0075434_100216481All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Leptolyngbyaceae → Leptolyngbya → unclassified Leptolyngbya → Leptolyngbya sp.1935Open in IMG/M
3300006880|Ga0075429_100464979All Organisms → cellular organisms → Bacteria1108Open in IMG/M
3300006881|Ga0068865_101306304All Organisms → cellular organisms → Bacteria645Open in IMG/M
3300007255|Ga0099791_10334006All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Competibacteraceae → Candidatus Contendobacter725Open in IMG/M
3300007255|Ga0099791_10577630Not Available549Open in IMG/M
3300007258|Ga0099793_10548209All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6577Open in IMG/M
3300009012|Ga0066710_104605184Not Available515Open in IMG/M
3300009038|Ga0099829_10806246Not Available780Open in IMG/M
3300009038|Ga0099829_10836946Not Available764Open in IMG/M
3300009088|Ga0099830_11045646Not Available677Open in IMG/M
3300009090|Ga0099827_10662403All Organisms → cellular organisms → Bacteria901Open in IMG/M
3300009090|Ga0099827_11454430Not Available597Open in IMG/M
3300009098|Ga0105245_13227050Not Available505Open in IMG/M
3300009137|Ga0066709_103357274All Organisms → cellular organisms → Bacteria582Open in IMG/M
3300009143|Ga0099792_10863271All Organisms → cellular organisms → Bacteria597Open in IMG/M
3300009156|Ga0111538_12332784All Organisms → cellular organisms → Bacteria672Open in IMG/M
3300009553|Ga0105249_10108715All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria2618Open in IMG/M
3300009691|Ga0114944_1313767All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria648Open in IMG/M
3300009792|Ga0126374_10218772All Organisms → cellular organisms → Bacteria1219Open in IMG/M
3300009792|Ga0126374_10529999All Organisms → cellular organisms → Bacteria855Open in IMG/M
3300009792|Ga0126374_10568154Not Available831Open in IMG/M
3300009812|Ga0105067_1044269Not Available691Open in IMG/M
3300009818|Ga0105072_1109244Not Available560Open in IMG/M
3300010046|Ga0126384_10601358Not Available963Open in IMG/M
3300010046|Ga0126384_11949178Not Available561Open in IMG/M
3300010047|Ga0126382_11394820All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella palauensis639Open in IMG/M
3300010047|Ga0126382_11716869Not Available587Open in IMG/M
3300010361|Ga0126378_11168971Not Available868Open in IMG/M
3300010361|Ga0126378_11311973Not Available818Open in IMG/M
3300010361|Ga0126378_11939565Not Available671Open in IMG/M
3300010362|Ga0126377_12974210Not Available547Open in IMG/M
3300010366|Ga0126379_12893552Not Available574Open in IMG/M
3300010398|Ga0126383_12718919Not Available577Open in IMG/M
3300011269|Ga0137392_10332227All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium1258Open in IMG/M
3300011269|Ga0137392_10983192Not Available694Open in IMG/M
3300011270|Ga0137391_10621127Not Available904Open in IMG/M
3300011270|Ga0137391_11080187Not Available650Open in IMG/M
3300011270|Ga0137391_11178213All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4614Open in IMG/M
3300011270|Ga0137391_11389629Not Available548Open in IMG/M
3300012096|Ga0137389_10141325Not Available1961Open in IMG/M
3300012189|Ga0137388_10284495All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1512Open in IMG/M
3300012189|Ga0137388_11186327All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella palauensis701Open in IMG/M
3300012201|Ga0137365_10448256All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei950Open in IMG/M
3300012205|Ga0137362_11412283Not Available582Open in IMG/M
3300012205|Ga0137362_11653023Not Available527Open in IMG/M
3300012206|Ga0137380_10734733All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium855Open in IMG/M
3300012209|Ga0137379_10457192All Organisms → cellular organisms → Bacteria1185Open in IMG/M
3300012210|Ga0137378_10011679All Organisms → cellular organisms → Bacteria → Proteobacteria7612Open in IMG/M
3300012210|Ga0137378_10950507Not Available773Open in IMG/M
3300012212|Ga0150985_108360579All Organisms → cellular organisms → Bacteria1134Open in IMG/M
3300012285|Ga0137370_11046648Not Available501Open in IMG/M
3300012349|Ga0137387_10394324All Organisms → cellular organisms → Bacteria1004Open in IMG/M
3300012349|Ga0137387_10536508Not Available849Open in IMG/M
3300012350|Ga0137372_11097806Not Available546Open in IMG/M
3300012359|Ga0137385_10992484Not Available693Open in IMG/M
3300012359|Ga0137385_11595193Not Available516Open in IMG/M
3300012362|Ga0137361_11112704Not Available711Open in IMG/M
3300012363|Ga0137390_10184963All Organisms → cellular organisms → Bacteria2070Open in IMG/M
3300012382|Ga0134038_1027496Not Available512Open in IMG/M
3300012503|Ga0157313_1042902Not Available562Open in IMG/M
3300012918|Ga0137396_11212725Not Available531Open in IMG/M
3300012923|Ga0137359_10065873All Organisms → cellular organisms → Bacteria3163Open in IMG/M
3300012927|Ga0137416_12090699Not Available520Open in IMG/M
3300012930|Ga0137407_11929353Not Available563Open in IMG/M
3300012948|Ga0126375_12014545All Organisms → cellular organisms → Bacteria510Open in IMG/M
3300012961|Ga0164302_10991889Not Available654Open in IMG/M
3300012971|Ga0126369_10686556Not Available1100Open in IMG/M
3300015358|Ga0134089_10243531All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium733Open in IMG/M
3300016422|Ga0182039_12175804All Organisms → cellular organisms → Bacteria511Open in IMG/M
3300016445|Ga0182038_11928207All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor534Open in IMG/M
3300018061|Ga0184619_10261774All Organisms → cellular organisms → Bacteria795Open in IMG/M
3300018422|Ga0190265_10914539All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium1000Open in IMG/M
3300018466|Ga0190268_12006280Not Available532Open in IMG/M
3300019233|Ga0184645_1131567Not Available525Open in IMG/M
3300019249|Ga0184648_1518102All Organisms → cellular organisms → Bacteria657Open in IMG/M
3300021073|Ga0210378_10067658All Organisms → cellular organisms → Bacteria1401Open in IMG/M
3300021073|Ga0210378_10127562Not Available986Open in IMG/M
3300021560|Ga0126371_12311140Not Available650Open in IMG/M
3300025972|Ga0207668_10425683All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1128Open in IMG/M
3300025972|Ga0207668_11748029All Organisms → cellular organisms → Bacteria561Open in IMG/M
3300026295|Ga0209234_1028171All Organisms → cellular organisms → Bacteria2131Open in IMG/M
3300027332|Ga0209861_1005421Not Available1925Open in IMG/M
3300027646|Ga0209466_1124740All Organisms → cellular organisms → Bacteria523Open in IMG/M
3300027655|Ga0209388_1074470Not Available978Open in IMG/M
3300027671|Ga0209588_1210298All Organisms → cellular organisms → Bacteria604Open in IMG/M
3300027748|Ga0209689_1319269Not Available598Open in IMG/M
3300027882|Ga0209590_10877704Not Available566Open in IMG/M
3300027910|Ga0209583_10638395All Organisms → cellular organisms → Bacteria547Open in IMG/M
3300027961|Ga0209853_1058970All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1043Open in IMG/M
3300030903|Ga0308206_1062998Not Available763Open in IMG/M
3300030903|Ga0308206_1168899Not Available538Open in IMG/M
3300030989|Ga0308196_1003809Not Available1329Open in IMG/M
3300030993|Ga0308190_1155043All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → unclassified Ktedonobacter → Ktedonobacter sp. 13_1_40CM_4_52_4548Open in IMG/M
3300031058|Ga0308189_10107974Not Available894Open in IMG/M
3300031092|Ga0308204_10044474Not Available1053Open in IMG/M
3300031125|Ga0308182_1015583All Organisms → cellular organisms → Bacteria616Open in IMG/M
3300031184|Ga0307499_10202997All Organisms → cellular organisms → Bacteria → Proteobacteria611Open in IMG/M
3300031720|Ga0307469_11096989Not Available748Open in IMG/M
3300031764|Ga0318535_10565647All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria504Open in IMG/M
3300031798|Ga0318523_10624534All Organisms → cellular organisms → Bacteria530Open in IMG/M
3300031946|Ga0310910_11172154Not Available597Open in IMG/M
3300031947|Ga0310909_11512875All Organisms → cellular organisms → Bacteria → Proteobacteria534Open in IMG/M
3300032039|Ga0318559_10043394Not Available1856Open in IMG/M
3300032075|Ga0310890_11733889Not Available518Open in IMG/M
3300032174|Ga0307470_11205550All Organisms → cellular organisms → Bacteria615Open in IMG/M
3300034671|Ga0314796_175352All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria516Open in IMG/M
3300034673|Ga0314798_066892Not Available705Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil31.11%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil11.85%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil8.15%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil7.41%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.44%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.70%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil3.70%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere3.70%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil2.22%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment2.96%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil2.96%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand2.96%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil1.48%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.48%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.48%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.48%
Thermal SpringsEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs0.74%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.74%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.74%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil0.74%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.74%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.74%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.74%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.74%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.74%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere0.74%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.74%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.74%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000559Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemlyEnvironmentalOpen in IMG/M
3300002908Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cmEnvironmentalOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005181Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127EnvironmentalOpen in IMG/M
3300005184Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005553Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144EnvironmentalOpen in IMG/M
3300005554Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110EnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005563Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2Host-AssociatedOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006846Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4Host-AssociatedOpen in IMG/M
3300006853Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006880Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3Host-AssociatedOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300009691Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP2EnvironmentalOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300009812Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_50_60EnvironmentalOpen in IMG/M
3300009818Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40EnvironmentalOpen in IMG/M
3300010037Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012350Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012382Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_4_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012503Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.5.old.080610_RHost-AssociatedOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300015358Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300016422Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111EnvironmentalOpen in IMG/M
3300016445Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108EnvironmentalOpen in IMG/M
3300018061Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1EnvironmentalOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300018466Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 TEnvironmentalOpen in IMG/M
3300019233Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019249Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redoEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026295Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300027332Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_30_40 (SPAdes)EnvironmentalOpen in IMG/M
3300027646Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes)EnvironmentalOpen in IMG/M
3300027655Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)EnvironmentalOpen in IMG/M
3300027671Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)EnvironmentalOpen in IMG/M
3300027748Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)EnvironmentalOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027910Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)EnvironmentalOpen in IMG/M
3300027961Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40 (SPAdes)EnvironmentalOpen in IMG/M
3300030903Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030989Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_197 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030993Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_185 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031058Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031092Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031125Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_153 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031184Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_SEnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031764Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27EnvironmentalOpen in IMG/M
3300031798Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19EnvironmentalOpen in IMG/M
3300031946Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172EnvironmentalOpen in IMG/M
3300031947Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000HEnvironmentalOpen in IMG/M
3300032039Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21EnvironmentalOpen in IMG/M
3300032075Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300034671Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24R1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034673Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24R3 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
F14TC_10115352433300000559SoilMLTLMHQNADIPPQAFPMLEVFLTEPFPHTPQDMMQLEQRLARAAAQTADQILLIQVTRAHEDEAFVKQA
JGI25382J43887_1026046513300002908Grasslands SoilMLTLLHHTTEVHPCQFSWLEALLEEPFPQTPEDLLQLEQRLATAAGQAADQIVLVQLTRAHEDEAF
Ga0066680_1071865223300005174SoilMLTLLHHTTEVHPCQFSLLEALLEEPFPQTPNDLLQLEQRLSAAAAQVADQIVLAQLTRAHEA
Ga0066685_1038009313300005180SoilMLTLRHHTTEVHPCQFSLLEALLEEPFPQTPNDLWQLEQRLSAAAAQVADQIVLAQLTRAHEAEAFVTQ
Ga0066678_1075682723300005181SoilMLTLMHHNANDLPHPFCMLEVLLAEPFPQTPADMLQLEQRLSVAAAQTADQMVLVQLTRAHE
Ga0066671_1091759113300005184SoilMLTLLHQHTTSVPQSQFPSLEALLGEPFPRTPEDLLQLERRLSTAAGQVADQIVLVQLTRAHEDEAF
Ga0066388_10723691113300005332Tropical Forest SoilMLTLMQQNAHAHPHLFTSLEALLAEPFPHTPQEMLQLEQRLSTAAAQIADQILLVQLTRAHEDEHFVR
Ga0066388_10726479323300005332Tropical Forest SoilMLTLMQHTTHGLPHPFPTLEALLAEPFPRTPQDMMQLERQLSTATAQTADQIMLVQVTRAHEDEAFVTDLPPKPQALEAS*
Ga0070700_10071746813300005441Corn, Switchgrass And Miscanthus RhizosphereMLTLTQHTTNSLPHPFPTLEAMLAEPFPRTPQDMMQLEQRLSIAAAQTADQMVLVERPIRLHVL*
Ga0070708_10173293623300005445Corn, Switchgrass And Miscanthus RhizosphereMLTLLHHTTDAHQCQFASLEALLAEPFPQTPQDLLPLAQRLSVAAAQVADQVVLVQLTRAHAAEAFVT
Ga0070706_10014813743300005467Corn, Switchgrass And Miscanthus RhizosphereMLTLMHHTTNGLPHPFSTLEALLAEPFPRTPQDMMQLEQRLSIAAAQTADQILLVQLTRAHEDETFVRQAIAQAR
Ga0070697_10052290033300005536Corn, Switchgrass And Miscanthus RhizosphereMLTLLHHTTSVPQSQFPSLEALLAEPFPRTPEDLLQLEQRLSTAAVQVADQIVLVQLTRAHEDEAF
Ga0066695_1065915023300005553SoilMLTLLHHTTDVHQCQFSWLEALLEEPFPRTPEDLFHLEQRLSTAAMQVADQIVLMQLTRAHEDEA
Ga0066661_1046141513300005554SoilMLTLLHHTTEVHPCQFSLLEAILEEPFPQTPNDLFQLEQRLSAAAAQVTDHIVLAQLTHAHEAEAFVTQAIAQARAQS
Ga0066692_1057253013300005555SoilMLTLLHHTTEVHPCQFSLLEALLEEPFPQTPNDLLQLEQRLSAAAAQVADQIVLAQLTRAHEAGAFVTQALAQARAQSPV
Ga0066704_1068315613300005557SoilMLTLMHHNANDLPHPFCMLEVLLAEPFPQTPADMLQLEQRLSVAAAQTADQMVLVQLTRAHEAEAFVRQAIAQARAQSPVPL
Ga0066700_1101140913300005559SoilMLTLMHQNANVHPHSFSSLEALLAEPFPHTPQEMLQLEQRLSTAAAQTADQMVLVQLTRAHEAEAFVTQAIAQARAQSPV
Ga0068855_10205368913300005563Corn RhizosphereMLTLLHHTTEVYPCQFSLLEALLAEPFPQTPNDLLQLEQRLSAAAAQVADQIVLVQLTRAHEAEAFVTQAIAHARAQSP
Ga0070702_10102939713300005615Corn, Switchgrass And Miscanthus RhizosphereMLTLMHQNAHIPPQAFSMLEVFLTEPFPQTPQDMMQLEQRLARAAAQTADQMLLIQLTRAHEDEAFVKQATAQ
Ga0066903_10129541623300005764Tropical Forest SoilMLTLLHQHTTSVPQAQFPSLEALLGEPFPRTPEDLLQLERRLSTAAGQVADQLVLVQLTRAHEDKPHHDILALPHFW*
Ga0066903_10583315113300005764Tropical Forest SoilMLTLMHQNANAHPHPFSSLEALLAEPFPHTPQEMWQLEQRLSIAAAQIADQILLVQLTRAHE
Ga0079220_1162325923300006806Agricultural SoilMLTLMQHTTHSLPHPCSTLEALLAEPFPRTPQDMVQLEQQLSTAAAQTADQILLVQVTRAHEDEAFVRHAIAQARAQRAV
Ga0075430_10174362913300006846Populus RhizosphereMFPLLHANAHAHPHSFSLLEALLAEPFPHTPQEMLQLEQRLSTAAAQTADQLLLVQLTRAHEDEAFVRQA
Ga0075420_10149656013300006853Populus RhizosphereMLTLMHHTTHVPPHPFPTLEVLLADPFPHTPQDMMQLEQRLSTAAAQTADQILLVQVTRAHEDEAFVRQAI
Ga0075434_10021648113300006871Populus RhizosphereMLTLLHHTPKVHPCQFSLLEALLEKPFPQTPHDLLQLEQRLSAAATQVADQIVLGQLTRAHEEEAVVRQAIARARGQSLGDFRKK*
Ga0075429_10046497913300006880Populus RhizosphereMLTLLHHTPKVHPCQFSLLEALLEEPFPQPPNDLLQLEQRLSAAAAQVADQIVLAQLTRA
Ga0068865_10130630413300006881Miscanthus RhizosphereMLTLMHQNANVPPPPFPALEVLLAEPFPHTPQEMLQLEQRLSTAAAQTADQILLVQVTRAHEDEAFVRQAIAQARAQR
Ga0099791_1033400613300007255Vadose Zone SoilMLTLMHQNAHIPPQAFSMLEVFLTEPFPHTPQDMMQLEQRLARAAAQTADQILLIQLTRAHEDEAFVKQAIAQARAQRS
Ga0099791_1057763023300007255Vadose Zone SoilMLTLMHHNANVHSHPFSSLEVLLAEPFPHTPQEMLQLEQRLSTAAAQTADQMVLVQLTRAHEA
Ga0099793_1054820913300007258Vadose Zone SoilMLTPLHHTTDVHQCQFSLLEALLEEPFPRTPEDLLQLEQRLSTAAGQIADQIMLVQLTRAHKDEA
Ga0066710_10460518413300009012Grasslands SoilMLTLMHNTTCVPQPQFPSLEALLDEPFPRTPEDLVQLEQRLAIAAGQAADQIVLVQLTRAHED
Ga0099829_1080624623300009038Vadose Zone SoilMLTLMHHNTDGLPHPFPTLEALLAEPFPRTPQDMMQLEQQLSTAAAQTADQIMLVQVTRAHADEAFVRQAIAQARAWRAVPLVHKG
Ga0099829_1083694613300009038Vadose Zone SoilMLTLLHHTTSVPQLQFPSLAALLDEPFPRTPEDMVQLEQRLLTAAAQTADQMLLVQVTRAHEDEAF
Ga0099830_1104564623300009088Vadose Zone SoilMLTLMHHNTDGLPHPFPTLEALLAEPFPRTPQDMMQLEQQLSTAAAQTADQFMLVQVTRAHEDEAFVRQAIAQARAWRAVPLVHK
Ga0099827_1019343313300009090Vadose Zone SoilMLTILHHTTELHLCQFSLLEAILEEPFPQTPNDLFQLEQRLSAAAAQVADHI
Ga0099827_1066240313300009090Vadose Zone SoilMLTLLHHTTEVHPCQFSLLEALLEEPFPQTPNDLLQLEQRLSAAAAQVADQIGAPGVIAG
Ga0099827_1145443013300009090Vadose Zone SoilIATQTPTTAVPQSQFPSLEALLDAPFPQTPQDLLQLEQRLSAAAAQVADQIVLVQLTRAHEAEAFVMQAIAGVAQRFV*
Ga0105245_1322705013300009098Miscanthus RhizosphereMLTLTQHTTNSLPHPFPTLEAMLAEPFPRTPQDMMQLEQRLSIAAAQTADQMVLVQLTRAHEDETFVRQALAQVRLQGL
Ga0066709_10335727413300009137Grasslands SoilMLTLMHQNANVHPHPFSSLEALLAEPFPHTPQEMLQLEQRLSTAAAQIADQILLVQLTRAHEDEHFVRQA
Ga0099792_1086327113300009143Vadose Zone SoilMLSLMHHNANVPPPPFPALEVLLAEPFPHTPQEMLQFEQRLSTAAAQTADQILLVQVTRAHEDEAFVRQ
Ga0111538_1233278423300009156Populus RhizosphereMLTLLHQNVNAHPCPFSSLEALLAEPFPHTPQEMLQLAQRLSTAAAQIADQILLVQLTRAHEDEHFVRHALAQARGQ
Ga0105249_1010871553300009553Switchgrass RhizosphereMLTLLHHTTKVHPCQFSLLEAILEEPFPQTPHDLLQLEQRLSAAAAQVADQIVLVQLTRAHEDEAFVRQAIARARGQSP
Ga0114944_131376723300009691Thermal SpringsMLTLVHHTTDVLPCQFSSLEALFDAPFPQTPEDMLQLEQRLSAAAAQAADQIVLVQLTRAHEAEVFVTPAIAQARAQSAVPLVHK
Ga0126374_1021877223300009792Tropical Forest SoilMQHTTHGLPHPFSTLEAMLAEPFPRTPQDMMQLEQRLATAAAQTADQMLLIQGTRAHEDEAFVTDLPPKPQALEAS*
Ga0126374_1052999923300009792Tropical Forest SoilMLTLMHQNADVPPHPFPALEVFLAEPFPHTPQAMLQLEQRLSTAAAQTADQIVLVQVTRAHEDEAFVRQAI
Ga0126374_1056815423300009792Tropical Forest SoilMLTLMQHNPKGLSYPFPTLEALLAEPFPRTPQDMMRLEQQLSTAAAQTADQIMRVQVTRAHEDEAFVTDLPPKPQALEAS*
Ga0105067_104426913300009812Groundwater SandMLTLLHHTTEVHPCQFSLLEAILEEPFPQTPNDLFQLEQRLSAAAAQVADHIVLVQLTRAHEAEAFVTQAIVQAR
Ga0105072_110924413300009818Groundwater SandMLTLLHHTTEVHPCQFSLLEALLEEPFPQTPNDLWQLEQRLSAAAAQVADQIVLVQLTRAHEAEAFVMQAIAGVAQR
Ga0126304_1057573513300010037Serpentine SoilSLSKEVPQPMRTLMHHTTTVPLPPFPMLEVLLAEPFPHTPQDMMQLEQRLSTAAAQTADQILLVP*
Ga0126384_1060135813300010046Tropical Forest SoilMHQNANAHPHPFSSLEALLAEPFPHTPQEMWQLEQRLSIAAAQMADQILLVQLTRAHEDENFVRHALAQARG*
Ga0126384_1194917823300010046Tropical Forest SoilMLTLTQHTTKSLPYPFPTLEAMLAEPFPRTPQDMMQLEQRLLIAAAQTADQMMLVQVTRAHEDEAFVRHAIAQARA*
Ga0126382_1139482013300010047Tropical Forest SoilTNGLPHPFPTLEALLAEPFPRTPQDLMQLEQQLSTAAAQTADQILLVQVTRAHEDEGLCRNFSLKRSEV*
Ga0126382_1171686913300010047Tropical Forest SoilMLTLMHQNANAHPHPFSSLEALLAEPFPHTPQEMWQLEQRLFIAAAQIADQILLVQLTRAHEDENFVRHALAQARG*
Ga0126378_1116897113300010361Tropical Forest SoilMLTLMHQNANAHPHPFSSLEALLAEPFPHTPQEMLQLEQRLSTAAAQTADQMLLVQVTRAHEDEAFCRFNHKFACSDA*
Ga0126378_1131197323300010361Tropical Forest SoilMLTLMQHTTNGLPHPFPTLAALLAEPFPRTPQDMMQLEQRLSIAAAQTAAQIVLVQVTRAHED
Ga0126378_1193956523300010361Tropical Forest SoilMLPLMHQNANADPHPFSSLEALIAEPFPHTPQEMLQLEQRLSIAAAQIADQILLVQLTRAHEDENFVRHALAQARG*
Ga0126377_1297421013300010362Tropical Forest SoilMLTLMHHTTNNLPHPFPTLEALLAEPFPRTPQDMMQLEQRLSTAAAQTADQILLVQVTRAHEDEAFVRQAIAQARAQRA
Ga0126379_1289355213300010366Tropical Forest SoilMLTPLHQNANAHPHPCSSLEALLAEPFPHTPQEMWQLEQRLSIAAAQIADQILLVQLTRAHEVENFVRHALVQARG*
Ga0126383_1271891923300010398Tropical Forest SoilMLTLMQHTTNGLPHPFPTLEALLAEPFPRTPQDMMQLERQLSTATAQTADQIMLVQVTRAHEDEAFVTDLPPKPQALEAS*
Ga0137392_1033222713300011269Vadose Zone SoilMLTLVHNTTDVHQRQFSSLEALLEAPFPQTPEDMLQLEQRLSAATAQVADQIVLVQLTRAHEAEAFVTQAIAQARAQSP
Ga0137392_1098319213300011269Vadose Zone SoilMLTLMHHTANVHPHPFSSLETLLAESFPHTPPEMLQLEQRLSTAAAQTADQIVLVQLTRAHEAE
Ga0137391_1062112723300011270Vadose Zone SoilLASLLTLVHNTTDVHQRQFSSLEALLDAPFPQTPEDMLQLEQRLSAATAQVADQIVLVQLTRAHEAEA
Ga0137391_1108018713300011270Vadose Zone SoilMLTLMHHTANVHPHPFSSLETLLAESFPHTPPEMLQLEQRLSTAAAQTADQIVLVQLTRAHEAEAFV
Ga0137391_1117821313300011270Vadose Zone SoilMLTLLHHTTTVPQSQFPSLEALLDEPFPRTPEDLLQLERRLSTAAGQVADQIVLVQLTRAHEDEAF
Ga0137391_1138962923300011270Vadose Zone SoilMLTLVHNTTDVHQRQFSSLEALLEAPFPQTPEDMLQLEQRLSAATAQVADQIVLVQLTRAHEAEA
Ga0137389_1014132513300012096Vadose Zone SoilMLTLLHHTTDVHPCQFSSLEALLEEPFPQTPHDLWQLEQRLSAAATQVADQIVLVQLMRAHEAEAFVT
Ga0137388_1028449513300012189Vadose Zone SoilMLTLLHHTTEVHLCQFSLLEAILEEPFPQTPNDLFQLEQRLSAVAAQVADHIVLAQLTRV
Ga0137388_1118632723300012189Vadose Zone SoilMLTLLHHTTEVHPCQFSLLEAILEEPFPQTPHDLFQLEQRLSAVAAQVTDHIVLVQLTRAHEAEAFVTQAIVQARA
Ga0137365_1044825633300012201Vadose Zone SoilMLTLLHHTTDAHQCQFASLEALLAEPFPQTPQDLLQLEQRLSVAAAQVADQVV
Ga0137362_1141228313300012205Vadose Zone SoilMLTLMHHNTNGLPHPFPLLEVLLAEPFPQTPEDMLQLEQRLSVAAAQTADQMVLVQLTRAHEAEAFVRQAIAQARAQ
Ga0137362_1165302313300012205Vadose Zone SoilMLTLLHHTTEVHPCQFSLLEALLEEPFPQTPNDLLQLEQRLSAAAAQVADQIVLAQ
Ga0137380_1073473313300012206Vadose Zone SoilMLTLMHHNANVHPHPFSSLEALLAEPFPHTPQEMVQLEQRLSTAAAQTADQMVLVQLTRAHEAEAFVTQAIAQARAQSPVPLVHKG
Ga0137379_1045719223300012209Vadose Zone SoilMLTRIHHTTYVPQPQFPSLEALLNEPFPRTPEDLLQLEQRLSTAAVQVADQIVLVQLTRAHED
Ga0137378_1001167983300012210Vadose Zone SoilMLTLMHHNTNGLPHPFASLEAMLAKPFLHTPQERWQLEQRLSVAAAQTADQMVLVQLTRAHEAEAFVTQAIAQARAQSPVPLVHKGFRM
Ga0137378_1095050713300012210Vadose Zone SoilMLTLTQHTTNSLPHPFPTLEAMLAEPFPRTPQDMMQLEQRLSIAAAQTADQILLVQLTRAHEDEAFVRQAIAQARAQYAVSLVHKARLVMVA
Ga0150985_10836057913300012212Avena Fatua RhizosphereMLTLMHHNTHGLPYPFPTLEALLAEPFPRTPQDMMQMEQRLSIAAAQTADQIVLVQVTRAHEDEAFVRQAITQA
Ga0137370_1104664813300012285Vadose Zone SoilMLTLLHQNANAHPHPFSSLEAFLVEPFPHTPQEMLQLEQRLSTAAAQIADQILLVQLTRAHEDEHFVRHALAQA
Ga0137387_1039432413300012349Vadose Zone SoilMLTLLPHTTEVHSCQFALLEALLEEPVPHTPQERLPLEPRLSTAAAQTADQIV
Ga0137387_1053650823300012349Vadose Zone SoilMLTLMHHNTNGLPHPFASLEAMLAEPFPHTPQEMLQLEQRLSTTAAQTADQIVLVQLTRAHEAEAFVTQAIAHAR
Ga0137372_1109780613300012350Vadose Zone SoilMLTLMHHTTTVPLHPFPTLEVLLAEPFPHTPQEMLQLEQRLSTTAAQTADQIVLVQLTRAHEAE
Ga0137385_1099248423300012359Vadose Zone SoilMLTLLHHTTDAHQCQFASLEALLAEPFPQTPHDLLQLEQRLSVAAAQVADQVVLVQLTRAHEAEAFVTQ
Ga0137385_1159519323300012359Vadose Zone SoilMLTLMHHNTNGLPHPFASLEAMLAEPFPHTPQEMLQLEQRLSTTAAQTADQIVLVQLTRAHEAEAFVTQAIA
Ga0137361_1111270423300012362Vadose Zone SoilMLTLMHHNAKVHPHPFSSLETLLAGPFPHTPQEMLQLEQRLSTAAAQTADQIVLVQLTRAHEAEAFVT
Ga0137390_1018496313300012363Vadose Zone SoilMLTLHHTTEVHPCQFSLLEALLEEPFPQTPDDLLQLEQRLSAAAAQVADQIVLAQLTRAHEAEAFVTQ
Ga0134038_102749613300012382Grasslands SoilMLTLLHQTTAVHPCQFSWLEALLEEPFPQTPNDLVQLEQHLSAAAAQVADHIVLAQLTRAHEAEAFVTQALAQA
Ga0157313_104290213300012503Arabidopsis RhizosphereMLTLMHQNANVPPPPCPALEVLLAEPFPHTPQEMLQLEQRLSTAAAQTADQILLVQVTRAHEDEAFVRQAIAQA*
Ga0137396_1121272513300012918Vadose Zone SoilMLTLMQHTTNGLSHPFPTLEALLAEPFPRTPQDMMQLEQQLATAAAQTADQIMLVQVTRAHEDEAFVRQA
Ga0137359_1006587313300012923Vadose Zone SoilMLTLLHHTTDVHQRQFASLEALLDEPFPQTPEDMLQHEQRLAAATAQVADQIVLVQLTRA
Ga0137416_1209069913300012927Vadose Zone SoilMLTLLHHTTEVHPCPFSLLEALLEEPFPHTPQEMLQLEQRLSTAAAQTADQMVLVQLTRAHEAEA
Ga0137407_1046925623300012930Vadose Zone SoilMLTLMQHNANGPPYPFPWLAALLAEPFPQTPQEMLQLEQRLSIAAARTADQILLVHIPPDLVVIP*
Ga0137407_1192935323300012930Vadose Zone SoilMLTLLHHTTEVHPCQFSLLEALLEEPFPQTPEDLLQLEQRLATAAGQAADQIV
Ga0126375_1201454523300012948Tropical Forest SoilMLTLLQHTTDVHSCQCSLLETFLEEPFPQTPHELFQLEQRLSAAAGQIADQIVLGQRTRAHAAEALVTQAMAHARAQSPGPLVHKGVR
Ga0164302_1099188923300012961SoilMLTLTQHTTNSLPHPFPTLEAMLAEPFPRTPQDMMQLEQRLSIAAAQTADQMVLVQLTRAHEDETFVRQALAQVRL
Ga0126369_1068655613300012971Tropical Forest SoilMLTLMHQNANAHPHPFSSLEALLAEPFPHTPQEMWQLEQRLSIAAAQIADQILLVQLTRVHEVENFVRHALAQARG*
Ga0134089_1024353113300015358Grasslands SoilTMLTLLHHTTEVHPCQFSLLEALLEEPFPQTPNDLLQLEQRLSAAAAQVADQIVLAQLTRAHEGS*
Ga0182039_1217580423300016422SoilMLTLMQHNTHGLPHPFPTLEALLAEPCPRPPQDMRQLAQPLSTATAPAAAQMLLVQVTRA
Ga0182038_1192820713300016445SoilMLTLLHPPTDAYQCQFASLEAFLAEPFPQTPHDLLQLEQRLSVAAAQVADQVVLVQLTRAHEAGAFVTQAIAQARARSPVPL
Ga0184619_1026177423300018061Groundwater SedimentMLTLMHHNANVHSHPFSSLEVLLAEPFPHTPQEMLQLEQRLSTAAAQTADQMVLVQLTRAHEAEAFVT
Ga0190265_1091453923300018422SoilMLTLMQHPANVHPHPFSSLEALLAEPFPHTPQEMLQLEQRLSIAAAQTADQIVLVQLTRAHEA
Ga0190268_1200628013300018466SoilMLTLMDHNTHGLPHPFPTLEALLAEPFPRTPQDMVQLEQRLATAAAQTADQMLLIQVTRAHEDEAFVRQAMVQARAQ
Ga0184645_113156713300019233Groundwater SedimentMLTLMHHHANVHSHPFSSLEVLLAEPFPHTPQDMLQLEQRLSTAAAQTADQIVLVQLTRAHEAEVFVTQAIAQARAQ
Ga0184648_151810213300019249Groundwater SedimentMLTLLHHTTEVHPCQFSLLEALLEEPFPQTPNDLFQLEQRLSAAAAQVADHIVLVQLTRA
Ga0210378_1006765813300021073Groundwater SedimentMLTLLDHTTSVPQSQFPSLEALLAEPFPRTPEDLLQLEQRLATAAGQAADQIVLVQ
Ga0210378_1012756233300021073Groundwater SedimentMLTLLDHTTSVPQLQFPSLEALLAEPFPRTPEDLLQLEQRLATAAGQAADQIVLVQ
Ga0126371_1231114013300021560Tropical Forest SoilMLTLMHQNANAHPHPFSSLEALLAEPFPHTPQEMWQLEQRLSIAAAQIADQILLVQLTRAHEVENFVRHALAQARG
Ga0207668_1042568323300025972Switchgrass RhizosphereMLTLMHHTTNVPPHPFPTLEVLLAEPFPHTPQDMMQLEQRLSTAAAQTADQILLVQVTRAHEDEAFVRQAIAQA
Ga0207668_1174802923300025972Switchgrass RhizosphereMLTLMHQHAHVHPHPFSSLEVLLEEPFPHTPQEMLQLEQRLSTAAAQTADQMVLVQLTRAHEAEAFVTQAIAHARAQS
Ga0207708_1056941923300026075Corn, Switchgrass And Miscanthus RhizosphereMLTLTQHTTNSLPHPFPTLEAMLAEPFPRTPQDMMQLEQRLSIAAAQTADQMVLVERPIRLHVL
Ga0209234_102817113300026295Grasslands SoilMLTLLHQTTAVHPCQFSWLEALLEEPFPQTPNDLVQLEQHLSAAAAQVADHIVLAQLT
Ga0209861_100542113300027332Groundwater SandMLTLMHHNANVHSHPFSSLEVLLAEPFPHTPQDMLQLEQRLSTAAAQTADQMLLVQLTRAHEDEAFVRQAIAQARAQCSVPL
Ga0209466_112474023300027646Tropical Forest SoilMLTLLHHTTAVPQSQFPSLEALLAEPFPRTPEDLLQLEQRLSTAAAQVADQIVLVQL
Ga0209388_107447023300027655Vadose Zone SoilMLTLMHHNANVHSHPFSSLEVLLAEPFPHTPQEMLQLEQRLSTAAAQTADQMVLVQLTRAHEAEAFVTQAIAHARAQSPVPLVHKGF
Ga0209588_121029823300027671Vadose Zone SoilMLTLMHHNANVHPHPFSSLETLLAEPFPHTPQEMLQLEQRLSTAAAQTADQMVLVQLTRAHEAEA
Ga0209689_131926913300027748SoilMLTLMHQNANVHPHSFSSLEALLAEPFPHTPQEMLQLEQRLSTAAAQIADQILLVQLTRAHEDEHFVR
Ga0209590_1087770413300027882Vadose Zone SoilMLTLLHHTADAHQRQFASLEALLAEPFPQTPEDMLQLEQRLSVAAAQLADQIMLVQLTRTHEAEAFVMQAIAHAR
Ga0209583_1063839513300027910WatershedsMLTLLPHTADVHQCQFPLLEALLEEPFPQTPNDLVQLEQRLSAVAAQVADQMVLVQLTRAHEAEA
Ga0209853_105897013300027961Groundwater SandMLTLLHHTTAVPQSQFPSLEALLDAPFPQTPQDLLQLEQRLSAAAAQVADQIVLVQLTRAHEAEAFVMQAIAGVAQRFV
Ga0308206_106299813300030903SoilMLTLMHHNANVHPHPFSSLETLLAEPFPHTPQEMLQLEQRLSTAAAQTADQMVLVQLTRAHEAEAFVTQAIAHARAQSP
Ga0308206_116889913300030903SoilMLTLMQHNTNGLPHPFPTLEALLAGPFPRTPQDMMQLEQQLSTATAQTADQIMLVQVTRAHEDEAFVRQAMA
Ga0308196_100380913300030989SoilMLTLLDHTTSVPQSQFPSLEALLAEPFPRTPEDMLQLEQQLLTAAAQTADQMLLIQLTRAHEDEAFVKQATAQARAQRAVPLVHK
Ga0308190_115504313300030993SoilMLTLLDHTTSVPQSQFPSLEALLAEPFPRTPEDLLQLEQRLATAAGQAADQIVLVQLTRAHEDEAFVRQAIAHVRAQSPGIRLRRDS
Ga0308189_1010797413300031058SoilMLTLLHHTTEVHPCQFSLLEALLEEPFPQTPHDLLQLEQRLSAAAAQVADHIVLTQLTRAHEAEAFVTQAL
Ga0308204_1004447413300031092SoilMLTLLHHTTEVHPCQFSWLEALLEEPFPQTPEDLLQLEQRLATAAGQAADQIVLVQLTRAHEDEAFVRQAIALVRARSP
Ga0308182_101558323300031125SoilMLTLLHHTTSVPQLQFPSLAALLDEPFPQTPEDMLQLEQHLLTAAAQTADQILLVQVTP
Ga0307499_1020299723300031184SoilMLTLMHQHAHVHPHPFSSLEVLLEEPFPHTPQEMLQLEQRLSTAAAQTADQIVLVQLTRAHEAEAFVTQAI
Ga0307469_1109698923300031720Hardwood Forest SoilMLTLLHHTTEVHPCQFSLLEALLEEPFPQTPNDLLQLEHRRSTAAAQTADQMVLVQLTRAHEAEAFVRQAIAHA
Ga0318535_1056564723300031764SoilMLTLMQHNTHGLPHPFPTLEALLAEPCPRPPQDMRQLAQPLSTATAPAAAQTLLVQVTRAHEDKACGRPAMAQARAPRAV
Ga0318523_1062453413300031798SoilMLTLLHQNANAHPHPFSSLEALLAEPFPHTPQEMLQLEQRLSTAAAQIADQILLVQLTRAHEDEHFVRH
Ga0310910_1117215413300031946SoilMPTLMHQNAHAHPHLFTSLEALLAEPFPHTPQEMLQLEQRLSTAAAQMADQILLVQLTRAHEDEHFVRQAMAQARGQHPVP
Ga0310909_1151287513300031947SoilMLTLMYHTNNVLPPPFPTLEALLAEPFPHTPQEMVQLEQRLSTAAAQTADQILLVQVTRAHEDEAFVRGFGSCAAT
Ga0318559_1004339413300032039SoilMLTLMQHNTDGLPHPFPTLEALLAEPFPRTPQDMMQLERQLSTATAQTADQMMLVQVTRAHEDEAFV
Ga0310890_1173388913300032075SoilMLTLMQHTTNGLPHPFPTLEALLAEPFPRTPQDMMQLEQQLSTAAAQTADQIMLVQVTRAHEDEAC
Ga0307470_1120555023300032174Hardwood Forest SoilMLTLMHHTTTVPLHPFPMLEVLLAEPFPHTPQDMMQLEQRLSTAAAQTADQILLVQLTRAHEDAAFVRQAI
Ga0314796_175352_263_5143300034671SoilMLTLLQHTTDGHSCQCSLLETFLEEPFPQTPHDLFQLEQRLSAAAAQVADHIVLAQLTRAHEAEAFVTQAIAQARAQSPVPLVH
Ga0314798_066892_3_2033300034673SoilMLTLMQHTTKGLPHPFPTLEAVLAEPFPRTPQDMMQLEQRLATAAAQTADQILLIQVTRAHEDEAFV

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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