Metagenome / Metatranscriptome Family F058004

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F058004
Family Type	Metagenome / Metatranscriptome
Number of Sequences	135
Average Sequence Length	69 residues
Representative Sequence	MTQSSTQERLYTTVEFDRWWEAQGRTTALQNMLDPAAAKLLAWEAWRKGREHLSEATAHHRLQPARR
Number of Associated Samples	70
Number of Associated Scaffolds	135

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	73.33 %
% of genes near scaffold ends (potentially truncated)	30.37 %
% of genes from short scaffolds (< 2000 bps)	93.33 %
Associated GOLD sequencing projects	69
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (53.333 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere (16.296 % of family members)
Environment Ontology (ENVO)	Unclassified (42.222 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.333 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 46.32% β-sheet: 0.00% Coil/Unstructured: 53.68%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 135 Family Scaffolds
PF00079	Serpin	7.41
PF08734	GYD	2.22
PF01925	TauE	1.48
PF00106	adh_short	1.48
PF00903	Glyoxalase	1.48
PF00578	AhpC-TSA	1.48
PF01323	DSBA	1.48
PF00076	RRM_1	1.48
PF00196	GerE	0.74
PF13239	2TM	0.74
PF13646	HEAT_2	0.74
PF13701	DDE_Tnp_1_4	0.74
PF01609	DDE_Tnp_1	0.74
PF08818	DUF1801	0.74
PF12770	CHAT	0.74
PF02463	SMC_N	0.74
PF00253	Ribosomal_S14	0.74
PF13460	NAD_binding_10	0.74
PF02599	CsrA	0.74
PF03352	Adenine_glyco	0.74
PF02617	ClpS	0.74
PF01244	Peptidase_M19	0.74
PF07596	SBP_bac_10	0.74
PF01814	Hemerythrin	0.74
PF07394	DUF1501	0.74
PF07885	Ion_trans_2	0.74

COG ID	Name	Functional Category	% Frequency in 135 Family Scaffolds
COG4826	Serine protease inhibitor	Posttranslational modification, protein turnover, chaperones [O]	7.41
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	2.22
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	1.48
COG2165	Type II secretory pathway, pseudopilin PulG	Cell motility [N]	1.48
COG0199	Ribosomal protein S14	Translation, ribosomal structure and biogenesis [J]	0.74
COG1551	sRNA-binding carbon storage regulator CsrA	Signal transduction mechanisms [T]	0.74
COG2127	ATP-dependent Clp protease adapter protein ClpS	Posttranslational modification, protein turnover, chaperones [O]	0.74
COG2355	Zn-dependent dipeptidase, microsomal dipeptidase homolog	Posttranslational modification, protein turnover, chaperones [O]	0.74
COG2818	3-methyladenine DNA glycosylase Tag	Replication, recombination and repair [L]	0.74
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.74
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.74
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.74
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	0.74
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.74
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.74
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	0.74
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	0.74
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.74

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.33 %
All Organisms	root	All Organisms	45.93 %
Polyangium	genus	Polyangium	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.33 %
cellular organisms	root	All Organisms → cellular organisms	45.93 %
Polyangium spumosum	species	Polyangium → Polyangium spumosum	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.33 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	45.93 %
Polyangium spumosum	species	Polyangium → Polyangium spumosum	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.33 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	25.93 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.22 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.96 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.48 %
Polyangium spumosum	species	Polyangium → Polyangium spumosum	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.33 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	25.93 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.22 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.74 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.74 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.74 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.74 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.74 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.74 %
Polyangium spumosum	species	Polyangium → Polyangium spumosum	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.33 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	20.00 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	2.96 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	1.48 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.74 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.74 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.74 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.74 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.74 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.74 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.74 %
Polyangium spumosum	species	Polyangium → Polyangium spumosum	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.33 %
Gemmatales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales	5.19 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	2.96 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	2.96 %
Isosphaerales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales	1.48 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	1.48 %
Pirellulales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales	0.74 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.74 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.74 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.74 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.74 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.74 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.74 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.74 %
Polyangium spumosum	species	Polyangium → Polyangium spumosum	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.33 %
Gemmataceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	5.19 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	2.96 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	1.48 %
Isosphaeraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae	1.48 %
Parasphingorhabdus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Parasphingorhabdus	1.48 %
Aliiroseovarius	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Aliiroseovarius	0.74 %
Pirellulaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae	0.74 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	0.74 %
unclassified Planctomycetales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → unclassified Planctomycetales	0.74 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	0.74 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.74 %
Paenibacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae	0.74 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.74 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.74 %
Polyangium spumosum	species	Polyangium → Polyangium spumosum	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.33 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	2.96 %
Parasphingorhabdus cellanae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Parasphingorhabdus → Parasphingorhabdus cellanae	1.48 %
Zavarzinella	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Zavarzinella	1.48 %
Alienimonas	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Alienimonas	0.74 %
Aquisphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Aquisphaera	0.74 %
Tautonia	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Tautonia	0.74 %
unclassified Candidatus Sulfopaludibacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter	0.74 %
unclassified Aliiroseovarius	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Aliiroseovarius → unclassified Aliiroseovarius	0.74 %
Planctomycetales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → unclassified Planctomycetales → Planctomycetales bacterium	0.74 %
Anatilimnocola	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Anatilimnocola	0.74 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.74 %
Gemmata	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Gemmata	0.74 %
Archangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae	0.74 %
Cohnella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Cohnella	0.74 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.74 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.74 %
Polyangium spumosum	species	Polyangium → Polyangium spumosum	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.33 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	2.96 %
unclassified Zavarzinella	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Zavarzinella → unclassified Zavarzinella	1.48 %
Parasphingorhabdus cellanae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Parasphingorhabdus → Parasphingorhabdus cellanae	1.48 %
Aliiroseovarius sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Aliiroseovarius → unclassified Aliiroseovarius → Aliiroseovarius sp.	0.74 %
Tautonia marina	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Tautonia → Tautonia marina	0.74 %
Anatilimnocola aggregata	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Anatilimnocola → Anatilimnocola aggregata	0.74 %
Candidatus Sulfopaludibacter sp. SbA4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	0.74 %
Aquisphaera giovannonii	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Aquisphaera → Aquisphaera giovannonii	0.74 %
Hyalangium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Hyalangium	0.74 %
Alienimonas	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Alienimonas	0.74 %
Planctomycetales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → unclassified Planctomycetales → Planctomycetales bacterium	0.74 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.74 %
Gemmata	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Gemmata	0.74 %
Cohnella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Cohnella	0.74 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.74 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.74 %
Polyangium spumosum	species	Polyangium → Polyangium spumosum	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.33 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	2.96 %
Zavarzinella sp.	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Zavarzinella → unclassified Zavarzinella → Zavarzinella sp.	1.48 %
Parasphingorhabdus cellanae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Parasphingorhabdus → Parasphingorhabdus cellanae	1.48 %
Hyalangium minutum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Hyalangium → Hyalangium minutum	0.74 %
Aliiroseovarius sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Aliiroseovarius → unclassified Aliiroseovarius → Aliiroseovarius sp.	0.74 %
Tautonia marina	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Tautonia → Tautonia marina	0.74 %
Anatilimnocola aggregata	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Anatilimnocola → Anatilimnocola aggregata	0.74 %
Candidatus Sulfopaludibacter sp. SbA4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	0.74 %
Aquisphaera giovannonii	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Aquisphaera → Aquisphaera giovannonii	0.74 %
Alienimonas	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Alienimonas	0.74 %
Planctomycetales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → unclassified Planctomycetales → Planctomycetales bacterium	0.74 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.74 %
Gemmata	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Gemmata	0.74 %
Cohnella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Cohnella	0.74 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.74 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.74 %
Polyangium spumosum	species	Polyangium → Polyangium spumosum	0.74 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459003\|FZN2CUW02HBXFX	Not Available	521	Open in IMG/M
2170459009\|GA8DASG01C2EF7	Not Available	502	Open in IMG/M
2170459009\|GA8DASG01DCEVS	Not Available	529	Open in IMG/M
2170459009\|GA8DASG02FPAL3	Not Available	546	Open in IMG/M
2170459011\|GI3SL7401AQ4LJ	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	515	Open in IMG/M
2170459011\|GI3SL7401DEWNT	Not Available	525	Open in IMG/M
2170459011\|GKWS7RC01ECFN0	Not Available	518	Open in IMG/M
3300004081\|Ga0063454_100256002	Not Available	1053	Open in IMG/M
3300004081\|Ga0063454_101202794	Not Available	627	Open in IMG/M
3300004092\|Ga0062389_100200163	Not Available	1961	Open in IMG/M
3300004120\|Ga0058901_1513680	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	1231	Open in IMG/M
3300004615\|Ga0068926_1355932	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	546	Open in IMG/M
3300004631\|Ga0058899_12203836	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	1139	Open in IMG/M
3300005332\|Ga0066388_100404516	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Aquisphaera → Aquisphaera giovannonii	2010	Open in IMG/M
3300005332\|Ga0066388_102301405	Not Available	975	Open in IMG/M
3300005332\|Ga0066388_105049517	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	670	Open in IMG/M
3300005332\|Ga0066388_106319698	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Aliiroseovarius → unclassified Aliiroseovarius → Aliiroseovarius sp.	598	Open in IMG/M
3300005332\|Ga0066388_108457303	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	513	Open in IMG/M
3300005533\|Ga0070734_10386888	Not Available	798	Open in IMG/M
3300005556\|Ga0066707_10353754	All Organisms → cellular organisms → Bacteria	960	Open in IMG/M
3300005560\|Ga0066670_10792828	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	574	Open in IMG/M
3300005575\|Ga0066702_10666603	Not Available	621	Open in IMG/M
3300005764\|Ga0066903_100240830	All Organisms → cellular organisms → Bacteria	2775	Open in IMG/M
3300005764\|Ga0066903_101003727	Not Available	1526	Open in IMG/M
3300005764\|Ga0066903_101115028	All Organisms → cellular organisms → Bacteria	1456	Open in IMG/M
3300005764\|Ga0066903_101540199	Not Available	1257	Open in IMG/M
3300005764\|Ga0066903_101863762	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	1151	Open in IMG/M
3300005764\|Ga0066903_107157308	Not Available	578	Open in IMG/M
3300006028\|Ga0070717_11574198	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300006800\|Ga0066660_11681403	Not Available	505	Open in IMG/M
3300006914\|Ga0075436_101558671	Not Available	502	Open in IMG/M
3300006918\|Ga0079216_10406149	Not Available	858	Open in IMG/M
3300009012\|Ga0066710_100555066	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Zavarzinella → unclassified Zavarzinella → Zavarzinella sp.	1738	Open in IMG/M
3300009012\|Ga0066710_103344986	Not Available	611	Open in IMG/M
3300009094\|Ga0111539_13298205	Not Available	520	Open in IMG/M
3300009100\|Ga0075418_10978438	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	915	Open in IMG/M
3300009100\|Ga0075418_13124041	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300009137\|Ga0066709_101639351	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Zavarzinella → unclassified Zavarzinella → Zavarzinella sp.	918	Open in IMG/M
3300009137\|Ga0066709_102234455	Not Available	753	Open in IMG/M
3300009137\|Ga0066709_102863026	Not Available	638	Open in IMG/M
3300009147\|Ga0114129_11469771	All Organisms → cellular organisms → Bacteria	838	Open in IMG/M
3300009162\|Ga0075423_11289388	Not Available	781	Open in IMG/M
3300009553\|Ga0105249_13138980	Not Available	531	Open in IMG/M
3300009610\|Ga0105340_1240067	Not Available	774	Open in IMG/M
3300009683\|Ga0116224_10388893	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	663	Open in IMG/M
3300009700\|Ga0116217_10555227	Not Available	718	Open in IMG/M
3300009839\|Ga0116223_10809670	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	536	Open in IMG/M
3300010048\|Ga0126373_10140020	Not Available	2287	Open in IMG/M
3300010154\|Ga0127503_10436916	Not Available	503	Open in IMG/M
3300010154\|Ga0127503_11084350	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300010358\|Ga0126370_10719977	Not Available	879	Open in IMG/M
3300010360\|Ga0126372_11634894	Not Available	684	Open in IMG/M
3300010362\|Ga0126377_12699340	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Parasphingorhabdus → Parasphingorhabdus cellanae	572	Open in IMG/M
3300010379\|Ga0136449_100105217	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → unclassified Planctomycetales → Planctomycetales bacterium	5765	Open in IMG/M
3300010379\|Ga0136449_102581536	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	725	Open in IMG/M
3300010379\|Ga0136449_103075384	Not Available	649	Open in IMG/M
3300010379\|Ga0136449_103605437	Not Available	587	Open in IMG/M
3300010398\|Ga0126383_10314533	Not Available	1571	Open in IMG/M
3300010398\|Ga0126383_13017846	Not Available	550	Open in IMG/M
3300011120\|Ga0150983_15187523	All Organisms → cellular organisms → Bacteria	789	Open in IMG/M
3300012210\|Ga0137378_10868895	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Parasphingorhabdus → Parasphingorhabdus cellanae	815	Open in IMG/M
3300012212\|Ga0150985_100393287	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300012212\|Ga0150985_102598905	Not Available	528	Open in IMG/M
3300012212\|Ga0150985_103422636	Not Available	635	Open in IMG/M
3300012212\|Ga0150985_103499815	All Organisms → cellular organisms → Bacteria	873	Open in IMG/M
3300012212\|Ga0150985_103566138	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	562	Open in IMG/M
3300012212\|Ga0150985_103695519	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Cohnella	558	Open in IMG/M
3300012212\|Ga0150985_106458978	Not Available	664	Open in IMG/M
3300012212\|Ga0150985_106497103	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300012212\|Ga0150985_108689875	Not Available	882	Open in IMG/M
3300012212\|Ga0150985_112408281	All Organisms → cellular organisms → Bacteria	780	Open in IMG/M
3300012212\|Ga0150985_113557516	Not Available	815	Open in IMG/M
3300012212\|Ga0150985_116129493	Not Available	517	Open in IMG/M
3300012212\|Ga0150985_116230163	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300012212\|Ga0150985_116234030	Not Available	538	Open in IMG/M
3300012212\|Ga0150985_116236534	Not Available	571	Open in IMG/M
3300012212\|Ga0150985_116240220	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	574	Open in IMG/M
3300012212\|Ga0150985_116331076	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	1369	Open in IMG/M
3300012212\|Ga0150985_116527611	All Organisms → cellular organisms → Bacteria	727	Open in IMG/M
3300012212\|Ga0150985_119280182	Not Available	540	Open in IMG/M
3300012212\|Ga0150985_121304419	Not Available	654	Open in IMG/M
3300012212\|Ga0150985_121490585	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	731	Open in IMG/M
3300012212\|Ga0150985_121847984	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Alienimonas	663	Open in IMG/M
3300012469\|Ga0150984_100804457	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	593	Open in IMG/M
3300012469\|Ga0150984_101538316	Not Available	664	Open in IMG/M
3300012469\|Ga0150984_103605906	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	694	Open in IMG/M
3300012469\|Ga0150984_105542639	Not Available	536	Open in IMG/M
3300012469\|Ga0150984_105620500	Not Available	606	Open in IMG/M
3300012469\|Ga0150984_106073101	Not Available	877	Open in IMG/M
3300012469\|Ga0150984_107259411	Not Available	569	Open in IMG/M
3300012469\|Ga0150984_107517220	Not Available	674	Open in IMG/M
3300012469\|Ga0150984_109804787	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1052	Open in IMG/M
3300012469\|Ga0150984_112633370	Not Available	564	Open in IMG/M
3300012469\|Ga0150984_122128773	Not Available	576	Open in IMG/M
3300012923\|Ga0137359_11323518	Not Available	608	Open in IMG/M
3300012958\|Ga0164299_11081374	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	598	Open in IMG/M
3300012971\|Ga0126369_11016124	Not Available	917	Open in IMG/M
3300012988\|Ga0164306_10860618	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	735	Open in IMG/M
3300014325\|Ga0163163_12051897	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300014501\|Ga0182024_10742324	Not Available	1205	Open in IMG/M
3300014501\|Ga0182024_11789535	Not Available	688	Open in IMG/M
3300015372\|Ga0132256_100250207	All Organisms → cellular organisms → Bacteria	1841	Open in IMG/M
3300015372\|Ga0132256_103683129	Not Available	515	Open in IMG/M
3300015373\|Ga0132257_100165398	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	2601	Open in IMG/M
3300015374\|Ga0132255_104296064	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Gemmata	604	Open in IMG/M
3300015374\|Ga0132255_104890274	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	567	Open in IMG/M
3300016319\|Ga0182033_11488715	Not Available	611	Open in IMG/M
3300016750\|Ga0181505_10953617	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300018466\|Ga0190268_11425337	Polyangium → Polyangium spumosum	595	Open in IMG/M
3300020581\|Ga0210399_11609317	Not Available	501	Open in IMG/M
3300021407\|Ga0210383_10403028	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1180	Open in IMG/M
3300022533\|Ga0242662_10193654	Not Available	637	Open in IMG/M
3300028906\|Ga0308309_10779630	Not Available	831	Open in IMG/M
3300030902\|Ga0308202_1160691	Not Available	506	Open in IMG/M
3300030903\|Ga0308206_1172222	Not Available	534	Open in IMG/M
3300030988\|Ga0308183_1184407	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	534	Open in IMG/M
3300031054\|Ga0102746_10989437	Not Available	662	Open in IMG/M
3300031058\|Ga0308189_10373083	Not Available	581	Open in IMG/M
3300031091\|Ga0308201_10144289	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Anatilimnocola → Anatilimnocola aggregata	739	Open in IMG/M
3300031091\|Ga0308201_10320656	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Hyalangium → Hyalangium minutum	558	Open in IMG/M
3300031561\|Ga0318528_10702766	Not Available	541	Open in IMG/M
3300031708\|Ga0310686_104567828	Not Available	590	Open in IMG/M
3300031819\|Ga0318568_10684351	Not Available	638	Open in IMG/M
3300032076\|Ga0306924_11652798	Not Available	673	Open in IMG/M
3300032160\|Ga0311301_10011727	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	27567	Open in IMG/M
3300032160\|Ga0311301_10155586	All Organisms → cellular organisms → Bacteria	4112	Open in IMG/M
3300032160\|Ga0311301_10704787	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	1418	Open in IMG/M
3300032160\|Ga0311301_12947232	Not Available	514	Open in IMG/M
3300032515\|Ga0348332_11298889	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Tautonia → Tautonia marina	762	Open in IMG/M
3300032515\|Ga0348332_11794150	Not Available	785	Open in IMG/M
3300032515\|Ga0348332_11948378	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1502	Open in IMG/M
3300032515\|Ga0348332_12017481	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	2120	Open in IMG/M
3300032515\|Ga0348332_12222902	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1346	Open in IMG/M
3300034150\|Ga0364933_001687	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	4924	Open in IMG/M
3300034643\|Ga0370545_155610	Not Available	529	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	65.93%
Host-Associated	Host-Associated	34.07%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	62.22%
Plants	Host-Associated → Plants	34.07%
Aquatic	Environmental → Aquatic	3.70%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	57.78%
Rhizoplane	Host-Associated → Plants → Rhizoplane	18.52%
Rhizosphere	Host-Associated → Plants → Rhizosphere	14.81%
Plant Litter	Environmental → Terrestrial → Plant Litter	3.70%
Freshwater	Environmental → Aquatic → Freshwater	2.96%
Sediment	Environmental → Aquatic → Sediment	0.74%
Floodplain	Environmental → Terrestrial → Floodplain	0.74%
Roots	Host-Associated → Plants → Roots	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	42.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	18.52%
Loam	Environmental → Terrestrial → Soil → Loam	13.33%
Soil	Host-Associated → Plants → Rhizosphere → Soil	9.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.19%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	3.70%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.48%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.48%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.48%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.74%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.74%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.44%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	18.52%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	11.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	9.63%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.19%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	3.70%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.48%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.48%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.48%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.48%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.74%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.74%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.74%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.74%

Habitat	Taxonomy	Distribution
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	16.30%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	8.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.15%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.15%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	8.15%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.19%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	5.19%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.44%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.44%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.70%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	3.70%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.22%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.96%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.48%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.48%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.48%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.48%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.48%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.74%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.74%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.74%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.74%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.74%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.74%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.74%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459003	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect MP BIO 1O1 lysis 0-21cm	Environmental	Open in IMG/M
2170459009	Grass soil microbial communities from Rothamsted Park, UK - July 2009 indirect DNA Tissue lysis 0-10cm	Environmental	Open in IMG/M
2170459011	Grass soil microbial communities from Rothamsted Park, UK - July 2009 indirect Gram positive lysis 0-10cm	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004120	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF238 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004615	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 11 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030902	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_356 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030903	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030988	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_157 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031054	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PI 1C (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031091	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300034150	Sediment microbial communities from East River floodplain, Colorado, United States - 25_j17	Environmental	Open in IMG/M
3300034643	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_120 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E4A_09372430	2170459003	Grass Soil	TTREFDCWWEAQGRTTALQNMLDPAPAKLLAWDAWRKGREQLSEATASHRLQLARR
F47_10756120	2170459009	Grass Soil	MTQFSSQVRLHTTKEFDLWWENQGRVAALQILLDPASAKMLAWEAWRKGREQLSEVSATQRLQPARK
F47_02378100	2170459009	Grass Soil	TEGAQIGGATMTQLSKPERLCKTKEFEHWWESQGRANALETMLDPAAAKPLAWEAWRTGREQMSEATASQRLQLARR
F47_11271230	2170459009	Grass Soil	MTPLSSLERLYTTKEFDHWWENQGRVTAVQTMLDPAAAKLLAWEAWRKGREQMLEATASQRLQPARR
F64_06345870	2170459011	Grass Soil	RLHTTKEFEFWWENQGRATAFQTLLDHDSAKWLAWEAWRKGREQLSEASASQRLQPARR
F64_05267080	2170459011	Grass Soil	MFTTKEFERWWESQGQVSALQTMLDPAAAKSLAWDAWRKGREHLSEATASQRLQLARR
F64_04944340	2170459011	Grass Soil	MTQFSNPERPYKTREFEHWWAAQGRVTALEALLNPVAAKPLAWEAWRKGREQMSEATASQRLQPARL
Ga0063454_1002560022	3300004081	Soil	MTQTSTQERLYTTVEFDRWWEAQGRTTALQATLDPASAKHLAWEAWRKGREHLSEATAHHRLQPARR*
Ga0063454_1012027941	3300004081	Soil	MEPAEANAIMSKAEVPETLPSKRKGTPERGGTIMSQQSPRQERLYTTSEFDRWWEAQGRTTALQNMLDPDSAKLLAWEAWRKGREQLSEATAHHRLQPARR*
Ga0062389_1002001636	3300004092	Bog Forest Soil	MTQLSSPERLYKTKEFEHWWESQGRNNALQMMLDPAVAKVLAWEAWRKGREQMSEATAFQRLQLSRK*
Ga0058901_15136801	3300004120	Forest Soil	MSELSSPERLYTTKEFDRWWETQGRATALQTMLDADSAKPLAWEAWRKGREQLSEATTSQRLQLARR*
Ga0068926_13559322	3300004615	Peatlands Soil	MTESISQERLYTTSEFDRWWEAQGRTIALQNMLDPASTELLAWEAWRKGREQLSEATASHRLQPARR*
Ga0058899_122038362	3300004631	Forest Soil	MSQLSNPERLYTTKEFDRWWETQGRATALQTMLDADSAKPLAWEAWRKGREQLSEATTSQRLQLARG*
Ga0066388_1004045163	3300005332	Tropical Forest Soil	MTQGPSQERLYTTGEFDRWWEAQGRATALKNMLDPDSAKLLAWEAWRKGREQLSEATAHHRLQPARR*
Ga0066388_1023014051	3300005332	Tropical Forest Soil	MTQFPSQGRLHTTREFDRWWESEGRVVAVNCNLDADAAKPLAWEAWRKGREQMREATAPE
Ga0066388_1050495172	3300005332	Tropical Forest Soil	MTQGPRQERLYTTGEFDRWWEAQGRTTALKHMLDPDSAKLLAWEAWRKGREQLSEATAHHRLQPARR*
Ga0066388_1063196981	3300005332	Tropical Forest Soil	MSQPATQERLYTTREFDRWWDAQGLATALQATLDPASAKLLAWQAWRKGREQLNEATAAQRLQPAGR*
Ga0066388_1084573031	3300005332	Tropical Forest Soil	MSQQSTGQERLYTTSEFDRWWEAQGRTTALRNMLDPDSAKPLAWEAWRKGREQLSEATAHHRLQPAR
Ga0070734_103868881	3300005533	Surface Soil	MTQLAKPERLYKTKEFEHWWEGQGRANALEAMLDPAAAKPLAWEAWRTGREQMSEATASQRLQLARR*
Ga0066707_103537541	3300005556	Soil	MMPFSSPGRLHTTREFDRWWESEGRVVALQCNLDPDAARPFAWEAWRKGREQMREATASERLQPAPR*
Ga0066670_107928282	3300005560	Soil	MTQTSTQERLYTTVEFDRWWEAQGRTTALQNMLDAAAAKLLAWEAWRKGREHLSEATAHHRLQPARR*
Ga0066702_106666031	3300005575	Soil	MTTSPERLYTTPEFDRWWEAHGRTTALQHLLDIAPARLLAWEAWRRGREHLSEATASRRLQPARP*
Ga0066903_1002408305	3300005764	Tropical Forest Soil	MTQLSSPERLFTTKEFERWWETQGRATALQTLLDPAAAKLLAWEAWRKGREQMSEATASQRLQLAHR*
Ga0066903_1010037271	3300005764	Tropical Forest Soil	MTQLSNPERLHTTKEFDRWWETQGRARALQTNLDPAAAKLFAWEAWRKGREHLSEATASQRLQPAPR*
Ga0066903_1011150282	3300005764	Tropical Forest Soil	MSQQGPRQERLYTTVEFDRWWEAQGRTTALRNMLDPDSAKLLAWEAWRKGREQLSEATAHHRLQPARR*
Ga0066903_1015401993	3300005764	Tropical Forest Soil	MTQGPPQERLYTTGEFDRWWEAQGRTTALKHMLDPDSAKLLAWEAWRKGREQLSEATAHH
Ga0066903_1018637622	3300005764	Tropical Forest Soil	MSQPATQERLYTTREFDRWWDAQGLATALQATLDPASAKLLAWEAWRKGREQLNEATAAQRLQPARG*
Ga0066903_1071573081	3300005764	Tropical Forest Soil	QERLYTTREFDRWWDAQGLATALQATLDPASAKLLAWEAWRKGREQLNEATASQRLQPARR*
Ga0070717_115741982	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	GTLPSKRKGTAERGGTIMSQQSTRQERLYTTSEFDRWWEAQGRTTALQHMLDAAAAKLLAWEAWRKGREHLSEATAHHRLQPARR*
Ga0066660_116814031	3300006800	Soil	MAPSPERLYTTPEFDRWWEVQGRTTALQHLLDAAPARLLAWEAWRKGREQLSQATAAHRLQPARP*
Ga0075436_1015586711	3300006914	Populus Rhizosphere	MTLVSSPERVFTTKEFEHWWESQGKAIAHQTQFDPTAAKFLAWEAWRKGREHMSHATASHRLHLARR*
Ga0079216_104061492	3300006918	Agricultural Soil	MTQTSTQERLYTTVEFDRWWEAQGRTTALQNMLDPASAKLLAWEAWRKGREHLSEATAHHRLQPARR*
Ga0066710_1005550662	3300009012	Grasslands Soil	MTQSSGREWLYTTSEFERWWEDHGRVKAVATGLDPDAAKPLVWEAWRKGREHLSEATAFQRLQPARR
Ga0066710_1033449861	3300009012	Grasslands Soil	MSQLSSEERRYTTKEFDRWWETQGRAQALQAMLDPAPAKLLAWEAWRKGREQMSETTASQRLQLARR
Ga0111539_132982052	3300009094	Populus Rhizosphere	MTHRASQERLYTTSEFDRWWEAQGRTTALQNMLDTASAKLLAWEAWRKGREQLSEATASHRLQLARR*
Ga0075418_109784381	3300009100	Populus Rhizosphere	MTQTSTQERLYTTVEFDRWWEAQGWTTALQTMLDPAAAKLLAWEAWRKGREHLSEATASHRLQPARR*
Ga0075418_131240412	3300009100	Populus Rhizosphere	QERLYTTVEFDRWWEAQGRTTALQNMLDPDSAKLLAWEAWRTGREQLSEATAHHRLQPARR*
Ga0066709_1016393511	3300009137	Grasslands Soil	MTQSSGREWLYTTSEFERWWEDHGRVKAVATELDPDAAKPLVWEAWRKGREHLSEATAFQRLQPARR*
Ga0066709_1022344552	3300009137	Grasslands Soil	KEFDRWWDAQGLPKAVQAALDPAAAKALAWDAWRAGREQLSEATASQRLQPTRR*
Ga0066709_1028630261	3300009137	Grasslands Soil	MAQSAGREWLFTTNDFDRWWEDHGRVQAGALGLDPDAAKPLGWEAWRKGREQLSEATAFQRLQPARR*
Ga0114129_114697712	3300009147	Populus Rhizosphere	MTQTSTQERLYTTVEFDRWWEAQGRTTALQNMLDPAAAKLLAWEAWRKGREHLSEATAHHRLQPARR*
Ga0075423_112893882	3300009162	Populus Rhizosphere	MTQSSGRECLFTTNDFERWWDDHGRVKAVATGLDPDAAKPLAWEAWRKGREQLSEATAFLRLQPARR*
Ga0105249_131389801	3300009553	Switchgrass Rhizosphere	MPASTQERLYTTVEFDRWWEAQGQTTALQNMLDPAAAKSLAWEAWRKGREHLSEATASHRLQLARR*
Ga0105340_12400672	3300009610	Soil	MTQTAGREFLFTTNVFDRWWEDHGRIKAVATGLDPDAAKPIAWEAWRKGREQLNEATAFQRLQPAP
Ga0116224_103888931	3300009683	Peatlands Soil	MTLLFSPERLYTTKEFDSWWENQGRVTALQTMLDTDSAKLLAWEAWRKGREQMSEATASHRLQLARK*
Ga0116217_105552272	3300009700	Peatlands Soil	MSQSTSQEQLYTTSEFDRWWEAQGRTTALQNMLDSAPAKLLAWEAWRKGREQLSEATASHRLQPARR*
Ga0116223_108096701	3300009839	Peatlands Soil	MTQITSQERLYTTTEFDRWWEAQGRTIALQNMLDPASTELLAWEAWRKGREQLSEATASQRLQLARR*
Ga0126373_101400201	3300010048	Tropical Forest Soil	MTPLSSPERLFRTKEFEKWWESQGRATALQAMLDPAAAKPLAWGAWRKGREHLSEATASQRLQVARQ*
Ga0127503_104369161	3300010154	Soil	MTQRTSQERLFTTGEFDRWWEAQGRTTAHQNMLDLEPAKLLAWEAWRKGREQLSEATSHHRLQPARR*
Ga0127503_110843502	3300010154	Soil	MTQTPTQERLYTTVEFDRWWEAQGRSTALQATLDPASAKHLAWEAWRKGREHLSEATASHRLRPSRR*
Ga0126370_107199771	3300010358	Tropical Forest Soil	MPSRRKGTAERGGTIMSQQGPRQERLYTTGEFDRWWEAQGRTTALKHMLDPDSAKLLAWEAWRKGREQLSEATAHHRLQPARR*
Ga0126372_116348941	3300010360	Tropical Forest Soil	MTQGPRQERLYTTGEFDRWWEAQGRTTALKHMLDPDSAKLLAWEAWRKGREHLSEATAHHRLQPARR*
Ga0126377_126993402	3300010362	Tropical Forest Soil	MTQSPTRERLYTTVEFDRWWEAQGRTTALQNMLDPASAKLLAWEAWRKGREHLNEATAHHRLQPARR*
Ga0136449_1001052175	3300010379	Peatlands Soil	MTLTSTPQQLHTTREFDHWWEAQGRVTAFQTLLDHNAAKLLAWEAWRKGREQLSEASSFQRLQPARR*
Ga0136449_1025815362	3300010379	Peatlands Soil	MTQSTSQKRLHTTSEFDRWWEAQGRTIALQNMLDPASTELLAWEAWRKGREQLSEATASQRLQLARR*
Ga0136449_1030753842	3300010379	Peatlands Soil	MMHVRIQERLYTTNEFDHWWENQGRVTAFQTLHDFPSARSLAWEAWRKGREQLSEASSSQRLQPAHR*
Ga0136449_1036054371	3300010379	Peatlands Soil	MTQSTCQERLYTTIEFDRWWEAQGRTTALQNMLDPDSAKLLAWEAWRKGREQLSEATAYH
Ga0126383_103145332	3300010398	Tropical Forest Soil	MTQGPRQERLYTTGEFDRWWEAQGRTTALQNMLDPDSAKLLAWEAWRKGREQLSEATAHHRLQPARR*
Ga0126383_130178461	3300010398	Tropical Forest Soil	MSQQGPRPERLYTTVEFDRWWEAQGRTTALRNMLDPDSAKLLAWQAWRKGREQLSEATAHHRLQPARR*
Ga0150983_151875232	3300011120	Forest Soil	MSELSSPERLYTTKEFDRWWETQGRANALQTMLDPPAAKLLAWEAWRKGREQLSEATASQRLQLARR*
Ga0137378_108688952	3300012210	Vadose Zone Soil	MTQTSTQERLYTTVEFDRWWEAQGRTTALQNVLDPAAAKLLAWEAWRKGREHLSEATAHHRLQPARR*
Ga0150985_1003932872	3300012212	Avena Fatua Rhizosphere	RRAAQSGGTAMTQTSTQERLYTTVEFDRWWEAQGRTTALQHVLDPAAAKLLAWEAWRKGREHLSEATAHHRLQPARR*
Ga0150985_1025989051	3300012212	Avena Fatua Rhizosphere	GTLPCKRETERERNRSKRGATMAQSSRPERLYTTKEFEYWWESQGRASALQTMLDPAPAKLLTWEAWRKGREQMSEATASQRLQLARR*
Ga0150985_1034226361	3300012212	Avena Fatua Rhizosphere	SKRKGTAERGGTIMSQQSTRPERLYTTSEFERWWEAQGRATALQNMLEPDSAKLLAWEAWRKGREQLSEATAHHRLQPARR*
Ga0150985_1034998151	3300012212	Avena Fatua Rhizosphere	MGQSLNQERLYTTKEFDRWWEARGLAAALESMLDPASARLLAWNAWRAGREQLSEVTTAQRLQPARR*
Ga0150985_1035661382	3300012212	Avena Fatua Rhizosphere	YQTGAPPGGATFGGIGMTPTVSPERLFTTPEFGRWWEAQGRTIALQNRLDTPAAKLLAWEAWRKGREHLSEATTTRRLQLARP*
Ga0150985_1036955191	3300012212	Avena Fatua Rhizosphere	QQSPRQERLYTTSEFDRWWEAQGRTTALQNMLDPDSAKLLAWEAWRKGREQLSEATAHHRLQPARR*
Ga0150985_1064589781	3300012212	Avena Fatua Rhizosphere	MTQFSSQERLFTTKEFDLWWENQGRVSAVQALLDPPSAKWLAWEAWRKGREQMNEATASRRLQLARR*
Ga0150985_1064971031	3300012212	Avena Fatua Rhizosphere	EKWHRRAAQSGGTAMTQTSTQERLYTTVEFDRWWECQGRTTALQNVLDPAAAKSLAWEAWRKGREHLSEATAHHRLQPARR*
Ga0150985_1086898752	3300012212	Avena Fatua Rhizosphere	MTQTTTQQRLYTTVEFDRWWEAQGRTTALQNVLDPDAAKFLAWDAWRKGREHLSEATAHHRLQPARR*
Ga0150985_1124082811	3300012212	Avena Fatua Rhizosphere	MTQVSSPERLVKTKEFEQWWESRGRALAIQNMLDPAAAKLLAWEAWRKGREQLSEATASERLQLARR*
Ga0150985_1135575161	3300012212	Avena Fatua Rhizosphere	QADDHGLKGAAMTQSPRQERLHTTKEFDRWWENNGLAIALQATLDPGAVKLLAWEAWRKGREQLMEATASERLLPTRR*
Ga0150985_1161294931	3300012212	Avena Fatua Rhizosphere	GTLPGKRKRIAEWRRNRGAIMTRRTSEARLYTTSEFDRWWEAQGRTTALQHMLDPATAESLASDAWRKGREHLSEATAHHRLQPARR*
Ga0150985_1162301631	3300012212	Avena Fatua Rhizosphere	MTQNTSRNRVYTSVEFDRWWEAQGRPTALQDILDADSAKYLAWEAWRKGREQLSEATASPRLQLARR*
Ga0150985_1162340301	3300012212	Avena Fatua Rhizosphere	GTFQVWGVRQRPAVAQWGGTAMTQPTSQDRVYTTVEFSRWWDAQGRATALQNMLDLDSAKLLAWEAWRKGREPLSEATPSQRLHLARR*
Ga0150985_1162365341	3300012212	Avena Fatua Rhizosphere	GTFHDERSHRQAAAQSGGTAMTQSTIQARVYTTVEFDRWWESQGRSTALQHMLDADSAKLLAWEAWRKGREQLNEATAFQRLQPARR*
Ga0150985_1162402201	3300012212	Avena Fatua Rhizosphere	MTQSTSQRRLYTTAEFDRWWEAQGRPTALQDMLDTDSAKYLAWEAWRKGREQLSEAMASNRLQLARR*
Ga0150985_1163310763	3300012212	Avena Fatua Rhizosphere	MTQSTSQGRVYTTVEFDRWWEVQGRTTALQNMLDPDSAKLLAWEAWRKGREQLSEATASQRLQPARR*
Ga0150985_1165276112	3300012212	Avena Fatua Rhizosphere	MAQSSGEERVYATSEFDRWWQTQGRNDALDANLELAPAKRLAWRAWREGREHMSEATASQRLQPVRR*
Ga0150985_1192801821	3300012212	Avena Fatua Rhizosphere	MTQSTSKGGVYTTVEFDRGWAVEGRSTALQHMLDPDSAKLLAWEAWRKGREQLCEATASQRLQPVRW*
Ga0150985_1213044192	3300012212	Avena Fatua Rhizosphere	MTPVSNPERLYTTKEFDHWWENQGRVTAVQAVLDPAAAKLLAWEAWRKGREQMLEASASQRLQPGRR*
Ga0150985_1214905851	3300012212	Avena Fatua Rhizosphere	AAQSGGTAMTQTSTHERLYTTVEFDRWWEAQGRTSALQNMPDPAAAKLLAWEAWRKGREHLSEATAHHRLQPARR*
Ga0150985_1218479841	3300012212	Avena Fatua Rhizosphere	MGQSLNLERLFTTKEFDRWWEARGLAAALESMLDPASARLLAWNAWRAGREQLSEATAAQRLQPARR*
Ga0150984_1008044572	3300012469	Avena Fatua Rhizosphere	MIHSSTHERLYTTVEFDRWWEAQGRNTALQNMLDLEPAKLLAWEAWRKGREQLSEATAHHRLQPARR*
Ga0150984_1015383161	3300012469	Avena Fatua Rhizosphere	MTQSPRQERLHTTKEFDRWWENNGLAIALQATLDPGAVKLLAWEAWRKGREQLMETTASERLLPTRR*
Ga0150984_1036059062	3300012469	Avena Fatua Rhizosphere	STQERLYTSVEFDRWWEAHGRGTASQRMLDPAAAKSLAWDAWRKGREHLSEATAHHRLQLARR*
Ga0150984_1055426392	3300012469	Avena Fatua Rhizosphere	ETLPSKRKGTPERGGTIMSQQSPRQERLYTTSEFDRWWEAQGRTTALQNMLDPDSAKLLAWEAWRKGREHLSEATAHTRLQPARR*
Ga0150984_1056205002	3300012469	Avena Fatua Rhizosphere	VERLFTTPEFGRWWEAQGHALALQNLLDSPAAKLLAWEAWRKGREHLSEAAAARRLQLARP*
Ga0150984_1060731012	3300012469	Avena Fatua Rhizosphere	MTQTTSQDRVYTTVEFSRWWDAQGRATALQNMLDLDAAKLLAWEAWRKGREHLSEATASQRLQLARR*
Ga0150984_1072594111	3300012469	Avena Fatua Rhizosphere	SSPERLYTTKEFEYWWESQARGNALQTMLDPAAAKLLAWEAWRKGREQMSEATASQRLQLARR*
Ga0150984_1075172203	3300012469	Avena Fatua Rhizosphere	AQSGGTAMTQTSTQERLYTTVEFDRWWEAQRRTTALQNMLDPAAAKSLAWEAWRKGREHLSEATAHHRLQLARR*
Ga0150984_1098047871	3300012469	Avena Fatua Rhizosphere	TVEFDRWWEAQGRTTALQHLLDPAAAKSLAWEAWRKGREHLSEATAHHRLQPARR*
Ga0150984_1126333702	3300012469	Avena Fatua Rhizosphere	MPNKGSQHSRKRLEGGTTMGQSLNQERLFTTKEFDRWWEARGLATALKAMLDPASARLLAWEAWRAGREQLSEATAAQRLHPARR*
Ga0150984_1221287731	3300012469	Avena Fatua Rhizosphere	IVYTSKEFDRWWEGQNLANTLKLDPASAKLLAWEAWRTGREQLHEATASQRLQVSRK*
Ga0137359_113235181	3300012923	Vadose Zone Soil	MTQLSSPERLHTTKEFDRWWETQGRAKALQTNLDPAAAKLLAWEAWRKGREQLSEATCSQRLQLARR*
Ga0164299_110813741	3300012958	Soil	MTQTSTQERLYTTVEFDRWWEAQGRTTALQNMLDPASAKVLAWEAWRKGREHLSEATAHHRLQPAR
Ga0126369_110161243	3300012971	Tropical Forest Soil	MTQGPHQERLYTTGEFDRWWEAQGRTTALKHMLDPDSAKLLAWEAWRKGREQLSEAAAHHRLQPARR*
Ga0164306_108606181	3300012988	Soil	MTQTSTQERLYTTVEFDRWWEAQGRTTALQNLLDPASAKLLAWEAWRKGREHLSEATAHHRLQPARR*
Ga0163163_120518971	3300014325	Switchgrass Rhizosphere	MTQLSSPERLYTTKEFEYWWESQARGDALQTMLDPAAAKLLAWEAWRKGREQMSEATASQRLQLARR*
Ga0182024_107423241	3300014501	Permafrost	MTQSTSQERLYTTSEFDRWWEAQGRTTALQNMLDPAPAKLLAWEAWRKGREQLSEATASHRLQPARR*
Ga0182024_117895351	3300014501	Permafrost	MTSLSSPERLYTTKEFDHWWENQGRVTALQTRLDPTSAKLLAWEAWRKGREQLTEASASQRLQPARR*
Ga0132256_1002502073	3300015372	Arabidopsis Rhizosphere	MTQLSSPERLYKTKEFEQWWASQGRATALQAMLDPAAAKLLAWEAWRKGREHLSEATASQRLQLAPR*
Ga0132256_1036831291	3300015372	Arabidopsis Rhizosphere	MTQSSGREWLFTTSEFDRWWEDHGRVKAVATGLDPDVAKPLVWEAWRKGREQLSEA
Ga0132257_1001653986	3300015373	Arabidopsis Rhizosphere	MTQSSGREWLFTTSEFDRWWEDHGRVKAVATGLDPDVAKPLVWEAWRKGREQLSEVTAFQRLQPARR*
Ga0132255_1042960642	3300015374	Arabidopsis Rhizosphere	MTQLSSPERLYTTKEFEYWWESQGRANALQTMLDPAAAKLLAWEAWRKGREQLSEATASQRLQLARR*
Ga0132255_1048902741	3300015374	Arabidopsis Rhizosphere	MPQSSTQERLYTTVEFDRWWEAQGRTTALQNLLDPAAAKSLAWEAWRKGREHLSEATAHHRLQPARR*
Ga0182033_114887152	3300016319	Soil	MTQGPSQERLYTTGEFDRWWEAQGRSTALKHMLDPDSAKLLAWEAWRKGREQLSEATAHHRLQPARR
Ga0181505_109536171	3300016750	Peatland	MTQSTSQARLYTTIEFDRWWETQGRTTALQNMLDPASAKLLAWEAWRKGREHLSEATASHRLQPARR
Ga0190268_114253371	3300018466	Soil	MTQTSTQERLYTTVEFDRWWEAQGRTTALQNTLDPLAAKLLAWEAWRKGREQLSEATASHRLQPARR
Ga0210399_116093171	3300020581	Soil	LPSKRERTAERRHSRGETIMTQSTSQERLYTTIEFDRWWEAQGRTTALQNMLDLACAKLLAWEAWRKGREHLSEATASHRLQLARR
Ga0210383_104030281	3300021407	Soil	RTAERRHSRGETIMTQSTSQERLYTTIEFDRWWEAQGRTTALENTLDPAAAKLLAWEAWRKGREHLSEATASHRLQLARR
Ga0242662_101936541	3300022533	Soil	GTLPSKRKRTAERRHSRGGTIMTQSPCQERLYTTIEFERWWEAQGRTTALQNMLDTASAKLLAWEAWRKGREQLSEATASHRLQLARR
Ga0308309_107796302	3300028906	Soil	MRQTPNREWLYTTTEFERWWEARGLAEAVENGLDPESAKRLAWDAWRTGREHLSAATASQRLQPARR
Ga0308202_11606911	3300030902	Soil	MTQTSTQDRLYTTVEFDRWWEAQGRTTALQNVLDPAAKSLAWEAWRKGREHLSEATAHHRLQLARR
Ga0308206_11722221	3300030903	Soil	TQERLYTTVEFDRWWEAQGRTTALQHVLDPAAAKLLAWQAWRKGREHLSEATAHHRLQPARR
Ga0308183_11844072	3300030988	Soil	MTQTSTHERLYTTVEFDRWWETQGRTTALQHVLEAAAAKFLAWEAWRKGREHLSEATAHHRLQLARR
Ga0102746_109894371	3300031054	Soil	MTQSATQERLYTTVEFDRWWEAQGRTTALQNMLDIPSAKFLAWEAWRKGREQMSEATAFHRLQPARR
Ga0308189_103730831	3300031058	Soil	MTQSSTQERLYTTVEFDRWWEAQGRTTALQNMLDPAAAKLLAWEAWRKGREHLSEATAHHRLQPARR
Ga0308201_101442891	3300031091	Soil	RDIAQPEKGTADRGGTIMSQQSPRQEPLYTTSEFDRWWEAHGRNTALRNMLDPDLARLLAWEAWRKGREQLSEATAHHRLQPARR
Ga0308201_103206562	3300031091	Soil	MTQTSTQDRLYTTVEFDRWWEAQGRTTALQNVLDPASAKLLAWQAWRKGREHLSEATAHHRLQPARR
Ga0318528_107027661	3300031561	Soil	MTQTTGREWLFTTSEFDRWWEDHGRVKAVATGLDPDAAKPLVWEAWRKGREQLSEAT
Ga0310686_1045678282	3300031708	Soil	MTQFSSPMRLHTTKEFDLWWENQGQVIALQTMLDPTSAKLLAWEAWRKGREQLTEASASQRLQPARR
Ga0318568_106843511	3300031819	Soil	MTQSPRQERLYTTGEFDRWWEAQGRSAALKHMLDPDSAKLLAWEAWRKGREQLSEATAHHRLQPARR
Ga0306924_116527981	3300032076	Soil	MSQQGPRPERVYTTSEFDRWWEAQGRTTALQNMLDPAAAKLLAWEAWRKGREHLSEATASHRLQLARS
Ga0311301_100117272	3300032160	Peatlands Soil	MTLTSTPQQLHTTREFDHWWEAQGRVTAFQTLLDHNAAKLLAWEAWRKGREQLSEASSFQRLQPARR
Ga0311301_101555865	3300032160	Peatlands Soil	MSQSTSQEQLYTTSEFDRWWEAQGRTTALQNMLDSAPAKLLAWEAWRKGREQLSEATASHRLQPARR
Ga0311301_107047872	3300032160	Peatlands Soil	MSQSTSQERLYTTSEFDRWWEAQGRTTALQNMLDPAPVKLLAWEAWRKGREQLSEATASHRLQPARR
Ga0311301_129472321	3300032160	Peatlands Soil	MTQSTCQERLYTTIEFDRWWEDQGRTTAQHNLLDPASAKLLAWEAWRKGREQLSEATAYHRLQPARR
Ga0348332_112988891	3300032515	Plant Litter	RSDSQQGPGRRQKNGTRGVATMTQFSSPMRLHTTKEFDLWWENQGQVIALQTMLDPTSAKLLAWEAWRKGREQLTEASASQRLQPARR
Ga0348332_117941501	3300032515	Plant Litter	DVAQQEKAQRRAAAQSGGPIMTQKTSQERLYTTIEFDRWWEAQGRTTALQNMLDPAAAKLLAWEAWRKGREQLTEATAFHRLQLARR
Ga0348332_119483782	3300032515	Plant Litter	MTQSTSQVRLFTTIEFDRWWEAQGRTTALQNTLDPAAAKVLAWEAWRKGREHLSEATAAQRLQLARR
Ga0348332_120174811	3300032515	Plant Litter	MTEQTSQERLYTTIEFDRWWEAQGRTTALQHMLDPAGAKFLAWEAWRKGREHLSEATAFHRLQLARR
Ga0348332_122229023	3300032515	Plant Litter	MSELSSPERLYTTKEFDRWWETQGRATALQTMLDADSAKPLAWEAWRKGREQLSEAMTSQRLQLARR
Ga0364933_001687_2378_2581	3300034150	Sediment	MTQFSSPGRLHTTREFDRWWEAEGRVVAAHCNLDPDAAKPLAWEAWRKGREQMREATASERLQPAPR
Ga0370545_155610_178_381	3300034643	Soil	MSQLSSPERLYTTKEFDRWWETQGRANALQTMLDPVSAKILAWEAWRTGREQLSEATAAQRLQLARR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F058004

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences