Metagenome / Metatranscriptome Family F058082

Basic Information
Family ID	F058082
Family Type	Metagenome / Metatranscriptome
Number of Sequences	135
Average Sequence Length	79 residues
Representative Sequence	MRPTRSYRGQHLVQGVVHRGLLFGVERVHGAHQNFEGIARKRFLTFVRQSQTDAPPIRLGSLSDQVPTCLKRLDGL
Number of Associated Samples	125
Number of Associated Scaffolds	135

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	6.77 %
% of genes near scaffold ends (potentially truncated)	77.78 %
% of genes from short scaffolds (< 2000 bps)	91.85 %
Associated GOLD sequencing projects	124
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Most Common Taxonomy
Group	Bacteria (94.074 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (20.000 % of family members)
Environment Ontology (ENVO)	Unclassified (25.185 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.889 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 63.46% β-sheet: 0.00% Coil/Unstructured: 36.54%
Feature Viewer

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Pfam ID	Name	% Frequency in 135 Family Scaffolds
PF11953	DUF3470	15.56
PF00037	Fer4	7.41
PF13237	Fer4_10	3.70
PF12800	Fer4_4	2.96
PF04542	Sigma70_r2	2.22
PF01329	Pterin_4a	1.48
PF02657	SufE	1.48
PF04392	ABC_sub_bind	0.74
PF00140	Sigma70_r1_2	0.74
PF12802	MarR_2	0.74
PF07724	AAA_2	0.74
PF00872	Transposase_mut	0.74
PF01883	FeS_assembly_P	0.74
PF01135	PCMT	0.74
PF13649	Methyltransf_25	0.74
PF12838	Fer4_7	0.74
PF10431	ClpB_D2-small	0.74
PF08734	GYD	0.74
PF04545	Sigma70_r4	0.74

COG ID	Name	Functional Category	% Frequency in 135 Family Scaffolds
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	2.96
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	2.22
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	2.22
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	2.22
COG2154	Pterin-4a-carbinolamine dehydratase	Coenzyme transport and metabolism [H]	1.48
COG2166	Sulfur transfer protein SufE, Fe-S cluster assembly	Posttranslational modification, protein turnover, chaperones [O]	1.48
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.74
COG2518	Protein-L-isoaspartate O-methyltransferase	Posttranslational modification, protein turnover, chaperones [O]	0.74
COG2519	tRNA A58 N-methylase Trm61	Translation, ribosomal structure and biogenesis [J]	0.74
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.74
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.74
COG4122	tRNA 5-hydroxyU34 O-methylase TrmR/YrrM	Translation, ribosomal structure and biogenesis [J]	0.74
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.74

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.81 %
Unclassified	root	N/A	5.19 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.81 %
Unclassified	root	N/A	5.19 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.07 %
Unclassified	root	N/A	5.19 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.74 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	31.85 %
Unclassified	root	N/A	5.19 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.74 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	0.74 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	29.63 %
Unclassified	root	N/A	5.19 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.74 %
Alveolata	clade	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata	0.74 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	13.33 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	10.37 %
Unclassified	root	N/A	5.19 %
Dinophyceae	class	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	0.74 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.74 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	13.33 %
Unclassified	root	N/A	5.19 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4.44 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	0.74 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.74 %
Suessiales	order	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	0.74 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	13.33 %
Unclassified	root	N/A	5.19 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.22 %
Symbiodiniaceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae	0.74 %
Pseudolabrys	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys	0.74 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.74 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	13.33 %
Unclassified	root	N/A	5.19 %
Symbiodinium	genus	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	0.74 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.74 %
unclassified Pseudolabrys	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys	0.74 %
Salinispora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Salinispora	0.74 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	13.33 %
Unclassified	root	N/A	5.19 %
Salinispora pacifica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Salinispora → Salinispora pacifica	0.74 %
Pseudolabrys sp. Root1462	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	0.74 %
Symbiodinium microadriaticum	species	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	0.74 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	0.74 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2166559006\|FI_contig15956	All Organisms → cellular organisms → Bacteria	807	Open in IMG/M
2170459016\|G1P06HT02H6AVZ	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	677	Open in IMG/M
2189573000\|GPBTN7E01C73HZ	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300000579\|AP72_2010_repI_A01DRAFT_1059352	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300000580\|AF_2010_repII_A01DRAFT_1007053	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1823	Open in IMG/M
3300001356\|JGI12269J14319_10144122	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1037	Open in IMG/M
3300001545\|JGI12630J15595_10031996	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1084	Open in IMG/M
3300002025\|smpD1_1097971	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300002910\|JGI25615J43890_1098781	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300002917\|JGI25616J43925_10363806	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Salinispora → Salinispora pacifica	534	Open in IMG/M
3300003219\|JGI26341J46601_10120431	Not Available	751	Open in IMG/M
3300003505\|JGIcombinedJ51221_10246610	All Organisms → cellular organisms → Bacteria	726	Open in IMG/M
3300004470\|Ga0068967_1198337	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300005168\|Ga0066809_10105818	Not Available	693	Open in IMG/M
3300005172\|Ga0066683_10515972	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300005332\|Ga0066388_107625804	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300005406\|Ga0070703_10331642	Not Available	644	Open in IMG/M
3300005434\|Ga0070709_10064219	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2347	Open in IMG/M
3300005440\|Ga0070705_101397907	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300005455\|Ga0070663_101148080	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300005467\|Ga0070706_102009779	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300005560\|Ga0066670_10025475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2818	Open in IMG/M
3300005938\|Ga0066795_10136304	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	732	Open in IMG/M
3300006047\|Ga0075024_100507060	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300006051\|Ga0075364_11207471	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300006086\|Ga0075019_11036085	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300006642\|Ga0075521_10240889	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300006846\|Ga0075430_100859313	All Organisms → cellular organisms → Bacteria	747	Open in IMG/M
3300006904\|Ga0075424_102314342	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300009088\|Ga0099830_11407834	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300009090\|Ga0099827_10300787	All Organisms → cellular organisms → Bacteria	1357	Open in IMG/M
3300009090\|Ga0099827_11021254	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300009147\|Ga0114129_12246157	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300009162\|Ga0075423_10763496	All Organisms → cellular organisms → Bacteria	1022	Open in IMG/M
3300009162\|Ga0075423_10796617	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1000	Open in IMG/M
3300009162\|Ga0075423_11383612	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	753	Open in IMG/M
3300009520\|Ga0116214_1167275	All Organisms → cellular organisms → Bacteria	822	Open in IMG/M
3300009521\|Ga0116222_1044861	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1930	Open in IMG/M
3300009610\|Ga0105340_1110972	All Organisms → cellular organisms → Bacteria	1108	Open in IMG/M
3300009637\|Ga0116118_1222793	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300009698\|Ga0116216_10500908	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
3300009698\|Ga0116216_10828435	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300009700\|Ga0116217_10897782	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300009824\|Ga0116219_10791851	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300010040\|Ga0126308_11069136	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300010092\|Ga0127468_1111604	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	535	Open in IMG/M
3300010159\|Ga0099796_10308227	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	673	Open in IMG/M
3300010321\|Ga0134067_10503874	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	502	Open in IMG/M
3300010333\|Ga0134080_10608098	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	533	Open in IMG/M
3300010339\|Ga0074046_10024903	All Organisms → cellular organisms → Bacteria → Proteobacteria	4140	Open in IMG/M
3300010341\|Ga0074045_10778603	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300010360\|Ga0126372_10690890	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	994	Open in IMG/M
3300010360\|Ga0126372_13097047	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	516	Open in IMG/M
3300010366\|Ga0126379_11360270	All Organisms → cellular organisms → Bacteria	816	Open in IMG/M
3300010366\|Ga0126379_13187030	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300010376\|Ga0126381_104908700	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300010379\|Ga0136449_101188096	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1203	Open in IMG/M
3300010396\|Ga0134126_11085483	All Organisms → cellular organisms → Bacteria	893	Open in IMG/M
3300010398\|Ga0126383_12260638	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	630	Open in IMG/M
3300010401\|Ga0134121_11389160	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	712	Open in IMG/M
3300011269\|Ga0137392_11355436	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300011271\|Ga0137393_11457642	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300011992\|Ga0120146_1080849	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300012096\|Ga0137389_11735056	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300012201\|Ga0137365_10796250	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300012202\|Ga0137363_11127164	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300012204\|Ga0137374_10172072	All Organisms → cellular organisms → Bacteria → Proteobacteria	1902	Open in IMG/M
3300012205\|Ga0137362_11179154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	650	Open in IMG/M
3300012205\|Ga0137362_11246396	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300012209\|Ga0137379_10995895	Not Available	743	Open in IMG/M
3300012210\|Ga0137378_10566739	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1044	Open in IMG/M
3300012211\|Ga0137377_11970499	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300012285\|Ga0137370_10384758	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	848	Open in IMG/M
3300012350\|Ga0137372_10808197	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300012353\|Ga0137367_11210324	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300012354\|Ga0137366_10455288	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	927	Open in IMG/M
3300012357\|Ga0137384_10466886	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1038	Open in IMG/M
3300012361\|Ga0137360_11729596	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300012362\|Ga0137361_10821335	All Organisms → cellular organisms → Bacteria	845	Open in IMG/M
3300012362\|Ga0137361_11230722	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300012532\|Ga0137373_10225732	All Organisms → cellular organisms → Bacteria	1526	Open in IMG/M
3300012582\|Ga0137358_10934332	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300012908\|Ga0157286_10203797	Not Available	669	Open in IMG/M
3300012922\|Ga0137394_10910007	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
3300012923\|Ga0137359_11478715	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300012938\|Ga0162651_100081259	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	541	Open in IMG/M
3300012971\|Ga0126369_12545269	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300012971\|Ga0126369_13389208	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	522	Open in IMG/M
3300012986\|Ga0164304_10905224	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300012988\|Ga0164306_11380228	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300013102\|Ga0157371_10743912	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M
3300013308\|Ga0157375_10459417	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1439	Open in IMG/M
3300013501\|Ga0120154_1137084	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300014157\|Ga0134078_10256000	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	736	Open in IMG/M
3300014501\|Ga0182024_12134958	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300015024\|Ga0167669_1150997	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	606	Open in IMG/M
3300015200\|Ga0173480_10508514	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M
3300015373\|Ga0132257_103737060	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	554	Open in IMG/M
3300016270\|Ga0182036_10092840	All Organisms → cellular organisms → Bacteria	2030	Open in IMG/M
3300016404\|Ga0182037_11084564	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300016404\|Ga0182037_11952850	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300016445\|Ga0182038_11455071	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300017997\|Ga0184610_1309376	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300018004\|Ga0187865_1090326	All Organisms → cellular organisms → Bacteria	1139	Open in IMG/M
3300018072\|Ga0184635_10393133	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300018078\|Ga0184612_10555646	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300018081\|Ga0184625_10022745	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3010	Open in IMG/M
3300018085\|Ga0187772_10269384	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1161	Open in IMG/M
3300019188\|Ga0184599_150026	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300020583\|Ga0210401_10712716	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300021420\|Ga0210394_10344602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1309	Open in IMG/M
3300021559\|Ga0210409_10831581	All Organisms → cellular organisms → Bacteria	796	Open in IMG/M
3300022694\|Ga0222623_10142595	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	933	Open in IMG/M
3300025147\|Ga0209511_1328062	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300027288\|Ga0208525_1003631	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1577	Open in IMG/M
3300027310\|Ga0207983_1001126	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2813	Open in IMG/M
3300027729\|Ga0209248_10015055	All Organisms → cellular organisms → Bacteria	2431	Open in IMG/M
3300029817\|Ga0247275_1011009	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	3330	Open in IMG/M
3300031544\|Ga0318534_10864573	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300031561\|Ga0318528_10766969	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300031652\|Ga0315553_10023587	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3840	Open in IMG/M
3300031777\|Ga0318543_10043626	All Organisms → cellular organisms → Bacteria → Proteobacteria	1806	Open in IMG/M
3300031846\|Ga0318512_10088764	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1439	Open in IMG/M
3300031880\|Ga0318544_10425652	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300031890\|Ga0306925_12248485	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300031942\|Ga0310916_11746313	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300031947\|Ga0310909_11060203	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	660	Open in IMG/M
3300031954\|Ga0306926_11929671	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	666	Open in IMG/M
3300033755\|Ga0371489_0245185	All Organisms → cellular organisms → Bacteria	896	Open in IMG/M
3300034115\|Ga0364945_0296029	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300034147\|Ga0364925_0203783	All Organisms → cellular organisms → Bacteria	728	Open in IMG/M
3300034417\|Ga0364941_143614	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300034773\|Ga0364936_125735	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.11%
Host-Associated	Host-Associated	8.15%
Engineered	Engineered	0.74%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.00%
Aquatic	Environmental → Aquatic	11.11%
Plants	Host-Associated → Plants	8.15%
Solid Waste	Engineered → Solid Waste	0.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.56%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.67%
Sediment	Environmental → Aquatic → Sediment	5.93%
Freshwater	Environmental → Aquatic → Freshwater	4.44%
Floodplain	Environmental → Terrestrial → Floodplain	2.96%
Marine	Environmental → Aquatic → Marine	0.74%
Peat	Environmental → Terrestrial → Peat	0.74%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.74%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.74%
Roots	Host-Associated → Plants → Roots	0.74%
Grass	Engineered → Solid Waste → Grass	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	66.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.93%
Loam	Environmental → Terrestrial → Soil → Loam	5.19%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.70%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.96%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	2.96%
Ice	Environmental → Aquatic → Freshwater → Ice	1.48%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.74%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.74%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.74%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.74%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.74%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.74%
Composting	Engineered → Solid Waste → Grass → Composting	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	45.93%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	13.33%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.93%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.44%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.22%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.22%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.22%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.96%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	2.96%
Glacier	Environmental → Aquatic → Freshwater → Ice → Glacier	1.48%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.48%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.74%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	0.74%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.74%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.74%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.74%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.74%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	20.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.41%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.67%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	6.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.44%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.70%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.96%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	2.96%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.48%
Glacier Valley	Environmental → Aquatic → Freshwater → Ice → Glacier → Glacier Valley	1.48%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.48%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.48%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	1.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.48%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.48%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	1.48%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.48%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.48%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.48%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.74%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.74%
Salt Marsh Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh Sediment	0.74%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.74%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.74%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.74%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.74%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.74%
Permafrost And Active Layer Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost And Active Layer Soil	0.74%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.74%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.74%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.74%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.74%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.74%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.74%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.74%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.74%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.74%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2166559006	Grass soil microbial communities from Rothamsted Park, UK - FI (heavy metals 2g/kg) assembled	Environmental	Open in IMG/M
2170459016	Litter degradation ZMR2	Engineered	Open in IMG/M
2189573000	Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO 1O1 lysis 0-21cm (T0 for microcosms)	Environmental	Open in IMG/M
3300000579	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A01	Environmental	Open in IMG/M
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300001545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1	Environmental	Open in IMG/M
3300002025	Permafrost and active layer soil microbial communities from McGill Arctic Research Station (MARS), Canada, for enrichment studies - Sample_D1	Environmental	Open in IMG/M
3300002910	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004470	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 59 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005938	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-191	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006051	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4	Host-Associated	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300009637	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_40	Environmental	Open in IMG/M
3300009695	Glacier valley bacterial and archeal communities from Borup Fiord, Nunavut, Canada, to study Microbial Dark Matter (Phase II) - frozenSSSS metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010092	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300011992	Permafrost microbial communities from Nunavut, Canada - A23_65cm_12M	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012938	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t2i015	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300013501	Permafrost microbial communities from Nunavut, Canada - A35_65cm_0.25M	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015024	Arctic sediment microbial communities from supraglacial cryoconite, Rabots glacier, Tarfala, Sweden (Sample Rb cryoconite)	Environmental	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018004	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_100	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300019188	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZE2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300025147	Glacier valley bacterial and archeal communities from Borup Fiord, Nunavut, Canada, to study Microbial Dark Matter (Phase II) - ?SSSS metaG (SPAdes)	Environmental	Open in IMG/M
3300027288	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC (SPAdes)	Environmental	Open in IMG/M
3300027310	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB (SPAdes)	Environmental	Open in IMG/M
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental	Open in IMG/M
3300029817	Soil microbial communities from Marcell Experimental Forest, Minnesota, USA - Bog25	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031652	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1601-40	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300033755	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB26FY SIP fraction	Environmental	Open in IMG/M
3300034115	Sediment microbial communities from East River floodplain, Colorado, United States - 29_s17	Environmental	Open in IMG/M
3300034147	Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17	Environmental	Open in IMG/M
3300034417	Sediment microbial communities from East River floodplain, Colorado, United States - 17_s17	Environmental	Open in IMG/M
3300034773	Sediment microbial communities from East River floodplain, Colorado, United States - 4_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FI_00727630	2166559006	Grass Soil	MRSTRSYSGQHVVQGVAHRGLLLRVERAHGAHQNFERIARNHFMTFVRQAQSNASPIRLRSLSDQVPTCLKRLDGL
2ZMR_00785260	2170459016	Switchgrass, Maize And Mischanthus Litter	VGAILANTEAPMRPTRSYSGQHFVQRVMHRGSLFRVEQIHRPHQNFERIACKRFFALACQSQTDASPVRLGSLSDQVPTCLKCLD
N55_07889960	2189573000	Grass Soil	MRPARSYRGQHLVQGVVHRGLLFRVERVHGAHQNFERVTRNRFVTFVRQSQTDASPVRLRSLSNQVPTCLKRLDGLCRGAT
AP72_2010_repI_A01DRAFT_10593522	3300000579	Forest Soil	MRPTCGYSGQHFVQRVMHRGSLFRVERVHGAHQNFERITRKRFLTFARQSQTDA
AF_2010_repII_A01DRAFT_10070531	3300000580	Forest Soil	MCPTRSYSGQYLVQGLVHCRLLIRVERVDGAHQNFERITRKRFFALTRQSQADASSVRLGSMADQVPTCLKCLDGLRCGATGGRLKLGESRWVPR
JGI12269J14319_101441221	3300001356	Peatlands Soil	MRPARSYRGQHLLQGVVHRGLLFRVERVHGAHQNFERIARNRFVTFVRQSQTDASPVRLRSLSDQVPTCLKRLDGLCR
JGI12630J15595_100319961	3300001545	Forest Soil	MRPTRSYSGQHLVQGVVHRGLLFRVEQIHRPHQNFERIACKRFFALACQSQTDASPVRLGSLSDQVPTCLKCLDRLR
smpD1_10979712	3300002025	Permafrost And Active Layer Soil	MRPTRSYSGQHLVQGVVHRSLLFRVERVHGAHQNFERIARNRFITFIRQSETDASPIRRG
JGI25615J43890_10987812	3300002910	Grasslands Soil	MRPTRSYSGQHFVQRVVHLGSLFRVERVHGAHQNFERIARKRFLTFARQSQTDASPVRLGSLSDQVPTCLKCLDRLRSGATGG
JGI25616J43925_103638061	3300002917	Grasslands Soil	MRPTRGYSGQHFVQGVVHRGSLFRVERVHGAHQNFERIARKRFFALVRQSQTDASLVRLGSLSDQVPTYLKCLDRLRSGATGGRLKLREGRRGPGERIGAGE
JGI26341J46601_101204312	3300003219	Bog Forest Soil	MRSTRSYSGQXLVQGVSNRGLLLRVERVHGAHQNFERIARNHFMTFVRQAERNASPICLGSLSDQVPTC
JGIcombinedJ51221_102466102	3300003505	Forest Soil	VCFSTEIRAVLAHTKVRMRATRSYSGQYLVQGVAHRGLLLRVERAHGAHQSFERIAGNYFMTFVRQAERDASSISLGSLPDQIPTRLKRLDGL*
Ga0068967_11983371	3300004470	Peatlands Soil	MRPTRSYRGQHVVQGVAHCGLLFRVERLDGAHQSFERIARNRFFAFVRQSESNASPVRLRSLSDQVPTRLKRLDGL*
Ga0066809_101058182	3300005168	Soil	MCPARSYSGQYLVQGAVHRRLLIRVERVDGVHQNFERIARKRLFALTRQSQADASPVRLGSLSDQVPTCLKRLD
Ga0066683_105159721	3300005172	Soil	MRPNRRHDGQHLVQGVVHRGSLFRVERVHGAHQNCKRIARKRCLTLVRKSQTDASPIRLGSLSDQVPTCL
Ga0066388_1076258041	3300005332	Tropical Forest Soil	MRPTCGYSGQHFVQRVMHRGSLVRVERVHGAHQNFERITRKRFLTFARQSQTDAPPVRLGSLSDQVPTCLKC
Ga0070703_103316422	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	VGAILANTEAPMRPTRSYSGQHLVQGVVHRGLLFRVEQIHRPHQNFERIACKRFFALACQSQTDASP
Ga0070709_100642193	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MQGVVHRGSLFHVERVHGAHQNFERIARKCFVTLVGQSQTDASPVRFGSLSDQVPTCLKCPDGLRGGATG
Ga0070705_1013979071	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	VQGVVHRGSLFRVERIHGAHQNIERIARKRFLTLVRQSQTDASPIRLGSLSDQVPTCFERLDGLRCGATSGRLKLRECRWGSGKRVGAGEVAERH
Ga0070663_1011480802	3300005455	Corn Rhizosphere	MCPTRSYSGQHLVQGMVHRRLLICVERVDGVHQYLERIARKRFFAFTRQSQADASPVRLGSLSDQVPTRLKCLDGLRRGATGGRLKLGESRWVPGERIGAGEVAER
Ga0070706_1020097791	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MRPTRSYSGQHLVQGVVHRGSLFRVEQIHRPHQNFERIARKRFFALACQSQTDASPVRLGSLSDQVPTCLKCLDRLRSGATGGRLKLRECRRGPGERIGAGE
Ga0066670_100254751	3300005560	Soil	LVQGVVYRGSLFRIELVHGAHQNFERIACKRFLTFVCQSQTDASPIRLRSLSDQVPTCLKCLDRLRSGATGGRLKLRECRRGPGE
Ga0066795_101363042	3300005938	Soil	MRPTRSYSGQHLVQGVVHRSLLFRVERVHGAHQNFERIARNRFITFIRQSETDASPIRRGSVSDQ
Ga0075024_1005070601	3300006047	Watersheds	LAAPNLFTKVRTVLANTEAPMCPTRSYSGQYLVQGAVHRRLLICVERVDGVHQNFERIARKRFFALTRQSQADASPVRLGSLSDQVPT
Ga0075364_112074711	3300006051	Populus Endosphere	MRPTRSHSGQHLVQGVVHLSSLFRVERVHGTHQNLERIARKRFLTFARQSQTDA
Ga0075019_110360851	3300006086	Watersheds	MRPARSYRGQHLVQGVVHRGLLFRVERVHGAHQNFERIARNRFVTFVRQSQTDASPVRLRSLSNQVPTCLKRLDGLCRGATGRRLKFREC
Ga0075521_102408893	3300006642	Arctic Peat Soil	MRPTRSYSGQHLVQGVVHRSLLFRVERVHGAHQNFERIARNRFITFIRQSETDASPIRRGSVSDQVPTCLKCLDGLRCGATGGRLKL
Ga0075430_1008593132	3300006846	Populus Rhizosphere	VANTEAPMRPTRSYSGQHLVQGVVHRGSLFRIEQIHRPHQNFERIACKRFLTFIRQSQTDASPVRLGSLSDQVPTCLKCLDRLRSGATGGRLKLR
Ga0075424_1023143421	3300006904	Populus Rhizosphere	MCPTRSNSGQHLVQGTVHRRLLIRVERVDGVHKNLERIMRKCFFALTRQSQADASPVRLGSLSHQVPICLKCLDGLRCGATGGRLKLGE
Ga0099830_114078341	3300009088	Vadose Zone Soil	VGAILANTEAPMRPTRGYSGQHFVQGVVHRGSLFRVERVHGAHQNFERIARKRFFALVRQSQTDASLVRLGSLSDQVPTYLKCLDRLRSGATGGRLKLRECRRGP
Ga0099827_103007871	3300009090	Vadose Zone Soil	LVQGVVHRGSFFRVERIHGAHQNFERIARKRFLTLVRRSQTDASPIRLGSLSDQVPTCFERLDGLRCGATSGRLKLR
Ga0099827_110212541	3300009090	Vadose Zone Soil	MRPARSYSGQHVVQGVVHGDLLFRVERVHGAHQNFERIARDHFITFVRQAESDASPIRLGSLSDQVSACLKRLNGL*
Ga0114129_122461572	3300009147	Populus Rhizosphere	MRPTRSYRGQHLVQGVVHRGLLFGVQRVHGAHQNFERIARKRFLTFVRQSQTDAPP
Ga0075423_107634963	3300009162	Populus Rhizosphere	MRPTRGYRGQHLVQGVVHRGLLFGVQQVHGAHQNFERIARKRFLTFVRQSQTDAPPIRLGSLSDQVPTCLKRLNGL*
Ga0075423_107966173	3300009162	Populus Rhizosphere	IAARLSTEVGAILANTEAPMRPSRSYSGQHLVQGVVHRGLLFRVEQIHGAHQNFERIACKRFFSLARQSQTDASPVPGLVA*
Ga0075423_113836121	3300009162	Populus Rhizosphere	VGAILANTEAPMRPTRSYSGQHLVQGVVHRGSLFRIEQIHRPHQNFERIACKRFLTFIRQSQTDASPVRLGSLSDQVPTCLKCLDR
Ga0116214_11672752	3300009520	Peatlands Soil	MCAVRSYRGQHAAKGAVHRGLLFRVERFYGAHQSFERIARDRLFAFVRQSKNNAPPVRLGSLSDQVPTGLKPLDGL*
Ga0116222_10448611	3300009521	Peatlands Soil	VRTVLANTEAPTRSTRGDVRQHLVQGEMHYGSLFRVEQVHGAHQNFKRIVRKRSVALGRQSQTDASAIRLGSLSNQVSTCLECLDGL*
Ga0105340_11109723	3300009610	Soil	MRSTRSYSGQHSVQGVVHRGLLFRVERAHGAHQNFERIARNRFITFVRQSETDVSPIRRGSVSDQVPTCLKCLDGLRCGATGRRL
Ga0116118_12227932	3300009637	Peatland	QAHTEVPMRSTGSYSGQHVVQGVAHRALLLRLERGHGAHQNFERIARNHFIAFVRQAESNASAIRLRSLSDQIPTYLKRLDGL*
Ga0123337_103541031	3300009695	Glacier Valley	MCPTRSDSSQHLVQGVVHRSLLFRVERVHGADQNFERIARNRFITFARQSEID
Ga0116216_105009081	3300009698	Peatlands Soil	MCAVRSYRGQHAAKGAVHRGLLFRVERFYGAHQSFERIARDRLFAFLRQSKNNAPPVRLGSLSDQVPTGLKPLDGL*
Ga0116216_108284351	3300009698	Peatlands Soil	MRPTRSYRGQHVVQGVAHCGLLFRVERLDGAHQSFERIARNRFFAFVRQSESNPSPVRLRSLSDQVPTRLKRLDGL*
Ga0116217_108977821	3300009700	Peatlands Soil	VRTVLANTEAPTRSTRGDVRQHLVQGEMHYGSLFRVEQVHGAHQNFKRIVRKRSVALGRQSQTDASPIRLGSLSNQVSTCL
Ga0116219_107918511	3300009824	Peatlands Soil	MRPTRSYRGQHVVQGVAHCGLLFRVERLDGAHQSFERIARNRFFAFVRQSESN
Ga0126308_110691361	3300010040	Serpentine Soil	MRPTRSYSGHVVQGGVHRDLLFRVERVHGAYQNFERIARKRFLTFVRQSQTDAAPIRLGLLSEQVPTCLKRLNGL*
Ga0127468_11116042	3300010092	Grasslands Soil	MRPTSSYHGQQLMQGLAHRGSLFHVERVHGAHQNFERIARKCFVTFVGQSQTDASPIRLGSLSDQVPTCLKRLYGL*
Ga0099796_103082272	3300010159	Vadose Zone Soil	MRPTRSYRGQHLVQGVVHRGLLFGVERVHGAHQNFERIARKRFLTFVRQSQTDAPPIRLGSLSD
Ga0134067_105038742	3300010321	Grasslands Soil	MARPTRSYSGQHLVQGVVYRGSLFRIELVHGAHQNFERIACKRFLTFVCQSQTDASPIRRRSLSDQVPTCLKCLDRPRSGAT
Ga0134080_106080981	3300010333	Grasslands Soil	MRRTRSYSGQHLVQGVVHRGSLFRVERVHGAHQNFERIARKRFLTFVCQSQTDASPIRRRSLSDQEPTCLKCLDRPRSGATGVA*
Ga0074046_100249031	3300010339	Bog Forest Soil	MQGMAHCGLLFRVQQLHGADENFERIARNRFFPFVGQSESNASPVRLGSLSDQVPTCLQRLDGL*
Ga0074045_107786031	3300010341	Bog Forest Soil	VPKCPTRSYRGQHAAKGAVHRGLLFRVERLYGAHQSFERIARDRLFAFVRQSKNNAPPVRLGSLSDQVPTGLKPLDGL*
Ga0126372_106908903	3300010360	Tropical Forest Soil	MCPTRSYSGQYLVQGLVHYRLLICVERVDGAYQNFERITRKRFFALTRQSQADASSVRLGSLADQVPTCLKCLDGLRCGATSGRLKLGESRWVPRERIGAGEVAERHPLGGTEFA
Ga0126372_130970471	3300010360	Tropical Forest Soil	MRPTRSYRAQQLMQGLAHRGSLFQVERVHGAHQSFERIARECFVTLVGQSQTDASPVRFRSLSDQVPTCLK
Ga0126379_113602701	3300010366	Tropical Forest Soil	VRAVLANAEAPMRSAHCYSGEHLVQGAAHRSLPFRVKRVHGAHQNFERIACKRFFTLVCQAQTDASRVRLGSLSDQVPTCLKCLDRL
Ga0126379_131870301	3300010366	Tropical Forest Soil	MRPTRSYSAQHVAQSVMHRGLLFRVEGVHGTHQNFERIACNRFFALTRQSQTYASPVRPGSLSDQVSTCLKRLNGLR
Ga0126381_1049087002	3300010376	Tropical Forest Soil	LVQGLVHCRLLIRVERVDGAHQNFERITRERFFALTRQSQADASSVRLGSMADQVPTCLKCLDGLRCGATGGRLKLGESRWVPRERIGAGE
Ga0136449_1011880962	3300010379	Peatlands Soil	VPMRSTRSYSGQHVVQGVAHRGLLLRLERGHGAHQNFERIARNHFMTFVRQAESNASPIRLGSLSDQVPTCLKRLDGL*
Ga0134126_110854831	3300010396	Terrestrial Soil	MRPTRSYRGQHLVQGVVHRGLLFGVERVHGAHQNFEGIARKRFLTFVRQSQTDAPPI
Ga0126383_122606382	3300010398	Tropical Forest Soil	MRPTRSHSGQHLVQGVVHLSSLFRIERVHGAHQNLERIARKRFVTFVRQSQTDASPVRLGSLSDQVPTCLKCLDR
Ga0134121_113891601	3300010401	Terrestrial Soil	STEGRAVLANTEAPMRPTRSYRGQHLVQGVVHRGLLFGVERVHGAHQNFEGIARKRFLTFVRQSQTDASPICLGSLSDQVPTCLKCLDRLRSGATGSRLKLRKCRRGPGE*
Ga0137392_113554361	3300011269	Vadose Zone Soil	MRPIRSYSGQHVVHGVMHRGLLFRLERAHGAHQNFEWIARNRFVTFVRQSETDASPIRLGSVSDQVPTCLKRLNSLRCGATGGRLKLGECRWVPGELVGAGEVAERHPL
Ga0137393_114576422	3300011271	Vadose Zone Soil	MRPTRSYSGQHFVQRVVHLGSLFRVERVHGAHQNFERIARKRFLTFARQSQTDASPVRLGSLSDQVPTCLKCLDRLRSGATGGRLKLRE
Ga0120146_10808491	3300011992	Permafrost	MRPTRSYSGQHLVQGVVHRSLLFRVERVHGAHQNFERIARNRFITFARQSETDASPI
Ga0137389_117350561	3300012096	Vadose Zone Soil	MRPTRSYRGQHVMQGVMHRGLHFGVERVHGAHQSFERIARNRFVTFVRQSESDTSPIRLGSLSDQVPTCLKCLDG
Ga0137365_107962502	3300012201	Vadose Zone Soil	LVQGVVHRGSLFRVERIHGAHQNFERIARKRFLTLVRQSQTYASPIRLGSLSDQVPTCFERLDGLRCGATSGRLKLRECRWGSGKRVGAGE
Ga0137363_111271642	3300012202	Vadose Zone Soil	MRPTRSYGGQHLVQGVAHRDLLFRVERVHGAHQNFERIARNRFVTFVRQSQTYASPIRLGSLSDQVSNCLKRLDGL*
Ga0137374_101720725	3300012204	Vadose Zone Soil	MRPTRSYRGQHLVQGVVRRGLLFGVQRVHGAHQNFERIARKRFLTFVRQSQTDAPPIRLGSLSDQVPT
Ga0137362_111791541	3300012205	Vadose Zone Soil	VGAILANTEAPMRPTRSYSGQHFVQGVVHRGSLFRVERVHGAHQNLERIARKRFLTFVRQSQTDAPPIRLGSLSDQVPTCLK
Ga0137362_112463962	3300012205	Vadose Zone Soil	MRPTRSYRGQHLVQGVVHRGLLFGVERVHGAHQNFERIARKRFLTFVRQSQTDAPPIRLGSLSDQVPT
Ga0137379_109958952	3300012209	Vadose Zone Soil	MRPTRSYRGQHLVQGVVHRGLLFGVQRVHGAHQNFERIARKRFLTFVRQSQTDAPPIRLGSLSDQV
Ga0137378_105667391	3300012210	Vadose Zone Soil	MRPTRNYSGQHLVQGVVYRGSLFRIELVHGAHQNFERIACKRFLTFVCQSQTDASPVRLRSLSDQVPTCLKCLDRLRNGATGGRLKLRK
Ga0137377_119704992	3300012211	Vadose Zone Soil	MRRTRSYSGQHLVQGVVHRGSLFRVERVHGAHQNFERIACKRFLTFARQSQTDASPVRLGSL
Ga0137370_103847581	3300012285	Vadose Zone Soil	LVQGVVYRGSLFRIELVHGAHQNFERIACKRFLTFVCQSQTDASPIRRRSLSDQVPTCLKCLDRPRSGATGVA*
Ga0137372_108081972	3300012350	Vadose Zone Soil	MRPNRSESGQHLVQGVVHRGSLFRVERIHGAHQNFERIARKRFLTLVRQSQTYASPIRLGSLSDQVPTCFERLDGLRCGATSGRLKLRECRWGSGK
Ga0137367_112103241	3300012353	Vadose Zone Soil	MRPNRRHDGQHLVQGVVHRGSLFRVERVHGAHQNCKRIARKRCLTLVSKSQIDASPIRLGSLSDQVPTCLERLDGLRCGATSGR
Ga0137366_104552881	3300012354	Vadose Zone Soil	AHLSTEVGAIVANTEAPMRPTRSYSGQHLVQGVVYRGSLFRIELVHGAHQNFERIACKRFLTFVCQSQTDASPIRRRSLSDQVPTCLKCLDRPRSGATGVA*
Ga0137384_104668862	3300012357	Vadose Zone Soil	MAHMARPTRSYSGQHLVQGVVYRGSLFRIELVHGAHQNFERIACKRFLTFVCQSQTDASPIRRQSLSDQVPTCLKCLDRPRSGATGVA*
Ga0137360_117295961	3300012361	Vadose Zone Soil	MRPTRSYSGQHLVQGMVHRGLLFRVERAHGAHQNFERIARNRFVTFLRQSESDA
Ga0137361_108213351	3300012362	Vadose Zone Soil	MRPTRSYSGQHFVQRVVHLGSLFRVERVHGAHQNFERIARKRFLTFARQSQTDASPVRLGSLSDQVPTCLKRLDGLRCGATGGRLKLRECRRGPGERIGAGEV
Ga0137361_112307221	3300012362	Vadose Zone Soil	MRPTRSYSGQHLVQGVVHRGLLFRVERAHGAHQNFERIARNRFVTFVRQSESDASP
Ga0137373_102257322	3300012532	Vadose Zone Soil	MRPTRSYSGQHLVQGVVHRGSLFRVERVHGAHENFKRIARKRFVTFVRQSETDASPIRLGSVSDQVPTCLERFNGL*
Ga0137358_109343321	3300012582	Vadose Zone Soil	MRPTRGYSGQHFVQGVMHRGSLVRVERVHGAHQNFERIARKRSLTFARQSQTDA
Ga0157286_102037972	3300012908	Soil	MRPTRSYRGQHLVQGVVHRGLLFGVERVHGAHQNFEGIARKRFLTFVRQSQTDAPPIRLGSLSDQVPTCLKRLNGL*
Ga0137394_109100071	3300012922	Vadose Zone Soil	MRPTRSYSGQHLVQGVVHRGSLFRVERVNGTHQNFERIACKRFLTFARQSQTDASPVRLGSLSDQVPTCLKR
Ga0137359_114787151	3300012923	Vadose Zone Soil	MRPTRSYRGQQLMQGLAHRSSLFQVERVHGAHQNFERIARKCFVTLVGQSQTDASPVRFGSLSDQVPTCLKCLDSLRRSATGGRLKRRECRRGSGEGIGAAK
Ga0162651_1000812591	3300012938	Soil	MRPTRSYRGQHLVQGVVHRGLLFGVERVHGAHQNFERIARKRFLTFVRQSQTDAPPIRLGSLS
Ga0126375_114599931	3300012948	Tropical Forest Soil	MCTTRSDSGQHLVQGLVHRRLLIRVERVDGVYQNLEWITRKRFFALTRQSQADASSVRLGTLADQVPTCLKCLDGLRCGATGGRLELGESRWVPRERIGAGEVAERHPLGGTEFAVIAFG
Ga0126369_125452692	3300012971	Tropical Forest Soil	VVQGVVHRGLLFRVEQIHGAHQNFERIACKRFFSFARQSQTDASPVRLRSLSDQVPTCLKCLDRLRSGATGGRLK
Ga0126369_133892082	3300012971	Tropical Forest Soil	VGAILANTEAPMRPTRSYSGQHFVQRVMHLGSLFRVEQIHRPHQNFERIACKRFLTFIRQSQTDASPV
Ga0164304_109052241	3300012986	Soil	MRPARSYRGQHLVQGVVHRGLLFRVERVHGAHQNFERVTRNRFVTFVRQSQTDASPVRLRSLSNQVPTCLKRLDGLCRGATGRRLKFRECGRSAGKRVGAGEEAQRHPL
Ga0164306_113802281	3300012988	Soil	MCSTRSYSGQHVVQSVAHRGLLLRVERVHGAHQNFERIARNRFMTFIRQAESNASPIRLR
Ga0157371_107439122	3300013102	Corn Rhizosphere	MRPTRSYRGQHLVQGVVHRGLLFGVERVHGAHQNFEGIARKRFLTFVRQSQTEAPPIRLGSLSDQVP
Ga0157375_104594171	3300013308	Miscanthus Rhizosphere	MCPTRSYSGQHLVQGMVHRRLLICVERVDGVHQYLERIARKRFFAFTRQSQADASPVRLGSLSDQVPT
Ga0120154_11370842	3300013501	Permafrost	MRPTRSYRGQHLVQGVVHRGLLFRVERVHGAHQNFERIAHNHFVTFVRQSQTDASPVRLRSLSDQVPTCLKRLYG
Ga0134078_102560001	3300014157	Grasslands Soil	GQHLVQGVVYRGSLFRIELVHGAHQNFERIACKRFLTFVCQSQTDASPIRRRSLSDQVPTCLKCLDRLRSGATGVA*
Ga0182024_121349581	3300014501	Permafrost	VVQGVAHRGLRLRVERVHDAHQNFERIARNYFMTFVGQAESNASPIRLRSLSNQIPTCLKRLDGL*
Ga0167669_11509972	3300015024	Glacier Forefield Soil	MCPTRSDSGQHLVQGVVHRSLLFRVERVHGSHQNFERIARNRFITFARQSEIDASPICRGSASDQVPSCLKCLDG
Ga0173480_105085142	3300015200	Soil	MRPTRSYRGQHLVQGVVHRGLLFGVERVHGAHQNFERIARKCFLTFVRQSQTDAPPIGLGSLSDQVRTCLKRLNGLRCGATGGRLKFR
Ga0132257_1037370601	3300015373	Arabidopsis Rhizosphere	VGAILANTKAPMRPTRSYSGQHLVQGVVHRGSLFGVERVHCAHQNFERIARKRFVTLVRQSQSDAPPIRLGAGRCKSGEAESFCKEL
Ga0182036_100928405	3300016270	Soil	VRAVLANAEAPMRSAHCYSGEHLVQGAAHRSLPFRVKRVHGAHQNFERIACKRFFALARQSQTYASPIRLRWLSNQLPTCLK
Ga0182037_110845641	3300016404	Soil	MQGIVYRGLLSRVERAHGAHQSFERIARYHFMAYVRQAERDASSVSLGSLPDQIPGCLKRLDGLRCGATSRCLKVRERGRGPRE
Ga0182037_119528502	3300016404	Soil	MRPTSSYRGQQLMQSLAHRGSLVQVERVHGAHQNFERIARECFVTLVGQSQTDASPVRFRSLSDQVPTCLKCLDGLRRSATGGRLKRRECRRGSGEGIGAGEIAERHP
Ga0182038_114550712	3300016445	Soil	MCPTRSYSGQHLVQRLVHRRLLMRVECVDGAHQNFERITRKRFFALTRQPQADASPVRLGSLAGQVPTRLKCHDSLRCGATGGRLKLGESRWVPRERIGTGEVAERHPLG
Ga0184610_13093761	3300017997	Groundwater Sediment	MRPTRSYRGQHLVQGVVHRGLLLRVERVHGSHQNFERIARKRFVTFVRQSQTDASPVRLR
Ga0187865_10903262	3300018004	Peatland	FFTKVRAVLAHTEVPMRSTGSYSGQHVVQGVAHRGLLVRVERVHSAYQNFERIARNHFMTFVRQAESNASPIRLRSLSDQIPTCLKRLDGL
Ga0184635_103931332	3300018072	Groundwater Sediment	MCPTRSYSGQHLVQGMVHRRLLIRVERVDGVHQNFERIARKRFFALTRQSQADTSPVRLGSLSDQVPTCLKRLDGLRCGATGGRLKLGESRWVPGER
Ga0184612_105556461	3300018078	Groundwater Sediment	MCPARSYSGQHLVQGMVHRHLLIRVERVDGAHQILERIARKRFFALTRQSQTDASPVRLGSLSDQVPTCLKCLDGLRCGATGGRLKLGESRW
Ga0184625_100227451	3300018081	Groundwater Sediment	MRPTRSYSGQHVVQGIMHRGLLFRVERAHGAHQNFERIACNRFFALTRQSQTYASAVRLGSLSDQVSTCLKRLNG
Ga0187772_102693841	3300018085	Tropical Peatland	VQGVVHRGLLFQIERVHGAHQNFERIARKRFLALVVQAQSNASPVRLGSLPDQVPTRLKRLDGL
Ga0184599_1500262	3300019188	Soil	MRSTRSYCGQHVVQGVAHRGLLLRVERAHGAHQNFERIALNHFMTFIRQAKSNASPIRRRSLSDQIPTSLKRLNGL
Ga0210401_107127161	3300020583	Soil	MRTTRSYGGQHLVQGAAHRSPLFRVEQIYGAHQNFERIACKRFFALARQSQTYASLIRLRWLSNQVPTFLKQ
Ga0210394_103446022	3300021420	Soil	MRTTRSYSGQHLVQGAAHRSSLFRVEQIYGAHQNFERIACKRFFAFAGQSQTYRRTAGS
Ga0210409_108315811	3300021559	Soil	CNTDLPMRTTRSYSGQHLVQGAAHRSSLFRVEQIYGAHQNFERIACKRFFALAGQSQTYRRTAGS
Ga0222623_101425953	3300022694	Groundwater Sediment	CPTRSYSGQHLVQGLVHRRLLIRVERIDGAHQNFERITRKRFFSLTRQSQADASSVRLGSLGGPSIHLPQVP
Ga0209511_13280621	3300025147	Glacier Valley	STEVRAVLANTEAPMCPTRSDSGQHLVQGVVHRSLLFRVERVHGAHQNFERIASNRFITLVPQSETDASAIRRGSASYQVPPGLK
Ga0208525_10036311	3300027288	Soil	VGAILANTEAPMRPTRSYSGQHLVQGVVHRGSLFRVEQIHRPHQNFERIACKRFFALACQSQTDASPVRLGSLSDQVPTCLKCLDRLRSGATGGRLKFRECRRGPG
Ga0207983_10011261	3300027310	Soil	VGAILANTEAPMRPTRSYRGQHLVQGVVHRGLLFGVERVHGAHQNFERIARKRFLTFVRQSQTDAPPIRLGSLSDQVPTCLKRLN
Ga0209248_100150551	3300027729	Bog Forest Soil	MCPTRSHRGQHVVQGVVHRGLLFRVERVHGAHQNFERIARNRFFAFVRQSEGDASPVRLGSLSDQVPTC
Ga0247275_10110091	3300029817	Soil	MRSTRSYSGQHVVQGVAHRGLLVRVERVHSAYQNFERIARNHFMTFVRQAESNASPIRLRSLSDQIPTCLKRLDGL
Ga0318534_108645731	3300031544	Soil	MCPTRSYSGQYLVQGLVHCRLLIRVERVDGAHQNFERITRKRFFALTRQSQADASSVRLASLADQVPTCLKCLDGLRCGATGGRLK
Ga0318528_107669692	3300031561	Soil	MCPTRSYSGQHLVQGFVHRRLLIRVERVDGAHQNFERITRKRFFALTRQSQADASSVGLGSMADQVPTCLKCLDGLRCGATGGRLKLGESRWVPRERIGAGEVAER
Ga0315553_100235876	3300031652	Salt Marsh Sediment	MRPARSYSGQHAVQGVMHRGLLLRVERIHGAHQNFERIARKRFITLFCQLQTDASPVCPGLPSDQVPACLERLDGL
Ga0318543_100436261	3300031777	Soil	EVSTFPTRRYCGQHATQGTVHRGLLLRVERVHGAHQSFERIACNRFLAFVRQSETNASPVHLGSLSDQVASRLKHLDDL
Ga0318512_100887641	3300031846	Soil	MRPTCGYSGQHFVQRVMHRGSLFRVERVHGAHQNFERITRKRFLTFARQSQTDASLVRLGSLSDQVPTCLKC
Ga0318544_104256521	3300031880	Soil	MRPTRSDSGQHLVQGVAHRGLLLPVERAHGAHQSFERIARNYFMTFVRQAERDASSISLGSLPDQIPTRLKRLDGLRCGAT
Ga0306925_122484852	3300031890	Soil	MRPTSSYRGQQLMQSLAHRGSLVQVERVHGAHQNFERIARECFVTLVGQSQTDASPVRFRSLSDQVPTCLKCLDGLRRSATGGRLKRRECRRGSGEGIGAGEVAER
Ga0310916_117463131	3300031942	Soil	MCPTHSYSGQYLVQGMVHRRLLIRVERVDGVHQNFERIARKRFFALRRQSQADASPVHLGSLSDQVPTFLKCLDGLRRGAT
Ga0310909_110602031	3300031947	Soil	MRPTRSYSGQYLVQGAVHRGLLFRIERTHSAHQNFERIACKRFLPLARQSQIDASPVRLGSLSDQVPTRLKRFD
Ga0306926_119296711	3300031954	Soil	MRPSRSHSAQHPVQGMVHRGLLFRVEYVYGAHQSFERIAGERLLALARKSQTDASPVRLGSVA
Ga0371489_0245185_254_484	3300033755	Peat Soil	MCPTGSYRGQHAAQGAVHRGLLFWVERVHGAHQSFERIARYRFFAFVRQSENNASPVRLGSLSDQVPARLEHLDGL
Ga0364945_0296029_190_420	3300034115	Sediment	MRPTRSYRGQHLVQGVVHRGLLFGVERVHGAHQNFEGIARKRFLTFVRQSQTDAPPIRLGSLSDQVPTCLKRLNGL
Ga0364925_0203783_485_679	3300034147	Sediment	VQGVVHHGLLFHVERVHRAHQNFERIARKRFFALILQAQSNASPVRLGSLSDQVPTCLKRLDGL
Ga0364941_143614_5_235	3300034417	Sediment	MRPTRSYRGQHLVQGVVHRGLLFGVERVHGAHQNFEGIARKRFLTFVRQSQTDAPPIRLGSLSDQVPTCLKRLDGL
Ga0364936_125735_2_229	3300034773	Sediment	MRPTRSYSGQHLVQGVVHVGSLFRVERIHGAHQNLERIARKRFVTFARQSQTDASPVRLGSLSDQVPTCLECLDRL

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F058082

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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