Metagenome / Metatranscriptome Family F058155

Basic Information
Family ID	F058155
Family Type	Metagenome / Metatranscriptome
Number of Sequences	135
Average Sequence Length	64 residues
Representative Sequence	GSRLFTLRLLFIHSPAVSFLTSPALGSFSRGLPSLRDLPGADALFVPPFGVFLLAVPTFY
Number of Associated Samples	118
Number of Associated Scaffolds	135

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.85 %
% of genes near scaffold ends (potentially truncated)	77.78 %
% of genes from short scaffolds (< 2000 bps)	85.93 %
Associated GOLD sequencing projects	115
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.18

Most Common Taxonomy
Group	Unclassified (87.407 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (29.630 % of family members)
Environment Ontology (ENVO)	Unclassified (28.889 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (44.444 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 10.23% β-sheet: 0.00% Coil/Unstructured: 89.77%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 135 Family Scaffolds
PF00072	Response_reg	0.74
PF01066	CDP-OH_P_transf	0.74
PF00216	Bac_DNA_binding	0.74
PF07394	DUF1501	0.74
PF01650	Peptidase_C13	0.74

COG ID	Name	Functional Category	% Frequency in 135 Family Scaffolds
COG0558	Phosphatidylglycerophosphate synthase	Lipid transport and metabolism [I]	0.74
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	0.74
COG1183	Phosphatidylserine synthase	Lipid transport and metabolism [I]	0.74
COG5050	sn-1,2-diacylglycerol ethanolamine- and cholinephosphotranferases	Lipid transport and metabolism [I]	0.74
COG5206	Glycosylphosphatidylinositol transamidase (GPIT), subunit GPI8	Posttranslational modification, protein turnover, chaperones [O]	0.74

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.41 %
All Organisms	root	All Organisms	12.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.41 %
cellular organisms	root	All Organisms → cellular organisms	12.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.41 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	11.85 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.41 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	8.15 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.48 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.74 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.41 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	8.15 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.74 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.74 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.41 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	8.15 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.74 %
unclassified Terriglobia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia	0.74 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.41 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	8.15 %
Acidobacteriia bacterium 12-62-4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium 12-62-4	0.74 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	0.74 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.41 %
Verrucomicrobia subdivision 3	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	8.15 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	0.74 %
Acidobacteriia bacterium 12-62-4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium 12-62-4	0.74 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.41 %
unclassified Verrucomicrobia subdivision 3	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3	7.41 %
Pedosphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera	0.74 %
unclassified Pseudomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas	0.74 %
Acidobacteriia bacterium 12-62-4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium 12-62-4	0.74 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.41 %
Verrucomicrobia subdivision 3 bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	7.41 %
Pseudomonas sp. GM78	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. GM78	0.74 %
Pedosphaera parvula	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	0.74 %
Acidobacteriia bacterium 12-62-4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium 12-62-4	0.74 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.74 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001448\|JGI20219J14954_1013807	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	509	Open in IMG/M
3300002647\|Ga0005469J37257_100118	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. GM78	507	Open in IMG/M
3300002671\|Ga0005481J37269_102199	Not Available	538	Open in IMG/M
3300004104\|Ga0058891_1019971	Not Available	524	Open in IMG/M
3300006426\|Ga0075037_1155244	Not Available	537	Open in IMG/M
3300006861\|Ga0063777_1018318	Not Available	505	Open in IMG/M
3300007526\|Ga0075022_1079319	Not Available	523	Open in IMG/M
3300009579\|Ga0115599_1172942	Not Available	556	Open in IMG/M
3300009661\|Ga0105858_1199119	Not Available	588	Open in IMG/M
3300010858\|Ga0126345_1186039	Not Available	519	Open in IMG/M
3300010866\|Ga0126344_1259230	Not Available	523	Open in IMG/M
3300011028\|Ga0138577_110386	Not Available	505	Open in IMG/M
3300011038\|Ga0138547_104307	Not Available	502	Open in IMG/M
3300011040\|Ga0138587_105578	Not Available	505	Open in IMG/M
3300011057\|Ga0138544_1104860	Not Available	513	Open in IMG/M
3300011066\|Ga0138524_1104958	Not Available	502	Open in IMG/M
3300011086\|Ga0138564_1232130	Not Available	512	Open in IMG/M
3300011089\|Ga0138573_1067123	Not Available	543	Open in IMG/M
3300011109\|Ga0138539_1051428	Not Available	510	Open in IMG/M
3300011120\|Ga0150983_11464698	Not Available	505	Open in IMG/M
3300011120\|Ga0150983_13457829	Not Available	517	Open in IMG/M
3300011340\|Ga0151652_10918400	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	536	Open in IMG/M
3300012203\|Ga0137399_10251539	Not Available	1449	Open in IMG/M
3300012400\|Ga0134048_1384174	Not Available	501	Open in IMG/M
3300012409\|Ga0134045_1131700	Not Available	500	Open in IMG/M
3300012768\|Ga0138276_1180784	Not Available	505	Open in IMG/M
3300012770\|Ga0138291_1155841	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	517	Open in IMG/M
3300012778\|Ga0138269_1282965	Not Available	502	Open in IMG/M
3300012778\|Ga0138269_1391658	Not Available	544	Open in IMG/M
3300013295\|Ga0170791_11038954	Not Available	502	Open in IMG/M
3300014502\|Ga0182021_13608273	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	514	Open in IMG/M
3300014838\|Ga0182030_10088494	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	4392	Open in IMG/M
3300016698\|Ga0181503_1089384	Not Available	507	Open in IMG/M
3300016700\|Ga0181513_1172795	Not Available	551	Open in IMG/M
3300019155\|Ga0184568_102771	Not Available	517	Open in IMG/M
3300019164\|Ga0184582_106799	Not Available	513	Open in IMG/M
3300019164\|Ga0184582_115291	Not Available	507	Open in IMG/M
3300019167\|Ga0184571_102454	Not Available	505	Open in IMG/M
3300019170\|Ga0184570_107867	Not Available	511	Open in IMG/M
3300019174\|Ga0184579_102366	Not Available	503	Open in IMG/M
3300019174\|Ga0184579_119909	Not Available	508	Open in IMG/M
3300019178\|Ga0184583_109177	Not Available	510	Open in IMG/M
3300019182\|Ga0184598_126663	Not Available	500	Open in IMG/M
3300019240\|Ga0181510_1442378	Not Available	517	Open in IMG/M
3300019249\|Ga0184648_1494363	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	502	Open in IMG/M
3300021128\|Ga0214176_1022071	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	612	Open in IMG/M
3300021181\|Ga0210388_11558243	Not Available	550	Open in IMG/M
3300021286\|Ga0179583_1061512	Not Available	521	Open in IMG/M
3300021315\|Ga0179958_1151901	Not Available	505	Open in IMG/M
3300021315\|Ga0179958_1207184	Not Available	513	Open in IMG/M
3300021405\|Ga0210387_10258030	All Organisms → cellular organisms → Bacteria	1526	Open in IMG/M
3300021853\|Ga0210323_1033563	Not Available	511	Open in IMG/M
3300021856\|Ga0213850_1023456	Not Available	503	Open in IMG/M
3300021857\|Ga0213849_1025382	Not Available	514	Open in IMG/M
3300021858\|Ga0213852_1103588	Not Available	510	Open in IMG/M
3300021967\|Ga0213848_1239071	Not Available	556	Open in IMG/M
3300022500\|Ga0242643_115059	Not Available	592	Open in IMG/M
3300022503\|Ga0242650_1027081	Not Available	503	Open in IMG/M
3300022512\|Ga0242676_1053868	Not Available	507	Open in IMG/M
3300022512\|Ga0242676_1055062	Not Available	504	Open in IMG/M
3300022530\|Ga0242658_1250092	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	501	Open in IMG/M
3300022532\|Ga0242655_10167783	All Organisms → cellular organisms → Eukaryota → Opisthokonta	653	Open in IMG/M
3300022714\|Ga0242671_1069511	Not Available	620	Open in IMG/M
3300022715\|Ga0242678_1076446	Not Available	526	Open in IMG/M
3300022717\|Ga0242661_1037105	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium 12-62-4	865	Open in IMG/M
3300022722\|Ga0242657_1237738	Not Available	518	Open in IMG/M
3300023533\|Ga0247537_103360	Not Available	506	Open in IMG/M
3300023551\|Ga0247546_105396	Not Available	537	Open in IMG/M
3300023669\|Ga0247539_103166	Not Available	508	Open in IMG/M
3300023673\|Ga0247534_101109	Not Available	820	Open in IMG/M
3300023684\|Ga0247523_117605	Not Available	520	Open in IMG/M
3300028800\|Ga0265338_10209253	Not Available	1465	Open in IMG/M
3300029701\|Ga0222748_1137938	Not Available	505	Open in IMG/M
3300030531\|Ga0210274_1470740	Not Available	501	Open in IMG/M
3300030535\|Ga0210285_1403300	Not Available	589	Open in IMG/M
3300030535\|Ga0210285_1440595	Not Available	580	Open in IMG/M
3300030539\|Ga0210281_1097276	Not Available	532	Open in IMG/M
3300030545\|Ga0210271_10002281	Not Available	500	Open in IMG/M
3300030572\|Ga0210258_10856090	Not Available	533	Open in IMG/M
3300030597\|Ga0210286_1304789	Not Available	522	Open in IMG/M
3300030602\|Ga0210254_10327496	Not Available	510	Open in IMG/M
3300030630\|Ga0210282_10321942	Not Available	553	Open in IMG/M
3300030713\|Ga0307922_111577	Not Available	502	Open in IMG/M
3300030760\|Ga0265762_1096251	All Organisms → cellular organisms → Bacteria → Proteobacteria	651	Open in IMG/M
3300030760\|Ga0265762_1173347	Not Available	527	Open in IMG/M
3300030763\|Ga0265763_1025535	Not Available	646	Open in IMG/M
3300030812\|Ga0265734_106665	Not Available	516	Open in IMG/M
3300030812\|Ga0265734_107231	Not Available	502	Open in IMG/M
3300030814\|Ga0265741_107629	Not Available	726	Open in IMG/M
3300030831\|Ga0308152_115547	Not Available	511	Open in IMG/M
3300030846\|Ga0075403_10062485	Not Available	512	Open in IMG/M
3300030853\|Ga0075372_10071018	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	502	Open in IMG/M
3300030885\|Ga0265743_109074	Not Available	667	Open in IMG/M
3300030889\|Ga0265761_104121	Not Available	732	Open in IMG/M
3300030889\|Ga0265761_112972	Not Available	500	Open in IMG/M
3300030913\|Ga0265759_111574	Not Available	509	Open in IMG/M
3300030937\|Ga0138302_1272387	Not Available	506	Open in IMG/M
3300030940\|Ga0265740_1049742	Not Available	514	Open in IMG/M
3300030941\|Ga0265737_114319	Not Available	521	Open in IMG/M
3300030941\|Ga0265737_114329	Not Available	521	Open in IMG/M
3300030970\|Ga0075381_11537052	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	552	Open in IMG/M
3300030976\|Ga0265739_105907	Not Available	541	Open in IMG/M
3300030997\|Ga0073997_10026280	Not Available	534	Open in IMG/M
3300031017\|Ga0265744_116304	Not Available	503	Open in IMG/M
3300031058\|Ga0308189_10555403	Not Available	501	Open in IMG/M
3300031128\|Ga0170823_12326630	Not Available	501	Open in IMG/M
3300031521\|Ga0311364_12397117	Not Available	515	Open in IMG/M
3300031590\|Ga0307483_1021187	Not Available	638	Open in IMG/M
3300031614\|Ga0310103_128837	Not Available	674	Open in IMG/M
3300031870\|Ga0316029_111563	Not Available	501	Open in IMG/M
3300031871\|Ga0316036_119504	Not Available	504	Open in IMG/M
3300031955\|Ga0316035_123036	Not Available	520	Open in IMG/M
3300032072\|Ga0326631_118191	Not Available	513	Open in IMG/M
3300032562\|Ga0316226_1228133	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	756	Open in IMG/M
3300034282\|Ga0370492_0007636	All Organisms → cellular organisms → Bacteria	4391	Open in IMG/M
3300034644\|Ga0370548_101019	Not Available	584	Open in IMG/M
3300034653\|Ga0316599_227188	Not Available	501	Open in IMG/M
3300034661\|Ga0314782_152592	Not Available	567	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.26%
Host-Associated	Host-Associated	0.74%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.22%
Aquatic	Environmental → Aquatic	17.04%
Plants	Host-Associated → Plants	0.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.74%
Freshwater	Environmental → Aquatic → Freshwater	16.30%
Peat	Environmental → Terrestrial → Peat	1.48%
Marine	Environmental → Aquatic → Marine	0.74%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	71.11%
Sediment	Environmental → Aquatic → Freshwater → Sediment	5.93%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.19%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.19%
Lake	Environmental → Aquatic → Freshwater → Lake	3.70%
Loam	Environmental → Terrestrial → Soil → Loam	3.70%
Lentic	Environmental → Aquatic → Freshwater → Lentic	1.48%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.48%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.74%
Clay	Environmental → Terrestrial → Soil → Clay	0.74%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	43.70%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	25.93%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	5.93%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	3.70%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.70%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.70%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.70%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.48%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.48%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.48%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	0.74%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	0.74%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.74%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.74%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.74%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	29.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	23.70%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	7.41%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	4.44%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.70%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.70%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	2.22%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	2.22%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	2.96%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.96%
Wetland	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Wetland	1.48%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.48%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.48%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.48%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	0.74%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.74%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	0.74%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	0.74%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.74%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.74%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.74%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.74%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.74%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.74%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.74%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.74%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.74%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001448	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site A1 Bulk Metatranscriptome	Environmental	Open in IMG/M
3300002647	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF118 (Metagenome Metatranscriptome, Counting Only)	Environmental	Open in IMG/M
3300002671	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF130 (Metagenome Metatranscriptome, Counting Only)	Environmental	Open in IMG/M
3300004104	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF218 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005644	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate RNA 2013_053 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006426	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate RNA 2013_054 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006861	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300007526	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaT_CSR_2012 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009579	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_9_15_C (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009661	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-062	Environmental	Open in IMG/M
3300010856	Boreal forest soil eukaryotic communities from Alaska, USA - W4-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010858	Boreal forest soil eukaryotic communities from Alaska, USA - C3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010866	Boreal forest soil eukaryotic communities from Alaska, USA - C1-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011028	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 64 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011038	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 28 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011040	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 79 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011045	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 66 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011057	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 25 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011066	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 3 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011086	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 49 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011089	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 58 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011109	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 18 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011340	Combined Assembly of Wetland Metatranscriptomes	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012400	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012409	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012768	Freshwater microbial communities from Lake Montjoie, Canada - M_130710_M_mt (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012770	Freshwater microbial communities from Lake Simoncouche, Canada - S_140625_E_mt (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012778	Freshwater microbial communities from Lake Croche, Canada - C_130208_E_mt (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300013295	northern Canada Lakes metatranscriptome co-assembly	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016698	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016700	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019155	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLI1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019164	Soil microbial communities from Bohemian Forest, Czech Republic ? CSI3 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019167	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLU1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019170	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLI3 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019174	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLA3 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019178	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019182	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZE1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019240	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019249	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019270	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021128	Freshwater microbial communities from Trout Bog Lake, WI - 20AUG2007 epilimnion	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021286	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16RNAfungal (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021315	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_2_06_16RNAfungal (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021853	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Oregon, United States ? S.189 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021856	Metatranscriptome of freshwater microbial communities from post-fracked creek in Pennsylvania, United States - LL:C (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021857	Metatranscriptome of freshwater microbial communities from pre-fracked creek in Pennsylvania, United States - WE:C (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021858	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2015 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021967	Metatranscriptome of freshwater microbial communities from post-fracked creek in Pennsylvania, United States - AB:C (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022500	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-26-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022503	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-2-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022512	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022530	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022714	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022715	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022717	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300023533	Metatranscriptome of spruce litter microbial communities from Bohemian Forest, Czech Republic - CLE5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300023551	Metatranscriptome of soil microbial communities from Bohemian Forest, Czech Republic ? CSA4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300023669	Metatranscriptome of spruce litter microbial communities from Bohemian Forest, Czech Republic - CLA5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300023673	Metatranscriptome of spruce litter microbial communities from Bohemian Forest, Czech Republic - CLU4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300023684	Metatranscriptome of spruce roots microbial communities from Bohemian Forest, Czech Republic - CRE2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025634	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-2 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029701	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030531	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO143-VCO038SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030535	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO749-VDE026SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030539	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO151-VCO111SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030545	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO142-VCO033SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030572	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO137-ANR103SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030581	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO142-VCO031SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030594	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO141-VCO089SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030597	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO747-VDE046SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030602	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO133-ANR018SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030630	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO151-VCO115SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030713	Metatranscriptome of soil microbial communities from Risofladan, Vaasa, Finland - TR-1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030760	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030761	Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLI4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030763	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030812	Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLE6 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030814	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSI2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030831	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_141 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030846	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB5 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030853	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA8 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030885	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSI5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030889	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030913	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSA6 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030937	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A4_MS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300030940	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030941	Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLA4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030970	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OB1 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030976	Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLA6 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030997	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-3B (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031017	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSI6 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031521	III_Fen_E2 coassembly	Environmental	Open in IMG/M
3300031590	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031614	Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRI4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031870	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLI1 metaT (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300031871	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLE2 metaT (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031955	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLE1 metaT (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300032072	Soil microbial communities from Bohemian Forest, Czech Republic ? CSI2 metaT (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300032562	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18017	Environmental	Open in IMG/M
3300034282	Peat soil microbial communities from wetlands in Alaska, United States - Eight_mile_03D_16	Environmental	Open in IMG/M
3300034644	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_123 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034653	Metatranscriptome of peat soil microbial communities from wetland fen in Alaska, United States - Frozen_pond_03R_16 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034661	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI20219J14954_10138071	3300001448	Wetland	GAFAQNHGSRLFTLKLLFIHSPAVSFLTSPALGSFSRGLPSLRGLPGADSPFVPPFGVFLLAVPTF*
Ga0005469J37257_1001181	3300002647	Forest Soil	RLFTFRLHFHHSPAVSFLTSPALGSFSRGLPSLRDLPGADALFVPPFGVFLLAVSTFYF*
Ga0005481J37269_1021991	3300002671	Forest Soil	DSAFARRHGSRLFTLKLLFFHSPAVSFLTSPTPGSFSRGLPSLRGLPDPDSRFVPPFGVFLLADPTFYF*
Ga0058891_10199711	3300004104	Forest Soil	GSRLFTFRLHFHHSPAVSFLTSPALGSFSRGLPSLRDLPGADALFVPPFGVFLLAVSTFYF*
Ga0075036_10452301	3300005644	Permafrost Soil	ARDHGSRLFTLKLHFIHSPAVSFLTSPALGSSSRGLPSLRGLPGADAHFVPPFGVFRLAVPTFLFLLPPESSVRADTQ*
Ga0075037_11552442	3300006426	Permafrost Soil	FDSAFAPCHGSRLFTLKLLFNHSPAVSFLTSPTLGSFSRGLPSLRGLPGANAHFVPPFGVFRLADHADA*
Ga0063777_10183182	3300006861	Peatlands Soil	LFTLRLLFIHSPAVSFLTSPALGSFSRGLPSLRDLPGSDAHFVPPFGVFHLAVPTFYF*
Ga0075022_10793192	3300007526	Watersheds	FDSAFASCHGSRLFTLRLLFNHSPAVSFLTSPALGSFSRGLPSLRALPGANALFVPPFGVFRLADLRFVA*
Ga0115599_11729421	3300009579	Wetland	LALVGHRFWRCVGQSHGSRLLTLRLLFNHSPAVSFLTSPMLGSFSRGLPSLRGLPGANALFVAPFGVFRLAVSTFYF*
Ga0105858_11991191	3300009661	Permafrost Soil	SPAVFFSTSPAFGSFSHGLPSLRDLPGADAHFVPPFSVFRLAVPIFYF*
Ga0126358_11694591	3300010856	Boreal Forest Soil	RLFTLRLLYIYSPAVPFLTSPGFGSFSRGLPSLRGLPGSNAHFVPPFGVFRLAVPLFILNPPESFVRADTQ*
Ga0126345_11860392	3300010858	Boreal Forest Soil	HGSRLFTLRLLFNHSPAVSFLTSPTLGSFSRGLPSLRGLPDANALFVPPFGVFRLAVSTFWF*
Ga0126344_12592302	3300010866	Boreal Forest Soil	AFARDHGSRLFTLKLHFIHSPAVSFLTSPALGSSSRGLPSLRGLPGADSHFVPPFGVFRLAVPTFLFLLPPESSVRADTQ*
Ga0138577_1103861	3300011028	Peatlands Soil	RLFTLKLPYLYSPAVSFLISPAPGSYPRSLPSRRVLPDPRAPFVRLSTFLFLAGSTFYF*
Ga0138547_1043071	3300011038	Peatlands Soil	RLFTLKLLFFHNPAVPFLTSPTLGSFSRGLPSLRGLPGPDSRFVPPFGVFLSAGSTFYF*
Ga0138587_1055781	3300011040	Peatlands Soil	LFTLKLLFFHSPAVSFLTSPTPGSFSRDLPSLRGLPGPDSRFVPPFGVFLSAGPTFYF*
Ga0138598_1255162	3300011045	Peatlands Soil	SRLFTLRLRYIYSPAVPFLKSPGFGSFSRGLPSLRGLPGSNAHFVPPFGVFRLAVPLFILNPPESFVRADTQ*
Ga0138544_11048601	3300011057	Peatlands Soil	RLFTLRLLFIHSPAVSFLTSPALGSFSRGLPSLRDLPGSDAHFVPPFGVFHLAVPTFYF*
Ga0138524_11049581	3300011066	Peatlands Soil	RLFTLKLLFFHSPAVSFLTSPTPGSFSRGLPSLRGLPGPDSRFVPPFGVFLLAGSTYYY*
Ga0138564_12321301	3300011086	Peatlands Soil	GSRLFTLRLLFIHSPAVSFLTSPMLGSFSRGLPSLRVLPGANALFVPPFGVFLLAVPTFYF*
Ga0138573_10671231	3300011089	Peatlands Soil	VFDSAFARRHGSRLFTLKLLFFHSPAVSFLTSPTPGSFSRDLPSLRGLPGPDSRFVPPFGVFLSAGPTFYF*
Ga0138539_10514281	3300011109	Peatlands Soil	ARRHGSRLFTLKLLFFHSPAVPLLTSPTPGSFSRGLPSLRGLPDPDSRFVPPFGVFLLAGSTFYF*
Ga0150983_114646982	3300011120	Forest Soil	LFTLRLLFNHSPAVSFLTSPALGSFSRGLPSLRDLPGANALFVPPFGVFRLADLRFVA*
Ga0150983_134578291	3300011120	Forest Soil	RRHGSRLFTLKLLFFHSPAVSFLTSPMPGSFSRGLPSLRGLPDPDSRFVPPFGVFLLAGPTFYF*
Ga0151652_109184002	3300011340	Wetland	DGAFAQNHGSRLFTLKLLFIHSPAVSFLTSPALGSFSRGLPSLRGLPGADSPFVPPFGVFLLAVPTF*
Ga0137399_102515391	3300012203	Vadose Zone Soil	TLRLLFAHSPAVPFLTSPMLGIFSRGLPSLHVLPGADAHFVPPFGVFRLAASIFYF*
Ga0134048_13841741	3300012400	Grasslands Soil	LFTLKLLFFHSPAVSFLTSPTPGSFSRGLPSLRGLPGPDSRFVPPFGVFLLADPTFYF*
Ga0134045_11317002	3300012409	Grasslands Soil	RLFTLKLLFFHSPAVSFLTSPTPGSFSRGLPSLRGLPGPDSRFVPPFGVFLLADPTFYF*
Ga0138276_11807841	3300012768	Freshwater Lake	RLFTLRLLFNHSPAVSFLTSPTLGSFSRGLPSLRGLPGANALFVPPFGVFRLAVSTFYF*
Ga0138291_11558411	3300012770	Freshwater Lake	GSRLFTLRLLFIHSPAVSFLTSPALGSFSRGLPSLRVLPGANDLFVPPFGVFRLAVSTFYF*
Ga0138269_12829651	3300012778	Freshwater Lake	LFTLKLLFSHSPAVSFLTSPMLGSFSRDLPSLRDLPGANAHFIPPFGVFLLAVSTFYF*
Ga0138269_13916582	3300012778	Freshwater Lake	CFHSAFARRHGSRLFTLKLLFFHSPAVSFLTSPTLGSFSRRLPSLRGLPGANARFVPPFGVFLSAGSTFYF*
Ga0170791_110389541	3300013295	Freshwater	LFTLRLRFSHSPAVSFLTSPTLGSFSRGLPGRRVLPGANAHFVPPFGVFLLAVSTFYF*
Ga0182021_136082731	3300014502	Fen	LRLLFIHSPAVSFLTSPALGSFSRGLPSQRVLPGANALFVPPFGVFRLAVPTFYF*
Ga0182030_100884941	3300014838	Bog	AAFDGAFARCHGSRLFTFRLPFHHSPAVPFLTSPALGSFSHSLPSLRDLPGADALFVPPFGVFL*
Ga0181503_10893842	3300016698	Peatland	RLFTRKLPYFCSPAVSFLISPAPGSFSRGLPSHRELPDPRVPFVRFSTFLFLAGSTIYF
Ga0181513_11727951	3300016700	Peatland	GSATAFDGAFAQGHGSRLFTLKLHFIHSPAVSFLTSPALGSSSRGLPSLVVFPVRMLILSRLSASFIWRPNFLFLNPPESSVRADTQ
Ga0181505_111823512	3300016750	Peatland	AFAQYHGSRLFTLRLLYIYSPAVPFLTSPGFGSFSRGLPSHRGLPGSNAHFVPPFGVFRLAVPLFILNPPESFVRADTQ
Ga0184568_1027712	3300019155	Soil	HGSRLFTLKLLFFHSPAVSFLTSPTPGSFSRGLPSLRGLPGPDSRFVPPFGVFLLAGSTFYF
Ga0184582_1067992	3300019164	Soil	GSRLFTLRLLFHHSPAVSFLTSPMLGSFSRGLPSLRDLPGANAHFVPTFGVFRLADLRFD
Ga0184582_1152912	3300019164	Soil	GSRLFTLRLLFHHSPAVSFLTSPMLGSFSRGLPSLRDLPGADALFVPAFAVFLLPVSTFY
Ga0184571_1024542	3300019167	Soil	SRLFTLKLPFIHSPAVSFLTSPALGSFSRGLPGLRGLPGLDSHFVPPFSVFLLADHTF
Ga0184570_1078672	3300019170	Soil	RLFTLKLLFFHSPAVSFLTSPTPGSFSRGLPSLRGLPGPDSRFVPPFGVFLLAGSTFYF
Ga0184579_1023661	3300019174	Soil	FTLKLLFFHSPAVSFLTSPALGSFSRGLPSLRDLPGSNAHFVPPFGVFRLADLRFDA
Ga0184579_1199092	3300019174	Soil	RLFTLKLHFIHSPAVSFLTSPALGSSSRGLPSRRGLPGKDAHFVPPFGVFRLAVPTFLFLLPPESSVRADTQ
Ga0184583_1091771	3300019178	Soil	RLFTLRLPFHHSPAVSFLTSPTLGSFSRGLPSLRDLPGADALFVPAFAVFLLPVSTFYF
Ga0184598_1266632	3300019182	Soil	LFTLKLLFFHSPAVSFLTSPTLGSLSRGLPSLRGLPGANARFVPPFGVFLLANSTFYF
Ga0181510_14423781	3300019240	Peatland	HGSRLFTLRLLFNHSPAVSFLTSPALGSFSRGLPSLRVLPGSDAHFVAPFGVFHLAVSTFYF
Ga0184648_14943631	3300019249	Groundwater Sediment	FTLKLLFIHSPAVSFLTSPALGSFSRGLPSLRGLPGSNAPFVPPFGVFLLAVPTFLFLNPPESSVRADTQ
Ga0181512_14502361	3300019270	Peatland	TLKLPFTHSPAVLFLTSPGFGSFSRGLPGLRDLPGLDSHFVPPFGVFLLADRAFYAQPPESSIRADTQ
Ga0214176_10220711	3300021128	Freshwater	LFTLRLLFHHSPAVSFLTSPALGSFSRGLPSLRDLPGANALFVPPFSVFLLAVPTFYF
Ga0210388_115582431	3300021181	Soil	FFHSPAVSFLTSPAFGSFSRGLPGLRGLPGLDSHFVPPFSVFLLADRAFYCAAARVIHPC
Ga0179583_10615121	3300021286	Vadose Zone Soil	LLFFHSPAVPFLTSPMLGSFSRGLPSLHALPDPDSRFVPPFGVFLLAGSTFYF
Ga0179958_11519012	3300021315	Vadose Zone Soil	LFTLRLLFIHSPAVSFLTSPMLGSFSRGLPSLRVLPGANALFVPPFGDFLLAVPTFYF
Ga0179958_12071842	3300021315	Vadose Zone Soil	LFTLRLLFNHSPAVSFLTSPTLGSFSRGLPSLRALPGANALFVPPFGVFLLAVPIFYF
Ga0210387_102580303	3300021405	Soil	HSPAVSFLTSPALGSFSRGLPGLRVLPGLDSHFVPPFGVFLLADHAFYTQPPESSIRADT
Ga0210323_10335631	3300021853	Estuarine	RLFTLRLLFNHSPAVSFLTSPTLGSFSRGLPSLRGLPGANAHFVPPFGVFRLADLRFDA
Ga0213850_10234562	3300021856	Watersheds	LFTLKLLFFHSPAVSFLTSPTPGSFSRGLPSLRVLPDPDSRFVPPFGVFLLADSTIYF
Ga0213849_10253821	3300021857	Watersheds	GSRLFTLRLLFHHSPAVSFLTSPALGSFSRGLPSRRVLPGADALFVPLFGVFLLAAPTFY
Ga0213852_11035882	3300021858	Watersheds	GSRLFTLRLLFIHSPAVSFLTSPALGSFSRGLPSLRDLPGADALFVPPFGVFLLAVPTFY
Ga0213848_10903341	3300021967	Watersheds	LFTLRLHFIHSPAVSFLTSPALGSSSLGLPGRRGLPGADSHFVPPFGVFRLAVPAFIPNPPESSVRADTQ
Ga0213848_12390711	3300021967	Watersheds	GTATAFDGAFARSHGSRLFTRKLLSFCSPAVSFLISPTPGSFSRSLPSQRELPDPRVPFVRFSTFLFMAGSTF
Ga0242643_1150591	3300022500	Soil	GSRLFTLRLHFHHSPAVSFLTSPALGSFSRGLPSLRGLPGANAHFVPLFSVFRLADLRFF
Ga0242650_10270811	3300022503	Soil	RLFTLKLPFIHSPAVSFLTSPALGSFSRGLPGLRGLPGLDSHFVPPFSVFLLADHTF
Ga0242676_10538682	3300022512	Soil	HGSRLFTLKLLFFHSPAVSLLTSPTPGSFSRGLPSLRGLPGPDSRFDPPFGVFLLGDPTFYF
Ga0242676_10550622	3300022512	Soil	RLFTFRLLFHHSPAVLFLTSPALGSFSRGLPSLRDLPGANALFVPPFGVFLLAVSTFYF
Ga0242658_12500922	3300022530	Soil	LFTFRLLFHHSPAVSFLTSPALGSFSRGLPSLRDLPGVDALFVPAFAVFLLAVSTFYFLNPPESSVRADAQ
Ga0242655_101677831	3300022532	Soil	FTLKLLFFHSPAVSFLTSPTPGSFSHGLPSLRGLPGPDSRFVPPFGVFLLADSTFYF
Ga0242671_10695111	3300022714	Soil	ARRHGSRLFTLKLLFFHSPAVSFLTSPTPGSFSHGLPSLRGLPGPDSRFVQPFGVFLLADSTFYF
Ga0242671_11329941	3300022714	Soil	GSAFARGHGSRLFTLKLPFIHSPAVSFLTSPALGSFSRGLPGLRVLPGLDSHFVPPFGVFLLADHAFYTQPPESSIRADTQ
Ga0242678_10764462	3300022715	Soil	AFARGHGSRLFTLKLLFIHSPAVSFLTSPALGSFSRGLPGLRGLPGVDAHFVTPFGGFLLADQTFFERPPESSIRADTQ
Ga0242661_10371051	3300022717	Soil	MLLYPITFRLLFHHSPAVLFLTSPALGSFSRGLPSLRDLPGANALFVPPFGVFLLAVSTFYF
Ga0242657_12377382	3300022722	Soil	FTLKLLFFHSPAVSFLTSPTPGSFSRGLPSLRGLPDPDSRFVPPFGVFLLADPTFYF
Ga0247537_1033602	3300023533	Soil	RLFTLRLLFHHSPAVSFLTSPMLGSFSRGLPSLRDLPGADALFVPAFAVFLLPVSTFYF
Ga0247546_1053962	3300023551	Soil	VFDSAFARRHGSRLFTLKLLFFHSPAVSFLTSPTPGSFSRGLPSLRGLPGPDSRFVPPFGVFLLAGSTFYF
Ga0247539_1031662	3300023669	Soil	GHGSRLFTLKLLFIYSPAVSFLTSPALGSLSRGLPGLRGLPGVDAHFVTPFGGFLLADRTFFARPPESSIRADTQ
Ga0247534_1011092	3300023673	Soil	LLFFHSPAVSFLTSPMLGSFSRGLPSLRDLPGADALFVPAFAVFLLPVSTFYF
Ga0247523_1176052	3300023684	Soil	QCHGSRLFTLRLPFHHSPAVSFLTSPTLGSFSRGLPSLRDLPGADALFVPAFAVFLSAVSIFYF
Ga0208589_10362582	3300025634	Arctic Peat Soil	ARRHGSRLFTLKLLFFHSPAVSFLTSPTPGSFSRGLPSLRGLPDPDSHFVPPFGVFLLADPTFYFRIPPESSVRADAQ
Ga0265338_102092531	3300028800	Rhizosphere	THSPAVSFLTSPMLGSFSRGLPSRRDLPGSDAHFVAPFGVFHLAVSTFYFEPARVIRPC
Ga0222749_108163072	3300029636	Soil	GSRLFTFRLHFHHSPAVSFLTSPALGSFSRGLPSLRDLPGVDALFVPAFAVFLLAVSTFYFLNPPESSVRADAQ
Ga0222748_11379381	3300029701	Soil	FTLRLPFIHSPAVSFLTSPAFGSFSRGLPSLRGLPGAAAHYVAPFGVFHLAVPTFYF
Ga0210274_14707401	3300030531	Soil	HGSRLFTLKLLFIHSPAVSFLTSPVLGSFSRGLPSLRGLPGLDSHFVTPFGVFLLADRTFFAQPPESSIRADTQ
Ga0210274_15273691	3300030531	Soil	AAGGSAFAQYHGSRLFTLRLLYIYSPAVPFLTSPGFGSFSRGLPSLRGLPGSNAHFVPPFGVFRLAVPLFILNPPESFVRADTQ
Ga0210285_14033001	3300030535	Soil	HGSRLFTLKLLFFHSPAVSFLTSPTPGSFSRDLPSLRGLPGPDSRFVPPFGVFLLAIPIFYF
Ga0210285_14405952	3300030535	Soil	LLFIHSPAVSFLTSPALGSFSRGLPGLRVLPGVDAHFVTPFGGFLLADRTFFARPPESSIRADTQ
Ga0210281_10972761	3300030539	Soil	FDGAFARGHGSRLFTLKLLFIYSPAVSFLTSPAIGSHSRGLPGLRGLPGVDAHFVTPFGGFLLADHTFFAQPPESSIRADTQ
Ga0210271_100022811	3300030545	Soil	RLFTLRLLFIHSPAVSFLTSPTLGSFSRGLPSLRALPGANAHFVAPFGVFLLAVSTFYF
Ga0210258_108560902	3300030572	Soil	AFARRHGSRLFTLKLLFFHSPAVSFLTSPTPGSFSRGLPSRRVLPDAITLFVRLSAFLILASSTFYF
Ga0210270_11453172	3300030581	Soil	FDGAFARGHGSRLFTLKLLFIYSPAVSFLTSPAIGSHSRGLPGLRGLPGVDAHFVTPFGGFLLADHTFFARPPESSIRADTQ
Ga0210280_11889731	3300030594	Soil	GSRLFTLKLLFIHSPAVSFLTSPALGSFSRGLPSLRGLPGLDSHFVTPFGVFLLADRTFFAQPPESSIRADTQ
Ga0210286_13047891	3300030597	Soil	FHFFSVLFTLKLLFFHSPAVSFLTSPTLGSFSSGLPSLRDLPGANAHFVPPFGVFRLAVSTFYF
Ga0210254_103274961	3300030602	Soil	GSRLFTLRLLFIHSPAVSFLTSPTLGSFSRGLPSLRALPGANAHFVAPFGVFLLAVSTFY
Ga0210282_103219421	3300030630	Soil	CHGSRLFTLRLLFIHSPAVSFLTSPTLGSFSRGLPSLRGLPGANAHFVTPFGVFRLADHADA
Ga0307922_1115772	3300030713	Soil	FTLRLHFHHSPAVPFLTSPTLGSFSRGLPSLRVLPGADAHFVPPFGVFRLADLRFDA
Ga0265762_10962512	3300030760	Soil	CHGSRLFTLKLLFFHSPAVSFLTSPALGSFSRGLPSLRDLPGANAHFVPPFGVFRLADLRFDA
Ga0265762_11733472	3300030760	Soil	AFARRHGSRLFTLKLLFFHSPAVSFLTSPTPGSFSRGLPSLRGLPGPDSRFVPPFGVFLLAVPTFYF
Ga0265722_1078992	3300030761	Soil	GSRLFTLKLLFIYSPAVSFLTSPALGSLSRGLPGLRGLPGVDAHFVTPFGGFLLADRTFFARPPESSIRADTQ
Ga0265763_10255352	3300030763	Soil	LLFHHSPAVSFLTSPMLGSFSRGLPSLRDLPGADALFVPAFAVFLLPVSTFYF
Ga0265763_10573391	3300030763	Soil	RLFTLKLLFIYSPAVSFLTSPAIGSHSRGLPGLRGLPGVDAHFVTPFGGFLLADHTFFAQPPESSIRADTQ
Ga0265734_1066652	3300030812	Soil	CHGSRLFTLRLLFHHSPAVSFLTSPMLGSFSRGLPSLRDLPGADALFVPAFAVFLLPVSTFYF
Ga0265734_1072311	3300030812	Soil	LFTLKLLFIHSPAVSFLTSPTLGSFSRGLPSLRDLPGANAHFVPPFGVFLLAGPVFA
Ga0265741_1076292	3300030814	Soil	LLFNHSPAVSFLTSPMLGSFSRGLPSLRDLPGADALFVPAFAVFLLPVSTFYF
Ga0308152_1155471	3300030831	Soil	GLFTLRLPFIHSPAVSFLTSPMLGSFSRGLPSLRDLPGANALFVPPFGVFLLAVPTFYF
Ga0075403_100624852	3300030846	Soil	SATAFDGAFARGHGSRLFTLKLHFIHSPAVSFLTSPALGSSSRGLPSLRGLPGADAHFVPPFGVFHLAVPTFILNPPESSVRADTQ
Ga0075372_100710182	3300030853	Soil	HGSRLFTFRLHFHHSPAVSFLTSPALGSFSRGLPSLRDLPSADALFVPPFGVFLLAVSTFYF
Ga0265743_1090741	3300030885	Soil	RLFTHRLLFSHSPAVSFLTPPMPGSFSRGLPSRRVLPGANAHFVPPFGVFFGDPVFA
Ga0265761_1041212	3300030889	Soil	LLFIHSPAVSFLTSPTLGSFSRGLPSLRDLPGADALFVPAFAVFLLPVSTFYF
Ga0265761_1129721	3300030889	Soil	RLFTLKLPFTHSPAVLFLTSPGFGSFSRGLPSLRGLPGLDSHFVPPFSVFLLADRAFYAQPPESSIRADTQ
Ga0265759_1115742	3300030913	Soil	RLFTLRLLFHHSPAVSFLTSPMLGSFSRGLPSQRVLPGANAHFVPPFGVFRLADLRFDA
Ga0265759_1119611	3300030913	Soil	RLFTLKLLFIHSPAVSFLTSPALGSFSRGLPGLRGLPGVDAHFVTPFGGFLLADQTFFERPPESSIRADTQ
Ga0138302_12723871	3300030937	Soil	RCHGSRLFTFRLHFHHSPAVSFLTSPALGSFSRGLPSLRDLPGAYALFVPAFAVFLLAVSTFYF
Ga0265740_10497421	3300030940	Soil	HGSRLFTLKLLFFHSPAVSFLTSPTPGSFSRGLPSLRGLPDPESRFVPPFGVFLLADPTFYF
Ga0265737_1143191	3300030941	Soil	RLFTLKLHFIHSPAVSFLTSPALGSSSRGLPGLRGLPGADAHFVPPFGVFRLAVPTFLFLLPPESSVRADTQ
Ga0265737_1143291	3300030941	Soil	CHGSRLFTLRLLFNHSPAVSFLTSPALGSFSRGLPSLRDLPGANAHFVPPFGVFRLADLRFDA
Ga0075381_115370521	3300030970	Soil	HSPAVSFLTSPALGSFSRGLPSLRVLPGANALFVPPFGVFRLAVPTFYF
Ga0265739_1059072	3300030976	Soil	ATAFDGAFARGHGSRLFTLKLLFIHSPAVSFLTSPALGSFSRGLPGLRGLPGVDAHFVTPFGGFLLADHTFFARPPESSIRADTQ
Ga0073997_100262801	3300030997	Soil	VFDSAFARRHGSRLFTLKLLFFHSPAVSFLTSPTLGSFSRGLPSLRGLPGPDSRFVPPFGVFLLADSIFYF
Ga0265744_1163042	3300031017	Soil	GLFTLKLLFIYSPAVSFLTSPAIGSHSRGLPGLRGLPGVDAHFVTPFGDFLLADHTFFAQPPESSIRADTQ
Ga0308189_105554031	3300031058	Soil	FTLRLHFIYSPAVSFLTSPALGSSSRGLPSLRGLPGADSHFVPPFGVFLLAVPTFLFLNPPESSVRADTQ
Ga0170823_123266301	3300031128	Forest Soil	FTFRLLFHHSPAVSFLTSPALGSFSRGLPSLRGLPGENAHFVPPFSVFRLADLRFFA
Ga0311364_118842021	3300031521	Fen	SRLFTLKLLFIHSPAVSFLTSPALGSFSRGLPSLRGLPGSNAPFVPPFGVFLLAVPTFLFLNPPESSVRADTQ
Ga0311364_123971171	3300031521	Fen	SAFAPCHGSRLFTLRLLFNHSPAVLFLTSPTLGRFSRGLPSLRVLPGANALFVPPFGVFLLADRRFDA
Ga0307483_10211871	3300031590	Hardwood Forest Soil	LHFHHSPAVSFLTSPTLGSFSRGLPSLRDLPGVDALFVPAFAVFLLAVSTFYFLNPPESSVRADAQ
Ga0310103_1288372	3300031614	Soil	LLFFHSPAVSFLTSPALGSFSRGLPSLRDLPGANAHFVPPFGVFRLADLRFDA
Ga0316029_1115632	3300031870	Soil	GLFTLKLLFIYSPAVSFLTSPALGSLSRGLPGLRGLPGVDAHFVTPFGGFLLADRTFFARPPESSIRADTQ
Ga0316036_1195041	3300031871	Soil	SRLFTLKLPFTHSPAVLFLTSPGFGSFSRGLPSLRGLPGLDSHFVPPFSVFLLADRAFYAQPPESSIRADTQ
Ga0306923_118985362	3300031910	Soil	HSPAMSFLTSPALGSFSRGLPSLHDLPGADAHFVSPFGVFRLADPVFVARPPESSVRADA
Ga0316035_1230362	3300031955	Soil	AQCHGSRLFTLRLLFHHSPAVSFLTSPMLGSFSRGLPSLRDLPGADALFVPAFAVFLLPVSTFYF
Ga0326631_1181911	3300032072	Soil	HGSRLFTLRLPFHHSPAVSFLTSPTLGSFSRGLPSLRDLPGADALFVPAFAVFLSAVSIFYF
Ga0316226_12281331	3300032562	Freshwater	AFARCHGSRLFTLRLLFHHSPAVSFLTSPALGSFSRGLPSLRDLPGANALFVPPFSVFLLAVPTFYF
Ga0370492_0007636_412_573	3300034282	Untreated Peat Soil	LLFIHSPAVSFLTSPVPGSFSRGLPSQRGLPGADAHFVPPFGVFLLADPAFFA
Ga0370548_101019_330_491	3300034644	Soil	LLFIHSPAVSFLTSPALGSFSRGLPSLRGLPGADAHFVAPFGVFHLAVPTFYF
Ga0316599_227188_291_452	3300034653	Untreated Peat Soil	LLFNHSPAVSFLTSPMLGSFSRGLPSLRVLPGANALFVPPFGVFLLADLRFDA
Ga0314782_152592_317_478	3300034661	Soil	LLFHHSPAVPFLTSPTLGSFSRGLPSLRVLPGANALFVPPFGVFLLAVSTFYF

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.18
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.18
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F058155

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign