Metagenome / Metatranscriptome Family F058180

Basic Information
Family ID	F058180
Family Type	Metagenome / Metatranscriptome
Number of Sequences	135
Average Sequence Length	86 residues
Representative Sequence	MNAKNGDLGAGGDSEQVKEHLRAAKDAAASAARARAQQARDWASSQIDDLQQRVEAQPYKASAWALGAGFLAGILLMSLVRNSRR
Number of Associated Samples	101
Number of Associated Scaffolds	135

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	71.11 %
% of genes near scaffold ends (potentially truncated)	35.56 %
% of genes from short scaffolds (< 2000 bps)	82.96 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Most Common Taxonomy
Group	Bacteria (62.222 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (15.556 % of family members)
Environment Ontology (ENVO)	Unclassified (48.889 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (54.815 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 62.83% β-sheet: 0.00% Coil/Unstructured: 37.17%
Feature Viewer

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Pfam ID	Name	% Frequency in 135 Family Scaffolds
PF02781	G6PD_C	33.33
PF05201	GlutR_N	24.44
PF00202	Aminotran_3	2.22
PF00486	Trans_reg_C	1.48
PF00920	ILVD_EDD	1.48
PF14026	DUF4242	0.74
PF07730	HisKA_3	0.74
PF03544	TonB_C	0.74
PF02321	OEP	0.74
PF04127	DFP	0.74
PF04389	Peptidase_M28	0.74
PF00082	Peptidase_S8	0.74
PF03480	DctP	0.74
PF02518	HATPase_c	0.74

COG ID	Name	Functional Category	% Frequency in 135 Family Scaffolds
COG0364	Glucose-6-phosphate 1-dehydrogenase	Carbohydrate transport and metabolism [G]	33.33
COG0373	Glutamyl-tRNA reductase	Coenzyme transport and metabolism [H]	24.44
COG0129	Dihydroxyacid dehydratase/phosphogluconate dehydratase	Carbohydrate transport and metabolism [G]	2.96
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	1.48
COG0452	Phosphopantothenoylcysteine synthetase/decarboxylase CoaBC	Coenzyme transport and metabolism [H]	0.74
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.74
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	0.74
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.74
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.74
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	0.74

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	62.22 %
Unclassified	root	N/A	37.78 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	62.22 %
Unclassified	root	N/A	37.78 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	62.22 %
Unclassified	root	N/A	37.78 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	43.70 %
Unclassified	root	N/A	37.78 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.78 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.48 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.48 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.78 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.48 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.48 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.78 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	0.74 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.74 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.74 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.78 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	0.74 %
Promicromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Promicromonosporaceae	0.74 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.74 %
Ralstonia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Ralstonia	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.78 %
unclassified Pseudomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas	0.74 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	0.74 %
Xylanimonas	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Promicromonosporaceae → Xylanimonas	0.74 %
Ralstonia pickettii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Ralstonia → Ralstonia pickettii	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.78 %
Xylanimonas cellulosilytica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Promicromonosporaceae → Xylanimonas → Xylanimonas cellulosilytica	0.74 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → environmental samples	0.74 %
Pseudomonas sp. ATCC 13867	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. ATCC 13867	0.74 %
Ralstonia pickettii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Ralstonia → Ralstonia pickettii	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.78 %
uncultured Nocardioides sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → environmental samples → uncultured Nocardioides sp.	0.74 %
Xylanimonas cellulosilytica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Promicromonosporaceae → Xylanimonas → Xylanimonas cellulosilytica	0.74 %
Pseudomonas sp. ATCC 13867	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. ATCC 13867	0.74 %
Ralstonia pickettii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Ralstonia → Ralstonia pickettii	0.74 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459020\|G1P06HT01AEC54	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Ralstonia → Ralstonia pickettii	518	Open in IMG/M
3300002245\|JGIcombinedJ26739_100151477	All Organisms → cellular organisms → Bacteria	2191	Open in IMG/M
3300004091\|Ga0062387_101747991	All Organisms → cellular organisms → Bacteria → Proteobacteria	506	Open in IMG/M
3300004092\|Ga0062389_101283494	All Organisms → cellular organisms → Bacteria	917	Open in IMG/M
3300004801\|Ga0058860_10854490	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Promicromonosporaceae → Xylanimonas → Xylanimonas cellulosilytica	542	Open in IMG/M
3300005260\|Ga0074072_1034142	All Organisms → cellular organisms → Bacteria	1659	Open in IMG/M
3300005327\|Ga0070658_11052467	Not Available	708	Open in IMG/M
3300005331\|Ga0070670_100393964	All Organisms → cellular organisms → Bacteria → Proteobacteria	1222	Open in IMG/M
3300005332\|Ga0066388_100623936	All Organisms → cellular organisms → Bacteria → Proteobacteria	1697	Open in IMG/M
3300005335\|Ga0070666_10286002	All Organisms → cellular organisms → Bacteria → Proteobacteria	1172	Open in IMG/M
3300005335\|Ga0070666_10581173	All Organisms → cellular organisms → Bacteria	816	Open in IMG/M
3300005335\|Ga0070666_10854687	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300005337\|Ga0070682_101163153	All Organisms → cellular organisms → Bacteria → Proteobacteria	649	Open in IMG/M
3300005355\|Ga0070671_100397006	All Organisms → cellular organisms → Bacteria	1179	Open in IMG/M
3300005455\|Ga0070663_100234428	All Organisms → cellular organisms → Bacteria	1446	Open in IMG/M
3300005529\|Ga0070741_10012134	All Organisms → cellular organisms → Bacteria → Proteobacteria	15670	Open in IMG/M
3300005529\|Ga0070741_10356879	All Organisms → cellular organisms → Bacteria	1354	Open in IMG/M
3300005533\|Ga0070734_10217544	All Organisms → cellular organisms → Bacteria → Proteobacteria	1099	Open in IMG/M
3300005534\|Ga0070735_10247459	All Organisms → cellular organisms → Bacteria	1081	Open in IMG/M
3300005538\|Ga0070731_10565378	All Organisms → cellular organisms → Bacteria → Proteobacteria	757	Open in IMG/M
3300005539\|Ga0068853_101090040	Not Available	770	Open in IMG/M
3300005542\|Ga0070732_10208364	All Organisms → cellular organisms → Bacteria	1169	Open in IMG/M
3300005548\|Ga0070665_100053593	All Organisms → cellular organisms → Bacteria → Proteobacteria	4045	Open in IMG/M
3300005614\|Ga0068856_100155270	All Organisms → cellular organisms → Bacteria → Proteobacteria	2298	Open in IMG/M
3300005614\|Ga0068856_101060375	All Organisms → cellular organisms → Bacteria	828	Open in IMG/M
3300005616\|Ga0068852_102861939	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. ATCC 13867	500	Open in IMG/M
3300005841\|Ga0068863_100775373	All Organisms → cellular organisms → Bacteria	955	Open in IMG/M
3300005937\|Ga0081455_10575858	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	739	Open in IMG/M
3300006358\|Ga0068871_102363828	Not Available	507	Open in IMG/M
3300006638\|Ga0075522_10587856	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300006893\|Ga0073928_10166621	All Organisms → cellular organisms → Bacteria → Proteobacteria	1761	Open in IMG/M
3300009093\|Ga0105240_10098005	All Organisms → cellular organisms → Bacteria	3571	Open in IMG/M
3300009093\|Ga0105240_10128910	All Organisms → cellular organisms → Bacteria → Proteobacteria	3037	Open in IMG/M
3300009093\|Ga0105240_11753636	Not Available	647	Open in IMG/M
3300009098\|Ga0105245_11826166	Not Available	661	Open in IMG/M
3300009545\|Ga0105237_10966455	All Organisms → cellular organisms → Bacteria → Proteobacteria	859	Open in IMG/M
3300009545\|Ga0105237_11012421	All Organisms → cellular organisms → Bacteria → Proteobacteria	838	Open in IMG/M
3300009551\|Ga0105238_11345234	All Organisms → cellular organisms → Bacteria → Proteobacteria	741	Open in IMG/M
3300010375\|Ga0105239_10647188	Not Available	1207	Open in IMG/M
3300010397\|Ga0134124_11890906	Not Available	632	Open in IMG/M
3300010397\|Ga0134124_12139759	All Organisms → cellular organisms → Bacteria → Proteobacteria	598	Open in IMG/M
3300010876\|Ga0126361_10346651	Not Available	510	Open in IMG/M
3300010877\|Ga0126356_11155281	Not Available	548	Open in IMG/M
3300011120\|Ga0150983_16471456	Not Available	609	Open in IMG/M
3300012207\|Ga0137381_10458441	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → environmental samples → uncultured Nocardioides sp.	1112	Open in IMG/M
3300012212\|Ga0150985_104118863	All Organisms → cellular organisms → Bacteria → Proteobacteria	977	Open in IMG/M
3300012212\|Ga0150985_104744259	All Organisms → cellular organisms → Bacteria → Proteobacteria	512	Open in IMG/M
3300012212\|Ga0150985_106812531	Not Available	568	Open in IMG/M
3300012212\|Ga0150985_121082515	Not Available	586	Open in IMG/M
3300012212\|Ga0150985_121722709	Not Available	535	Open in IMG/M
3300012351\|Ga0137386_10276449	Not Available	1208	Open in IMG/M
3300012359\|Ga0137385_11411169	Not Available	560	Open in IMG/M
3300012469\|Ga0150984_103064516	All Organisms → cellular organisms → Bacteria → Proteobacteria	531	Open in IMG/M
3300012469\|Ga0150984_110016336	All Organisms → cellular organisms → Bacteria → Proteobacteria	1010	Open in IMG/M
3300012923\|Ga0137359_10568217	All Organisms → cellular organisms → Bacteria → Proteobacteria	997	Open in IMG/M
3300012923\|Ga0137359_10730102	All Organisms → cellular organisms → Bacteria → Proteobacteria	861	Open in IMG/M
3300012924\|Ga0137413_10001309	All Organisms → cellular organisms → Bacteria	9535	Open in IMG/M
3300012924\|Ga0137413_10131928	Not Available	1607	Open in IMG/M
3300012924\|Ga0137413_10154743	All Organisms → cellular organisms → Bacteria → Proteobacteria	1501	Open in IMG/M
3300012924\|Ga0137413_10812044	All Organisms → cellular organisms → Bacteria → Proteobacteria	719	Open in IMG/M
3300012924\|Ga0137413_11802713	Not Available	505	Open in IMG/M
3300012927\|Ga0137416_10001085	All Organisms → cellular organisms → Bacteria → Proteobacteria	13526	Open in IMG/M
3300012927\|Ga0137416_11162422	Not Available	694	Open in IMG/M
3300012929\|Ga0137404_10044785	All Organisms → cellular organisms → Bacteria	3359	Open in IMG/M
3300012930\|Ga0137407_11276936	Not Available	697	Open in IMG/M
3300013100\|Ga0157373_11368512	Not Available	537	Open in IMG/M
3300013296\|Ga0157374_11567000	Not Available	683	Open in IMG/M
3300013297\|Ga0157378_11704753	Not Available	677	Open in IMG/M
3300014168\|Ga0181534_10009392	All Organisms → cellular organisms → Bacteria → Proteobacteria	5246	Open in IMG/M
3300014501\|Ga0182024_11224918	Not Available	876	Open in IMG/M
3300014968\|Ga0157379_10172285	All Organisms → cellular organisms → Bacteria → Proteobacteria	1954	Open in IMG/M
3300014969\|Ga0157376_11568951	Not Available	692	Open in IMG/M
3300015264\|Ga0137403_10017248	All Organisms → cellular organisms → Bacteria	7793	Open in IMG/M
3300015264\|Ga0137403_10672501	All Organisms → cellular organisms → Bacteria → Proteobacteria	897	Open in IMG/M
3300019270\|Ga0181512_1627328	All Organisms → cellular organisms → Bacteria → Proteobacteria	1442	Open in IMG/M
3300021151\|Ga0179584_1436434	Not Available	599	Open in IMG/M
3300021168\|Ga0210406_10279849	All Organisms → cellular organisms → Bacteria → Proteobacteria	1362	Open in IMG/M
3300021168\|Ga0210406_10934526	Not Available	650	Open in IMG/M
3300021170\|Ga0210400_11518421	Not Available	531	Open in IMG/M
3300021377\|Ga0213874_10175796	Not Available	760	Open in IMG/M
3300021474\|Ga0210390_10310585	All Organisms → cellular organisms → Bacteria → Proteobacteria	1336	Open in IMG/M
3300022525\|Ga0242656_1085459	All Organisms → cellular organisms → Bacteria → Proteobacteria	598	Open in IMG/M
3300022878\|Ga0247761_1085696	Not Available	628	Open in IMG/M
3300022897\|Ga0247764_1070862	All Organisms → cellular organisms → Bacteria	1076	Open in IMG/M
3300022910\|Ga0247768_1002047	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	7237	Open in IMG/M
3300023265\|Ga0247780_1197339	Not Available	545	Open in IMG/M
3300023270\|Ga0247784_1092484	Not Available	766	Open in IMG/M
3300024330\|Ga0137417_1496600	All Organisms → cellular organisms → Bacteria	4114	Open in IMG/M
3300025903\|Ga0207680_10125117	Not Available	1687	Open in IMG/M
3300025904\|Ga0207647_10039541	All Organisms → cellular organisms → Bacteria	2974	Open in IMG/M
3300025909\|Ga0207705_10726119	All Organisms → cellular organisms → Bacteria → Proteobacteria	772	Open in IMG/M
3300025913\|Ga0207695_10416369	Not Available	1228	Open in IMG/M
3300025913\|Ga0207695_10928694	All Organisms → cellular organisms → Bacteria → Proteobacteria	750	Open in IMG/M
3300025913\|Ga0207695_11110035	Not Available	671	Open in IMG/M
3300025914\|Ga0207671_11044329	Not Available	643	Open in IMG/M
3300025914\|Ga0207671_11462731	Not Available	528	Open in IMG/M
3300025924\|Ga0207694_11472837	Not Available	575	Open in IMG/M
3300025927\|Ga0207687_11229973	Not Available	644	Open in IMG/M
3300025931\|Ga0207644_10122333	All Organisms → cellular organisms → Bacteria → Proteobacteria	1982	Open in IMG/M
3300025961\|Ga0207712_10716265	All Organisms → cellular organisms → Bacteria → Proteobacteria	874	Open in IMG/M
3300025986\|Ga0207658_11008877	All Organisms → cellular organisms → Bacteria → Proteobacteria	759	Open in IMG/M
3300027727\|Ga0209328_10133649	All Organisms → cellular organisms → Bacteria → Proteobacteria	756	Open in IMG/M
3300027738\|Ga0208989_10201105	Not Available	659	Open in IMG/M
3300027826\|Ga0209060_10256771	Not Available	800	Open in IMG/M
3300027842\|Ga0209580_10164583	All Organisms → cellular organisms → Bacteria → Proteobacteria	1094	Open in IMG/M
3300027869\|Ga0209579_10528591	Not Available	640	Open in IMG/M
3300027903\|Ga0209488_10241136	All Organisms → cellular organisms → Bacteria → Proteobacteria	1356	Open in IMG/M
3300027986\|Ga0209168_10200779	All Organisms → cellular organisms → Bacteria → Proteobacteria	998	Open in IMG/M
3300028379\|Ga0268266_10036367	All Organisms → cellular organisms → Bacteria → Proteobacteria	4191	Open in IMG/M
3300028380\|Ga0268265_10660952	Not Available	1005	Open in IMG/M
3300028380\|Ga0268265_12326662	Not Available	542	Open in IMG/M
3300028536\|Ga0137415_10000050	All Organisms → cellular organisms → Bacteria → Proteobacteria	84834	Open in IMG/M
3300028536\|Ga0137415_11393748	Not Available	522	Open in IMG/M
3300030521\|Ga0307511_10000035	All Organisms → cellular organisms → Bacteria → Proteobacteria	104063	Open in IMG/M
3300030521\|Ga0307511_10101599	All Organisms → cellular organisms → Bacteria → Proteobacteria	1884	Open in IMG/M
3300030521\|Ga0307511_10401722	Not Available	563	Open in IMG/M
3300031039\|Ga0102760_10675624	Not Available	599	Open in IMG/M
3300031231\|Ga0170824_101230852	Not Available	646	Open in IMG/M
3300031231\|Ga0170824_104217359	All Organisms → cellular organisms → Bacteria → Proteobacteria	586	Open in IMG/M
3300031231\|Ga0170824_113195770	All Organisms → cellular organisms → Bacteria → Proteobacteria	1615	Open in IMG/M
3300031231\|Ga0170824_115795348	All Organisms → cellular organisms → Bacteria	1664	Open in IMG/M
3300031231\|Ga0170824_127022728	All Organisms → cellular organisms → Bacteria → Proteobacteria	546	Open in IMG/M
3300031231\|Ga0170824_128007351	Not Available	528	Open in IMG/M
3300031469\|Ga0170819_10327211	All Organisms → cellular organisms → Bacteria → Proteobacteria	579	Open in IMG/M
3300031507\|Ga0307509_10000226	All Organisms → cellular organisms → Bacteria → Proteobacteria	90768	Open in IMG/M
3300031720\|Ga0307469_10783559	All Organisms → cellular organisms → Bacteria → Proteobacteria	873	Open in IMG/M
3300031938\|Ga0308175_101090150	Not Available	885	Open in IMG/M
3300031962\|Ga0307479_10005584	All Organisms → cellular organisms → Bacteria	11505	Open in IMG/M
3300032205\|Ga0307472_100564272	All Organisms → cellular organisms → Bacteria → Proteobacteria	997	Open in IMG/M
3300032783\|Ga0335079_10118649	All Organisms → cellular organisms → Bacteria → Proteobacteria	2987	Open in IMG/M
3300032829\|Ga0335070_10000560	All Organisms → cellular organisms → Bacteria → Proteobacteria	41640	Open in IMG/M
3300032954\|Ga0335083_10008819	All Organisms → cellular organisms → Bacteria	12286	Open in IMG/M
3300033180\|Ga0307510_10000010	All Organisms → cellular organisms → Bacteria → Proteobacteria	377457	Open in IMG/M
3300033180\|Ga0307510_10651718	Not Available	511	Open in IMG/M
3300034384\|Ga0372946_0489207	Not Available	597	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	55.56%
Host-Associated	Host-Associated	43.70%
Engineered	Engineered	0.74%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	51.85%
Plants	Host-Associated → Plants	42.96%
Aquatic	Environmental → Aquatic	3.70%
Human	Host-Associated → Human	0.74%
Solid Waste	Engineered → Solid Waste	0.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	48.15%
Rhizosphere	Host-Associated → Plants → Rhizosphere	26.67%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.37%
Roots	Host-Associated → Plants → Roots	5.93%
Plant Litter	Environmental → Terrestrial → Plant Litter	3.70%
Freshwater	Environmental → Aquatic → Freshwater	2.96%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.74%
Digestive System	Host-Associated → Human → Digestive System	0.74%
Grass	Engineered → Solid Waste → Grass	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	40.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.56%
Soil	Host-Associated → Plants → Rhizosphere → Soil	11.11%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.67%
Unclassified	Host-Associated → Plants → Roots → Unclassified	5.19%
Loam	Environmental → Terrestrial → Soil → Loam	4.44%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	3.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.70%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.96%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.96%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.74%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.74%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.74%
Composting	Engineered → Solid Waste → Grass → Composting	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.56%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	12.59%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	11.11%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.67%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	5.19%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.70%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	3.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.70%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.22%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.96%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.48%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.74%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.74%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.74%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.74%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.74%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	15.56%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	9.63%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	7.41%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	7.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.19%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	5.19%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	4.44%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	3.70%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	3.70%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.70%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.22%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.22%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.22%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.22%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.22%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.96%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.48%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.48%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.48%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.48%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.48%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.74%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.74%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.74%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.74%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.74%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.74%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.74%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.74%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.74%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.74%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.74%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459020	Litter degradation NP2	Engineered	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004801	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005260	Microbial communities on the surface of kaolinite enhanced biochar from soil with fertiliser in Sydney, Australia	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006638	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010877	Boreal forest soil eukaryotic communities from Alaska, USA - W3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300019270	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021151	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_06_16RNAfungal (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300022525	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022878	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L111-311C-4	Environmental	Open in IMG/M
3300022897	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L051-202B-4	Environmental	Open in IMG/M
3300022910	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L016-104C-6	Environmental	Open in IMG/M
3300023265	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L079-202R-5	Environmental	Open in IMG/M
3300023270	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L169-409R-5	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027738	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300030521	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM	Host-Associated	Open in IMG/M
3300031039	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PI 6C (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031507	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM	Host-Associated	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033180	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM	Host-Associated	Open in IMG/M
3300034384	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_KNG_2.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2NP_03194070	2170459020	Switchgrass, Maize And Mischanthus Litter	MVNGWRTQHEFKEWRLRAGAEGDQVRDHLRAAKDAAAQAARARAQQARDWASSRIDDLQQTVEAQPYRASAWALGAGFLAGILVMSLIRNSRR
JGIcombinedJ26739_1001514772	3300002245	Forest Soil	MNAKNGDLGAAGSGADGEQVKEHLRAAKDAAANAARARAQQARDWASSQLDDLQQRVEAQPYMASAWALGAGFLAGILLMSLVRNGRRR*
Ga0062387_1017479911	3300004091	Bog Forest Soil	RLEGWSMNSKNGDLGASGDTEQVKEHLRAAKDAAAHAARARAQQARDWAASQVGDMQQRIENQPYKASAWALGAGFLAGILLMSLVRNSRR*
Ga0062389_1012834941	3300004092	Bog Forest Soil	YPAHSGAMRLEGWSMNSKNGDLGASGDTEQVKEHLRAAKDAAAHAARARAQQARDWAASQVGDMQQRIENQPYKASAWALGAGFLAGILLMSLVRNSRR*
Ga0058860_108544901	3300004801	Host-Associated	MNAKNGDLGAGGADAEQVKEHLRAAKDAAASAARARAQQARDWASTQIDDLQQRVEAQPYMASAWALGAGFLAGILLMSLVRNSRR*
Ga0074072_10341421	3300005260	Soil	DTDQVKDHLRAAKDAAAHAARARAQQARDWASSRMDDLHQSVEAQPYRASAWALGAGFLAGILVMSLIRNSRD*
Ga0070658_110524671	3300005327	Corn Rhizosphere	MNAKNGGDLGAGGAETDQVKEHLRAARDAAASAARARAQQARDWASSRIDDLQESVEAQPYRASAWALGAGFLAGILVMSLIRNSRR*
Ga0070670_1003939642	3300005331	Switchgrass Rhizosphere	MNSKNGDYGAGADTDQVKDHLRAAKDAAAHAARARAQQARDWASSRMDDLQQSVEAQPYRASAWALGAGFLAGILVMSLIRNSRRD*
Ga0066388_1006239361	3300005332	Tropical Forest Soil	MNAKNGDVGGAPGADGEQMKEHLRAAKDAAASAARARARQARDWASSQIDDLQQQVEARPYAASAWALGVGFLAGVLLMGLVRGSRRSRFWG*
Ga0070666_102860022	3300005335	Switchgrass Rhizosphere	LKATRLYCTWLETLSMNSKNGDYGAGADTDQVKDHLRAAKDAAAHAARARAQQARDWASSRMDDLQQRVEAQPYRASAWALGAGFLAGILVMSLIRNSRRD*
Ga0070666_105811732	3300005335	Switchgrass Rhizosphere	KDHLRAAKDAAAHAARARAQQARDWASSRMDDLQQSVEAQPYRASAWALGAGFLAGILVMSLIRNSRRD*
Ga0070666_108546872	3300005335	Switchgrass Rhizosphere	LSMNSKNGDYGAGADTDQVKDHLRAAKDAAAHAARARAQQARDWASSRMDDLQQRVEAQPYRASAWALGAGFLAGILVMSLIRNSRRD*
Ga0070682_1011631531	3300005337	Corn Rhizosphere	MNSKNGDYGAGADTDQVKGHLRAAKDAAAHAARARAQQARDWASSRMDDLQQRVEAQPYRASAWALGAGFLAGILVMSLIRNSRRD*
Ga0070671_1003970062	3300005355	Switchgrass Rhizosphere	MNSKNGDYGAGADTDQVKDHLRAAKDAAAHAARARAQQARDWASSRMDDLQQRVEAQPYRASAWALGAGFLAGILVMSLIRNSRRD*
Ga0070663_1002344281	3300005455	Corn Rhizosphere	DYGAGADTDQVKDHLRAAKDAAAHAARARAQQARDWASSRMDDLQQSVEAQPYRASAWALGAGFLAGILVMSLIRNSRRDLKRASRRAGRQVPPPAQ
Ga0070741_100121346	3300005529	Surface Soil	MNAKNGDLGSGTGGSANTDQVKDHLRAAKDAAAQAARARAAQAQDWARSQLDELQGRVEARPFAASGIALGIGFIAGVLVMGLVRSGRR*
Ga0070741_103568792	3300005529	Surface Soil	MNAKNGDLGGGGDTEQVKEHLRAAKDAAAQAARARAQQARDWANSQIDDLQQRVEAQPYRATAWALGIGFLAGVLLMGLVRSGRG*
Ga0070734_102175441	3300005533	Surface Soil	MASKNGEFAATAEEGQVKDHLRAARDAAASAARARARQARDWASSQIDDLQESVESQPYKASAWALGAGFLAGILVMSLIRNSRRS*
Ga0070735_102474591	3300005534	Surface Soil	IMNAKNGDVGAGGDTENVKEHLRAAKDAAASAARARAEQAQNWARSQLEDLQHRVEAQPYKASAWALGAGFLAGILLMSLLRNNRQ*
Ga0070731_105653781	3300005538	Surface Soil	MNAKNGDIGTGDTEQVKEHLRAAKDAAASAARARAQQARDWASTQIDDLQQRVEAQPYMASAWALGAGFLAGILLMSLVRNGRRRS*
Ga0068853_1010900401	3300005539	Corn Rhizosphere	MNAKNGGDLGAGGAETDQVKEHLRAARDAAASAARARAQQARDWASSRIDDLQESVEAQPYRASAWALGAGFL
Ga0070732_102083641	3300005542	Surface Soil	MNAKNGDLGTGSGQDNEQVKEHLRAAKDAAASAARARARQAQDWARSQLDDMQERIEAQPYKASAWALGVGFLAGVLLMSLVRPGRR*
Ga0070665_1000535932	3300005548	Switchgrass Rhizosphere	MNSKNGDLGAGADSEQVKEHLRAAKDAAAHAARARAQQARDWASSRMDDLQQSVEAQPYKASAWALGAGFLAGILVMSLIRNSRR*
Ga0068856_1001552701	3300005614	Corn Rhizosphere	DTDQVKDHLRAAKDAAAHAARARAQQARDWASSRMDDLQQRVEAQPYRASAWALGAGFLAGILVMSLIRNSRRD*
Ga0068856_1010603752	3300005614	Corn Rhizosphere	MNSKNGELGAGADSEQVKEHLRAAKDAAAHAARARAQQARDWASSRMDDLQSRVEAQPYKASAWALGAGFLAGILLMSLIRNSRR*
Ga0068852_1028619391	3300005616	Corn Rhizosphere	MNAKNGGDLGAGGAEKDQVKEHLRAARDAAASAARARAQQARDWASSRIDDLQESVEAQPYRASAWALGAGFLAGILVMSLIRNSRR*
Ga0068863_1007753732	3300005841	Switchgrass Rhizosphere	DQVKDHLRAAKDAAAHAARARAQQARDWASSRMDDLQQSVEAQPYRASAWALGAGFLAGILVMSLIRNSRRD*
Ga0081455_105758581	3300005937	Tabebuia Heterophylla Rhizosphere	MNAKNGDLGSGGPGGDGEQVKDHLRAARDAAAQAARARAQQARDWASSQIDDLQRGVEARPYQATAWALGIGFLAGVLLMGLVRSGRR*
Ga0068871_1023638281	3300006358	Miscanthus Rhizosphere	TRLEILSMNSKNGDYGAGADTDQVKDHLRAAKDAAAHAARARAQQARDWASSRMDDLQQRVEAQPYRASAWALGAGFLAGILVMSLIRNSRRD*
Ga0075522_105878562	3300006638	Arctic Peat Soil	ADQVKEHLRAAKDAAAHAARAKAEQARSWANSQLADLQQRVESQPYKASAWALGAGFLAGILLMSLVRNGRRRGG*
Ga0073928_101666212	3300006893	Iron-Sulfur Acid Spring	MNAKNGDSGAGADSEQVKEHLRAAKDAAASAARARAQQARDWASSQIDDLQQRVEAQPYKASAWALGAGFLAGILLMSLV
Ga0105240_100980051	3300009093	Corn Rhizosphere	DYGAGADTDQVKDHLRAAKDAAAHAARARAQQARDWASSRMDDLQQSVEAQPYRASAWALGAGFLAGILVMSLIRNSRRD*
Ga0105240_101289103	3300009093	Corn Rhizosphere	MVHGLNGIRLEKLSMNSKNGDLGAGADSEQVKEHLRAAKDAAAHAARARAQQARDWASSRMDDLQSSVEAQPYKASAWALGAGFLAGILLMSLIR
Ga0105240_117536361	3300009093	Corn Rhizosphere	MNAKNGDLGGGADSEQVKEHLRAAKDAAAQAARARAQRARDWASSQFDDLQERVEARPYQASAVALGIGF
Ga0105245_118261661	3300009098	Miscanthus Rhizosphere	MVHGLNGIRLEKLSMNSKNGDLGAGADSEQVKEHLRAAKDAAAHAARARAQQARDWASSRMDDLQSSVEAQPYKASAWALGAGFLAGILLMSLIRNSRR*
Ga0105237_109664551	3300009545	Corn Rhizosphere	SKNGDYGAGADTDQVKDHLRAAKDAAAHAARARAQQARDWASSRMDDLQQRVEAQPYRASAWALGAGFLAGILVMSLIRNSRRD*
Ga0105237_110124212	3300009545	Corn Rhizosphere	MTSKNGDYGAGQDGEQVRDHLRAAKDAAAHAARARAQQARDWASSRIDDLQESVEAQPYKASAWALGAGFLAGILVMSLIRNSRR*
Ga0105238_113452341	3300009551	Corn Rhizosphere	GDYGAGADTDQVKDHLRAAKDAAAHAARARAQQARDWASSRMDDLQQRVEAQPYRASAWALGAGFLAGILVMSLIRNSRRD*
Ga0105239_106471882	3300010375	Corn Rhizosphere	MNSKNGDYGAGADTDQVKDHLRAAKDAAAHAARARAQQARDWASSRMDDLQQSVEAQPYRASAWALGAGFLAGILVMSLIRNSRRG*
Ga0134124_118909062	3300010397	Terrestrial Soil	LKGTLLEMETVGELSMNSKNGDYGAGGETDQVKDHLRAAKDAAANAARARAQQARDWASSRIDDLQQSVEAQPYRASAWALGAGFLAGILVMSLIRNSRR*
Ga0134124_121397592	3300010397	Terrestrial Soil	MNAKNGDLGAGGGDAEQVKEHLRAAKDAAASAARARAQQARDWASTQIDDLQQRVEAQPYMASAWALGAGFLAGILLMSLVRNSRR*
Ga0126361_103466511	3300010876	Boreal Forest Soil	MNAKNGDLGAGADGEQVKEHLRAAKDAAAHAARARAQQARDWASSQIDDLQHRVESQPYKASAWALGAGFLAGILL
Ga0126356_111552812	3300010877	Boreal Forest Soil	MNSKNGDLGAGADSEQVKEHLRAAKDAAAHAARARAQQARDWASSQIDDLQQRVESQPYKASAWALGAGFLAGILLMSLVRNSRR*
Ga0150983_164714562	3300011120	Forest Soil	MNAKNGDIGSGADTEQVKEHLRAAKDAAASAARARAQQARDWASSQIDDLQQRVEAQPYMASAWALGAGFLAGILLMSLVRNGRRR*
Ga0137381_104584412	3300012207	Vadose Zone Soil	MNAKNGDVGTGADTEQVKEHLRAAKDAAATAARARAQQARDWASTQIDGLQQRVEEQPYMASAWALGAGFLAGVLVMSLLRNGRRRT*
Ga0150985_1041188632	3300012212	Avena Fatua Rhizosphere	MNARNGDLGTEADAEQVKEHLRAAKDAAASAARARAQQARDWASSQIDDLQQRVEAQPYIASAWALGAGFLAGILLMSLVRSSRS*
Ga0150985_1047442592	3300012212	Avena Fatua Rhizosphere	VGELSMNSKNGDLGASEDADHVREHLRAAKDAAAQAARVRAQQAREWASSRIDDLQQSVEAQPYRASAWALGAGFLAGILVMSLIRNSRRD*
Ga0150985_1068125311	3300012212	Avena Fatua Rhizosphere	MNAKNGDYGAGADTDQVKDHLRAAKDAAAHAARARAQQARDWASSRMDDLQQSVEAQPYRASAWALGAGFLAGILVMSLIRNSRRD*
Ga0150985_1210825151	3300012212	Avena Fatua Rhizosphere	KNGDYGAGADTDQVKDHLRAAKDAAAHAARARAQQARDWASSRMDDLQQRVESQPYQASAWALGAGFLAGILVMSLIRNSRRD*
Ga0150985_1217227091	3300012212	Avena Fatua Rhizosphere	EILSMNSKNGDYGAGADTDQVKDHLRAAKDAAAHAARARAQQARDWASSRMDDLQQSVEAQPYRASAWALGAGFLAGILVMSLIRNSRRD*
Ga0137386_102764492	3300012351	Vadose Zone Soil	MNAKNGDVGTGADTEQVKEHLRAAKDAAASAARARAQQARDWASTQIDGLQQRVEEQPYMASAWALGAGFLAGILVMSLLRNGRRRT*
Ga0137385_114111691	3300012359	Vadose Zone Soil	MNAKNGDIGAGADAEQVKEHLRAAKDAAASAARARAQQARDWASTQIDDLQQRVEAQPYMASAWALGAGFLAGILLMSLVRNGRRR*
Ga0150984_1030645162	3300012469	Avena Fatua Rhizosphere	YTDTVGELSMNSKNGDLGASEDADHVREHLRAAKDAAAQAARVRAQQAREWASSRIDDLQQSVEAQPYRASAWALGAGFLAGILVMSLIRNSRRD*
Ga0150984_1100163361	3300012469	Avena Fatua Rhizosphere	QVKEHLRAAKDAAASAARARAQQARDWASSQIDDLQQRVEAQPYIASAWALGAGFLAGILLMSLVRSSRS*
Ga0137359_105682172	3300012923	Vadose Zone Soil	MNAKNGDLGAGGDGGADAEKVKEHLRAAKDAAASAARARAQQARDWASTQIDDLQQRVEAQPYMASAWALGAGFLAGILLMSLVRNGRRR*
Ga0137359_107301022	3300012923	Vadose Zone Soil	KEHLRAAKDAAASAARARAQQARDWASTQIDGLQQRVEEQPYMASAWALGAGFLAGILVMSLLRNGRRRT*
Ga0137413_1000130911	3300012924	Vadose Zone Soil	MNSKNGDLGAGADSEQVKDHLRAAKDAAASAARVRAQQARDWASSRIDDLQSSVEAQPYKASAWALGAGFLAGILVMSLIRNSRR*
Ga0137413_101319282	3300012924	Vadose Zone Soil	MNAKNGDLGAGADTDQVKEHLRAAKDAAASAARARASQARDWARSQVDDLQQRVEAQPYKASAWALGAGFLAGILLMSLVR
Ga0137413_101547432	3300012924	Vadose Zone Soil	MNAKNGDVGAAGADAEQVKEHLRAAKDAAANAARARAQQARDWASSQIDDLQQRVEAQPYMASAWALGAGFLAGILLMSLVRNGRRR*
Ga0137413_108120441	3300012924	Vadose Zone Soil	MNAKNGDLGAGGADAEQVKEHLRAAKDAAASAARARAQQARDWASTQIDDLQQRVEAQPYMASAWALGAGFLAGILLMSLVRNGRRR*
Ga0137413_118027131	3300012924	Vadose Zone Soil	MNAKNGDLGTGADTEQVKEHLRAAKDAAASAARARAQQARDWASTQIDGLQQRVEEQPYMASAWALGAGFLAGILLMSLVRNGRRR*
Ga0137416_1000108510	3300012927	Vadose Zone Soil	MNAKNGDLGAGADTEQVKEHLRAAKDAAASAARARASQARDWARSQVDDLQQRVEAQPYKASAWALGAGFLAGILLMSLVRNSRR*
Ga0137416_111624222	3300012927	Vadose Zone Soil	MNAKNGDTGSGADAEQVKEHLRAAKDAAASAARARAQQARDWASTQIDDLQQRVEAQPYMASAWALGAGFLAGILLMSLVRNGRRR*
Ga0137404_100447853	3300012929	Vadose Zone Soil	MNAKNGDVGTGADTEQVKDHLRAAKDAAASAARARAQQARDWASTQIDGLQQRVEEQPYMASAWALGAGFLAGILVMSLLRNGRRRT*
Ga0137407_112769361	3300012930	Vadose Zone Soil	MNAKNGDLGAGAGADGEQVKEHLRAAKDAAASAARARAQQARDWASSQIDDLQQRVEAQPYMASAWALGAGFLAGILLMSLVRNSRR*
Ga0157373_113685122	3300013100	Corn Rhizosphere	MNSKNGDYGAGADTDQVKDHLRAAKDAAAHAARARAQQARDWASSRMDDLQQRVEAQPYRASAWALGAGFLAGILVMSL
Ga0157374_115670002	3300013296	Miscanthus Rhizosphere	MNSKNGDYGAGADTDQVKDHLRAAKDAAAHAARARAQQARDWASSRMDDLQQSVEAQPYRASAWALGAVFLAGILVMSLIRNSRRD*
Ga0157378_117047531	3300013297	Miscanthus Rhizosphere	MNSKNGDYGAGADTDQVKDHLRAAKDAAAHAARARAQQARDWASSRMDDLQQSVESQPYRASAWALGAGFLAGILVMSLIRNSRRD*
Ga0181534_100093922	3300014168	Bog	MNSKNGDHGAGEDAGQVKEHLRAAKDAAAHAARARAQQARDWASSRIDDLQQSVEAQPYRASAWALGAGFLAGILVMSLIKNSRRD*
Ga0182024_112249181	3300014501	Permafrost	MNAKNGDLGVAADGEQVKEHLRAAKDAAAHAARAKAQQARNWASSQLADLQERVEAQPYKASAWALGAGFLAGILLMSLVRNSRR*
Ga0157379_101722852	3300014968	Switchgrass Rhizosphere	MNAKNGDLGSGGAGADGEQVKEHLRAAKDAAAQAARARAQQARDWASSQIDDLQQRVEAQPYRATAWALGVGFLAGVLLMGLVRSGRR*
Ga0157376_115689511	3300014969	Miscanthus Rhizosphere	MNSKNGDYGAGADQDQVKDHLRAAKDAAAHAARARAQQARDWASSRMDDLQQSVEAQPYRASAWALGAGFLAGILVMSLIRNSRRD*
Ga0137403_100172484	3300015264	Vadose Zone Soil	MRTDLESEMNAKNGDVGSGADAEQVKEHLRAAKDAAAGAARARAQQARDWASTQIDDLQQRVEAQPYMASAWALGAGFLAGILLMSLIRNGRRR*
Ga0137403_106725012	3300015264	Vadose Zone Soil	AGADAEQVKEHLRAAKDAAASAARARAQQARDWASTQIDDLQRRVEAQPYMASAWALGAGFLAGILLMSLVRNGRRR*
Ga0181512_16273282	3300019270	Peatland	MNSKNGDHGAGEDAGQVKEHLRAAKDAAAHAARARAQQARDWASSRIDDLQQSVEAQPYRASAWALGAGFLAGILVMSLIKNSRRD
Ga0179584_14364341	3300021151	Vadose Zone Soil	PARLENAMNAKNGDLGTGADTEQVKEHLRAAKDAAASAARARAQQARDWASTQIDGLQQRVEEQPYMASAWALGAGFLAGILVMSLLRNGRRRT
Ga0210406_102798491	3300021168	Soil	DSEQVKEHLRAAKDAAASAARARAQQARDWASSQIDDLQQRVEAQPYKASAWALGAGFLAGILLMSLVRNSRR
Ga0210406_109345261	3300021168	Soil	MNAKNGDTESIADAEQVKEHLRAAKDAAASAARARAQQARDWASSQINDLQERVERQPYMASAWALGAGFLAGILLMSLVRNGRRQ
Ga0210400_115184211	3300021170	Soil	MNAKNGDLGAGGDSEQVKEHLRAAKDAAASAARARAQQARDWASSQIDDLQQRVEAQPYKASAWALGAGFLAGILLMSLVRNSRR
Ga0213874_101757962	3300021377	Plant Roots	MNAKNGDVGAGSDADQVRDHLRAAKEAAASAARARAQQAQDWARSQWSDWQDRVEAEPYKASAWALGAGFLAGILLMSMLRSGRS
Ga0210390_103105852	3300021474	Soil	MNAKNGDLGAGVGADTDQVKEHLRAAKDAAAHAARAKAQQARNWASSQLGDLQERVEAQPYKASAWALGAGFLAGILLMSLMRNSRRSGG
Ga0242656_10854591	3300022525	Soil	TESIADAEQVKEHLRAAQDAAASAARARAQQALDWASSQINDLQERVERQPYMASAWALGAGFLAGILLMSLVRNGRRQ
Ga0247761_10856961	3300022878	Plant Litter	MNSKKGDLGAGENADQVRDHLRAAKDAAANAARARAQQARDWASSRIDDLQESVEAQPYRASAWALGAG
Ga0247764_10708622	3300022897	Plant Litter	MNSKNGDLGAGESADQVRDHLRAAKDAAANAARARAQQARDWASSRIDDLQESVEAQPYRASAWALGAGFLAGILLMSLIKTSRRD
Ga0247768_10020471	3300022910	Plant Litter	MNSKKGDLGAGENADQVRDHLRAAKDAAANAARARAQQARDWASSRIDDLQESVEAQPYRASAWALGAGFLAGILLMSLIKNSRRD
Ga0247780_11973391	3300023265	Plant Litter	MNSKNGDYGAGEDADHVRDHLRAAKDAAAHAARARAQQARDWASSRIDDLQQSVEAQPYRASAWALGAGFLAGILVMSLIRNSRRD
Ga0247784_10924842	3300023270	Plant Litter	MNSKKGDLGAGENADQVRDHLRAAKDAAANAARARAQQARDWASSRIDDLQESVEAQPYRASAWALGAGFLAGILLM
Ga0137417_14966002	3300024330	Vadose Zone Soil	MNAKNGDLGAGGADAEQVKEHLRAAKDAAASAARARAQQARDWASTQIDDLQQRVEAQPYMASAWALGAGFLAGILLMSLVRNGRRR
Ga0207680_101251172	3300025903	Switchgrass Rhizosphere	MNSKNGDYGAGADTDQVKDHLRAAKDAAAHAARARAQQARDWASSRMDDLQQRVEAQPYRASAWALGAGFLAGILVMSLIRNSRRD
Ga0207647_100395412	3300025904	Corn Rhizosphere	LKATRLYCTWLETLSMNSKNGDYGAGADTDQVKDHLRAAKDAAAHAARARAQQARDWASSRMDDLQQRVEAQPYRASAWALGAGFLAGILVMSLIRNSRRD
Ga0207705_107261192	3300025909	Corn Rhizosphere	MNAKNGGDLGAGGAETDQVKEHLRAARDAAASAARARAQQARDWASSRIDDLQESVEAQPYRASAWALGAGFLAGILVMSLIRNSRR
Ga0207695_104163691	3300025913	Corn Rhizosphere	MNSKNGDLGAGADSEQVKEHLRAAKDAAAHAARARAQQARDWASSRMDDLQSSVEAQPYKASAWALGAGFLAGILLMSLIRN
Ga0207695_109286941	3300025913	Corn Rhizosphere	KRTRWEILSMNSKNGDYGAGADTDQVKDHLRAAKDAAAHAARARAQQARDWASSRMDDLQQRVEAQPYRASAWALGAGFLAGILVMSLIRNSRRD
Ga0207695_111100351	3300025913	Corn Rhizosphere	WNNRSVAPLKATRLYCTWLETLSMNSKNGDYGAGADTDQVKDHLRAAKDAAAHAARARAQQARDWASSRMDDLQQRVEAQPYRASAWALGAGFLAGILVMSLIRNSRRD
Ga0207671_110443291	3300025914	Corn Rhizosphere	LSMNSKNGDYGAGADTDQVKDHLRAAKDAAAHAARARAQQARDWASSRMDDLQQRVEAQPYRASAWALGAGFLAGILVMSLIRNSRRD
Ga0207671_114627311	3300025914	Corn Rhizosphere	MTSKNGDYGAGQDGEQVRDHLRAAKDAAAHAARARAQQARDWASSRIDDLQESVEAQPYKASAWALGAGFLAGILVM
Ga0207694_114728372	3300025924	Corn Rhizosphere	MVHGLNGIRLEKLSMNSKNGDLGAGADSEQVKEHLRAAKDAAAHAARARAQQARDWASSRMDDLQSSVEAQPYKASAWALGAGFLAGILLMSLI
Ga0207687_112299731	3300025927	Miscanthus Rhizosphere	MVHGLNGIRLEKLSMNSKNGDLGAGADSEQVKEHLRAAKDAAAHAARARAQQARDWASSRMDDLQSSVEAQPYKASAWALGAGFLAGILLMSLIRNSRR
Ga0207644_101223331	3300025931	Switchgrass Rhizosphere	MNAKNGDLGAGGGDAEQVKEHLRAAKDAAASAARARAQQARDWASTQIDDLQQRVEAQPYMASAWALGAGFLAGILLMSLVRNSRR
Ga0207712_107162651	3300025961	Switchgrass Rhizosphere	GWRDSMNAKNGGDLGAGGAETDQVKEHLRAARDAAASAARARAQQARDWASSRIDDLQESVEAQPYRASAWALGAGFLAGILVMSLIRNSRR
Ga0207658_110088772	3300025986	Switchgrass Rhizosphere	NRSVAPLKATRLYCTWLETLSMNSKNGDYGAGADTDQVKDHLRAAKDAAAHAARARAQQARDWASSRMDDLQQRVEAQPYRASAWALGAGFLAGILVMSLIRNSRRD
Ga0209328_101336491	3300027727	Forest Soil	MNAKNGDLGAAGSGADGEQVKEHLRAAKDAAANAARARAQQARDWASSQLDDLQQRVEAQPYMASAWALGAGFLAGILLMSLVRNGRRR
Ga0208989_102011052	3300027738	Forest Soil	MNAKNGDVGAGADSEQAQVKEHLRAAKDAAANAARARAQQARDWASTQIDDLQQRVEAQPYIASAWALGAGFLAGILLMSLMRNGRRR
Ga0209060_102567712	3300027826	Surface Soil	MASKNGEFAATAEEGQVKDHLRAARDAAASAARARARQARDWASSQIDDLQESVESQPYKASAWALGAGFLAGILVMSLIRNSRRS
Ga0209580_101645832	3300027842	Surface Soil	MNAKNGDLGTGSGQDNEQVKEHLRAAKDAAASAARARARQAQDWARSQLDDMQERIEAQPYKASAWALGVGFLAGVLLMSLVRPGRR
Ga0209579_105285912	3300027869	Surface Soil	MNAKNGDIGTGDTEQVKEHLRAAKDAAASAARARAQQARDWASTQIDDLQQRVEAQPYMASAWALGAGFLAGILLMSLVRNGRRRS
Ga0209488_102411362	3300027903	Vadose Zone Soil	MNAKNGDVGAAGADAEQVKEHLRAAKDAAANAARARAQQARDWASSQIDDLQQRVEAQPYMASAWALGAGFLAGILLMSLVRNGRRR
Ga0209168_102007791	3300027986	Surface Soil	IMNAKNGDVGAGGDTENVKEHLRAAKDAAASAARARAEQAQNWARSQLEDLQHRVEAQPYKASAWALGAGFLAGILLMSLLRNNRQ
Ga0268266_100363673	3300028379	Switchgrass Rhizosphere	MNSKNGDLGAGADSEQVKEHLRAAKDAAAHAARARAQQARDWASSRMDDLQQSVEAQPYKASAWALGAGFLAGILVMSLIRNSRR
Ga0268265_106609521	3300028380	Switchgrass Rhizosphere	MNAKNGGDLGAGGAETDQVKEHLRAARDAAASAARARAQQARDWASSRIDDLQESVEAQPYRASAWALGAGFLAGILVMSLIR
Ga0268265_123266621	3300028380	Switchgrass Rhizosphere	DQVKDHLRAAKDAAAHAARARAQQARDWASSRMDDLQQRVEAQPYRASAWALGAGFLAGILVMSLIRNSRRD
Ga0137415_1000005012	3300028536	Vadose Zone Soil	MNAKNGDLGAGVDTEQVKEHLRAAKDAAASAARARASQARDWARSQVDDLQQRVEAQPYKASAWALGAGFLAGILLMSLVRNSRR
Ga0137415_113937481	3300028536	Vadose Zone Soil	MNAKNGDTGSGADAEQVKEHLRAAKDAAASAARARAQQARDWASTQIDDLQQRVEAQPYMASAWALGAGFLAGILLMSLVRNGRRR
Ga0307511_1000003547	3300030521	Ectomycorrhiza	MNAKNGDTGSGADTEQVKEHLRAAKDAAASAARARAQQARDWASTQIDDLQQRVEAQPYMASAWALGAGFLAGILLMSLVRNGRRRT
Ga0307511_101015992	3300030521	Ectomycorrhiza	MNAKNGDLGAGADAEQVKDHLRAAKDAAASAARARAQQARDWASSQIDDLQHRVESQPYKASAWALGAGFLAGILVMSLVRNSRR
Ga0307511_104017221	3300030521	Ectomycorrhiza	MNAKNGDLGTGADTEQVKEHLRAAKDAAASAARARAQQARNWASSQIDDLQQRVEEQPYMASAWALGAGFLAGILVMSLLRNGRR
Ga0102760_106756242	3300031039	Soil	MNASAKNGDIGSGADAEQVKEHLRAAKDAAASAARARAQQARDWASTQIDDLQQRVEAQPYMASAWALGAGFLAGILLMSLVRNGRRRSSG
Ga0170824_1012308522	3300031231	Forest Soil	MNSKNGDHGAGGDTDQVKDHLRAAKDAAAQAARARAQQARDWASSRIDDLQQSVEAQPYRASAWALGAGFLAGILVMSLIRN
Ga0170824_1042173592	3300031231	Forest Soil	MNAKNGDIGSGADTEQVKEHLRAAKDAAANAARARAQQAKDWASTQLDGLQQRVESQPYMASAWALGAGFLAGILLMSLVRNGRRR
Ga0170824_1131957702	3300031231	Forest Soil	MNAKNGDVGAGADGEQVKEHLRAAKDAAAHAARARAQQARDWASSQIDDLQQRVESQPYKASAWALGAGFLAGILLMSLVRNTRR
Ga0170824_1157953481	3300031231	Forest Soil	MNAKNGDLGTGADTEQVKEHLRAAKDAAGNAARARAQQAREWASSQIDDLQQRVEAQPYKASAWALGAGFLAGILLMSLVRNSRR
Ga0170824_1270227282	3300031231	Forest Soil	MNSKNGDLGAGADSEQVKEHLRAAKDAASQAARARARQAHDWASSQIDDLQHRVESQPYKASAWALGAGFLAGILLMSLVRNTRK
Ga0170824_1280073511	3300031231	Forest Soil	MNSKNGDLGAGADSEQVKEHLRAAKDAAASAARARAQQARDWASSQIDDLQHRVEAQPYKASAWALGAGFLAGILLMSLVRNSRR
Ga0170819_103272112	3300031469	Forest Soil	GADGEQVKEHLRAAKDAAAHAARARAQQARDWASSQIDDLQQRVESQPYKASAWALGAGFLAGILLMSLVRNTRR
Ga0307509_1000022645	3300031507	Ectomycorrhiza	MNAKNGDLGANADADAEQVKEHLRAAKDAAASAARARAQQARDWASSQINDLQQRVEAQPYKASAWALGAGFLAGILLMSLVRNSRR
Ga0307469_107835592	3300031720	Hardwood Forest Soil	KNGDLGAGADSEQVKEHLRAAKDAAAQAARARAQQARDWASSQIDDLQQRVEAQPYKASAWALGAGFLAGILLMSLVRNSRR
Ga0308175_1010901502	3300031938	Soil	MNSKNGDYGAGADQDQVKDHLRAAKDAAAHAARARAQQARDWASSRMDDLQQSVEAQPYRASAWALGAGFLAGILVMSLIRNSRRD
Ga0307479_100055848	3300031962	Hardwood Forest Soil	MNAKNGDTGSGADAEPVKEHLRAAKDAAASAARARAQQARDWASSQIDDLQQRVEAQPYMASAWALGAGFLAGILLMSLVRNGRRR
Ga0307472_1005642721	3300032205	Hardwood Forest Soil	MNAKNGDLGPGAGADGEQVKEHLRAAKDAAAGAARARAQQARDWASSQIDDLQHRVEAEPYKASAWALGVGFLAGILLMSLLRGGRR
Ga0335079_101186492	3300032783	Soil	MASKNGESGVGSDGEQVKEHLRAARDAAASAARSRARQAQEWARVQIGELQERLEAQPYRASAWALGAGFLAGILIMSLVHNRRR
Ga0335070_1000056011	3300032829	Soil	MNANKGESGAGTEAEQVKEHLRAARDAAAQAARSRARQAGKWARDQFDDLQQRVEAQPYRASAWALGVGFLAGILLMSLVKTGRR
Ga0335083_100088195	3300032954	Soil	MNANKGESGAGTEAEQVKEHLRAARDAAAQAARSRARQAGKWARDQFDDLQERVEAQPYRASAWALGVGFLAGILLMSVLRTGRR
Ga0307510_10000010169	3300033180	Ectomycorrhiza	MNSKNGDHGAGGDADQVKDHLRAAKDAAAQAARARAQQARDWASSRIDDLQQSVEAQPYRASAWALGAGFLAGILVMSLIRNSRR
Ga0307510_106517182	3300033180	Ectomycorrhiza	MNSKNGDHGAGGDTDQVKDHLRAAKDAAAQAARARAQQARDWASSRIDDLQQSVEAQPYRASAWALGAGFLAGILVMSLIRNSRR
Ga0372946_0489207_135_407	3300034384	Soil	MNAKNGDLGAGSGSGADGEQVKEHLRAAKDAATNAARARAQQARDWASSQIDDLQQRVEAQPYVASAWALGAGFLAGILLMSLVRNGRRR

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F058180

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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