NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F058311

Metagenome Family F058311

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F058311
Family Type Metagenome
Number of Sequences 135
Average Sequence Length 43 residues
Representative Sequence SVTVEDRADLDRMAPGVADAIARGAAAFKPSYVVPSTPGALP
Number of Associated Samples 109
Number of Associated Scaffolds 135

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 2.22 %
% of genes near scaffold ends (potentially truncated) 97.78 %
% of genes from short scaffolds (< 2000 bps) 86.67 %
Associated GOLD sequencing projects 100
AlphaFold2 3D model prediction Yes
3D model pTM-score0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(35.556 % of family members)
Environment Ontology (ENVO) Unclassified
(35.556 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(49.630 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 25.71%    β-sheet: 0.00%    Coil/Unstructured: 74.29%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.52
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 135 Family Scaffolds
PF10646Germane 54.07
PF01138RNase_PH 10.37
PF03725RNase_PH_C 7.41
PF01725Ham1p_like 2.96
PF00730HhH-GPD 2.22
PF01520Amidase_3 0.74
PF02517Rce1-like 0.74
PF02738MoCoBD_1 0.74

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 135 Family Scaffolds
COG0689Ribonuclease PHTranslation, ribosomal structure and biogenesis [J] 17.78
COG1185Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase)Translation, ribosomal structure and biogenesis [J] 17.78
COG2123Exosome complex RNA-binding protein Rrp42, RNase PH superfamilyIntracellular trafficking, secretion, and vesicular transport [U] 17.78
COG0127Inosine/xanthosine triphosphate pyrophosphatase, all-alpha NTP-PPase familyNucleotide transport and metabolism [F] 2.96
COG01223-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylaseReplication, recombination and repair [L] 2.22
COG0177Endonuclease IIIReplication, recombination and repair [L] 2.22
COG1059Thermostable 8-oxoguanine DNA glycosylaseReplication, recombination and repair [L] 2.22
COG1194Adenine-specific DNA glycosylase, acts on AG and A-oxoG pairsReplication, recombination and repair [L] 2.22
COG22313-Methyladenine DNA glycosylase, HhH-GPD/Endo3 superfamilyReplication, recombination and repair [L] 2.22
COG0860N-acetylmuramoyl-L-alanine amidaseCell wall/membrane/envelope biogenesis [M] 0.74
COG1266Membrane protease YdiL, CAAX protease familyPosttranslational modification, protein turnover, chaperones [O] 0.74
COG4449Predicted protease, Abi (CAAX) familyGeneral function prediction only [R] 0.74

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000955|JGI1027J12803_106314270All Organisms → cellular organisms → Bacteria → Acidobacteria771Open in IMG/M
3300002908|JGI25382J43887_10133331All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1279Open in IMG/M
3300002914|JGI25617J43924_10001589All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis5968Open in IMG/M
3300003367|JGI26338J50219_1014598All Organisms → cellular organisms → Bacteria → Acidobacteria666Open in IMG/M
3300004114|Ga0062593_102658255All Organisms → cellular organisms → Bacteria → Acidobacteria569Open in IMG/M
3300005180|Ga0066685_10965088All Organisms → cellular organisms → Bacteria → Acidobacteria565Open in IMG/M
3300005343|Ga0070687_100478089All Organisms → cellular organisms → Bacteria → Acidobacteria834Open in IMG/M
3300005518|Ga0070699_100133380All Organisms → cellular organisms → Bacteria2190Open in IMG/M
3300005541|Ga0070733_10452210All Organisms → cellular organisms → Bacteria → Acidobacteria857Open in IMG/M
3300005554|Ga0066661_10031774All Organisms → cellular organisms → Bacteria2920Open in IMG/M
3300005555|Ga0066692_10667541All Organisms → cellular organisms → Bacteria → Acidobacteria647Open in IMG/M
3300005561|Ga0066699_10176683All Organisms → cellular organisms → Bacteria1475Open in IMG/M
3300005566|Ga0066693_10382255All Organisms → cellular organisms → Bacteria → Acidobacteria570Open in IMG/M
3300005586|Ga0066691_10030906All Organisms → cellular organisms → Bacteria2764Open in IMG/M
3300005598|Ga0066706_10874652All Organisms → cellular organisms → Bacteria → Acidobacteria702Open in IMG/M
3300005921|Ga0070766_11143467All Organisms → cellular organisms → Bacteria → Acidobacteria538Open in IMG/M
3300006050|Ga0075028_101062259All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium506Open in IMG/M
3300006176|Ga0070765_100630033All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1012Open in IMG/M
3300006176|Ga0070765_100953777All Organisms → cellular organisms → Bacteria → Acidobacteria811Open in IMG/M
3300006354|Ga0075021_10561769All Organisms → cellular organisms → Bacteria → Acidobacteria726Open in IMG/M
3300006791|Ga0066653_10633864All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium546Open in IMG/M
3300006794|Ga0066658_10062300All Organisms → cellular organisms → Bacteria1641Open in IMG/M
3300006796|Ga0066665_10334296All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1230Open in IMG/M
3300006796|Ga0066665_10903195All Organisms → cellular organisms → Bacteria → Acidobacteria684Open in IMG/M
3300006893|Ga0073928_10947093All Organisms → cellular organisms → Bacteria → Acidobacteria588Open in IMG/M
3300007255|Ga0099791_10245134All Organisms → cellular organisms → Bacteria → Acidobacteria849Open in IMG/M
3300007258|Ga0099793_10001158All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae8191Open in IMG/M
3300007258|Ga0099793_10258080All Organisms → cellular organisms → Bacteria → Acidobacteria842Open in IMG/M
3300007258|Ga0099793_10260488All Organisms → cellular organisms → Bacteria → Acidobacteria838Open in IMG/M
3300009012|Ga0066710_100011623All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae8984Open in IMG/M
3300009012|Ga0066710_100265078All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2495Open in IMG/M
3300009038|Ga0099829_10843684All Organisms → cellular organisms → Bacteria → Acidobacteria761Open in IMG/M
3300009088|Ga0099830_10359571All Organisms → cellular organisms → Bacteria1172Open in IMG/M
3300009088|Ga0099830_10362808All Organisms → cellular organisms → Bacteria1167Open in IMG/M
3300009088|Ga0099830_11137257All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium648Open in IMG/M
3300009088|Ga0099830_11720798All Organisms → cellular organisms → Bacteria → Acidobacteria523Open in IMG/M
3300009089|Ga0099828_11201476All Organisms → cellular organisms → Bacteria → Acidobacteria672Open in IMG/M
3300009089|Ga0099828_11517610All Organisms → cellular organisms → Bacteria → Acidobacteria591Open in IMG/M
3300009143|Ga0099792_10679316All Organisms → cellular organisms → Bacteria → Acidobacteria664Open in IMG/M
3300010048|Ga0126373_12710686All Organisms → cellular organisms → Bacteria → Acidobacteria553Open in IMG/M
3300010337|Ga0134062_10063122All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1533Open in IMG/M
3300010359|Ga0126376_12185727All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium598Open in IMG/M
3300010361|Ga0126378_13198952All Organisms → cellular organisms → Bacteria → Acidobacteria521Open in IMG/M
3300010366|Ga0126379_10237813All Organisms → cellular organisms → Bacteria → Acidobacteria1783Open in IMG/M
3300011120|Ga0150983_12699589All Organisms → cellular organisms → Bacteria → Acidobacteria1557Open in IMG/M
3300011270|Ga0137391_10960361All Organisms → cellular organisms → Bacteria → Acidobacteria697Open in IMG/M
3300011271|Ga0137393_10373908All Organisms → cellular organisms → Bacteria → Acidobacteria1219Open in IMG/M
3300012096|Ga0137389_10361753All Organisms → cellular organisms → Bacteria → Proteobacteria1236Open in IMG/M
3300012096|Ga0137389_10572797All Organisms → cellular organisms → Bacteria → Acidobacteria970Open in IMG/M
3300012198|Ga0137364_10631882All Organisms → cellular organisms → Bacteria → Acidobacteria807Open in IMG/M
3300012200|Ga0137382_10926657All Organisms → cellular organisms → Bacteria → Acidobacteria627Open in IMG/M
3300012202|Ga0137363_10251243All Organisms → cellular organisms → Bacteria1437Open in IMG/M
3300012202|Ga0137363_10369811All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1190Open in IMG/M
3300012202|Ga0137363_11056940All Organisms → cellular organisms → Bacteria → Acidobacteria690Open in IMG/M
3300012202|Ga0137363_11674265All Organisms → cellular organisms → Bacteria → Acidobacteria528Open in IMG/M
3300012203|Ga0137399_10610761All Organisms → cellular organisms → Bacteria917Open in IMG/M
3300012208|Ga0137376_10822235All Organisms → cellular organisms → Bacteria → Acidobacteria799Open in IMG/M
3300012285|Ga0137370_10299089All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium961Open in IMG/M
3300012351|Ga0137386_11083016All Organisms → cellular organisms → Bacteria → Acidobacteria566Open in IMG/M
3300012356|Ga0137371_10206409All Organisms → cellular organisms → Bacteria1538Open in IMG/M
3300012361|Ga0137360_10224717All Organisms → cellular organisms → Bacteria1531Open in IMG/M
3300012362|Ga0137361_10653439All Organisms → cellular organisms → Bacteria962Open in IMG/M
3300012582|Ga0137358_10549890All Organisms → cellular organisms → Bacteria → Acidobacteria776Open in IMG/M
3300012918|Ga0137396_10376321All Organisms → cellular organisms → Bacteria1052Open in IMG/M
3300012922|Ga0137394_10507001All Organisms → cellular organisms → Bacteria1025Open in IMG/M
3300012922|Ga0137394_10675419All Organisms → cellular organisms → Bacteria → Acidobacteria870Open in IMG/M
3300012922|Ga0137394_11431959All Organisms → cellular organisms → Bacteria → Acidobacteria551Open in IMG/M
3300012927|Ga0137416_10076807All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia2441Open in IMG/M
3300012944|Ga0137410_11449836All Organisms → cellular organisms → Bacteria → Acidobacteria598Open in IMG/M
3300012964|Ga0153916_12656410All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium564Open in IMG/M
3300013832|Ga0120132_1154914All Organisms → cellular organisms → Bacteria503Open in IMG/M
3300014157|Ga0134078_10209188All Organisms → cellular organisms → Bacteria → Acidobacteria800Open in IMG/M
3300015052|Ga0137411_1035732All Organisms → cellular organisms → Bacteria1601Open in IMG/M
3300015052|Ga0137411_1099509All Organisms → cellular organisms → Bacteria1564Open in IMG/M
3300015052|Ga0137411_1099510All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1262Open in IMG/M
3300015053|Ga0137405_1404015All Organisms → cellular organisms → Bacteria2108Open in IMG/M
3300017936|Ga0187821_10048389All Organisms → cellular organisms → Bacteria1522Open in IMG/M
3300017966|Ga0187776_10197746All Organisms → cellular organisms → Bacteria1262Open in IMG/M
3300017972|Ga0187781_10144166All Organisms → cellular organisms → Bacteria1669Open in IMG/M
3300018012|Ga0187810_10077115All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1287Open in IMG/M
3300018085|Ga0187772_11414531All Organisms → cellular organisms → Bacteria → Acidobacteria516Open in IMG/M
3300018431|Ga0066655_10719334All Organisms → cellular organisms → Bacteria → Acidobacteria676Open in IMG/M
3300018482|Ga0066669_10048255All Organisms → cellular organisms → Bacteria → Acidobacteria2670Open in IMG/M
3300020170|Ga0179594_10148141All Organisms → cellular organisms → Bacteria → Acidobacteria867Open in IMG/M
3300020582|Ga0210395_11263210All Organisms → cellular organisms → Bacteria → Acidobacteria541Open in IMG/M
3300021046|Ga0215015_10302174All Organisms → cellular organisms → Bacteria → Acidobacteria553Open in IMG/M
3300021046|Ga0215015_10685307All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium789Open in IMG/M
3300021088|Ga0210404_10653219All Organisms → cellular organisms → Bacteria → Acidobacteria599Open in IMG/M
3300021168|Ga0210406_10424185All Organisms → cellular organisms → Bacteria1062Open in IMG/M
3300021170|Ga0210400_10322472All Organisms → cellular organisms → Bacteria1270Open in IMG/M
3300021178|Ga0210408_10042773All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae3551Open in IMG/M
3300021180|Ga0210396_10077924All Organisms → cellular organisms → Bacteria → Acidobacteria3011Open in IMG/M
3300021180|Ga0210396_10934763All Organisms → cellular organisms → Bacteria → Acidobacteria737Open in IMG/M
3300021401|Ga0210393_11273303All Organisms → cellular organisms → Bacteria → Acidobacteria590Open in IMG/M
3300021406|Ga0210386_10166344All Organisms → cellular organisms → Bacteria → Acidobacteria1852Open in IMG/M
3300021420|Ga0210394_10801376All Organisms → cellular organisms → Bacteria → Acidobacteria823Open in IMG/M
3300021432|Ga0210384_10223659All Organisms → cellular organisms → Bacteria1694Open in IMG/M
3300021559|Ga0210409_11589752All Organisms → cellular organisms → Bacteria → Acidobacteria530Open in IMG/M
3300021560|Ga0126371_11028068All Organisms → cellular organisms → Bacteria965Open in IMG/M
3300024330|Ga0137417_1334933All Organisms → cellular organisms → Bacteria → Acidobacteria4173Open in IMG/M
3300024331|Ga0247668_1094993All Organisms → cellular organisms → Bacteria → Acidobacteria603Open in IMG/M
3300026325|Ga0209152_10272000All Organisms → cellular organisms → Bacteria → Acidobacteria630Open in IMG/M
3300026333|Ga0209158_1058817All Organisms → cellular organisms → Bacteria1546Open in IMG/M
3300026342|Ga0209057_1248318All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium506Open in IMG/M
3300026482|Ga0257172_1085202All Organisms → cellular organisms → Bacteria → Acidobacteria581Open in IMG/M
3300026528|Ga0209378_1059636All Organisms → cellular organisms → Bacteria → Acidobacteria1804Open in IMG/M
3300026540|Ga0209376_1396706All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium516Open in IMG/M
3300026550|Ga0209474_10530097All Organisms → cellular organisms → Bacteria → Acidobacteria597Open in IMG/M
3300026555|Ga0179593_1051332All Organisms → cellular organisms → Bacteria → Acidobacteria2005Open in IMG/M
3300026555|Ga0179593_1104817All Organisms → cellular organisms → Bacteria1398Open in IMG/M
3300026557|Ga0179587_10110908All Organisms → cellular organisms → Bacteria1671Open in IMG/M
3300026557|Ga0179587_10752822All Organisms → cellular organisms → Bacteria → Acidobacteria642Open in IMG/M
3300027562|Ga0209735_1047579All Organisms → cellular organisms → Bacteria → Acidobacteria916Open in IMG/M
3300027795|Ga0209139_10024039All Organisms → cellular organisms → Bacteria2183Open in IMG/M
3300027862|Ga0209701_10524548All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium640Open in IMG/M
3300027869|Ga0209579_10471061All Organisms → cellular organisms → Bacteria → Acidobacteria682Open in IMG/M
3300027903|Ga0209488_11180274All Organisms → cellular organisms → Bacteria → Acidobacteria517Open in IMG/M
3300027908|Ga0209006_10541891All Organisms → cellular organisms → Bacteria → Acidobacteria967Open in IMG/M
3300027911|Ga0209698_11299745All Organisms → cellular organisms → Bacteria → Acidobacteria533Open in IMG/M
3300028906|Ga0308309_10786176All Organisms → cellular organisms → Bacteria → Acidobacteria827Open in IMG/M
3300028906|Ga0308309_11068894All Organisms → cellular organisms → Bacteria → Acidobacteria698Open in IMG/M
3300031231|Ga0170824_120806370All Organisms → cellular organisms → Bacteria → Acidobacteria6953Open in IMG/M
3300031708|Ga0310686_114609133All Organisms → cellular organisms → Bacteria1712Open in IMG/M
3300031708|Ga0310686_114692865All Organisms → cellular organisms → Bacteria → Acidobacteria711Open in IMG/M
3300031720|Ga0307469_10547630All Organisms → cellular organisms → Bacteria1024Open in IMG/M
3300031720|Ga0307469_12101427All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium549Open in IMG/M
3300031753|Ga0307477_10182557All Organisms → cellular organisms → Bacteria1462Open in IMG/M
3300031823|Ga0307478_10210706All Organisms → cellular organisms → Bacteria1567Open in IMG/M
3300031823|Ga0307478_10888774All Organisms → cellular organisms → Bacteria → Acidobacteria745Open in IMG/M
3300031947|Ga0310909_11379998All Organisms → cellular organisms → Bacteria → Acidobacteria564Open in IMG/M
3300031962|Ga0307479_10197548All Organisms → cellular organisms → Bacteria1981Open in IMG/M
3300031962|Ga0307479_11277790All Organisms → cellular organisms → Bacteria → Acidobacteria695Open in IMG/M
3300032160|Ga0311301_10043905All Organisms → cellular organisms → Bacteria10604Open in IMG/M
3300032174|Ga0307470_10824426All Organisms → cellular organisms → Bacteria → Acidobacteria721Open in IMG/M
3300032782|Ga0335082_10081319All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia3254Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil35.56%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil13.33%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil11.11%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil5.93%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil4.44%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil3.70%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil3.70%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds2.22%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland2.22%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil2.22%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.96%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil1.48%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment1.48%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil1.48%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.48%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands0.74%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring0.74%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil0.74%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.74%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost0.74%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.74%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.74%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.74%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.74%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300002908Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cmEnvironmentalOpen in IMG/M
3300002914Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cmEnvironmentalOpen in IMG/M
3300003367Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005343Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005541Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1EnvironmentalOpen in IMG/M
3300005554Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110EnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005566Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142EnvironmentalOpen in IMG/M
3300005586Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140EnvironmentalOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300005921Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6EnvironmentalOpen in IMG/M
3300006050Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014EnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300006354Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012EnvironmentalOpen in IMG/M
3300006791Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102EnvironmentalOpen in IMG/M
3300006794Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107EnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006893Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaGEnvironmentalOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010337Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012964Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaGEnvironmentalOpen in IMG/M
3300013832Permafrost microbial communities from Nunavut, Canada - A3_5cm_0MEnvironmentalOpen in IMG/M
3300014157Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300015052Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015053Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300017936Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1EnvironmentalOpen in IMG/M
3300017966Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MGEnvironmentalOpen in IMG/M
3300017972Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300018012Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5EnvironmentalOpen in IMG/M
3300018085Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300020170Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300020582Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-OEnvironmentalOpen in IMG/M
3300021046Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depthEnvironmentalOpen in IMG/M
3300021088Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-MEnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300021180Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-OEnvironmentalOpen in IMG/M
3300021401Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-OEnvironmentalOpen in IMG/M
3300021406Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-OEnvironmentalOpen in IMG/M
3300021420Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-MEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300024330Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300024331Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK09EnvironmentalOpen in IMG/M
3300026325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)EnvironmentalOpen in IMG/M
3300026333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)EnvironmentalOpen in IMG/M
3300026342Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)EnvironmentalOpen in IMG/M
3300026482Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-BEnvironmentalOpen in IMG/M
3300026528Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)EnvironmentalOpen in IMG/M
3300026540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)EnvironmentalOpen in IMG/M
3300026550Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)EnvironmentalOpen in IMG/M
3300026555Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300026557Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungalEnvironmentalOpen in IMG/M
3300027562Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027795Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)EnvironmentalOpen in IMG/M
3300027862Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027869Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300027908Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027911Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031753Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515EnvironmentalOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300031947Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000HEnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032782Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI1027J12803_10631427013300000955SoilAVEISSIIVEDRAELDRMAPRVADAIARGAAAFKPSYVVANVPGTLP*
JGI25382J43887_1013333113300002908Grasslands SoilVEDRADLDRMAPGVADAIARGAAAFRPSYVVPSAPGALP*
JGI25617J43924_1000158983300002914Grasslands SoilAAPAIAVEISSVTVDDRADLDRMAPGVADAIARGVAAFKPSYVVPNTPGALP*
JGI26338J50219_101459813300003367Bog Forest SoilPAIAVEISSVVVEDRADLDRMAPGVADAIATGIAQFRPSYVVASTAGGTP*
Ga0062593_10265825513300004114SoilAIAVEVSSVAVDDRGQLDRMAPGVADAIARGASAFRPSYVVATNPGERP*
Ga0066685_1096508813300005180SoilVEDRADLDRMAPGVADAIARGAAAFKPSYVVPSAPGALP*
Ga0070687_10047808923300005343Switchgrass RhizosphereEVSSVAVDDRGQLDRMAPGVADAIARGASAFRPSYVVATNPGERP*
Ga0070699_10013338013300005518Corn, Switchgrass And Miscanthus RhizosphereAIAVEISSVVVENRADLDRMAPGVADAIATGVATFRPSYVVPTPAGGTP*
Ga0070733_1045221013300005541Surface SoilAIAVEISSVVVEDRADLDRMVPGVADAIATGVAAFRPSYVLPTATGGTQ*
Ga0066661_1003177413300005554SoilVTVEDRADLDRMAPGVADAIARGAAAFRPSYVVPSAPGALP*
Ga0066692_1066754113300005555SoilAVEISSVTVEDRAELDRMAPGVADAIARGAAAFKPSYVVPNISAGRP*
Ga0066699_1017668333300005561SoilVTVEDRADLDRMAPGVADAIARGAAAFKPSYVVPSAPGALP*
Ga0066693_1038225523300005566SoilSVTVEDRADLDRMAPGVADAIARGAAAFKPSYVVPSTPGALP*
Ga0066691_1003090613300005586SoilSVTVENRADLDRMAPGVADAIARGVAAFKPSYVVASTSGAPR*
Ga0066706_1087465213300005598SoilVEVSSVTVEDRADLDRMAPGVADAIARGAAAFKPSYVVPSTPGALP*
Ga0070766_1114346713300005921SoilVENRADLDRMAPGVADAIATGAVAFRPSYVVPTTTGGTP*
Ga0075028_10106225913300006050WatershedsIAVEISSVTVDDRADLDRMAPGLADAIARGAVAFKPSYIVPSTPGALP*
Ga0070765_10063003313300006176SoilEDRADLDRMAPGVADSIATGVAAFRPSYVVATTGGTP*
Ga0070765_10095377713300006176SoilAPAIAVEISSVVVENRADLDRMAPGVADAIATGVASFRPSYVVPTTAGAAP*
Ga0075021_1056176913300006354WatershedsRGALDRMAPGVADAIARGATAFRPSYVVATNPGERP*
Ga0066653_1063386413300006791SoilVEVSSVTVEDRADLDRMAPGVADAIARGSAAFKPSYVVPSTPGALP*
Ga0066658_1006230033300006794SoilSSVTVEDRADLDRMAPGVADAIARGATTFKPSYVIPTSPGALP*
Ga0066665_1033429633300006796SoilEVSSVTVEDRADLDRMAPGVADAIARGTAAFKPSYVVPSAPGALP*
Ga0066665_1090319513300006796SoilSVTVEDRADLDRMAPGVADAIVRGAAAFKPSYVVPTVTGGLR*
Ga0073928_1094709323300006893Iron-Sulfur Acid SpringVSVDDRGDLDRMAPGVADAIARGASAFRPAYVVPANPGERP*
Ga0099791_1024513413300007255Vadose Zone SoilAPAIAVEISSIVVEDRAELDHMAPGVADAIAHGAAAFKPSYVVANVPGTLP*
Ga0099793_10001158103300007258Vadose Zone SoilVEDRAELDRMAPGVADAIARGAAAFKPSYVVPTTPGALR*
Ga0099793_1025808013300007258Vadose Zone SoilTVEDRADLDRMAPGVADAIARGAAAFKPSYVVPNTRGALP*
Ga0099793_1026048823300007258Vadose Zone SoilVTVEDRADLDRMAPGVADAIARGAAAFKPSYVVPNTRGALP*
Ga0066710_10001162313300009012Grasslands SoilAIAVEVSSVTVEDRADLDRMAPGVADAIARGAAAFRPSYVVPSAPGALP
Ga0066710_10026507853300009012Grasslands SoilVEDRADLDRMAPGVADAIARGAAAFKPSYVVPSTPGALP
Ga0099829_1084368423300009038Vadose Zone SoilTVENRADLDRMAPGVADAIARGAAAFKPSYVVPTVTGGLR*
Ga0099830_1035957133300009088Vadose Zone SoilVTVEDRADLDRMAPGVADAIARGAAAFKPSYVVPNTPGAMP*
Ga0099830_1036280813300009088Vadose Zone SoilAVEISSVTVEDRADLDRMAPGVADAIARGAAAFKPSYVVPNTPGALP*
Ga0099830_1113725713300009088Vadose Zone SoilSSVTVNDRADLDRMAPVVAEAITRGVTAFRPSYVVPSTPGALP*
Ga0099830_1172079823300009088Vadose Zone SoilEISSVTVEDRADLDRMAPGVADAIARGVAAFKPSYVVPTTPGALP*
Ga0099828_1120147613300009089Vadose Zone SoilRAQIDHMAPGVADAIARGAAAFRPTYVVPANPGERP*
Ga0099828_1151761023300009089Vadose Zone SoilDRAQLDRMAPGVADAIARGAAAFKPTYVVPNVPGGLP*
Ga0099792_1067931613300009143Vadose Zone SoilSIVVEDRAELDRMGPGVADAIARGAAAFKPSYVVANVPGTLP*
Ga0126373_1271068613300010048Tropical Forest SoilTAAPAIAVEVSSVTVENRNDLDRMAPGVADAVAKGVAAFRPIYVVAGTVGVRP*
Ga0134062_1006312233300010337Grasslands SoilDRAELDHMVPGVADAIARGVAAFKPLYAMALPSGALP*
Ga0126376_1218572723300010359Tropical Forest SoilAVEISSVTVNDRADLDRMAPGVAEAIARGVAAFKPSYVVPNVPGVLP*
Ga0126378_1319895223300010361Tropical Forest SoilAIAVEVSSVIVENRNDLDRMAPGVADAIAKGVAAFRPSYVVAGTVGARP*
Ga0126379_1023781313300010366Tropical Forest SoilNDRADLDRMAAGVADAIARGTVAFKPSYVISNTPGALL*
Ga0150983_1269958933300011120Forest SoilVNDRADLDRMAPGVADAIARGVAAFKPSYVVPNTTGALP*
Ga0137391_1096036113300011270Vadose Zone SoilVTVEDRADLDRMAPGVADAIARGAAAFKPSYVVPNTPGALP*
Ga0137393_1037390813300011271Vadose Zone SoilISSVTVENRADLDRMAPGVADAIARGAAAFKPSYVVSNTPGALP*
Ga0137389_1036175313300012096Vadose Zone SoilAPAIAVEISSVTVEDRADLDRMAPGVADAIARGAAAFKPSYVVPNTRGALP*
Ga0137389_1057279713300012096Vadose Zone SoilELDRMAPGVADAIARGAAAFKPSYIVPKTPGALP*
Ga0137364_1063188223300012198Vadose Zone SoilEVSSVTVEDRADLDRMAPGVADAIARGTAAFKPSYVVPSTPGALP*
Ga0137382_1092665713300012200Vadose Zone SoilDLDRMAPGVADAIARGAAAFKPSYVVPNTRGALP*
Ga0137363_1025124333300012202Vadose Zone SoilSVTVEDRADLDRMAPGVADAIARGAAAFKPSYVVPNTRGALP*
Ga0137363_1036981113300012202Vadose Zone SoilIAVEISSVTVEDRADLDHMAPGVADAIARGAAAFKPSYVVPTVTGGLR*
Ga0137363_1105694013300012202Vadose Zone SoilDRAQLDHMAPGVAGAIARGAAAFRPTYVVPANPGERP*
Ga0137363_1167426513300012202Vadose Zone SoilAELDHMAPGVADAIARGAAAFRPSYVVPANPGERP*
Ga0137399_1061076113300012203Vadose Zone SoilRADLDRMAPEVADAIARGAAAFKPSYVVPTASGALP*
Ga0137376_1082223523300012208Vadose Zone SoilVEISSVTVEDRTDLDRMAPGVADAIARGAAAFKPSYVVPNTRGALP*
Ga0137370_1029908933300012285Vadose Zone SoilDLDHMAPGVADAVARGVVAFKPSYVMASTGGALP*
Ga0137386_1108301613300012351Vadose Zone SoilISSVTVDDRADLDRMAPGVADAIARGAAAFKPSYVVPNTPGALP*
Ga0137371_1020640933300012356Vadose Zone SoilTVDDRAQLDRMAPGVADAIARGTAAFKPTYIVPNVPGGLP*
Ga0137360_1022471733300012361Vadose Zone SoilVSSVTVEDRADLDRMAPGVADAIARGAAAFRPSYVVPTTPGALP*
Ga0137361_1065343913300012362Vadose Zone SoilPAIAVEISSVTVEDRADLDRMAPGVADAIARGAAAFKPTYVVPNSPGALP*
Ga0137358_1054989023300012582Vadose Zone SoilVEDRADLDRMAPGVADAIARGAAAFKPSYVVPNTCGALP*
Ga0137396_1037632113300012918Vadose Zone SoilVEISSVTVENRADLDRMAPGVADAIARGAAAFKPSYVVPTASGALP*
Ga0137394_1050700113300012922Vadose Zone SoilSVTVEDRAQLDHMAPGVADAVARGAAAFRPTYVVPANPGERP*
Ga0137394_1067541923300012922Vadose Zone SoilIVVEDRAELDHMAPGVADAIAHGAAAFKPSYVVANVPGTLP*
Ga0137394_1143195913300012922Vadose Zone SoilISSIVVEDRAELDHMAPGVADAIAHGAAAFKPSYVVANVPGTLP*
Ga0137416_1007680753300012927Vadose Zone SoilDRADLDRMAPGVADAIARGAAAFRPSYVVPTTPGTLP*
Ga0137410_1144983613300012944Vadose Zone SoilSIVVEDRAELDHMAPGVADAIAHGAAAFKPSYVVANVPGTLP*
Ga0153916_1265641013300012964Freshwater WetlandsIAVEISSVTVNDRADLDRMAQGVGEAIAGGAAAFKPSYVVPSVAGALP*
Ga0120132_115491413300013832PermafrostSISVGDPGELDRMAPGIADAIARGVAAFKPSYLIPAIDGTPQ*
Ga0134078_1020918823300014157Grasslands SoilADLDRMAPGVADAIARGAAAFKPSYVVPNTRGALP*
Ga0137411_103573213300015052Vadose Zone SoilSSIVVEDRVVEDRLELDRMAPGVADAIARGAAAFKPSYVVPNVPGALP*
Ga0137411_109950913300015052Vadose Zone SoilRSPVVTVEDRADLDRMAPGVADAIARGAAAFKPSYVVAKTPGALP*
Ga0137411_109951033300015052Vadose Zone SoilISSVTVEDRADLDRMAPGVADAIARGAAAFKPSYVVAKTPGALP*
Ga0137405_140401513300015053Vadose Zone SoilEISSVTVENRNDLDRMAPGVADAIAKGVAAFKPSYVVAERLG*
Ga0187821_1004838933300017936Freshwater SedimentVENRAALDQMAPGVADAIATGVAAFRPSYVVPTATGGTP
Ga0187776_1019774633300017966Tropical PeatlandADLDRMASGVADAIARGVTGFKPLYVIPSVTGAQP
Ga0187781_1014416613300017972Tropical PeatlandIAVEISSVVVNDRTDLDRMAPGVADAIARGVAAFKPMYVVPSLAGVQP
Ga0187810_1007711513300018012Freshwater SedimentTAAPAIAVEVSSVTVDDRATLERMAPGVADAIARGVAAFRPVYEASPAAGALP
Ga0187772_1141453113300018085Tropical PeatlandDLDRMAPGVADAIATGVAMFRPSYVVPVNSSGGTP
Ga0066655_1071933413300018431Grasslands SoilVEDRADLDRMAPGVADAIARGTAAFKPSYVVPSTPGALP
Ga0066669_1004825513300018482Grasslands SoilVTVEDRADLDRMAPGVADAIARGATTFKPSYVIPSSPGALP
Ga0179594_1014814123300020170Vadose Zone SoilAPAIAVEISSIVVEDRAELDRMAPGVADAIARGAAAFKPSYVVANVPGTLP
Ga0210395_1126321013300020582SoilAVEVSSVAVDDRAELDRMAPGVADAIARAVAAFKPTYVVANATGAQP
Ga0215015_1030217423300021046SoilVEDRADLDRMAPGVADAIARGAAAFKPSYVVPSAPGALP
Ga0215015_1068530723300021046SoilAELDRMAPGVAEAITRGVTAFRPSYVVPSTPGGLP
Ga0210404_1065321923300021088SoilVEISSVTVENRNDLDRMAPGVADAIAKGVAAFKPSYVVAGAAGVRR
Ga0210406_1042418533300021168SoilPAIAVEISSVVVEDRADLDRMAPGVADSIATGVAAFRPSYVVPTTGGTP
Ga0210400_1032247213300021170SoilIAVEVSSVTVENRNDLDRMAPGVADAIAKGVAAFKPSYVVAGTAGVKP
Ga0210408_1004277363300021178SoilPAIAVEISSIIVEDRAELDRMGPGIADAIARGAAAFKPSYIVPSAPGALP
Ga0210396_1007792453300021180SoilISSVVVENRADLDRMAPGVADAIPTGVASFRPSYVVPATSGGTP
Ga0210396_1093476323300021180SoilVEISSVAVQDRAEIDRMAPGVADAIARGVAAFKPSYVIPAGPGARP
Ga0210393_1127330323300021401SoilAIAVEISSVSVEDRAELDRMIPGVADAIARGVAEFKPSYVVATPPGGQP
Ga0210386_1016634413300021406SoilIAVEISSVVVEDRADLDRMAPGVAGAIATGVAAFRPSYVVPTAGGAP
Ga0210394_1080137613300021420SoilAVEVSSVSVDDHAELDRMAPGVADAIARGVAAFKPTYVVANATGAQQ
Ga0210384_1022365913300021432SoilPAIAVEVSSVTVEDRAQLDHMAPGVADAIARGAAAFRPSYVVPVNPGERP
Ga0210409_1158975213300021559SoilVEDRANLDRMAPGVADAIARGAAAFKPSYVVPNSPGALP
Ga0126371_1102806833300021560Tropical Forest SoilVIVENRNDLDRMGPGVADAIAKGAAAFRPLYVVAGPAGAQR
Ga0137417_133493363300024330Vadose Zone SoilVTMEDRADLDRMAPGVADAIARGAAAFKPSYVVPSTPGALP
Ga0247668_109499323300024331SoilRGDLNKMMPGVADAIARGLAAFRPSYVVPGDAGAQP
Ga0209152_1027200023300026325SoilVEDRADLDRMAPGVADAIARGAAAFKPAYVVPNSPGALP
Ga0209158_105881733300026333SoilAAPAIAVEISSVTVENRADLDRMAPGVADAIARGVAAFKPSYVVASTSGAPR
Ga0209057_124831813300026342SoilAVEVSSVVVNDRAELDHMVPGVADAIARGVAAFKPLYAMALPSGALP
Ga0257172_108520213300026482SoilVEDRADLDRVAPGVADAIARGAAAFKPSYVVPNSPGALP
Ga0209378_105963643300026528SoilDRTDLDRMAPGVADAIARGAAAFKPSYVVPNTRGALP
Ga0209376_139670613300026540SoilDRADLDRMAPGVADAIARGAAAFKPSYVVPSAPGALP
Ga0209474_1053009713300026550SoilPAIAVEISSVTVEDRADLDRMAPGVADAIARGAAAFKPSYVVPNTRGALP
Ga0179593_105133223300026555Vadose Zone SoilVTVEDRADLDRMAPGVADAIARGAAAFKPSYVVAKTPGALP
Ga0179593_110481733300026555Vadose Zone SoilVEDRADLDRMAPGVADAIARGAAAFRPSYVVPTTPGALP
Ga0179587_1011090813300026557Vadose Zone SoilANLDRMAPGVADAIARGTAAFKPSYVVPNSPGALP
Ga0179587_1075282213300026557Vadose Zone SoilISSVTVEDRAELDRMAPGVADAIARGAAAFRPSYVVAGSPGALP
Ga0209735_104757923300027562Forest SoilPAIAVEVSSVTVEDRAELDHMAPGVADAIARGAAAFRPSYIVPTNPGERP
Ga0209139_1002403943300027795Bog Forest SoilAIAVEISSVVVDDRADLDRMAPGVADAIATGIASFRPSYVIATTAGGTP
Ga0209701_1052454823300027862Vadose Zone SoilTVNDRADLDRMAPVVAEAITRGVTAFRPSYVVPSTPGALP
Ga0209579_1047106113300027869Surface SoilPAIAVEISSVVVEDRADLDRMAPGVADAIAGGVAAFRPSYVVPTMGGGTP
Ga0209488_1118027413300027903Vadose Zone SoilAIAVEISSVTVEERAELDHMAPGVADAIARGAAAFRPSYVVPANPGERP
Ga0209006_1054189133300027908Forest SoilRADLDRMAPGIADAIATGVAAFRPSYVVPTTTGGTP
Ga0209698_1129974523300027911WatershedsVEVSSVTVEDRAALDRMAPGVADAIARGVAAFRPVYEASPAAGALP
Ga0308309_1078617613300028906SoilAPAIAVEISSVVVENRADLDRMAPGVADAIATGVASFRPSYVVPTTAGAAP
Ga0308309_1106889413300028906SoilAIAVEISSVVIEDRADLDRMAPGVADSIATGVAAFRPSYVVATTGGTP
Ga0170824_12080637083300031231Forest SoilELASVSVQDRADLDRMMPGVGDAIARGVAEFRPSYVVPGAAGAHP
Ga0310686_11460913333300031708SoilVVVEDRADLDRMAPGVADAIATGIAAFRPSYVVPTNGGTP
Ga0310686_11469286523300031708SoilAAPAIAVEISSVVVENRADLDRMGPGVADAIATGVAAFRPSYVVPTTSGGTP
Ga0307469_1054763013300031720Hardwood Forest SoilRAELDRMAPGVADAIAHGVAAFKPSYIVPNSAGALP
Ga0307469_1210142713300031720Hardwood Forest SoilSIIVEDRAELDRMGPGIADAIARGAAAFKPSYIVPGAPGALP
Ga0307477_1018255713300031753Hardwood Forest SoilSVTVDDRAALERMAPGVADAIARGVAAFRPIYEASPAAGALP
Ga0307478_1021070633300031823Hardwood Forest SoilVVEDRVDLDRMAPGVADAIATGVAAFRPSYVVPTTAGGTP
Ga0307478_1088877413300031823Hardwood Forest SoilDRADLDRMAPGVADAIAGGVAAFRPSYVVPTMGGGTP
Ga0310909_1137999813300031947SoilTVENRNDLDRMAPGVAEAIAKGVAAFRPSYVVAGTIGARP
Ga0307479_1019754813300031962Hardwood Forest SoilIAVEVSSVTVEDRAQLDHMAPGVADAIARGAAAFRPSYVVPVNPGERP
Ga0307479_1127779013300031962Hardwood Forest SoilAIAVEVSSVAVDDRGQLDRMAPGVADAIARGASAFRPSYVVATNPGERP
Ga0311301_1004390553300032160Peatlands SoilVTVEDRADLDRMAPGVADAIARGAAAFKPSYVVPAASGALP
Ga0307470_1082442623300032174Hardwood Forest SoilEVSSVTVEDRAELDHMAPGVADAIARGAAAFRPSYIVPTNPGERP
Ga0335082_1008131963300032782SoilAVEISSVSVQNRADLESMVPGVADAIARGVAAFRPSYVLPSSPVLGGSAQP

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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