Metagenome / Metatranscriptome Family F058333

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F058333
Family Type	Metagenome / Metatranscriptome
Number of Sequences	135
Average Sequence Length	101 residues
Representative Sequence	RLAPQFAAGFTAGYFSKQRDHYAFQSPQDSVALATRMGFPTPASVLDEGTGQRWLRLGFAVTYHTPGVEGGFSIEQTVSGAGLVPGATVYRLVLRATRKLF
Number of Associated Samples	105
Number of Associated Scaffolds	134

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.61 %
% of genes near scaffold ends (potentially truncated)	88.15 %
% of genes from short scaffolds (< 2000 bps)	77.04 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.50

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (91.852 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (47.407 % of family members)
Environment Ontology (ENVO)	Unclassified (68.148 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (74.074 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 11.63% β-sheet: 42.64% Coil/Unstructured: 45.74%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.50
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.50
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 134 Family Scaffolds
PF02463	SMC_N	8.96
PF01513	NAD_kinase	3.73
PF00348	polyprenyl_synt	2.24
PF13742	tRNA_anti_2	0.75
PF13292	DXP_synthase_N	0.75
PF02780	Transketolase_C	0.75

COG ID	Name	Functional Category	% Frequency in 134 Family Scaffolds
COG0142	Geranylgeranyl pyrophosphate synthase	Coenzyme transport and metabolism [H]	2.24

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	91.85 %
Unclassified	root	N/A	8.15 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	91.85 %
Unclassified	root	N/A	8.15 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	91.85 %
Unclassified	root	N/A	8.15 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	87.41 %
Unclassified	root	N/A	8.15 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.74 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	87.41 %
Unclassified	root	N/A	8.15 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.74 %

Name	Rank	Taxonomy	Distribution
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	61.48 %
Unclassified	root	N/A	8.15 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	4.44 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.74 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	61.48 %
Unclassified	root	N/A	8.15 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	4.44 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.74 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	61.48 %
Unclassified	root	N/A	8.15 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	4.44 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.74 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	61.48 %
Unclassified	root	N/A	8.15 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	2.96 %
Gemmatimonas	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas	1.48 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.74 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	61.48 %
Unclassified	root	N/A	8.15 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2.96 %
Gemmatimonas aurantiaca	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	1.48 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.74 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002557\|JGI25381J37097_1002146	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	3239	Open in IMG/M
3300002561\|JGI25384J37096_10024590	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	2347	Open in IMG/M
3300002561\|JGI25384J37096_10206817	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	576	Open in IMG/M
3300002562\|JGI25382J37095_10177746	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	659	Open in IMG/M
3300002908\|JGI25382J43887_10184454	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1021	Open in IMG/M
3300002912\|JGI25386J43895_10116814	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	662	Open in IMG/M
3300002915\|JGI25387J43893_1074727	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	507	Open in IMG/M
3300005167\|Ga0066672_10016216	All Organisms → cellular organisms → Bacteria	3782	Open in IMG/M
3300005171\|Ga0066677_10054089	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2016	Open in IMG/M
3300005171\|Ga0066677_10485209	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	709	Open in IMG/M
3300005172\|Ga0066683_10235029	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1135	Open in IMG/M
3300005172\|Ga0066683_10599744	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	667	Open in IMG/M
3300005174\|Ga0066680_10353463	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	937	Open in IMG/M
3300005174\|Ga0066680_10776357	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	579	Open in IMG/M
3300005174\|Ga0066680_10887039	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	530	Open in IMG/M
3300005176\|Ga0066679_11000852	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	520	Open in IMG/M
3300005177\|Ga0066690_10165589	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1459	Open in IMG/M
3300005179\|Ga0066684_10273653	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1115	Open in IMG/M
3300005181\|Ga0066678_10080305	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1933	Open in IMG/M
3300005181\|Ga0066678_10705600	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300005181\|Ga0066678_10765435	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	640	Open in IMG/M
3300005181\|Ga0066678_10908448	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	576	Open in IMG/M
3300005184\|Ga0066671_10891262	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	564	Open in IMG/M
3300005187\|Ga0066675_10254393	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1256	Open in IMG/M
3300005434\|Ga0070709_11582084	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	533	Open in IMG/M
3300005446\|Ga0066686_10130255	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1648	Open in IMG/M
3300005446\|Ga0066686_10217622	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1283	Open in IMG/M
3300005446\|Ga0066686_10999185	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	543	Open in IMG/M
3300005447\|Ga0066689_10661262	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	656	Open in IMG/M
3300005450\|Ga0066682_10048452	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2570	Open in IMG/M
3300005450\|Ga0066682_10879367	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	535	Open in IMG/M
3300005451\|Ga0066681_10772100	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	581	Open in IMG/M
3300005467\|Ga0070706_100039589	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	4351	Open in IMG/M
3300005518\|Ga0070699_100022238	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	5463	Open in IMG/M
3300005536\|Ga0070697_101065614	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	719	Open in IMG/M
3300005540\|Ga0066697_10665444	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	572	Open in IMG/M
3300005553\|Ga0066695_10174933	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1342	Open in IMG/M
3300005553\|Ga0066695_10541194	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	709	Open in IMG/M
3300005554\|Ga0066661_10035095	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2796	Open in IMG/M
3300005557\|Ga0066704_10606241	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	703	Open in IMG/M
3300005558\|Ga0066698_10112397	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1808	Open in IMG/M
3300005558\|Ga0066698_10363095	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	999	Open in IMG/M
3300005558\|Ga0066698_10948419	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	548	Open in IMG/M
3300005559\|Ga0066700_10112577	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1800	Open in IMG/M
3300005566\|Ga0066693_10218531	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	747	Open in IMG/M
3300005576\|Ga0066708_10170711	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1349	Open in IMG/M
3300005586\|Ga0066691_10954410	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	504	Open in IMG/M
3300005598\|Ga0066706_10093611	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2165	Open in IMG/M
3300005888\|Ga0075289_1095672	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	501	Open in IMG/M
3300006034\|Ga0066656_10007574	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	5319	Open in IMG/M
3300006175\|Ga0070712_101614375	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	567	Open in IMG/M
3300006797\|Ga0066659_10145965	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1676	Open in IMG/M
3300006804\|Ga0079221_10286177	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	958	Open in IMG/M
3300006804\|Ga0079221_10366026	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	878	Open in IMG/M
3300006852\|Ga0075433_10384234	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1239	Open in IMG/M
3300006903\|Ga0075426_10773627	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	721	Open in IMG/M
3300007265\|Ga0099794_10338110	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	782	Open in IMG/M
3300009012\|Ga0066710_100629740	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1630	Open in IMG/M
3300009012\|Ga0066710_102602752	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	727	Open in IMG/M
3300009090\|Ga0099827_11935733	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	513	Open in IMG/M
3300010111\|Ga0127491_1061945	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	667	Open in IMG/M
3300010132\|Ga0127455_1036131	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	615	Open in IMG/M
3300010304\|Ga0134088_10501754	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	598	Open in IMG/M
3300010325\|Ga0134064_10196230	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	722	Open in IMG/M
3300010329\|Ga0134111_10346385	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	627	Open in IMG/M
3300010329\|Ga0134111_10358227	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	618	Open in IMG/M
3300010329\|Ga0134111_10420885	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	575	Open in IMG/M
3300010401\|Ga0134121_10676499	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	976	Open in IMG/M
3300012189\|Ga0137388_10153645	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2041	Open in IMG/M
3300012201\|Ga0137365_10442165	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	957	Open in IMG/M
3300012207\|Ga0137381_11494914	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	567	Open in IMG/M
3300012349\|Ga0137387_10129761	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1782	Open in IMG/M
3300012356\|Ga0137371_10190715	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1606	Open in IMG/M
3300012362\|Ga0137361_11276339	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	658	Open in IMG/M
3300012532\|Ga0137373_10764406	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	716	Open in IMG/M
3300012683\|Ga0137398_10030583	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	3043	Open in IMG/M
3300012975\|Ga0134110_10236668	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	774	Open in IMG/M
3300012977\|Ga0134087_10389756	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	676	Open in IMG/M
3300014154\|Ga0134075_10263279	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	747	Open in IMG/M
3300014157\|Ga0134078_10211516	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	796	Open in IMG/M
3300015053\|Ga0137405_1323118	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	3905	Open in IMG/M
3300015054\|Ga0137420_1405508	All Organisms → cellular organisms → Bacteria	5274	Open in IMG/M
3300015054\|Ga0137420_1405508	All Organisms → cellular organisms → Bacteria	5274	Open in IMG/M
3300015359\|Ga0134085_10530273	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	541	Open in IMG/M
3300018071\|Ga0184618_10195380	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	844	Open in IMG/M
3300018433\|Ga0066667_11571095	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	584	Open in IMG/M
3300018468\|Ga0066662_10009772	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	4939	Open in IMG/M
3300021088\|Ga0210404_10789651	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	542	Open in IMG/M
3300025906\|Ga0207699_11250790	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	549	Open in IMG/M
3300025915\|Ga0207693_11314789	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	540	Open in IMG/M
3300026296\|Ga0209235_1122330	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1089	Open in IMG/M
3300026300\|Ga0209027_1061321	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1402	Open in IMG/M
3300026307\|Ga0209469_1027426	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1941	Open in IMG/M
3300026309\|Ga0209055_1169698	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	689	Open in IMG/M
3300026309\|Ga0209055_1305480	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	502	Open in IMG/M
3300026312\|Ga0209153_1282940	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	530	Open in IMG/M
3300026314\|Ga0209268_1192116	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	506	Open in IMG/M
3300026317\|Ga0209154_1093222	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1289	Open in IMG/M
3300026317\|Ga0209154_1255591	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	602	Open in IMG/M
3300026319\|Ga0209647_1163322	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	902	Open in IMG/M
3300026326\|Ga0209801_1242771	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	691	Open in IMG/M
3300026327\|Ga0209266_1161170	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	890	Open in IMG/M
3300026328\|Ga0209802_1313091	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	519	Open in IMG/M
3300026332\|Ga0209803_1009234	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	5328	Open in IMG/M
3300026335\|Ga0209804_1106824	All Organisms → cellular organisms → Bacteria	1282	Open in IMG/M
3300026335\|Ga0209804_1343152	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	502	Open in IMG/M
3300026507\|Ga0257165_1043983	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	797	Open in IMG/M
3300026523\|Ga0209808_1133961	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	991	Open in IMG/M
3300026536\|Ga0209058_1070634	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1873	Open in IMG/M
3300026536\|Ga0209058_1186215	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	894	Open in IMG/M
3300026537\|Ga0209157_1311906	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	573	Open in IMG/M
3300026538\|Ga0209056_10092814	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2494	Open in IMG/M
3300026550\|Ga0209474_10409485	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	703	Open in IMG/M
3300027681\|Ga0208991_1232605	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	527	Open in IMG/M
3300027875\|Ga0209283_10042837	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2858	Open in IMG/M
3300027882\|Ga0209590_10063298	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2105	Open in IMG/M
3300027882\|Ga0209590_10483851	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	800	Open in IMG/M
3300031720\|Ga0307469_11956579	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	568	Open in IMG/M
3300031720\|Ga0307469_12084833	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	551	Open in IMG/M
3300031740\|Ga0307468_100338305	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1115	Open in IMG/M
3300031962\|Ga0307479_10872691	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	873	Open in IMG/M
3300032180\|Ga0307471_102803838	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	619	Open in IMG/M
3300032180\|Ga0307471_103724895	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	539	Open in IMG/M
3300032205\|Ga0307472_100485896	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1060	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.52%
Host-Associated	Host-Associated	1.48%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.78%
Plants	Host-Associated → Plants	1.48%
Aquatic	Environmental → Aquatic	0.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.78%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.48%
Sediment	Environmental → Aquatic → Sediment	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	88.89%
Loam	Environmental → Terrestrial → Soil → Loam	8.15%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.48%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.74%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.74%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	59.26%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.48%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.93%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.48%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.48%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.74%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.74%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	47.41%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.85%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	11.85%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	8.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.93%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.19%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.48%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.48%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.48%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.74%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.74%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.74%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.74%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002912	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm	Environmental	Open in IMG/M
3300002915	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005888	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_103	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300010111	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010132	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026307	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026314	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026507	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-B	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027681	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25381J37097_10021461	3300002557	Grasslands Soil	RDRYAFQSSQDSTALASRLGVPTAASVLDAGTSERRLRLGFALTYHGPMVEGGFSIEQTVSGGPLVPGATVYRLVMRTSRRLF*
JGI25384J37096_100245903	3300002561	Grasslands Soil	VPAAATADLRWDPGDYVGVDVAPLVRLAPEFAAGFTAGYFSKARDHYAFQSPQDSVALATRLGFPTAASVLDQGTAQRWLRLGFAVTYHVPGVEGGFSIEQTVSGAGLVPGATVYRLVLRATRKLF*
JGI25384J37096_102068172	3300002561	Grasslands Soil	RLAPEFAVGFTAGYFSKQRDHYAFQSPQDSVALATRMGFATPASVLDAGTGQRWLRLGFAVTYHTPGVEGGFSIEQTVSGAGLVPGATIYRLVLRATRKLF*
JGI25382J37095_101777462	3300002562	Grasslands Soil	YVGVDVAPLVRLAPEFAVGFTAGYFSKQRDHYAFQSPQDSLALATRMGFATPASVLDAGTGQRWLRLGFAMTYHTPGVEGGFSIEQTVSGAGLVPAVTIYRLVLRATRKLF*
JGI25382J43887_101844542	3300002908	Grasslands Soil	VPSAATTALRWDPGDYLGVDVAPLVRLAPQLAAGFTAGYWTKARDHYTFQSPQDSIDLATRLGIPTPASVLDAGTSQRWLRLGFTLSYVGKTVEGGFSIEQTVTGAGVVPAATLYRIVFRTSRKLF*
JGI25386J43895_101168142	3300002912	Grasslands Soil	AGYFSKARDHYAFQSPQDSVELATRLGLPTPASVLDQGTSQRWLRLGFAVTYHAGHVEGGFSIEQTVSGAGLVPGATVYRLVLRATRRLF*
JGI25387J43893_10747272	3300002915	Grasslands Soil	KGRDRYAFQSSQDSTALASRLGVPTAASVLDAGTSERWLRLGFALTYHGATVEGGFSIEQTVSGGPLVPGATVYRLVMRTSRKLF*
Ga0066672_100162161	3300005167	Soil	RLAPEFAAGFTAGYFSKARDHYAFLSSQDSVDLATRLGVPTAASVLDAGTAQRSLRLGFAVTYHAPNVEGGFSIEQTVSGAGLVPGVTVYRLVLRTTRKLF*
Ga0066677_100540891	3300005171	Soil	APLVRLAPEFAAGVTAGYFSKARDHYAFQSLQDSVALAARLGLPTPASVLDQGTSQRWLRLGFAATYHARNVEGGFSIEQTVSGAGLVPGATVYRLVLRATRKLF*
Ga0066677_104852092	3300005171	Soil	PVAATASLRWDPGDYVGVDVAPLVRLAPEFAAGFTAGYWTKQQDRYAFQSPQDSIALATRLGAPTAASVLDQGTSEHRLRLGFAMTYHGAMVEGGFSIEQTVSGGGFVPGATVYRLVMRTSRRLF*
Ga0066683_102350291	3300005172	Soil	YFTQASDHYAYQSAQDSVALAARMGAPTAASALDQGTSQRRVRLGFAATYHTPTVEGGFSIEQTVSGAGLVLGATLYRIVLRVSRKLF*
Ga0066683_105997441	3300005172	Soil	GVDVAPLVRLAPEFAAGVTAGYFSKERDHYAFQSSQDSIALTTRMGFATPASVLDQGTAQRWLRLGFAVTYHVPGVEGGFSIEQTVSGAGLVPGATVYRLVLRATRKLF*
Ga0066680_103534631	3300005174	Soil	SKERDHYAFQSSQDSVALATRMGFATPASVLDQGTAQRWVRLGFAVTYHVPGVEGGFSIEQTVSGAGLVPGATVYRLVLRATRKLF*
Ga0066680_107763571	3300005174	Soil	SAATTALRWDPGDYLGVDVAPLVRLAPQLAAGFTAGYWTKARDHYTFQSPQDSIDLATRLGIPTPASVLDPGTSQRWLRLGFALSYVGKTVEGGFSIEQTVTGAGVVPAATLYRIVFRTSRKLF*
Ga0066680_108870391	3300005174	Soil	DYVGVDVAPLVRLAPEFAVGFTAGYWTKQRDRYAFQSPQDSVALATRLGAPIAASVLDEGTSQRRLRLGFAMTYHGATVEGGFSIEQTVSGVGGFVPAATVYRLVLRTSRKLF*
Ga0066679_110008522	3300005176	Soil	GDYVGVDVAPLVRLAPEFAAGFTAGYWTKQQDRYAFQSPQDSLALATRLGAPTAAGVLDQGTAEHRLRLGFAMTYHGATVEGGFSIEQTVSGGGFVPGATVYRLVMRTSRRLF*
Ga0066690_101655891	3300005177	Soil	GDYVGVDVAPLVRLAPEFAAGFTAGYWTKQQDRYAFQSPQDSMALATRLGAPTAAGVLDQGTAEHRLRLGFAMTYHGATVEGGFSIEQTVSGGGFVPGATVYRLVMRTSRRLF*
Ga0066690_103992851	3300005177	Soil	YAFQSLQDSVALAARLGLPTPASVLDQGTSQRWLRLGFAATYHARNVEGGFSIEQTVSGAGLVPGATVYRLVLRATRKLF*
Ga0066688_100839051	3300005178	Soil	FLSSQDSVDLATRLGVPTAASVLDAGTAQRSLRLGFAVTYHAPNVEGGFSIEQTVSGAGLVPGVTLYRLVLRTTRKLF*
Ga0066688_109466661	3300005178	Soil	STDLATRLGAPTSASVLDQGTSERRLQLGVAVTYVAPEVEGGFSIQQTVTGAGVTPAAAVFRIVLRASWNLF*
Ga0066684_102736531	3300005179	Soil	DVAPLVRLAPEFAAGFTAGYWTKQQDRYAFQLPQDSIALATRLGAPTAASLLDQGTSEHRLRLGFAMTYHGAMVEGGLSIEQTVSGGGFVPGATVYRLVMRTSRKLF*
Ga0066684_105630591	3300005179	Soil	KGRDHYSFRSPQDSTDLATRLGAPTSASVLDQGTSERRLQRGVAVTYVAPEVEGGFSIQQTVTGAGVTPAAAVFRIVLRASWNLF*
Ga0066678_100803051	3300005181	Soil	LSHEFAAGFTAGYFSKARDHYSYQSPQDSALVGLPASVLDAGTAQRWLRLGFAMTYHAPMVEGGLSIEQTVSGGGIVPAATVYRIVFRTSKKLF*
Ga0066678_107056001	3300005181	Soil	YTFQSPQDSIDLATRLGIPTPASLLDDGTSERRLRLGFALSYVGTTVEGGFSIEQTVTGAGVVPAATVYRIVFRTSRKLF*
Ga0066678_107654351	3300005181	Soil	APLVRLAPEFAVGVTAGYFSKRRDHYAFQSPQDSVALATRMGFATPANVLDAGTGQRWLRLGFAVTYHTPGVEGGFSIEQTVSGAGLVPGATIYRLVLRATRKLF*
Ga0066678_109084481	3300005181	Soil	LVPSAATTALRWDPGDYLGVDVAPLVRLAPQLAAGFTAGYWTKARDHYTFRSSQDSIDLATRLGIPTTASVLDAGTSQRWLRLGFALSYVGKTVEGGFSIEQTVTGAGVVPAATLYRIVFRTSRKLF*
Ga0066671_108912621	3300005184	Soil	LVRLAPEFAVGFTAGYWTKQRDRYAFQSPQDSVALANRLGGAPVAASVLDEGTLERRLRLGFAMTYHGATVEGGFSIEQTVSGRGVVPAATVYRLVLRTSRKLF*
Ga0066675_102543932	3300005187	Soil	KARDHYAFQSSQDSVALATRLGVPTPASVLDAGTSQRWLRLGFAMTYHAPTVEGGFSIEQTVSGAGLVPGATVYRIVLRTTRKFF*
Ga0070709_115820841	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	RLAPDFAVGFTASYWSKQRDHYAFQSPQDSVDLATRLGAPTSASVLDEGTSQRRLQLGFAVTYNGPTLEGGFSIEQTVSGAGVVPAATVYRLVLRTSRRFF*
Ga0066686_101302551	3300005446	Soil	WDPGDYVGVDVAPLVRLAPEFAAGVTAGYFSKERDHYAFQSSQDSIALTTRMGFATPASVLDQGTAQRWLRLGFAVTYHVPGVEGGFSIEQTVSGAGLVPGATVYRLVLRATRKLF*
Ga0066686_102176222	3300005446	Soil	ATADLRWDPGDYVGLDVAPLVRFAPQFAAGVTAGYFTKARDRYAFQSPQDSVALVTRMGFATPANVLDQGTAQRWLRLGFALTYHVPGVEGGFSIEQTVSGSGLVPGATVYRLVLRVTRKLF*
Ga0066686_109991852	3300005446	Soil	VDVAPLVRLAPEFAVGVTAGYFSKQRDHYAFQSPQDSVALATRTGFATPASVLDAGTGQRWLRLGFAVTYHTPGVEGGFSIEQTVSGAGLVRGATIYRLVLRATRKLF*
Ga0066689_106612622	3300005447	Soil	VHLAPQFAAGVTAGYFSKARDHYAFQSSQDSVALATRLGVPTPASVLDAGTSQRWLRLGFAVTYHAPTVEGGFSIEQTVSGAGLVPGVTVYRIVLRTTRKFF*
Ga0066682_100484523	3300005450	Soil	FTQASDHYAYQSAQDSVALAARMGAPTAASALDQGTSQRRVRLGFAATYHTPTVEGGFSIEQTVSGAGLVLGATLYRIVLRVSRKLF*
Ga0066682_108793671	3300005450	Soil	FAVGVTAGYFSKQRDHYAFQSPQDSVALATRMGFATPASVLDAGTGQRWLRLGFAMTYHTPGVEGGFSIEQTVSGAGLVPGVTIYRLVLRATRKLF*
Ga0066681_107721001	3300005451	Soil	GDYVGVDVAPLVRLAPEFAVGVTAGYFSKQRDHYAFQSPQDSVALATRMGFATPASVLDAGTGQRWLRLGFAMTYHTPGVEGGFSIEQTVSGAGLVPAVTIYRLVLRATRKLF*
Ga0070706_1000395891	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VRLAPTFAAGFTAGYFSKQRDHYAFQSPQDSVALATRMGFPTPASVLDDGTGQRWLRLGFAMTYHTPGVEGGFSIEQTVTGAGLVPGATVYRLVLRATRKLF*
Ga0070699_1000222381	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	PTFAAGFTAGYFSKQRDHYAFQSPQDSVALATRMGFPTPASVLDDGTGQRWLRLGFAMTYHTPGVEGGFSIEQTVSGAGLVPGATVYRLVLRATRKLF*
Ga0070697_1010656141	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	KARDHYSYQSPEDSTRIGLPASVLDAGTSQRWFRLGFAVTYHAPGVEGGFSIEQTVSGAGVVPAATVYRIVFRTSKKLF*
Ga0066697_106654442	3300005540	Soil	KERDRYAFQSSQDSVALATRMGFATPASVLDQGTAQRWLRLGFAVTYHVPGVEGGFSIEQTVSGAGLVPGATVYRLVLRATRKLF*
Ga0066695_101749331	3300005553	Soil	GVDVAPLVRLAPQLAAGFTAGYWTKARDHYTFRSSQDSIDLATRLGIPTPASVLDAGTSQRWLRLGFALSYVGKTVEGGFSIEQTVTGAGVVPAATLYRIVFRTSRKLF*
Ga0066695_105411942	3300005553	Soil	GVTAGYFSKQRDHYAFQSPQDSVALATRMGFATPASVLDAGTGQRWLRLGFAMTYHTPGVEGGFSIEQTVSGAGLVPGVTIYRLVLRATRKLF*
Ga0066661_100350951	3300005554	Soil	RLAPEFAAGFTAGYFSKARDHYAFQSSQDSVALASRLGFPTPASVLDAGTSQRWLRLGFAVTYHAPNVEGGFSIEQTVSGAGLVPGVTVYRIVLRTTRKFF*
Ga0066704_106062412	3300005557	Soil	PGDYVAVDVAPLVRLAPEFAAGFTAGYFSKARDHYAFQSSQDSVALASRLGFPTPASVLDAGTSQRWLRLGFAVTYHAPNVEGGFSIEQTVSGAGLVPGVTVYRIVLRTTRKFF*
Ga0066698_101123972	3300005558	Soil	GYFSKARDHYAFQSSQDSVALATRMGFPTAASVLDQGTGQRWLRLGFAVTYHAASVEGGFSIEQTVSGAGLVPGATVYRLVLRATRKLF*
Ga0066698_103630951	3300005558	Soil	DHYAFQSPQDSVALATRMGFATPASVLDAGTGQRWLRLGFAVTYHTPGVEGGFSIEQTVSGAGLVPGVTIYRLVLRATRKLF*
Ga0066698_109484191	3300005558	Soil	GDYVGVDVAPLVRLAPEFAVGFTAGYFSKQRDHYAFQSPQDSVALATRMGFATPASVLDAGTGQRWLRLGLAVTYHTPGVEGGFSIEQTVSGAGLVPAVTIYRLVLRATRKLF*
Ga0066700_101125772	3300005559	Soil	RYAFQSPQDSVALATRLGAPIAASVLDEGTSQRRLRLGFAMTYHGATVEGGFSIEQTVSGVGGFVPAATVYRLVMRTSRNLF*
Ga0066693_102185311	3300005566	Soil	SLRWDPGDYVGVDVAPLVRFASEFAAGVTAGYFTKQPDHYAFQSPQDSVALATRLGAPASASVLDQGTGQRQLRLGFAMTYHGATVEGGFSIEQTVSGVGGFVPAATVYRLVMRTSRKLF
Ga0066708_101707112	3300005576	Soil	SLRWDPGDYVGVDVAPLVRLAPEFAVGFTAGYWTKQRDRYAFQSPQDSVALANRLGGAPVAASVLDEGTLERRLRLGFAMTYHGATVEGGFSIEQTVSGVGGFVPAATVYRLVMRTSRKLF*
Ga0066691_109544101	3300005586	Soil	WDPGDYAGVDVAPMIQFAPTFAAGVTVGYFTQASDHYAYQSAQDSVALAARMGAPTAASALDQGTSQRRVRLGFAATYHTPTVEGGFSIEQTVSGAGLVLGATLYRIVLRVSRKLF*
Ga0066706_100936111	3300005598	Soil	VDVAPLVRLAPQLAAGFTAGYWTKARDHYTFRSSQDSIDLATRLGIPTPASVLDAGTSQRWLRLGFALSYVGKTVEGGFSIEQTVTGAGVVPAATLYRIVFRTSRKLF*
Ga0075289_10956722	3300005888	Rice Paddy Soil	RLSREFAAGFTAGYFTKARDHYAFQSAQDSVAVATSTGFPTAASVLDQGTSARWLRLGFAVTYHAPRVEGGFSIEQTVSGAGLVPGATLYRIVFRTSRKLF*
Ga0066656_100075741	3300006034	Soil	VRLAPQLAAGFTAGYWTKARDHYTFRSSQDSIDLATRLGIPTPASVLDAGTSQRWLRLGFALSYVGKTVEGGFSIEQTVTGAGVVPAATLYRIVFRTSRKLF*
Ga0070712_1016143751	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	EFAAGFTAGYFSKARDHYSYQSPQDSALVGLPASVLDAGTAQRWLRLGFAMTYHAPMVEGGLSIEQTVSGGGIVPAATVYRIVFRTSKKLF*
Ga0066659_101459651	3300006797	Soil	VAPMIQFAPTFAAGVTVGYFTQASDHYAYQSAQDSVALAARMGAPTAASALDQGTSQRRVRLGFAATYHTPTVEGGFSIEQTVSGAGLVLGATLYRIVLRVSRKLF*
Ga0079221_102861772	3300006804	Agricultural Soil	QQDRYAFLSPQDSVALATRLGAPASASVLDQGTAERRLRLGFALTYHGAMVEGGFSIEQTVSGRGVVPAATVYRLVIRTSRKLF*
Ga0079221_103660262	3300006804	Agricultural Soil	APLVRLGPEFAAGFTAGYFSKQRDHYAFQSSQDSVALATRMGFATPASVLDQGTAQRWLRLGFALTYHAPGVEGGFSIEQTVTGAGLVPGATVYRLVLRATRKLF*
Ga0075433_103842341	3300006852	Populus Rhizosphere	VAPLVRLAPQFAAGFTAGYFSKTRDRYAFQSSQDSVALATRMGFPTPASVLDEGTGQRWLRLGFAMTYHTPGVEGGFSIEQTVSGAGLVPAVTVYRLVLRVTRKLF*
Ga0075426_107736272	3300006903	Populus Rhizosphere	LVRLAPEFAVGVTAGYFSKQRDHYAFQSPQDSVALATRMGFPTPASVLDEGTGQRWLRLGFAMTYHTPGVEGGFSIEQTVSGAGLVPAVTVYRLVLRVTRKLF*
Ga0099794_103381102	3300007265	Vadose Zone Soil	VRLAPEFAAGFTAGYFSKARDHYAFQSPQDSVALATRMGFPTPASVLDQGTAQRLLRLGFAVTYHTPGVEGGFSIEQTVSGAGLVPAATVYRLVLRATRKLF*
Ga0066710_1006297401	3300009012	Grasslands Soil	GFTAGYFSKARDHYAFQSSQDSVALATRLGVPTPASVLDAGTSQRWLRLGFAVTYHAPTVEGGFSIEQTVSGAGLVPGVTVYRIVLRTTRKFF
Ga0066710_1026027522	3300009012	Grasslands Soil	YVGVDVAPLVRLAPEFAVGVTAGYFSKQRDHYAFQSPQDSVALATRMGFATPASVLDAGTGQRWLRLGFAVTYHTPGVEGGFSIEQTVSGAGLVPGATVYRLVLRATRKLF
Ga0099827_119357332	3300009090	Vadose Zone Soil	GVDVAPLVRLAPEFAAGFTAGYFSKARDHDAFLSSQDSVDLATRLGVPTAASVLDVGTAQRSLRLGFAVTYHAPNVEGGFSIEQTVSGAGLVPGVTVYRLVLRTTRKLS*
Ga0127491_10619451	3300010111	Grasslands Soil	VDVAPLVRLAPEFAVGVTAGYFSKQRDHYAFQSPQDSVALATRMGFATPASVLDAGTGQRWLRLGFAMTYHTPGVEGGFSIEQTVSGAGLVPAVTIYRLVLRATRKLF*
Ga0127455_10361311	3300010132	Grasslands Soil	VGVDVAPLVRLAPEFAAGFTAGYFSKVRDRYAFQSSQDSVALATRMGFPTAASVLDQGTSQRWLRLGFAVTYHAGHVEGGFSIEQTVSGAGLVPGVTIYRLVLRATRKLF*
Ga0134088_105017542	3300010304	Grasslands Soil	RFAPTFAAGVTVGYFTQASDHYAYQSAQDSVALAARMGAPTAASALDQGTSQRRVRLGFAATYHTPTVEGGFSIEQTVSGAGLVLGATLYRIVLRVSRKLF*
Ga0134064_101962301	3300010325	Grasslands Soil	TAGYFSKQRDHYAFQSPQDSVTLATRMGFATPASVLDAGTGQRWLRLGFAMTYHTPGVEGGFSIEQTVSGAGLVPAVTIYRLVLRATQKLF*
Ga0134111_103463852	3300010329	Grasslands Soil	VRLAPEFAVGFTAGYFSKQRDHYAFQSPQDSVALATRMGFATPASVLDAGTGQRWLRLGFAVTYHTPGVEGGFSIEQTVSGAGLVPGATIYRLVLRATRKLF*
Ga0134111_103582272	3300010329	Grasslands Soil	RDRYAFQSSQDSVALATRMGFPTAASVLDQGTAQRWLRLGFALTYHTSSIDGGFSIEQTVSGAGLVPGATVYRLVLRATRKLF*
Ga0134111_104208851	3300010329	Grasslands Soil	GVDVAPLVRLAPEFAVGVTAGYFSKQRDHYAFQSPQDSVALATRMGFATPASVLDAGTGQRWLRLGFAMTYHTPGVEGGFSIEQTVSGAGLVPGVTIYRLVLRATRKLF*
Ga0134121_106764992	3300010401	Terrestrial Soil	APLVRLASEFAAGFTAGYFTKARDHYAFQSTQDSVALATRMGFATPASVLDQGTAQRWLRLGFALTYHAPSVEGGFSIEQTVSGAGLVPGATVYRLVLRVTRKLF*
Ga0137388_101536452	3300012189	Vadose Zone Soil	LRWDPGDYVGVDVAPLVRLASEFAAGFTAGYFTKARDHYAFQSTQDSVALATRMGFATPASVLDQGTAQRWLRLGFAVTYHAPSVEGGFSIEQTVSGAGLVPGATVYRLVLRATRKLF*
Ga0137365_104421651	3300012201	Vadose Zone Soil	AAGFTAGYFTKQPDHYAFQSPQDSVALATRLGAPASASVLDQGTGQRQLRLGFAMTYHGATVEGGFSIEQTVSGRGVVPAATVYRLVLRTSRKLF*
Ga0137381_114949141	3300012207	Vadose Zone Soil	AFLVPAAATADLRWDPGDYVGVDVAPLVRLAPEFAAGFTAGYFSKARDHYAFQSPQDSVALETRMGFPTPASVLDQGTAQRWLRLGFAVTYHVPGVEGGFSIEQTVSGAGLVPGATVYRLVLRATRKLF*
Ga0137387_101297612	3300012349	Vadose Zone Soil	VDVAPLVRLAPEFAVGFTAGYFSKQRDHYAFQSPQDSVALAARLGLPTPASVLDQGTSQRWLRLGFTATYHARNVEGGFSIEQTVSGAGLVPGATVYRLVLRVTRKLF*
Ga0137371_101907152	3300012356	Vadose Zone Soil	FTAGYWTKARDHYTFQSPQDSIDLATRLGIPTPASVLDAGTSQRWLRLGFTLSYVGKTVEGGFSIEQTVTGAGVVPAATRYRIVFRTSRKLF*
Ga0137361_112763391	3300012362	Vadose Zone Soil	LLVPAAATADLRWDPGDYVGLDVAPLVHLAPQFAAGFTAGYFSKARDHYAFQSSQDSVALATRLGVPTPASVLDAGTSQRWLRLGFAVTYHAPNVEGGFSIEQTVSGAGLVPGATVYRIVLRTTRKFF*
Ga0137373_107644061	3300012532	Vadose Zone Soil	WDAFLVPAAATADLRWDPGDYVGVDVAPLVRLAPAFAAGFTAGYFSKARDRYAFQSSQDSVALATRMGFPTAASVLDQGTSQRWLRLGFAVTYHVPGVEGGFSIEQTVSGAGLVPGATVYRLVLRATRKLF*
Ga0137398_100305834	3300012683	Vadose Zone Soil	YVGVDVAPLVRFASEFAAGFTASYWTKQTDQYAFQSPQDSVALATRLGTPTSASVLDEGTGQRQLRLGFAVTYHGAMVEGGFSIEQTVSGRGVVPAATVYRLVMRTSRKLF*
Ga0134110_102366682	3300012975	Grasslands Soil	SKQRDHYAFQSPQDSVALATRMGFATPASVLDAGTGQRWLRLGFAMTYHTPGVEGGFSIEQTVSGAGLVPAVTIYRLVLRATRKLF*
Ga0134087_103897561	3300012977	Grasslands Soil	SLRWDPGDYVGVDVAPLVRFASEFAAGVTAGYFTKQPDHYAFQSPQDSVALATRLGAPASASVLDQGTGQRQLRLGFAMTYHGATVEGGFSIEQTVSGRGVVPAATVYRLVLRTSRKLF*
Ga0134075_102632791	3300014154	Grasslands Soil	AAVDVAPLVNLSHEFAAGFTAGYFSKTRDHYAYRSAQDSIDLAARTGFPTAASVLDAGTAQRWLRLGFAVTYHAPGVEGGFSIEQTVTGAGVVPAATVYRIVFRTSKKLF*
Ga0134078_102115161	3300014157	Grasslands Soil	TQASDYYAYQSAQDSVALAARMGAPTAASALDQGTSQRRVRLGFAATYHTPTVEGGFSIEQTVSGAGLVLGATLYRIVLRVSRKLF*
Ga0137405_13231182	3300015053	Vadose Zone Soil	VDVAPLVRLAPEFAAGFTAGYFSKARDHYAFQSPQDSVALATRMGFPTPASVLDQGTAQRWSASACGDIPRPGVEGGFSIEQNRQRRWARPRGEVYRLVLRATRKLF*
Ga0137420_14055085	3300015054	Vadose Zone Soil	VDVAPLVRLAPAIPAGFTAGYFSKQRESLRVSVAAGLGGARDSHGFPTPASVLDEGTGQRWLRLGFAVTYHTPGVEGGFSIEQTVSGAGLVPGATVYRLVLRATRKLF*
Ga0137420_14055086	3300015054	Vadose Zone Soil	VDVAPLVRLAPQFAAGFTAGYFSSSAITTRFSLPQDSVALATRMGFPTPASVLDEGTGQRWLRLGFAVTYHTPGVEGGFSIEQTVSGAGLVPGATVYRLVLRATRKLF*
Ga0134085_105302731	3300015359	Grasslands Soil	EFAVGFTAGYFSKQRDHYAFQSPQDSVALATRMGFATPASVLDAGTGQRWLRLGFAMTYHTPGVEGGFSIEQTVSGAGLVPAVTIYRLVLRATRKLF*
Ga0184618_101953801	3300018071	Groundwater Sediment	YFSKTRDRYAFQSPQDSVALATRLGVPTAASVLDEDTAQRWLRLGFAMTYHAPNVEGGFSIEQTVSGAGLVPGATVYRIVLRTTRRLF
Ga0066655_106638252	3300018431	Grasslands Soil	YSFRSPQDSTDLATRLGAPTSASVLDQGTSERRLQLGVAVTYVAPEVEGGFSIQQTVTGAGVTPAAAVFRIVLRASWNLF
Ga0066667_115710951	3300018433	Grasslands Soil	GDYVGVDVAPLVRLAPEFAVGVTAGYFSKQRDHYAFQSPQDSVALATRMGFATPASVLDAGTGQRWLRLGFAMTYHTPGVEGGFSIEQTVSGAGLVPAVTIYRLVLRATRKLF
Ga0066662_100097724	3300018468	Grasslands Soil	YAAIGVAPLVNLSHEFAAGFTAGYFSKTRDHYAYRSAQDSIDLAARTGFPTAASVLDAGTAQRWLRLGFAVTYHAPGVEGGFSIEQTVTGAGVVPAATVYRIVFRTSKKLF
Ga0066669_103617542	3300018482	Grasslands Soil	PQDSTDLATRLGAPTSASVLDQGTSERRLQLGVAVTYVAPEVEGGFSIQQTVTGAGVTPAAAVFRIVLRASWNLF
Ga0210404_107896512	3300021088	Soil	RLTPEFAAGFTAGYFSKQRDHYAFQSPQDSVALATRMGFPTPASVLDEGTGQRWLRLGFAVTYHTPGVEGGFSIEQTVSGAGLVPGATVYRLVLRATRKLF
Ga0207653_100384372	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	YSYQSPQDSALVGLPASVLDAGTAQRWLRLGFAMTYHAPMVEGGLSIEQTVSGGGIVPAATVYRIVFRTSKKLF
Ga0207699_112507902	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	YVGVDVAPLVRLAPTFAAGLTAGYFSKQRDHYAFQSPQDSVSLATRMGFPTPAGVLDAGTGQRWLRLGFAVTYHAPSVEGGFSIEQTVSGAGLVPGATVYRLVLRVTRKLF
Ga0207693_113147892	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	YFSKARDHYSYQSPQDSALVGLPASVLDAGTAQRWLRLGFAMTYHAPMVEGGLSIEQTVSGGGIVPAATVYRIVFRTSKKLF
Ga0209235_11223302	3300026296	Grasslands Soil	KARDHYAFQSPQDSVALASRLGFPTPASVLDAGTSQRWLRLGFAVTYHAPNVEGGFSIEQTVSGAGLVPGVTVYRIVLRTTRKFF
Ga0209027_10613212	3300026300	Grasslands Soil	QPDHYAFQSPQDSVALATRLGAPASASVLDQGTGERLVRLGFAVTYHGAMVEGGLSIEQTVSGRGVVPAATVYRLVMRTSRRLF
Ga0209469_10274262	3300026307	Soil	DYVGVDVAPLVRLAPEFAAGVTAGYFSKERDHYAFQSSQDSIALTTRMGFATPASVLDQGTAQRWLRLGFAVTYHVPGVEGGFSIEQTVSGAGLVPGATVYRLVLRATRKLF
Ga0209055_11696982	3300026309	Soil	EFAAGLTAGYFSKARDHYAFQSSQDSVALVTRMGFATPASVLDEGTSERRLRLGFAMTYHGPTVEGGFSIEQTVSGVGGFVPAATVYRLVMRTSRNLF
Ga0209055_13054802	3300026309	Soil	PLVRLAPEFAAGFTAGYFSKARDHYAFQSSQDSVALASRLGFPTPASVLDAGTSQRWLRLGFAVTYHAPNVEGGFSIEQTVSGAGLVPGVTVYRIVLRTTRKFF
Ga0209153_12829401	3300026312	Soil	FAVGFTAGYWTKQRDRYAFQSPQDSVALANRLGGAPVAASVLDEGTLERRLRLGFAMTYHGATVEGGFSIEQTVSGVGGFVPAATVYRLVMRTSRKLF
Ga0209268_11921161	3300026314	Soil	DAFLVPAAATADLRWDPGDFVGVDVAPLVRLAPEFAVGVTAGYFSKQRDHYAFQSPQDSVALATRMGFATPASVLDAGTGQRWLRLGFAMTYHTPGVEGGFSIEQTVSGAGLVPGVTIYRLVLRATRKLF
Ga0209154_10932221	3300026317	Soil	TAGYFSKARDHYAFQSSQDSVALASRLGFPTPASVLDAGTSQRWLRLGFAVTYHAPNVEGGFSIEQTVSGAGLVPGVTVYRIVLRTTRKFF
Ga0209154_12555912	3300026317	Soil	ELRWDPGDYVGVDVAPLVRLAPEFAAGFTAGYFSKARDHYAFLSSQDSVDLATRLGVPTAASVLDAGTAQRSLRLGFAVTYHAPNVEGGFSIEQTVSGAGLVPGVTVYRLVLRTTRKLF
Ga0209647_11633221	3300026319	Grasslands Soil	VDVAPLVRLAPEFAAGFTAGYFSKARDHYAFQSPQDSVALATRMGFPTPASVLDQGTAQRLLRLGFAVTYHTPGVEGGFSIEQTVSGAGLAPAATVYRLVLRATRKLF
Ga0209472_12930732	3300026323	Soil	QDSVALSNRLGGAPVTASVLDEGTLERRLRLGFAMTYHGATVEGGFSIEQTVSGVGGFVPAATVYRLVMRTSRKLF
Ga0209801_12427712	3300026326	Soil	TKGRDHYTFQSPQDSIDLATRLGIPTPASLLDDGTSERRLRLGFALSYVGTTVEGGFSIEQTVTGAGVVPAATVYRIVFRTSRKLF
Ga0209266_11611702	3300026327	Soil	DHYAYQSAQDSVALAARMGAPTAASALDQGTSQRRVRLGFAATYHTPTVEGGFSIEQTVSGAGLVLGATLYRIVLRVSRKLF
Ga0209802_11752921	3300026328	Soil	HYAFQSSQDSVALATRMGFATPASVLDQGTAQRWVRLGFAVTYHVPGVEGGFSIEQTVSGAGLVPGATVYRLVLRATRKLF
Ga0209802_13130912	3300026328	Soil	LAPEFAVGFTAGYWTKQRDRYAFQSPQDSVALATRLGAPIAASVLDEGTSQRRLRLGFAMTYHGATVEGGFSIEQTVSGVGGFVPAATVYRLVLRTSRKLF
Ga0209803_10092341	3300026332	Soil	VDIAPLVRLAPEFAVGVTAGYFSKRRDHYAFQSPQDSVALATRMGFATPANVLDAGTGQRWLRLGFAVTYHTPGVEGGFSIEQTVSGAGLVPGATIYRLVLRATRKLF
Ga0209804_11068243	3300026335	Soil	EAFLVPAAATASLRWDPGDYVGVDVAPLVRFASEFAAGVTAGYFTKQPDHYAFQSPQDSVALATRLGAPTSASVLDQGTGERQLRLGFALTYHGATVEGGFSIQQTVSGRGVVPAATVYRLVLRTSRKLF
Ga0209804_13431521	3300026335	Soil	FTAGYFSKARDHYAFQSSQDSVALASRLGFPTPASVLDAGTSQRWLRLGFAVTYHAPNIEGGFSIEQTVSGAGLVPGVTVYRIVLRTTRKFF
Ga0257165_10439832	3300026507	Soil	AGYFSKQRDHYAFQSPQDSVALATRMGFATPASVLDEGTGQRWLRLGFAVTYHTPGVEGGFSIEQTVSGAGLVPGATVYRLVLRVTRKLF
Ga0209808_11339611	3300026523	Soil	ATASLRWDPGDYVGVDVAPLVRLAPEFAVGFTAGYWTKQRDRYAFQSPQDSVALANRLGGAPVAASVLDEGTLERRLRLGFAMTYHGATVEGGFSIEQTVSGVGGFVPAATVYRLVMRTSRKLF
Ga0209058_10706341	3300026536	Soil	QRDHYAFQSPQDSVALATRMGFATPASVLDAGTGQRWLRLGFAMTYHTPGVEGGFSIEQTVSGAGLVPAVTIYRLVLRATRKLF
Ga0209058_11862152	3300026536	Soil	VGVDVAPLVRLAPEFAAGFTAGYFSKARDHYAFQSPQDSVALATRLGLPTPAGVLDQGTSQRWLRLGFAATYHARNVEGGFSIEQTVSGAGLVPGATVYRLVLRATRKLF
Ga0209157_13119061	3300026537	Soil	VGVDVAPLVRLAPEFAAGFTAGYFSKARDHYAFQSPQDSVALATRLGLPTPASVLDQGTSQRWLRLGFAATYHARNVEGGFSIEQTVSGAGLVPGATVYRLVLRATRKLF
Ga0209056_100928141	3300026538	Soil	ARDHYAFQSSQDSVALATRLGVPTPASVLDAGTSQRWLRLGFAVTYHAPTVEGGFSIEQTVSGAGLVPGVTVYRIVLRTTRKFF
Ga0209156_100059921	3300026547	Soil	QDSVALATRLGAPASASVLDQGTGERLVRLGFAVTYHGAMVEGGLSIEQTVSGRGVVPAATVYRLVMRTSRRLF
Ga0209474_104094852	3300026550	Soil	FQSPQDSVALATRLGAPTSASVLDQGTGERQLRLGFALTYHGATVEGGFSIQQTVSGRGVVPAATVYRLVLRTSRKLF
Ga0208991_12326051	3300027681	Forest Soil	GDYVGVDFAPLVRLAPEFAAGFTAGYFSKARDHYAFQSAQDSVALATRLGFPTPASVLDAGTSQRWLRLGFALTYHAPSIEGGFSIEQTVSGAGVVPGATVYRIVLRTTRKFF
Ga0209689_10760782	3300027748	Soil	QSPQDSVALVTRMGFATPASVLDEGTSERRLRLGFAMTYHGPTVEGGFSIEQTVSGVGGFVPAATVYRLVMRTSRNLF
Ga0209283_100428371	3300027875	Vadose Zone Soil	DYVGVDVAPLLRLAPQFAAGFTAGYFSKQRDHYAFQSPQDSVALATRMGFATPASVLDEGTGQRWLRLGFAVTYHTPGVEGGFSIEQTVSGAGLVPGATLYRLVLRVTRKLF
Ga0209590_100632981	3300027882	Vadose Zone Soil	RLAPQFAAGFTAGYFSKQRDHYAFQSPQDSVALATRMGFPTPASVLDEGTGQRWLRLGFAVTYHTPGVEGGFSIEQTVSGAGLVPGATVYRLVLRATRKLF
Ga0209590_104838511	3300027882	Vadose Zone Soil	GVDVAPLVRLAPEFAVGFTAGYFSKQRDHYAFQSPQDSVALATRMGFATPASVLDAGTGQRWLRLGFAMTYHTAGVEGGFSIEQTVSGAGLVPAVTIYRLVLRATRKLF
Ga0307469_119565791	3300031720	Hardwood Forest Soil	VAPLINLSHEFAAGFTAGYFSKARDHYSYQSPQDSALVGLPASVLDAGTAQRWLRLGFAMTYHAPMVEGGLSIEQTVSGGGIVPAATVYRIVFRTSKKLF
Ga0307469_120848331	3300031720	Hardwood Forest Soil	FTKARDHYAFQSTQDSVALATRMGFATPASVLDQGTAQRWLRLGFAVTYHAPSVEGGFSIEQTVSGAGLVPGATVYRLVLRATRKLF
Ga0307468_1003383052	3300031740	Hardwood Forest Soil	RDHYSYQSPQDSALVGLPASVLDAGTAQRWLRLGFAMTYHAPMVEGGLSIEQTVSGGGIVPAATVYRIVFRTSKKLF
Ga0307479_108726911	3300031962	Hardwood Forest Soil	YLGVDVAPLIQLAPEFAAGFTAGYWTKAADHYAFQSPQDSVALATLLGGATSASVLDQGTSERSVRLGFAATYHGPTLEGGFSVEQTVSGAGRVPGATVYRLVLRLVRRLF
Ga0307471_1028038381	3300032180	Hardwood Forest Soil	LRWDPGDYAGVDVAPLLRLAPDFALGFTASYWSKQRDHYAFQSPQDSVDLATRLGAPTSASVLDEGTSQRRLQLGFAVTYNGPTLEGGFSIEQTVSGAGVVPAATVYRLVLRTSRRFF
Ga0307471_1037248951	3300032180	Hardwood Forest Soil	FAAGFTAGYFSKARDHYAYQTAQDSVDVATQTGFPTAASVLDAGTAQRWLRLGFAVTYHARTVEGGFSIEQTVSGAGIVPAATVYRIVFRTSRKLF
Ga0307472_1004858962	3300032205	Hardwood Forest Soil	FLVPAAATADLRWDPGDYVGVDVAPLLRLASEFAAGFTAGYFTKARDHYAFQSTQDSVALATRMGFATPASVLDQGTAQRWLRLGFAVTYHAPSVEGGFSIEQTVSGAGLVPGATVYRLVLRATRKLF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F058333

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences