Metagenome / Metatranscriptome Family F058385

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F058385
Family Type	Metagenome / Metatranscriptome
Number of Sequences	135
Average Sequence Length	79 residues
Representative Sequence	MSNREELVVFMTLPLGVEESIIPGVLASRGIPVHLSERYLARQGRYVEIQVPASRLEDARQALDDAKRVGEQLETGNEG
Number of Associated Samples	94
Number of Associated Scaffolds	135

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	66.67 %
% of genes near scaffold ends (potentially truncated)	25.19 %
% of genes from short scaffolds (< 2000 bps)	72.59 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (58.519 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (24.444 % of family members)
Environment Ontology (ENVO)	Unclassified (51.111 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (79.259 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 32.71% β-sheet: 22.43% Coil/Unstructured: 44.86%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.53
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.53
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 135 Family Scaffolds
PF07238	PilZ	10.37
PF08327	AHSA1	3.70
PF00072	Response_reg	2.96
PF03446	NAD_binding_2	2.22
PF15631	Imm-NTF2-2	1.48
PF02371	Transposase_20	1.48
PF12728	HTH_17	1.48
PF00589	Phage_integrase	1.48
PF13414	TPR_11	1.48
PF13936	HTH_38	1.48
PF00069	Pkinase	1.48
PF00106	adh_short	0.74
PF08238	Sel1	0.74
PF00756	Esterase	0.74
PF00501	AMP-binding	0.74
PF01555	N6_N4_Mtase	0.74
PF00440	TetR_N	0.74
PF02472	ExbD	0.74
PF03781	FGE-sulfatase	0.74
PF13646	HEAT_2	0.74
PF03853	YjeF_N	0.74
PF13620	CarboxypepD_reg	0.74
PF03544	TonB_C	0.74
PF00665	rve	0.74
PF14559	TPR_19	0.74
PF04264	YceI	0.74
PF13431	TPR_17	0.74
PF01740	STAS	0.74
PF12706	Lactamase_B_2	0.74
PF13581	HATPase_c_2	0.74
PF04956	TrbC	0.74
PF06035	Peptidase_C93	0.74
PF08031	BBE	0.74
PF00664	ABC_membrane	0.74
PF00248	Aldo_ket_red	0.74
PF01258	zf-dskA_traR	0.74
PF02776	TPP_enzyme_N	0.74
PF07973	tRNA_SAD	0.74
PF02225	PA	0.74
PF14534	DUF4440	0.74
PF12681	Glyoxalase_2	0.74
PF07606	DUF1569	0.74
PF02518	HATPase_c	0.74
PF01259	SAICAR_synt	0.74
PF13531	SBP_bac_11	0.74
PF01548	DEDD_Tnp_IS110	0.74
PF13249	SQHop_cyclase_N	0.74
PF07963	N_methyl	0.74

COG ID	Name	Functional Category	% Frequency in 135 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	5.93
COG3547	Transposase	Mobilome: prophages, transposons [X]	2.22
COG0062	NAD(P)H-hydrate repair enzyme Nnr, NAD(P)H-hydrate epimerase domain	Nucleotide transport and metabolism [F]	0.74
COG0152	Phosphoribosylaminoimidazole-succinocarboxamide synthase	Nucleotide transport and metabolism [F]	0.74
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	0.74
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.74
COG0848	Biopolymer transport protein ExbD	Intracellular trafficking, secretion, and vesicular transport [U]	0.74
COG0863	DNA modification methylase	Replication, recombination and repair [L]	0.74
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	0.74
COG1262	Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain	Posttranslational modification, protein turnover, chaperones [O]	0.74
COG1734	RNA polymerase-binding transcription factor DksA	Transcription [K]	0.74
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	0.74
COG2353	Polyisoprenoid-binding periplasmic protein YceI	General function prediction only [R]	0.74
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	0.74
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	0.74
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	0.74
COG3672	Predicted transglutaminase-like protein	Posttranslational modification, protein turnover, chaperones [O]	0.74
COG3838	Type IV secretory pathway, VirB2 component (pilin)	Intracellular trafficking, secretion, and vesicular transport [U]	0.74
COG4584	Transposase	Mobilome: prophages, transposons [X]	0.74

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	59.26 %
Unclassified	root	N/A	40.74 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	58.52 %
Unclassified	root	N/A	40.74 %
Viruses	superkingdom	All Organisms → Viruses	0.74 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	58.52 %
Unclassified	root	N/A	40.74 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.74 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	30.37 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.96 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.74 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.74 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.74 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	14.07 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4.44 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.48 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.74 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.74 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.74 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.07 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	3.70 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.74 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.74 %
candidate division KSB3	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB3	0.74 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.74 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.74 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.07 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3.70 %
candidate division KSB3 bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB3 → candidate division KSB3 bacterium	0.74 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	0.74 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.74 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.74 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.74 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.07 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1.48 %
unclassified Bryobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae	0.74 %
Acidipila	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila	0.74 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	0.74 %
candidate division KSB3 bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB3 → candidate division KSB3 bacterium	0.74 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.74 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.74 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.07 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1.48 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	0.74 %
unclassified Acidipila	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila	0.74 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	0.74 %
candidate division KSB3 bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB3 → candidate division KSB3 bacterium	0.74 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.74 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.74 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.07 %
Candidatus Koribacter versatilis Ellin345	isolate	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin345	1.48 %
Acidipila sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila → Acidipila sp.	0.74 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	0.74 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	0.74 %
candidate division KSB3 bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB3 → candidate division KSB3 bacterium	0.74 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.74 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.74 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001082\|JGI12664J13189_1006067	All Organisms → cellular organisms → Bacteria → Acidobacteria	834	Open in IMG/M
3300001151\|JGI12713J13577_1001041	All Organisms → cellular organisms → Bacteria	2599	Open in IMG/M
3300001175\|JGI12649J13570_1002076	All Organisms → cellular organisms → Bacteria	3077	Open in IMG/M
3300001471\|JGI12712J15308_10003893	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4307	Open in IMG/M
3300001593\|JGI12635J15846_10455030	Not Available	762	Open in IMG/M
3300001593\|JGI12635J15846_10651024	Not Available	610	Open in IMG/M
3300002245\|JGIcombinedJ26739_100194169	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1919	Open in IMG/M
3300004080\|Ga0062385_10155677	All Organisms → cellular organisms → Bacteria	1186	Open in IMG/M
3300004082\|Ga0062384_100261167	Not Available	1056	Open in IMG/M
3300004082\|Ga0062384_100663532	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	714	Open in IMG/M
3300004082\|Ga0062384_100808546	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300004092\|Ga0062389_101042702	Not Available	1003	Open in IMG/M
3300004092\|Ga0062389_101799640	Not Available	792	Open in IMG/M
3300004631\|Ga0058899_11623154	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	612	Open in IMG/M
3300004635\|Ga0062388_100173425	Not Available	1669	Open in IMG/M
3300004635\|Ga0062388_102427073	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300005174\|Ga0066680_10338918	Not Available	959	Open in IMG/M
3300005445\|Ga0070708_100679374	Not Available	970	Open in IMG/M
3300005533\|Ga0070734_10057534	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2338	Open in IMG/M
3300005538\|Ga0070731_10482752	Not Available	825	Open in IMG/M
3300005557\|Ga0066704_10189261	Not Available	1389	Open in IMG/M
3300005561\|Ga0066699_10066446	Not Available	2278	Open in IMG/M
3300005591\|Ga0070761_10124334	Not Available	1499	Open in IMG/M
3300005591\|Ga0070761_10155173	All Organisms → cellular organisms → Bacteria	1343	Open in IMG/M
3300005602\|Ga0070762_10582547	All Organisms → cellular organisms → Bacteria → Proteobacteria	741	Open in IMG/M
3300005610\|Ga0070763_10920613	Not Available	521	Open in IMG/M
3300005712\|Ga0070764_10592113	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300005712\|Ga0070764_11108115	All Organisms → cellular organisms → Bacteria → Acidobacteria	502	Open in IMG/M
3300006173\|Ga0070716_100819092	Not Available	722	Open in IMG/M
3300006176\|Ga0070765_100022169	All Organisms → cellular organisms → Bacteria	4777	Open in IMG/M
3300006176\|Ga0070765_100473649	All Organisms → cellular organisms → Bacteria → Acidobacteria	1175	Open in IMG/M
3300006176\|Ga0070765_100853574	Not Available	860	Open in IMG/M
3300006176\|Ga0070765_101285789	Not Available	690	Open in IMG/M
3300006854\|Ga0075425_100384427	All Organisms → cellular organisms → Bacteria	1617	Open in IMG/M
3300009162\|Ga0075423_10424655	All Organisms → cellular organisms → Bacteria → Acidobacteria	1396	Open in IMG/M
3300009628\|Ga0116125_1005167	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3895	Open in IMG/M
3300009792\|Ga0126374_11655223	Not Available	531	Open in IMG/M
3300010043\|Ga0126380_10075710	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila → Acidipila sp.	1929	Open in IMG/M
3300010043\|Ga0126380_10367848	Not Available	1054	Open in IMG/M
3300010048\|Ga0126373_10079808	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2979	Open in IMG/M
3300010358\|Ga0126370_10236342	All Organisms → cellular organisms → Bacteria	1407	Open in IMG/M
3300010358\|Ga0126370_10671988	Not Available	906	Open in IMG/M
3300010359\|Ga0126376_11729906	Not Available	661	Open in IMG/M
3300010359\|Ga0126376_11809471	Not Available	649	Open in IMG/M
3300010360\|Ga0126372_11314638	Not Available	752	Open in IMG/M
3300010360\|Ga0126372_11997850	Not Available	626	Open in IMG/M
3300010376\|Ga0126381_100150071	All Organisms → cellular organisms → Bacteria	3059	Open in IMG/M
3300010379\|Ga0136449_100250018	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	3295	Open in IMG/M
3300011120\|Ga0150983_15557394	All Organisms → cellular organisms → Bacteria	1216	Open in IMG/M
3300012918\|Ga0137396_10437611	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	969	Open in IMG/M
3300012929\|Ga0137404_10578549	Not Available	1008	Open in IMG/M
3300012948\|Ga0126375_11279814	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	615	Open in IMG/M
3300012948\|Ga0126375_11778859	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300014169\|Ga0181531_10030997	All Organisms → cellular organisms → Bacteria → Acidobacteria	3085	Open in IMG/M
3300014169\|Ga0181531_10354085	Not Available	901	Open in IMG/M
3300014489\|Ga0182018_10155334	All Organisms → cellular organisms → Bacteria	1305	Open in IMG/M
3300016445\|Ga0182038_10299823	All Organisms → cellular organisms → Bacteria → Acidobacteria	1313	Open in IMG/M
3300017942\|Ga0187808_10369615	Not Available	653	Open in IMG/M
3300020579\|Ga0210407_10565170	Not Available	887	Open in IMG/M
3300020580\|Ga0210403_10003285	All Organisms → cellular organisms → Bacteria	14308	Open in IMG/M
3300020581\|Ga0210399_10191386	Not Available	1700	Open in IMG/M
3300020583\|Ga0210401_10004651	All Organisms → cellular organisms → Bacteria	14327	Open in IMG/M
3300020583\|Ga0210401_10031217	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5074	Open in IMG/M
3300020583\|Ga0210401_10241967	Not Available	1663	Open in IMG/M
3300021088\|Ga0210404_10212747	Not Available	1040	Open in IMG/M
3300021168\|Ga0210406_10373819	Not Available	1146	Open in IMG/M
3300021168\|Ga0210406_10833176	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300021168\|Ga0210406_11053661	Not Available	602	Open in IMG/M
3300021170\|Ga0210400_10001265	All Organisms → cellular organisms → Bacteria	25326	Open in IMG/M
3300021170\|Ga0210400_10022973	All Organisms → cellular organisms → Bacteria	4852	Open in IMG/M
3300021170\|Ga0210400_10632900	Not Available	881	Open in IMG/M
3300021171\|Ga0210405_10030474	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4325	Open in IMG/M
3300021171\|Ga0210405_11004164	Not Available	629	Open in IMG/M
3300021180\|Ga0210396_10540064	All Organisms → Viruses → Predicted Viral	1017	Open in IMG/M
3300021181\|Ga0210388_10207347	All Organisms → cellular organisms → Bacteria	1715	Open in IMG/M
3300021181\|Ga0210388_10400063	Not Available	1207	Open in IMG/M
3300021181\|Ga0210388_10582959	Not Available	979	Open in IMG/M
3300021181\|Ga0210388_11637065	Not Available	534	Open in IMG/M
3300021402\|Ga0210385_10016083	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4658	Open in IMG/M
3300021402\|Ga0210385_10348180	All Organisms → cellular organisms → Bacteria → Acidobacteria	1106	Open in IMG/M
3300021420\|Ga0210394_10003611	All Organisms → cellular organisms → Bacteria → Acidobacteria	19079	Open in IMG/M
3300021433\|Ga0210391_10045523	All Organisms → cellular organisms → Bacteria	3497	Open in IMG/M
3300021474\|Ga0210390_10441201	Not Available	1099	Open in IMG/M
3300021475\|Ga0210392_10399435	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1001	Open in IMG/M
3300021477\|Ga0210398_10139518	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1971	Open in IMG/M
3300021477\|Ga0210398_11062609	Not Available	644	Open in IMG/M
3300022504\|Ga0242642_1025276	Not Available	832	Open in IMG/M
3300022722\|Ga0242657_1213045	Not Available	539	Open in IMG/M
3300022733\|Ga0224562_1000473	All Organisms → cellular organisms → Bacteria → Acidobacteria	2445	Open in IMG/M
3300024271\|Ga0224564_1042921	Not Available	872	Open in IMG/M
3300024271\|Ga0224564_1137913	Not Available	503	Open in IMG/M
3300025910\|Ga0207684_10310719	Not Available	1359	Open in IMG/M
3300026374\|Ga0257146_1065418	Not Available	590	Open in IMG/M
3300026498\|Ga0257156_1133143	All Organisms → cellular organisms → Bacteria → Acidobacteria	518	Open in IMG/M
3300027370\|Ga0209010_1000176	All Organisms → cellular organisms → Bacteria	24374	Open in IMG/M
3300027505\|Ga0209218_1034988	Not Available	987	Open in IMG/M
3300027545\|Ga0209008_1005424	Not Available	3032	Open in IMG/M
3300027545\|Ga0209008_1027325	All Organisms → cellular organisms → Bacteria	1330	Open in IMG/M
3300027567\|Ga0209115_1038343	All Organisms → cellular organisms → Bacteria → Acidobacteria	1087	Open in IMG/M
3300027609\|Ga0209221_1044278	All Organisms → cellular organisms → Bacteria → Acidobacteria	1182	Open in IMG/M
3300027676\|Ga0209333_1058788	All Organisms → cellular organisms → Bacteria → Acidobacteria	1058	Open in IMG/M
3300027795\|Ga0209139_10017916	All Organisms → cellular organisms → Bacteria	2569	Open in IMG/M
3300027826\|Ga0209060_10204819	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	908	Open in IMG/M
3300027853\|Ga0209274_10261761	Not Available	886	Open in IMG/M
3300027884\|Ga0209275_10399051	All Organisms → cellular organisms → Bacteria → Proteobacteria	776	Open in IMG/M
3300027895\|Ga0209624_10331989	Not Available	1013	Open in IMG/M
3300027908\|Ga0209006_10000040	All Organisms → cellular organisms → Bacteria → Acidobacteria	123317	Open in IMG/M
3300027908\|Ga0209006_10156820	All Organisms → cellular organisms → Bacteria	1996	Open in IMG/M
3300028047\|Ga0209526_10197876	All Organisms → cellular organisms → Bacteria	1393	Open in IMG/M
3300028731\|Ga0302301_1010404	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2911	Open in IMG/M
3300028871\|Ga0302230_10046223	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1860	Open in IMG/M
3300028906\|Ga0308309_10042859	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3207	Open in IMG/M
3300028906\|Ga0308309_11062473	Not Available	700	Open in IMG/M
3300030007\|Ga0311338_10489845	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1292	Open in IMG/M
3300030741\|Ga0265459_13077462	Not Available	582	Open in IMG/M
3300031090\|Ga0265760_10007176	All Organisms → cellular organisms → Bacteria	3193	Open in IMG/M
3300031708\|Ga0310686_100173422	All Organisms → cellular organisms → Bacteria	6753	Open in IMG/M
3300031708\|Ga0310686_106701113	All Organisms → cellular organisms → Bacteria	2079	Open in IMG/M
3300031708\|Ga0310686_108970969	Not Available	508	Open in IMG/M
3300031708\|Ga0310686_114694732	All Organisms → cellular organisms → Bacteria → Acidobacteria	2617	Open in IMG/M
3300031715\|Ga0307476_10372275	Not Available	1053	Open in IMG/M
3300031718\|Ga0307474_10565621	All Organisms → cellular organisms → Bacteria	894	Open in IMG/M
3300031718\|Ga0307474_10942076	Not Available	683	Open in IMG/M
3300031718\|Ga0307474_11031570	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin345	651	Open in IMG/M
3300031753\|Ga0307477_10002217	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	15224	Open in IMG/M
3300031754\|Ga0307475_10117805	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2088	Open in IMG/M
3300031754\|Ga0307475_10170417	All Organisms → cellular organisms → Bacteria → Acidobacteria	1735	Open in IMG/M
3300031754\|Ga0307475_11183702	Not Available	596	Open in IMG/M
3300031823\|Ga0307478_10504691	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin345	1008	Open in IMG/M
3300031954\|Ga0306926_10581733	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1369	Open in IMG/M
3300032828\|Ga0335080_10119166	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2929	Open in IMG/M
3300032828\|Ga0335080_10321829	All Organisms → cellular organisms → Bacteria	1674	Open in IMG/M
3300033158\|Ga0335077_10097847	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB3 → candidate division KSB3 bacterium	3448	Open in IMG/M
3300033158\|Ga0335077_10127716	All Organisms → cellular organisms → Bacteria	2946	Open in IMG/M
3300034163\|Ga0370515_0010751	All Organisms → cellular organisms → Bacteria	4347	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.52%
Host-Associated	Host-Associated	1.48%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.89%
Aquatic	Environmental → Aquatic	9.63%
Plants	Host-Associated → Plants	1.48%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	86.67%
Freshwater	Environmental → Aquatic → Freshwater	9.63%
Peat	Environmental → Terrestrial → Peat	2.22%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.48%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	54.81%
Loam	Environmental → Terrestrial → Soil → Loam	27.41%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	9.63%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.44%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.22%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.48%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	32.59%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	25.19%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.00%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	8.15%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.70%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.22%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.22%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.22%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.48%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.74%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.74%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	24.44%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	14.81%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	10.37%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.63%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	6.67%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	6.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.93%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.22%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.22%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.22%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.96%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.48%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.48%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.48%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.74%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.74%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.74%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.74%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.74%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001082	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O3	Environmental	Open in IMG/M
3300001151	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O3	Environmental	Open in IMG/M
3300001175	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3	Environmental	Open in IMG/M
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009628	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300022504	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-2-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022733	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU3	Environmental	Open in IMG/M
3300024271	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU5	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026374	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-A	Environmental	Open in IMG/M
3300026498	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-A	Environmental	Open in IMG/M
3300027370	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O3 (SPAdes)	Environmental	Open in IMG/M
3300027505	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027567	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027609	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027676	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3 (SPAdes)	Environmental	Open in IMG/M
3300027795	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028731	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E1_2	Environmental	Open in IMG/M
3300028871	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_1	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030741	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ANR Co-assembly	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12664J13189_10060672	3300001082	Forest Soil	MTLPFGVEESIIPGVLASRGIPVHVSERYLARQGRYVEIQVPASRLDDARRALDEAKRVGGQLKTGNED*
JGI12713J13577_10010414	3300001151	Forest Soil	MSNREELVVFMTLPRGVDESIIPGVLASRGITVYLSERYLGHLGQYVEIQVPASRLEDARRALEDAKRVGEQMKSESEE*
JGI12649J13570_10020764	3300001175	Forest Soil	MRADSVSRGQDDQEELVVFMTLPFGVEESIIPGVLASRGIPVHVSERYLARQGRYVEIQVPASRLDDARRALDEAKRVGGQLKTGNED*
JGI12712J15308_100038935	3300001471	Forest Soil	MSDQEELVVFMTLPFGVEESIIPGVLASRGIPVHLSERFLARQGRYVEIQVPASRLEDARQALDDAKRVGEQLETGNEG*
JGI12635J15846_104550301	3300001593	Forest Soil	MSHQEELVVFMTLPFGVDESIIPGVLASRGIPVHLSERYLARQGRYVESQVPASRLEDTRRALDDARRVG
JGI12635J15846_106510241	3300001593	Forest Soil	MPNQEEFVVFMTLPFGVEESIIPGVLASRGIPVQVSERYLARQGRYVEIQVPASRLDDARRALDAAKRVGGQLKTGCED*
JGIcombinedJ26739_1001941691	3300002245	Forest Soil	MSNPEELVVFMTLPLGVDESIIPGVLASRGIPVHLSERRLARQGRYVEIQVPVSRLEDARRALEDAKRVGEQLKAENED*
Ga0062385_101556771	3300004080	Bog Forest Soil	MPDHEQLVVFMTLPFGVEESIIPGVLASRGIPVHLSERFLARQGRYVEIQVPASRLADARQALDDAKRVGKQLHNSGNAAN
Ga0062384_1002611672	3300004082	Bog Forest Soil	LVVFMTLPFGVEESIIPGVLASRGIPVHLSERFLARQGRYVEIQVPASRLADARQALDDAKRVGKQLHISGNAANQDFKG*
Ga0062384_1006635321	3300004082	Bog Forest Soil	MRSPGTDPFADGPIRRYPYPEANLANPDELVLFMTLPVGVNELIIPGVLTSRDIPVHLTERFFARQGRYVEIRVPASRLEDARRALDDAKRVGENLDSGTEV*
Ga0062384_1008085462	3300004082	Bog Forest Soil	MPDHEALVVFMTLPFGVEESIIPGVLASRGIPVHLSERFLARQGRYVEIQVPASRLADARQALDDAKRVGKQLETGNEN*
Ga0062389_1010427021	3300004092	Bog Forest Soil	MSNPEELVVFMTLPVGVDESIIPGVLASRGIPVHLSERYLARQGRYVEIQVPASRLEDARRALDGAKRVGEQIKSGSEV*
Ga0062389_1017996401	3300004092	Bog Forest Soil	MSNQEELVVFMTLPLGVDESIIPGVLASRGIPVHLSERYLARQGRYVEIQVPASRLEDARRALDDAKRVGDQLKTGNKG*
Ga0058899_116231542	3300004631	Forest Soil	VIPDPEELVVFMKLERGVETALIPGVLASRDIPVVLSEQHPAHQRWHVEIKVPASRIEEARRALEDAKQFGDLMDQETDD*
Ga0062388_1001734252	3300004635	Bog Forest Soil	FMTLPFGVEESIIPGVLASRGIPVHLSERFLARQGRYVEIQVPASRLADARQALDDAKRVGKQLHISGNAANQDFKG*
Ga0062388_1024270732	3300004635	Bog Forest Soil	RTGDALGDVFGDYTLILRPEAKMPDHEALVVFMTLPFGVEESIIPGVLASRGIPVHLSERFLARQGRYVEIQVPASRLADARQALDDAKRVGKQLETGNEN*
Ga0066680_103389182	3300005174	Soil	LPDSDELVIFMTLPVGVDELIIPGVLASRDIPVHLTERYFARQGRYVEIRVPASRLEDARRALDDAKRVGEKLDSGTEV*
Ga0070708_1006793741	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MSNPEELVIFMTLPVGVDELIIPGVLASRDIPVHLTERYFARQGRYVEIRVPASRLEDARRALDDAKRVGETLDSGTEV*
Ga0070734_100575342	3300005533	Surface Soil	MSNSEEFVAFMTLPFGIEESIIPGVLASRGIPIQLQERYLARQGRYVVIQVPRSRLEDAKRALDDAKQVGDQMESEDKNNSPTEG*
Ga0070731_104827522	3300005538	Surface Soil	MSDHRREDNMPNPDELVVFMALPVGVDESIIPGVLASRGIPFKLLERFLARQGRYVEILVPASRLQDARNVLDEAKQVGEQLKSGNED*
Ga0066704_101892612	3300005557	Soil	LPDSDELVIFMTLPVGVDELIIPGVLASRDIPVHLTERYFARQGRYVEIRVPASRLEDARRALDDAKWVGENLDSGTEV*
Ga0066699_100664463	3300005561	Soil	MADSNELVVFMTLPRGVEEAIIPGVLASRNVPFVLVDRYLAHQGQYVEVQVPASRLKDARQALADAKKVGRVLNF*
Ga0070761_101243341	3300005591	Soil	MPNPDELVVFMTLPVGVDESIIPGVLASRGIPFELSERYLARQGRYVEIQVPASRLEDARKALDDAKQVGKQLKAESEG*
Ga0070761_101551733	3300005591	Soil	MPNSEELVVFMTLPRGVDESIIPGVLASRGIPVYLSERYLAHLGRYVEIQVPASRLEDARRALDDAKRVGEQMNSESEG*
Ga0070762_105825472	3300005602	Soil	IPRLKANMSNSEELVVFMTLPRGVDESIIPGVLAGRGIPVYLSERYLGHLGQYVEIQVPASRLEDARRALEDAKLVGEQMKSGSEE*
Ga0070763_109206131	3300005610	Soil	MSNEEELVVFMTLPLGVEESIIPGVLASRGIPVHLSERYLARQGRYVEIQVPASRLEDARRALDDAKRVGEQLETGNEDGCRALRHNDANELLLQPTKT*
Ga0070764_105921132	3300005712	Soil	VDTSAHLSGNPKSILRYAISFSLRRIPRLKANMSNSEELVVFMTLPRGVDESIIPGVLASRGIPVYLSERYLGHLGQYVEIQVPASRLEDARRALEDAKLVGEQMKSGSEE*
Ga0070764_111081151	3300005712	Soil	FGVEESIIPGVLASRGIPVQVSERYLARQGRYVEIQVPASRLDDARRALEDAKRVGGQLKTGGED*
Ga0070716_1008190921	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MADSNELVVFMTLPRGVEEAIIPGVLASRNVPFVLVDRYLAHQGQYVEVQVPASRLKDARQALADAKKVGKVLNF*
Ga0070765_1000221697	3300006176	Soil	MSNPDELVVFMTLPVGVDESIIPGVLASRGIPFKLSERYLARQGRYVEIQVPASRLEDARQALDDAKRVGEQLKSESED*
Ga0070765_1004736492	3300006176	Soil	MSKQEELVVFMTLPFGVEESIIPGVLASRGIPVQVSERYLARQGRYVEIQVPASRLDDARRALEDAKRVGGQLKTGGED*
Ga0070765_1008535742	3300006176	Soil	MSNQEELVVFMTLPLGVEESIIPGVLASRGIPVHLSERYLARQGRYVEIQVPASRLEDARRALDDAERVGEQLETGNQD*
Ga0070765_1012857891	3300006176	Soil	VEIRTLIPCSEANMSNPEELVVFMTLPVGADESIIPGVLASRGIPVHLSERRLARQGRNVEIQVPASRLEDARRALDDAKWVGEQLKAEYEG*
Ga0075425_1003844273	3300006854	Populus Rhizosphere	MQDQSCCILVQTADPDELVIFMTLPVGVDELIIPGVLASRDIPVHLTERYLARQGRYVEIRVPASRLEDAKRALADAKRVGENLDSSTEV*
Ga0075423_104246552	3300009162	Populus Rhizosphere	LADPDELVIFMTLPVGVDELIIPGVLASRDIPVHLTERYLARQGRYVEIRVPASRLEDAKRALADAKRVGENLDSSTEV*
Ga0116125_10051675	3300009628	Peatland	MSNSEEFTAFMTLPFGVEQSIIPGVLASRGIPFRLFERFLAHQGRSLEIQVPASRLDDARQALNDAKQVGEQLHPESEV*
Ga0126374_116552232	3300009792	Tropical Forest Soil	MSNPDELVHFMTLRGVDALIIPGVLESRDIPVHLTERYFARQGRSLEIRIPASRVEDAKRALDDAKRVGEQLDSTTEV*
Ga0126380_100757103	3300010043	Tropical Forest Soil	MSNPDELVLFMTLRGVDALIIPGVLESRDIPVHLTERYFARQGRSLEIRVPASRVEDAKRALDDARRVGEQLNSTTEV*
Ga0126380_103678482	3300010043	Tropical Forest Soil	MSNPDELVIFMTLPVGVDELIIPGVLASRDIPVHLTERYFARQGRYLEIRVPASRLENARRRALDDAKRVGENLDPGTEV*
Ga0126373_100798081	3300010048	Tropical Forest Soil	MTLPVGIDELIIPGVLSSRDIPVHLTERYFARQGRYLEIRVPASRLEDARRALDDAKLVGENLDSSTQV*
Ga0126370_102363422	3300010358	Tropical Forest Soil	MANPDELVLFMTLRGVDALIIPGVLASRDIPVHLTERYFARQGRSLEIRVPTSRLEDAKRALDDAKRVGEKLDSNAEV*
Ga0126370_106719882	3300010358	Tropical Forest Soil	MSNQDELVILMTLPVGVDELIIPGVLASRDIPVHLTERYFARQGRYLEIRVPASRLEDARRALDDAKRVVENLDPGTEV*
Ga0126376_117299061	3300010359	Tropical Forest Soil	MSNPDELVIFMTLPVGVDELIIPGVLASRDIPVHLTERYFARQGRYLEIRVPASRLQDARRALNDAKRVGENLDPGTEV*
Ga0126376_118094712	3300010359	Tropical Forest Soil	MSKPDELVLFMTARGVDELIIPGVLESRDIPIHLTERYFARQGRSLEIRVPASRVEDAKRALDDAKRVGEKLDPDTEV*
Ga0126372_113146382	3300010360	Tropical Forest Soil	MSNPEEFVIFMTLPFGIDESIIPGVLTSRGIPVYLSERFLAHQGRYVEIRIPASRLEDARRALDDAKRAGENLNSESEV*
Ga0126372_119978502	3300010360	Tropical Forest Soil	MKKYMGNSEELVVFMTLPLGVDESIIPGVLASRGIPVYLSERYLARQGRYVEIRVPASRLEDARRALDDAKRVGERLKPGPED*
Ga0126381_1001500713	3300010376	Tropical Forest Soil	MFKPDELVLFMTLRGGDALIIPGVLTSRDIPIHLTERYFARQGRSLEIRVPASRIEDAKRALEDAKQVGEQLDSTTEV*
Ga0136449_1002500183	3300010379	Peatlands Soil	MSNPEELVVFMTLPFGVEESIIPGVLRSRGIPVSLSERYLARLGRYVEIRVPASRVEDARRALDDAKRVGEQLESEGEG*
Ga0150983_155573941	3300011120	Forest Soil	MSDQEELVVFMTLPLGVEESIIPGVLASRGIPVHLSERYLARQGRYVEIQVPASRLEDARQALDDARRVGEQLETGNEG*
Ga0137396_104376111	3300012918	Vadose Zone Soil	MSNPEELVIFMTLPFGVDESIIPGVLTSRGIPVYLCERFLAHQGRYVEIRVPASRLEDARRALDDAKRVGENLNSESEV*
Ga0137404_105785492	3300012929	Vadose Zone Soil	LANPDELVIFMTLPVGVNELIIPGVLASRDIPVHLTERYFARQGRYVEIRVPASRLEDARRALDDAKRVGENLDSGTEV*
Ga0126375_112798142	3300012948	Tropical Forest Soil	MSNPDELVIFMTLPVGVDELIIPGVLASRDIPVHLTERYFARQGRYLEIRVPASRLENARRRALDDAKRVGENLDPGTEVL
Ga0126375_117788592	3300012948	Tropical Forest Soil	VIFMTLPVGVDELIIPSVLASRDIPVHLTERYFARQGRYLEIRVPASRLEDVRRALDDAKRVGENLDPGTEVLMWRSAWETALSPT*
Ga0181531_100309976	3300014169	Bog	EQSIIPGVLASRGIPFRLFERFLAHQGRSLEIQVPASRLDDARQALNDAKQVGEQLHPESEV*
Ga0181531_103540852	3300014169	Bog	MPDSEELVVFMKLKFGVEETVIPGVLASRGIPVVLSEHHPARQRRYAELKIPASRLDEARCALEDAKRLGELMDDETHE*
Ga0182018_101553343	3300014489	Palsa	MTLPFGVEESIIPGVLASRGIPVHVSERYLARQGRYVEIQVPASRLDDARRALDEAKRVGGQLKTGN
Ga0182038_102998232	3300016445	Soil	MSNPDELVIFMTLPVGVDELTIPGVFASRDIPVHLTERYFARQGRYLEIRVPASRLEDARRALDDAKRVGENLAPGSGV
Ga0187808_103696151	3300017942	Freshwater Sediment	MSNQEELFAFMTLPLGVDESIIPGVLASGGIPVYLSERYLARQGRYVEFQVPASRLEDARRALDDAKRVGEQLKSGTED
Ga0210407_105651701	3300020579	Soil	MADSNELVVFMTLPRGVEEAIIPGVLASRNVPFVLVDRYLAHQGQYVEVQVPASRLKDARQALADAKKVGKVLNF
Ga0210403_1000328514	3300020580	Soil	MSNREELVVFMTLPLGVEESIIPGVLASRGIPVHLSERYLARQGRYVEIQVPASRLEDARQALDDAKRVGEQLETGNEG
Ga0210399_101913863	3300020581	Soil	MSNREELVVFMTLPLGVEESIIPGVLASRGIPVHLSERYLARQGRYVEIQVPASRLEDARQALDDAKRVGEQLETGDEG
Ga0210401_100046519	3300020583	Soil	MSNQEELVVFMTLPFGVDESIIPGVLASRGIPVHLSERYLARQGRYVEIQVPASRLEDAWRALDDAKRVGEQL
Ga0210401_100312173	3300020583	Soil	MTLPLGVEESIIPGVLASRGIPVHLSERYLARQGRYVEIQVPASRLDDARQALDDAKRVGEQLETGDEG
Ga0210401_102419673	3300020583	Soil	LPDSDELVIFMTLPVGVDELIIPGVLASRDIPVHLTERYFARQGRYVEIRVPASRLEDARRALDDAKRVGEKLDSGTEV
Ga0210404_102127471	3300021088	Soil	MPNPDELVVFMTLPVGVDESIIPGVLASRGIPFNLSERFLARQGRYVEIQVPASRLEDARQALDDAKRVGEQLK
Ga0210406_103738193	3300021168	Soil	MSDQEELVVFMTLPFGVEESIIPGVLASRGIPVHLSERYLARQGRYVEIQVPASRLEDARQALDD
Ga0210406_108331761	3300021168	Soil	MTLPLGVEESIIPGVLASRGIPVHLSERYLARQGRYVEIQVPASRLEDARQALDDAKRVGEQLETGDEG
Ga0210406_110536611	3300021168	Soil	MSNPEELVVFMTLPLGVDESIIPGVLASRGIPVHLSERRLARQGRYVEIQVPVSRLEDARRALEDAKRVGEQLKAENED
Ga0210400_1000126510	3300021170	Soil	MSNPEELIIFMTLPFGVDESIIPGVLTSRGIPVYLSERFLAHQGRYVEIRVPASRLEDARRALDDAKWVGENLNSESEV
Ga0210400_100229731	3300021170	Soil	MPDSEELVVFMTLERGVQEMLIPGVLVSRGIPFVLFDQHPARQRWYVEIKVPASRLEDARRALEDAKQFGESWTGKGMSRRCNVSR
Ga0210400_106329001	3300021170	Soil	MSDQEELVVFMTLPFGVEESIIPGVLASRGIPVHLSERYLARQGRYVEIQVPASRLEDARQALDDAKRVGAQLETGNEG
Ga0210405_100304745	3300021171	Soil	VIRGNLYPEADLANPDELVIFMTLPVGVDELIIPGVLASRDIPVHLTERYLARQGRYVEIRVPASRLEDARRALDDAKRVGENLDSNTEV
Ga0210405_110041641	3300021171	Soil	MPNPEELVTFMTLPYGVEEAIIPGVLASRDIPFFLFENHPAKQPWYVEIKVPASRLEDARRALADAKQIGELLDQKGNEI
Ga0210396_105400642	3300021180	Soil	MSNQEELVVFMTLPFGVDESIIPGVLASRGIPVHLSERYLARQGRYVEIQVPASRLEDAWRALDDAKRVG
Ga0210388_102073473	3300021181	Soil	VFMTLPFGVEESIIPGVLASRGIPVQVSERYLARQGRYVEIQVPASRLDDARRALEDAKRVGGQLKTGGED
Ga0210388_104000632	3300021181	Soil	MSNQEELVVFMTLPFGVEESIIPGVLASRGIPVQVSERYLARQGRYVEIQVPASRLDDARRALDDAKRIGGQLKTGNED
Ga0210388_105829592	3300021181	Soil	MHDSEEFVVFMTLEFGVDETVIPGVLASRGIPVFLTERYVARQRRYVEIKVPAARMEDARRALGRCKTSWGPHRSGT
Ga0210388_116370651	3300021181	Soil	MSHPDELVVFMTLPVGVDESIIPGVLASRGIPFKLSERYLARRGRYVEILVPASRLQDARNALDEAKQVGEELKSGNED
Ga0210385_100160831	3300021402	Soil	MPNPDELVVFMTLPVGVDESIIPGVLASRGIPFNLSERFLARQGRYVEIQVPASRLEDARQALDDAKRVGEQLKSGSEG
Ga0210385_103481802	3300021402	Soil	MSKQEELVVFMTLPFGVEESIIPGVLASRGIPVQVSERYLARQGRYVEIQVPASRLDDARRALEDAKRVGGQLTTGGED
Ga0210394_100036117	3300021420	Soil	LSNSDELVLFMTLPVGVDELIVPGVLASRDIPVHLTERYFARQGRYVEIRVPASRLEDARRALDDAKLVGEKLDSDTEV
Ga0210391_100455234	3300021433	Soil	MSKQEELVVFMTLPFGVEESIIPGVLASRGIPVQVSERYLARQGRYVEIQVPASRLDDARRALEDAKRVGGQLKTGGED
Ga0210390_104412012	3300021474	Soil	MTLPRGVEEAIIPGVLASRNVPFVLVDRYLAHQGQYVEVQVPASRLKDARQALADAKKVGKVLNF
Ga0210392_103994351	3300021475	Soil	MSNPEELVVCMTLPVGADESIIPGVLASRGIPVHLSERRLARQGRNVEIQVPASRLEDARRALDDAKWVGEQLKAEYEG
Ga0210398_101395184	3300021477	Soil	MSNSEELVVFMTLPRGVDESIIPGVLAGRGIPVYLSERYLGHLGQYVEIQVPASRLEDARRALEDAKLV
Ga0210398_110626092	3300021477	Soil	MSKQEELVVFMTLPFGVEESIIPGVLASRGIPVQVSERYLARQGRYVEIQVPASRLDDARRALEDAKRVGGQLKTGGE
Ga0242642_10252762	3300022504	Soil	MADSNELVVFMTLPRGVEEAIIPGVLASRNVPFVLVDRYLAHQGQCVEVQVPASRLKDARQALADAKKVGKVLNF
Ga0242657_12130451	3300022722	Soil	MADSNELVVFMTLPRGVEEAIIPGVLASRSVPFVLVDRYLAHQGQYVEVQVPASRLKDARQALADAKKVGKVLNF
Ga0224562_10004732	3300022733	Soil	MSNQDELVVFMALPFGVEESIIPGVLASRGIPVHLSERYLARQGRYVEIQIPASRLEDARQALDDAKRVGKQLETGNEGRRGTLRHD
Ga0224564_10429211	3300024271	Soil	MSNQDELVVFMTLPFGVEESIIPGVLASRGIPVHLSERYLARQGRYVEIQIPASRLEDARQALDDAKRVGKQLETGNEGRRGTLRHD
Ga0224564_11379131	3300024271	Soil	MSNQEELVVFMTLPLGVEESIIPGVLASRGIPVHLSERYLARQGRYVEIQVPASRLEDARRALDDAERVGEQLETGNQD
Ga0207684_103107192	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MSNPEELVIFMTLPVGVDELIIPGVLASRDIPVHLTERYFARQGRYVEIRVPASRLEDARRALDDAKRVGETLDSGTEV
Ga0257146_10654181	3300026374	Soil	MSNPDELVLFMTLRQGVDVLIIPGVLASRDIPVHLTERYFARQGRYLEIRVPASRLEDARRALDEAKKVGESLSSDTEV
Ga0257156_11331431	3300026498	Soil	SVAKHSAMSNPDELVLFMTLRQGVDVLIIPGVLASRDIPVHLTERYFARQGRYLEIRVPASRLEDARRALDEAKKVGESLSSDTEV
Ga0209010_100017610	3300027370	Forest Soil	MTLPFGVEESIIPGVLASRGIPVHVSERYLARQGRYVEIQVPASRLDDARRALDEAKRVGGQLKTGNED
Ga0209218_10349882	3300027505	Forest Soil	MSNQEELVVFMTLPFGVEESIIPGVLASRGIPVQVSERYLARQGRYVEIQVPASRLEDARRALDDAKWVGEQLKAEYEG
Ga0209008_10054245	3300027545	Forest Soil	MPNPDELVVFMTLPLGVDESIIPGVLASRGIPFDLSERFLARQGRYVEIKVPASRLEDARRALDDAKQVGEQLNSRSED
Ga0209008_10273252	3300027545	Forest Soil	MSDQEQLVVFMTLPLGVEESIIPGVLASRGIPVQVSERYLARQGRYVEIQVPASRLDDARRALDDAKRIGGQLKTGNED
Ga0209115_10383432	3300027567	Forest Soil	MSNQEELVVFMTLPFGVEESIIPGVLASRGIPVQVSERYLARQGRYVEIQVPASRLDDARRALEDAKRVGGQLKTGGED
Ga0209221_10442782	3300027609	Forest Soil	MSHQEELVVFMTLPFGVDESIIPGVLASRGIPVHLSERYLARQGRYVEIQVPASRLDDARRALDAAKRVGGQLKTGCED
Ga0209333_10587881	3300027676	Forest Soil	MPNQEEFVVFMTLPFGVEESIIPGVLASRGIPVQVSERYLARQGRYVEIQVPASRLDDARRALDAAKRVGGQLKTGCED
Ga0209139_100179162	3300027795	Bog Forest Soil	MLDHEQLVVFMTLPFGVEESIIPGVLASRGIPVHLSERFLARQGRYVEIQVPASRLADARQALDDAKRVGKQLHNSGNAANHDFKG
Ga0209060_102048192	3300027826	Surface Soil	MSNSEEFVAFMTLPFGIEESIIPGVLASRGIPIQLQERYLARQGRYVVIQVPRSRLEDAKRALDDAKQVGDQMESEDKNNSPTEG
Ga0209274_102617612	3300027853	Soil	MPNPDELVVFMTLPVGVDESIIPGVLASRGIPFELSERYLARQGRYVEIQVPASRLEDARKALDDAKQVGKQLKAESEG
Ga0209275_103990512	3300027884	Soil	AISFSLRRIPRLKANMSNSEELVVFMTLPRGVDESIIPGVLAGRGIPVYLSERYLGHLGQYVEIQVPASRLEDARRALEDAKLVGEQMKSGSEE
Ga0209624_103319892	3300027895	Forest Soil	MSNREELVVFMTLPFGVEESIIPGVLASRGIPVQVSERYLARQGRYVEIQVPASRLDDARRALDDAKRDW
Ga0209006_100000402	3300027908	Forest Soil	MSDQEELVVFMTLPFGVEESIIPGVLASRGIPVHLSERFLARQGRYVEIQVPASRLEDARQALDDAKRVGEQLETGNEG
Ga0209006_101568203	3300027908	Forest Soil	VIPDSEELAVFMKLERGVEETLIPGVLTSRGIPVVLSEQHPARQPWYVEIKVPASRLEDARRALEDAKQVGKLMDQETDE
Ga0209526_101978761	3300028047	Forest Soil	MSDSNELVILMTLPVGVDEAVIPGVLASRGIPVFLSERYLARQGRYVEVQVPASRLEDARRALDDAKTVGEQLKLENED
Ga0302301_10104046	3300028731	Palsa	MSNPEELVVFMTLPVGIDETIIPGVLASRGIPVHLSERHLARQGRYVEIQVPASRLEDARRALEDAKRVGEQLKAENED
Ga0302230_100462231	3300028871	Palsa	MSNPEELVVFMTLPVGIDETIIPGVLASRGIPVHLSERHLARQGRYVEIQVPASRLEDARRALEDAKRVGEQLKAE
Ga0308309_100428593	3300028906	Soil	MSNPDELVVFMTLPVGVDESIIPGVLASRGIPFKLSERYLARQGRYVEIQVPASRLEDARQALDDAKRVGEQLKSESED
Ga0308309_110624731	3300028906	Soil	MSKQEELVVFMTLPFGVEESIIPGVLASRGIPVQVSERYLARQGRYVEIQVPASRLDDARRALEDAK
Ga0311338_104898453	3300030007	Palsa	MSNPEELVVFMTLPFGVDESIIPGVLASRGIPVHLSERRLARQGRYVEIQVPASRLEDARQALDDAKRVGE
Ga0265459_130774621	3300030741	Soil	MSNQEELVVFMTLPFGVEESIIPGVLASRGIPVQVSERYLARQGRYVEIQVPASRLDDARRALDDAKESKKK
Ga0265760_100071765	3300031090	Soil	MSNPDELVVFMTFPVGVDESIIPGVLASRGIPFNLSERYLARQGRYVEILVPASRLEDARKALDEAKQVGKQLRSGSEG
Ga0310686_1001734222	3300031708	Soil	MTLPFGVEESIIPGVLASRGIPVHLSERYLARQGRYVEIQIPASRLEDARQALDDAKRVGKQLETGNEGRRGTLRHD
Ga0310686_1067011132	3300031708	Soil	MSNQREFVVFMTLPRGVDESIIPGVLASRGIPVRLSERYLGRQGRYVEILVPASRLDDARRALDDAKGVGELLKSESEG
Ga0310686_1089709691	3300031708	Soil	MPDSEEFVVFMTLEFGVDETVIPGVLASRGIPVFLTERYVARQGRYVEIKVPAARMEDARRALGRCKTSWGPHRSGT
Ga0310686_1146947323	3300031708	Soil	MSHHEELVVFMTLPLGVEESIIPGVLASRGIPVHLSERYLARQGRYVEIQVPASRLQDARQALDDAKRVGEQLETGKEDRCGTLLEK
Ga0307476_103722751	3300031715	Hardwood Forest Soil	MSGLILCPEANMSDQEELVVFMTLPLGVDESIIPSVLASRGIPVHLSERYLARQGRYVEIQVPASRLQDARRALDDAKQVGEELSTEKED
Ga0307474_105656211	3300031718	Hardwood Forest Soil	MTLPVGVDELIVPGILASRDIPVQLTERYLARQGRYVEIRIPASRVEDAKRALDDAKRVGEDLDSDPEV
Ga0307474_109420761	3300031718	Hardwood Forest Soil	LENSDELVIFMTLPVGVDELIVPGILASRDIPVQLTERYFARQGRYVEIRVPASRLEDAKRALDDAKRVGESLNSDTEV
Ga0307474_110315701	3300031718	Hardwood Forest Soil	ELVVFMTLPLGVDESIIPSVLASRGIPVHLSERYLARQGRYVEIQVPASRLEDARRALDDAKQVGEELSTENED
Ga0307477_100022175	3300031753	Hardwood Forest Soil	MSNPDELVVFMTLPVGVDESIIPGVLASRGIPFKLSERYLARQGRYVEIQVPASRLEDARQALVDAKRVGEQLRSESED
Ga0307475_101178056	3300031754	Hardwood Forest Soil	LANPDELVVFMTLPVGVDELIIPGVLASRDIPVHLTERYFARQGRYVEIRVPALRLEDARRALDDAKRVGENLDSGTEV
Ga0307475_101704172	3300031754	Hardwood Forest Soil	MADSNELVVFMTLPRGVEEAIIPGVLASRNVPFVLVDRYLAHQGQYVEVQVPSSRLKDARQALADAKKVGKVLNF
Ga0307475_111837021	3300031754	Hardwood Forest Soil	MSNPDELVVFMTLPVGVDESIIPGVLTSRGIPVYLSERFLAHQGRYVEIRVPASRLEDARRALDDAKQVGEELSTEKED
Ga0307478_105046912	3300031823	Hardwood Forest Soil	MSGLILCPEANMSDQEELVVFMTLPLGVDESIIPSVLASRGIPVHLSERYLARQGRYVEIQVPASRLEDARRALDDAKQVGEELSTEKED
Ga0306926_105817331	3300031954	Soil	MTLSVGVDELIIPGVLVSRDIPVHLTERYFARQGRYLEIRVPTSRLEDARRALDDAKRVGENLDPGTEV
Ga0335080_101191664	3300032828	Soil	MSNEEEFVVFMTLPFGVDESIIPGVLASRGIPVHLSERYLARQGRYVEIQLPASRLEDARRALGDAKRVGEQLEAGNES
Ga0335080_103218292	3300032828	Soil	MSDPEELVLLMTLPFGVEESIIPGVLRSRGIPVFLSEGYLARQGRYVEIRVPASRVEDARRALDDAKRVGKQLESEGER
Ga0335077_100978473	3300033158	Soil	MSNEEELVVFMTLPFGVDESIIPGVLASRGIPFHLSERYLARQGRYVEIQVPASRLEDARRALADAKRVGEQLEAGNES
Ga0335077_101277161	3300033158	Soil	DMSDPEELVLLMTLPFGVEESIIPGVLRSRGIPVFLSERYLGRQGRYVEIRVPASRVEDARRALDDAKREGKQLESEGER
Ga0370515_0010751_3397_3636	3300034163	Untreated Peat Soil	MSNQEELVVFMTLPFGVEESIIPGVLVSRGIPVQVSERYLARQGRYVEIQVPASRLDDARRALDDAKRVGGQLKTGNED

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F058385

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences