Metagenome / Metatranscriptome Family F058468

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F058468
Family Type	Metagenome / Metatranscriptome
Number of Sequences	135
Average Sequence Length	85 residues
Representative Sequence	QLRWKEQSLEFEKTKRGWVMSPIQEAAYVKREVALQVLSARLAELAQNTDATPEQEREQKQIIRFLNLLVTDDSSAASAQSN
Number of Associated Samples	107
Number of Associated Scaffolds	135

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	1.63 %
% of genes near scaffold ends (potentially truncated)	90.37 %
% of genes from short scaffolds (< 2000 bps)	86.67 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (58.519 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (22.963 % of family members)
Environment Ontology (ENVO)	Unclassified (37.778 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.630 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 39.09% β-sheet: 10.91% Coil/Unstructured: 50.00%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.53
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.53
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 135 Family Scaffolds
PF00196	GerE	3.70
PF04685	DUF608	2.96
PF01841	Transglut_core	2.22
PF00078	RVT_1	1.48
PF02566	OsmC	1.48
PF02583	Trns_repr_metal	1.48
PF01381	HTH_3	1.48
PF01878	EVE	1.48
PF08570	DUF1761	1.48
PF00106	adh_short	0.74
PF13561	adh_short_C2	0.74
PF00149	Metallophos	0.74
PF00092	VWA	0.74
PF14110	DUF4282	0.74
PF07681	DoxX	0.74
PF16576	HlyD_D23	0.74
PF04193	PQ-loop	0.74
PF08388	GIIM	0.74
PF01850	PIN	0.74
PF04238	DUF420	0.74
PF13655	RVT_N	0.74
PF00990	GGDEF	0.74
PF00069	Pkinase	0.74
PF00753	Lactamase_B	0.74
PF12704	MacB_PCD	0.74
PF07883	Cupin_2	0.74
PF01137	RTC	0.74
PF03466	LysR_substrate	0.74
PF11954	DUF3471	0.74

COG ID	Name	Functional Category	% Frequency in 135 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	2.96
COG4354	Uncharacterized conserved protein, contains GBA2_N and DUF608 domains	Function unknown [S]	2.96
COG1673	Predicted RNA-binding protein, contains PUA-like EVE domain	General function prediction only [R]	1.48
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	1.48
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	1.48
COG1937	DNA-binding transcriptional regulator, FrmR family	Transcription [K]	1.48
COG2947	Predicted RNA-binding protein, contains EVE domain	General function prediction only [R]	1.48
COG0430	RNA 3'-terminal phosphate cyclase	RNA processing and modification [A]	0.74
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	0.74
COG2322	Cytochrome oxidase assembly protein CtaM/YozB, DUF420 family	Posttranslational modification, protein turnover, chaperones [O]	0.74
COG4270	Uncharacterized membrane protein	Function unknown [S]	0.74

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.52 %
All Organisms	root	All Organisms	41.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.52 %
cellular organisms	root	All Organisms → cellular organisms	41.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.52 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	41.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.52 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	17.04 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.70 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.52 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	10.37 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.48 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.74 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.74 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.74 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.52 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.37 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	0.74 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.74 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.74 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.74 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.52 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.37 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.74 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.74 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.74 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.74 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.52 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.37 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.74 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.74 %
Sorangiineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae	0.74 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.74 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.52 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.37 %
Labilitrichaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Labilitrichaceae	0.74 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.74 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.74 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.74 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.52 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.37 %
Labilithrix	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Labilitrichaceae → Labilithrix	0.74 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.74 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.74 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.74 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.52 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.37 %
Labilithrix luteola	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Labilitrichaceae → Labilithrix → Labilithrix luteola	0.74 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.74 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.74 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.74 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.74 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459013\|GO6OHWN02HX279	Not Available	521	Open in IMG/M
2228664022\|INPgaii200_c1139328	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	8863	Open in IMG/M
3300000789\|JGI1027J11758_12776752	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1314	Open in IMG/M
3300005332\|Ga0066388_107354333	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	553	Open in IMG/M
3300005436\|Ga0070713_101016997	All Organisms → cellular organisms → Bacteria	800	Open in IMG/M
3300005447\|Ga0066689_10942994	Not Available	532	Open in IMG/M
3300005468\|Ga0070707_100308275	All Organisms → cellular organisms → Bacteria → Proteobacteria	1538	Open in IMG/M
3300005548\|Ga0070665_101321138	Not Available	731	Open in IMG/M
3300005555\|Ga0066692_10972223	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300005558\|Ga0066698_10760153	Not Available	632	Open in IMG/M
3300005610\|Ga0070763_10455186	Not Available	727	Open in IMG/M
3300005921\|Ga0070766_10676109	Not Available	697	Open in IMG/M
3300006163\|Ga0070715_10903142	Not Available	544	Open in IMG/M
3300006173\|Ga0070716_100204593	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	1315	Open in IMG/M
3300006176\|Ga0070765_100374244	All Organisms → cellular organisms → Bacteria	1327	Open in IMG/M
3300006358\|Ga0068871_101115201	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	738	Open in IMG/M
3300006871\|Ga0075434_101277059	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300006904\|Ga0075424_102745038	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300007258\|Ga0099793_10495990	Not Available	607	Open in IMG/M
3300009012\|Ga0066710_100257541	All Organisms → cellular organisms → Bacteria	2529	Open in IMG/M
3300009137\|Ga0066709_100115255	All Organisms → cellular organisms → Bacteria	3340	Open in IMG/M
3300009137\|Ga0066709_100626805	All Organisms → cellular organisms → Bacteria	1536	Open in IMG/M
3300009143\|Ga0099792_10616264	Not Available	693	Open in IMG/M
3300009143\|Ga0099792_11141197	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300009148\|Ga0105243_11840707	Not Available	637	Open in IMG/M
3300009792\|Ga0126374_11726167	Not Available	521	Open in IMG/M
3300010046\|Ga0126384_11443663	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	643	Open in IMG/M
3300010304\|Ga0134088_10483569	Not Available	609	Open in IMG/M
3300010329\|Ga0134111_10288340	Not Available	682	Open in IMG/M
3300010335\|Ga0134063_10237114	Not Available	865	Open in IMG/M
3300010359\|Ga0126376_10152634	All Organisms → cellular organisms → Bacteria → Acidobacteria	1852	Open in IMG/M
3300010376\|Ga0126381_100834745	All Organisms → cellular organisms → Bacteria	1324	Open in IMG/M
3300011270\|Ga0137391_10491874	Not Available	1039	Open in IMG/M
3300011270\|Ga0137391_11023526	Not Available	671	Open in IMG/M
3300012199\|Ga0137383_10813490	Not Available	682	Open in IMG/M
3300012202\|Ga0137363_10539320	Not Available	982	Open in IMG/M
3300012209\|Ga0137379_11711647	Not Available	525	Open in IMG/M
3300012363\|Ga0137390_11550902	Not Available	602	Open in IMG/M
3300012683\|Ga0137398_11197089	Not Available	519	Open in IMG/M
3300012685\|Ga0137397_10265291	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1279	Open in IMG/M
3300012685\|Ga0137397_10681160	Not Available	764	Open in IMG/M
3300012922\|Ga0137394_11423477	Not Available	553	Open in IMG/M
3300012923\|Ga0137359_10346219	All Organisms → cellular organisms → Bacteria	1321	Open in IMG/M
3300012927\|Ga0137416_12116012	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300012929\|Ga0137404_11201331	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300012930\|Ga0137407_11778774	Not Available	587	Open in IMG/M
3300012971\|Ga0126369_11807158	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300015053\|Ga0137405_1088133	All Organisms → cellular organisms → Bacteria	1546	Open in IMG/M
3300015264\|Ga0137403_10346443	All Organisms → cellular organisms → Bacteria	1373	Open in IMG/M
3300015373\|Ga0132257_103590067	Not Available	564	Open in IMG/M
3300015374\|Ga0132255_101287483	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1102	Open in IMG/M
3300016270\|Ga0182036_10243702	All Organisms → cellular organisms → Bacteria → Proteobacteria	1342	Open in IMG/M
3300016319\|Ga0182033_10644952	Not Available	923	Open in IMG/M
3300016387\|Ga0182040_10857570	Not Available	751	Open in IMG/M
3300016445\|Ga0182038_10193566	All Organisms → cellular organisms → Bacteria	1594	Open in IMG/M
3300016445\|Ga0182038_12029709	Not Available	521	Open in IMG/M
3300020579\|Ga0210407_10273672	All Organisms → cellular organisms → Bacteria → Acidobacteria	1317	Open in IMG/M
3300020579\|Ga0210407_10519735	Not Available	930	Open in IMG/M
3300020581\|Ga0210399_10066195	All Organisms → cellular organisms → Bacteria	2921	Open in IMG/M
3300020581\|Ga0210399_10906588	Not Available	715	Open in IMG/M
3300021168\|Ga0210406_10360942	All Organisms → cellular organisms → Bacteria	1170	Open in IMG/M
3300021168\|Ga0210406_11010333	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300021180\|Ga0210396_11161720	Not Available	648	Open in IMG/M
3300021401\|Ga0210393_11280118	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	588	Open in IMG/M
3300021402\|Ga0210385_10213494	Not Available	1407	Open in IMG/M
3300021433\|Ga0210391_10618655	Not Available	850	Open in IMG/M
3300021433\|Ga0210391_10854774	Not Available	710	Open in IMG/M
3300021475\|Ga0210392_10182059	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1457	Open in IMG/M
3300021475\|Ga0210392_10432534	All Organisms → cellular organisms → Bacteria	963	Open in IMG/M
3300021478\|Ga0210402_10597006	Not Available	1023	Open in IMG/M
3300021479\|Ga0210410_10066866	All Organisms → cellular organisms → Bacteria	3146	Open in IMG/M
3300021479\|Ga0210410_11037585	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	709	Open in IMG/M
3300021560\|Ga0126371_11689353	Not Available	757	Open in IMG/M
3300021560\|Ga0126371_12441683	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Labilitrichaceae → Labilithrix → Labilithrix luteola	632	Open in IMG/M
3300024251\|Ga0247679_1019376	All Organisms → cellular organisms → Bacteria	1157	Open in IMG/M
3300024290\|Ga0247667_1041197	Not Available	869	Open in IMG/M
3300024325\|Ga0247678_1033258	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	811	Open in IMG/M
3300025910\|Ga0207684_10464460	All Organisms → cellular organisms → Bacteria → Proteobacteria	1086	Open in IMG/M
3300025915\|Ga0207693_10228028	Not Available	1463	Open in IMG/M
3300025915\|Ga0207693_10400376	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1073	Open in IMG/M
3300025916\|Ga0207663_10332946	All Organisms → cellular organisms → Bacteria → Acidobacteria	1144	Open in IMG/M
3300025922\|Ga0207646_10683326	Not Available	918	Open in IMG/M
3300026374\|Ga0257146_1036206	Not Available	801	Open in IMG/M
3300026475\|Ga0257147_1068795	Not Available	541	Open in IMG/M
3300026557\|Ga0179587_10307480	Not Available	1023	Open in IMG/M
3300027460\|Ga0207506_1001893	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1488	Open in IMG/M
3300027512\|Ga0209179_1051725	Not Available	882	Open in IMG/M
3300027853\|Ga0209274_10295321	All Organisms → cellular organisms → Bacteria	832	Open in IMG/M
3300027879\|Ga0209169_10405454	Not Available	717	Open in IMG/M
3300027903\|Ga0209488_10409975	Not Available	1002	Open in IMG/M
3300028047\|Ga0209526_10864538	All Organisms → cellular organisms → Bacteria → Acidobacteria	553	Open in IMG/M
3300028146\|Ga0247682_1086723	Not Available	578	Open in IMG/M
3300028536\|Ga0137415_10217622	All Organisms → cellular organisms → Bacteria	1725	Open in IMG/M
3300028536\|Ga0137415_10859907	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300029636\|Ga0222749_10489125	Not Available	664	Open in IMG/M
3300031057\|Ga0170834_101551901	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	573	Open in IMG/M
3300031057\|Ga0170834_105966626	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	640	Open in IMG/M
3300031057\|Ga0170834_111897765	Not Available	555	Open in IMG/M
3300031057\|Ga0170834_112618566	Not Available	505	Open in IMG/M
3300031057\|Ga0170834_113621971	Not Available	817	Open in IMG/M
3300031057\|Ga0170834_113623281	Not Available	756	Open in IMG/M
3300031128\|Ga0170823_10691970	Not Available	511	Open in IMG/M
3300031231\|Ga0170824_108216634	Not Available	631	Open in IMG/M
3300031231\|Ga0170824_119240734	All Organisms → cellular organisms → Bacteria → Acidobacteria	1426	Open in IMG/M
3300031474\|Ga0170818_104149953	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	687	Open in IMG/M
3300031573\|Ga0310915_10761114	Not Available	682	Open in IMG/M
3300031718\|Ga0307474_10318752	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1199	Open in IMG/M
3300031719\|Ga0306917_11321922	Not Available	557	Open in IMG/M
3300031744\|Ga0306918_11089013	Not Available	619	Open in IMG/M
3300031753\|Ga0307477_10967229	Not Available	560	Open in IMG/M
3300031823\|Ga0307478_10083354	All Organisms → cellular organisms → Bacteria	2445	Open in IMG/M
3300031823\|Ga0307478_10699566	Not Available	849	Open in IMG/M
3300031845\|Ga0318511_10286680	Not Available	743	Open in IMG/M
3300031941\|Ga0310912_10794877	All Organisms → cellular organisms → Bacteria → Acidobacteria	731	Open in IMG/M
3300031942\|Ga0310916_11281707	Not Available	604	Open in IMG/M
3300031947\|Ga0310909_10930082	Not Available	713	Open in IMG/M
3300031962\|Ga0307479_10819908	All Organisms → cellular organisms → Bacteria → Acidobacteria	905	Open in IMG/M
3300031962\|Ga0307479_11646691	Not Available	596	Open in IMG/M
3300032121\|Ga0316040_112998	Not Available	598	Open in IMG/M
3300032180\|Ga0307471_104096169	Not Available	515	Open in IMG/M
3300032205\|Ga0307472_101446300	Not Available	669	Open in IMG/M
3300032205\|Ga0307472_101986991	Not Available	582	Open in IMG/M
3300033289\|Ga0310914_10416560	Not Available	1216	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.81%
Host-Associated	Host-Associated	5.19%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.81%
Plants	Host-Associated → Plants	5.19%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.81%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.96%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.48%
Roots	Host-Associated → Plants → Roots	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	80.00%
Loam	Environmental → Terrestrial → Soil → Loam	14.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.22%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.48%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.74%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.74%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	42.96%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.63%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.15%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.22%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.48%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.74%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	22.96%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	18.52%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.15%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	7.41%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	6.67%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.93%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	5.19%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.70%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.22%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.22%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.48%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.48%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.48%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.74%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.74%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459013	Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO 1O1 lysis soil at the rocks surface 0-21cm	Environmental	Open in IMG/M
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024251	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK20	Environmental	Open in IMG/M
3300024290	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK08	Environmental	Open in IMG/M
3300024325	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK19	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026374	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-A	Environmental	Open in IMG/M
3300026475	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-A	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027460	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-ROWE17-C (SPAdes)	Environmental	Open in IMG/M
3300027512	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028146	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK23	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032121	Soil microbial communities from Bohemian Forest, Czech Republic ? CSA3 metaT (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
N57_06920470	2170459013	Grass Soil	VQIKGKRGTALVRIESLAAPADTQTGSQLRWKEESLEFEKTKRGWVMSPLKNAAYLNREVALRVLSVRLADLAKNTDATPEQDREQTQIIRLLNLLVIDNSA
INPgaii200_11393289	2228664022	Soil	KTKRGWVISPIQDAAYIKSEVALKVLSARLAELSKNTDATPAQEREQRQIIRFLNSLLTDDSSTASAQSN
JGI1027J11758_127767521	3300000789	Soil	KRGWVISPIQDAAYIKSEVALKVLSARLAELSKNTDATPAQEREQRQIIRFLNSLLTDDSSTASAQSN*
Ga0066388_1011675373	3300005332	Tropical Forest Soil	LVSIESLGTLPDSQAGSQPVWKDESLEFEKTKRGWVMSPVKEAVYVSREVALQLLSARLAELTQNTNTTAAQEREQKQIIRFLNTLLTDNSPESAQNN*
Ga0066388_1073543332	3300005332	Tropical Forest Soil	EFEKTKKGWVMNSVQETAYVPREVALQALSARLAELAQNSAATMEQEREQKEIIRFLGLLVSEDSKAVSAQSN*
Ga0070713_1010169971	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	EQSLEFEKTKRGWVMSPIQEAAYVKREVALQVLSARLAELAQKTDTTPEQEREQKQIIRFLNLLVGDDSSAESAQSN*
Ga0066689_109429942	3300005447	Soil	SFGAPADRQTGSQLHWKEQPVEFEKTKRGWEMSRIQDISYVKREVALQVLSTRLAELAQNTDASPEQEREQKQIIRLLNLLITDDSNATSAQSH*
Ga0070707_1003082751	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	GWVMSPIQEAAYVKREVALQVLSARLAELAQNTDATPEQEREQKQIIRLLNLLVTDDFSAASAQSN*
Ga0070665_1013211381	3300005548	Switchgrass Rhizosphere	RGTAVLQIESLGAPSDTQTGSQFRWNEQSLEFQKTKRGWVMSPIRDAVYVKREVALRVLSARLAELAQNTNATPGQEREQQQIIRLLNLLVIETARQ*
Ga0066692_109722232	3300005555	Soil	LRWKEQSLEFEKTKRGWVMSPIQEAAYVKREVALQVLSARLAELAQNTDATPEQEREQKQIIRLLNLLVTDDFSAASAQSN*
Ga0066698_107601531	3300005558	Soil	WKEQPLQLEKTKRGWVMSPIREAAYVKREVALQVLSARLAELAQNTDATPEQEREQKQIIRFLNLLVTDDSGAASAQSN*
Ga0070763_104551862	3300005610	Soil	RWKEQSLEFEKTKRGWVMSPIQEAAYVKREVALQVLSARLAELAQNTEATPEQEREQKQIIRFLNLLVTDDANPASAQSN*
Ga0070766_101142491	3300005921	Soil	GWVMSPIQEAAYVQREVALQVLSTRLAELAQNTDATPELEREQKQIIRFLNLLVTDDSNAASAQSN*
Ga0070766_106761092	3300005921	Soil	KEQSLEFEKTKRGWVMSPIQEAAYVQREVALQVLSARLAELAQNADATPEQEREQKQIIRFLNLLVTDDSNAASVQSN*
Ga0070715_109031421	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	GKRGTALVRIESLGVLGDVQIGSQLRWREQSLDLEKTKRGWVMSPIQDAAYVNREVAMKVLSARLADLAKNTDTTPQQEREQKQIILFLNLLVTNDSTTPSAE*
Ga0070716_1002045933	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	LGWNEQSLEFEKTKRGWVMNPIQDAAYVKREVALQVLSARLAELTQNTDATPEQEREQKRIVRLLNLLVTDDSSAASTQSH*
Ga0070765_1003742441	3300006176	Soil	GSQLRWKEQSLEFEKTKRGWVMSPIQEAAYVKREVALQVLSARLAELAQNTDASAEQEREQKQIIRFLNLLVTDDSNAASAQSN*
Ga0068871_1011152011	3300006358	Miscanthus Rhizosphere	GKRGTALVRIESLAAPADTQTGSQLRWREESLEFQKTKRGWVMSPLKDAAYVNREVALRVLSVRLADLAKNTDATPEQEREQTQIIRFLNLLVIDNSATSSAQNN*
Ga0075434_1012770592	3300006871	Populus Rhizosphere	TLVIEKTKRGWVMSPNEDVAYIKREVALQILSARLARLAQNTDPTPAQKADQKEVIRLLNWLVVDRSPSVSAESN*
Ga0075424_1027450381	3300006904	Populus Rhizosphere	EKTKRGWVMSPVQEVAYVSREVALQVLSARLADLAQNTSTTPAQEREQKQIIRFLNTLIPDSSRAESAQSN*
Ga0099793_104959902	3300007258	Vadose Zone Soil	QAHWKEQSLEFEKTKRGWVMSPVQEAAYVKREVALQVLSARLAGLARNTDATPEQEREQKQIIRFLNLLVTDDSRAASAQSN*
Ga0066710_1002575411	3300009012	Grasslands Soil	LRWKEQSLEFEKTKRGWVMSPIREAAYVKREVALQVLSARLAELAQNTDATPEQEREQKQIIRLLNLLVTDDFSAASAQSN
Ga0066709_1001152551	3300009137	Grasslands Soil	KEQSLEFEKTKRGWVMSPIQEAAYVKREVALQVLSARLAELAQNTDATPEQEREQKQIIRFLNLLVTDDSSAASVQSN*
Ga0066709_1006268052	3300009137	Grasslands Soil	KEQSLEFEKTKRGWVMSPIQEAAYVKREVALQVLSARLAELAQNTDATPEQEREQKQIIRLLNLLVTDDFSAASAQSN*
Ga0099792_106162642	3300009143	Vadose Zone Soil	KEQSLEFEKTKRGWVMSSIQETAYVKREVALQVLSARLAELAQNTDATPEQEREQKQIIRFLNLLVTDDSSAASAQSN*
Ga0099792_111411971	3300009143	Vadose Zone Soil	QSLEFEKTKRGWVMSSIQETAYVKREVALQVLSARLAELAQNTDTTPEQEREQKQIIRLLNLLVTDDSSAASAQSDAKSEELEVH*
Ga0105243_118407071	3300009148	Miscanthus Rhizosphere	FEKTKRGWVVSPIRDAVYVKREVALRVLSARLAELAQNTNATPGREREQQQIVRLLNLLVIETAGQ*
Ga0126374_117261671	3300009792	Tropical Forest Soil	ESLATLPSAQTGSRPRWREESLEFEKTKRGWVMSPVEEVTYVSREGALQSLSARLAELAKNTNATLDQEREQKQIIRFLNLLMPEDPTATSAQSN*
Ga0126380_104824402	3300010043	Tropical Forest Soil	VSIESLGTLPDLYEGAQTRWNEESLEFEKTKRGWVMSPVQEVVYVSREGAMQVLSARLAELAQNTSTTPAQKQEQKQIIRFLNTLIPDNSRAESAQSN*
Ga0126384_114436632	3300010046	Tropical Forest Soil	HWKEESLEFEKTKRGWVMSPVREVSYVSREGAMQGLSARLAELAQNSITTPAQEREQKQIIRFLNSLIPDTSRAESAQSN*
Ga0134088_104835692	3300010304	Grasslands Soil	EFEKTKRGWVMSPIQEAAYVKREVALQVLSARLAELAQNTDTSPEQEREQKQIIRFLNLLVTDDSGAASAQSN*
Ga0134111_102883402	3300010329	Grasslands Soil	WKEQSLEFEKTKRGWVMSPIQEAAYVKREVALQVLSARLAELAQNTDATPEQEREQKQIIRLLNLLVTDDFSAASAQSN*
Ga0134063_102371141	3300010335	Grasslands Soil	ALVRIESLGTPPDTQTAPQLRWHEQSLEFAKTKRGWVMSSIQDAAYVKREVALQVLSARLAELTQNTDASPEQEREQKQIIRLLDLMITDDSSAASAQSQ*
Ga0126376_101526341	3300010359	Tropical Forest Soil	TKTGWVMSPLEEVTYVSREVALQSLSARLAELARNTNATFEQEREQKQIIRFLNLLMPDDPNATAAQSN*
Ga0126378_115228661	3300010361	Tropical Forest Soil	LPDSQEGAQPRWKEESLEFEKTKRGWVIRPVQEVAYVSREGAMQVLSARLAELAQNTSTTPAHDREQQQIIRFLNTLIPDNSRAESAQGN*
Ga0126377_116310231	3300010362	Tropical Forest Soil	ALVSIESLGTLPDLYEGAQTRWNEESLEFEKTKRGWVMSPVQEVAYVSREGAMQVLSARLAELAQNTSTTPALDREQKQIIRFLNTLVPDNPRAESAQSN*
Ga0126381_1008347452	3300010376	Tropical Forest Soil	SLEFEKTKRGWVMSPVQEVAYVSREGAMQVLSARLAELAQNTSTTPAQEREQKQIILFLNTLIPNNSRAESAQSN*
Ga0126383_133597822	3300010398	Tropical Forest Soil	SIESLGTLPDSYEGAQPRWKEESLEFEKTKRGWVISPVQEVAYVSREGAMQVLSARLAELAQNTSTTPAQEREQKQIIRFLNTLIPDNSRAESAQGN*
Ga0150983_113187891	3300011120	Forest Soil	WVMSPIQEAAYVKREVALQALSARLAELAQNTDTTPEQEREQKQIIRFLNLLVTDDSNAASAQSN*
Ga0137391_104918741	3300011270	Vadose Zone Soil	LVRIESLGAPPNMQTDSQRRWKEQSLEFEKTKRGWVMSPIQEAAYVKREVALQVLSARLAELAQNTDATPEQEREQKQIIRFLNLLVTDDSSAASAQSN*
Ga0137391_110235262	3300011270	Vadose Zone Soil	LVRIESLGAPPNMQTDSQRRWKEQSLEFEKTKRGWVLSPIQEAAYVKREVALQVLSARLAELAQNTDATPEQEREQKQIIRFLNLLVIDDSSAASAQSN*
Ga0137383_108134901	3300012199	Vadose Zone Soil	IESLGAPADRQTGSQPHWNGQPLEFEKTKRGWEMSPIQDISYVKREVALQVLSARLAELTKNADASPEQEREQKQIIRLLNLLITDDSSAASAQSQ*
Ga0137363_105393201	3300012202	Vadose Zone Soil	ESLGAPWNTQTGTRLRWKEQSLEFEKTKRGWVMSSIQETAYVKREVALQVLSARLAELAQNTNATPEQERQQKQIIRFLNLLVTDDSSAASAQSN*
Ga0137379_117116471	3300012209	Vadose Zone Soil	EQSLEFEKTKRGWVMSPIQEAAYVKREVALQVLSARLAELAQNTDTSPEQEREQKQIIRLLNLLVTDDSGAASAQSN*
Ga0137390_102864002	3300012363	Vadose Zone Soil	MSPIQEAAYVKREVALQVLSARLAELAQNTDATREQEREQKQIIRFLNLLVTDDSSAASAQSN*
Ga0137390_115509021	3300012363	Vadose Zone Soil	ALVWIESLGAPPNMQTDSQRRWKEQSLEFEKTKRGWVLSPIQEAAYVKREVALQVLSARLAELAQNTDATPEQEREQKQIIRFLNLLVIDDSSAASAQSN*
Ga0137398_111970891	3300012683	Vadose Zone Soil	MQTDSPRRWKEQSLEFEKTKRGWVMSPVQEAAYVRREVALQVLSARLAELAQNTDATPEQEREQKQIIRFLNLLVTDDSSAASAQSN*
Ga0137397_102652911	3300012685	Vadose Zone Soil	KRGWEMSPIQDISYVKREVALQVLSARLAELAQNTDASLEQEREQKQIIRLLNLLITDDPNATSAQSH*
Ga0137397_106811601	3300012685	Vadose Zone Soil	KTKRGWVMSRIQEAAYVKREVALQALSARLAELAQSTDASLEQEREQKQIIRLLNLLVTDDFSAASAQNN*
Ga0137394_114234771	3300012922	Vadose Zone Soil	QPRWQEQSLEFEKTKRGWVMNPIQEAAYVKREVALQVLSARLAELARNTDTTPEQEREQKQIIRFLNLLVTDDSSAASAQSN*
Ga0137359_103462193	3300012923	Vadose Zone Soil	VRIESLGAPPNTQTDPQLRWKEQSLEFEKTKRGWVMSPIQEAAYVKREVALQVLSARLAELAQNTDITPEQEREQKQIIRFLNLLVADDSSAASAQSN*
Ga0137416_121160122	3300012927	Vadose Zone Soil	PPKMQTDSQRRWKEQPLEFEKTTRGWVMSPIQEAAYVKREVALQVLSARLAELAQNTDATPEQEREQKQIIRLLNLLVTEDSSATSAQSN*
Ga0137404_112013312	3300012929	Vadose Zone Soil	QEQSLEFEKTKRGWVMSPIQEAAYLKREVALQVLSARLAELAQNADATPEQEREQKQIIRFLNLLVTDDSSAASAQSN*
Ga0137407_117787742	3300012930	Vadose Zone Soil	QIESFGAPADRQTGSQPHWKEQPLEFEKTKRGWEMSPIQDVSYVKREVALQVLSARLAEITQNTDARPEQEREQKQIIRLLNLLITDDSSAASAQSH*
Ga0126369_118071581	3300012971	Tropical Forest Soil	KEASLEFEKTKRGWVMSPAPEVAYISREGAMLALSARLAELAQNANTTAAQEREQKQIIRFLNTLIPDNSRAESAQSN*
Ga0137405_10881332	3300015053	Vadose Zone Soil	APPNTQTGSQLRWKEQSLEFEKTKRGWVMSPIQEAAYVKREVALQVLSARLAELAQNTDATPEQECEQKQIIRLLNLLVTDDFSAASAQSN*
Ga0137403_103464432	3300015264	Vadose Zone Soil	QEQSLEFEKTKRGWVMSPIQEAAYLKREVALQVLSARLAELAQNADATPEQEREQKQIIRFLNLLVTDDSGAASAQSN*
Ga0132257_1035900672	3300015373	Arabidopsis Rhizosphere	GSQLRWKEQSLEFEKTKRGWVMRPIKDTAYVQREVALQVLSARLSDLAKNRDATPQQEREQRQIIRLLNLLVTDNSSTRSAQSN*
Ga0132255_1012874831	3300015374	Arabidopsis Rhizosphere	SLDLEKTKRGWVMSPVQDAAYVNREVAMKVLSARLADLAKNTDTTPQQEREQKQIILFLNLLVTNDSTTPSAE*
Ga0182036_102437021	3300016270	Soil	RGWIVSPLKDAAYVNREVALRVLSVRLADLAKNTDATPEQEREQTQIIRFLNLLVIDNSATAWHRVIDRLGD
Ga0182033_100963371	3300016319	Soil	IESLGTLPDSYAHAQPRWKEESLEFEKTKRGWVISSVQEVAYVSREGAMQVLSARLAELAQNTSTTPAQEQEQKQIIHFLSTLIPDNSRAESAQSN
Ga0182033_106449521	3300016319	Soil	KGGWVMSPVNDAAYVKGEVALQVLSSRLADLAKNIDATPEQEREERQIIRLLNLLVTDNSSTASAQSN
Ga0182040_108575702	3300016387	Soil	TQTGSQLRWREESLEFEKTKRGWVMSPLKDAAYVNREVALRVLSVRLADLAKNTDATPEQEREQTQIIRFLNLLVIDNSATASAPSN
Ga0182038_101935661	3300016445	Soil	KTKRGWVISPVQEVAYVSREGAMQVLSARLAELAQNTSTTPAQEQEQKQIIHFLSTLIPDNSRAESAQSN
Ga0182038_120297092	3300016445	Soil	LVRIESLAAPADTQAGSQLRWREESLRFEKTKRGWIVSPLKDAAYVNREVALRVLSVRLADLAKNTDATPEQEREQTQIIRFLNLLVIDNSATASPQSN
Ga0210407_102736722	3300020579	Soil	MDSQLRWKEQSLELEKTKRGWVMSSIQEAAYLKREVALQVLSARLAELVRNTDGTPEQEREQKQIIRFLNLLVTDDSSAASAQSN
Ga0210407_105197351	3300020579	Soil	RGKRGTALVRIESLAAPADTQTGSQLRWREESLEFQKTKRGWVMSPLKDAAYVNREVALRVLSVRLADLAKNTDATPEQEREQTQIIRFLNLLVIDNSATASAQSN
Ga0210399_100661954	3300020581	Soil	PNAQTGSQLRWKEQSLEFEKTKRGWVMSPIQEAVYVKRDVALQVLSARLAKLAQDTDATPEQEREQKQIIRFLNLLVTDDSNAASAQSN
Ga0210399_109065881	3300020581	Soil	SLAAPANTQTGSQLRWREESLEFEKTKRGWVMSPLKDAAYVNREVALRVLSVRLADLAKNTDATPEQEREQTQIIRFLNLLVIDNSATSSAQNN
Ga0210406_103609421	3300021168	Soil	TGTQLRWREESLEFQKTKRGWVMSPLKDAAYVNREVALRVLSVRLADLAKNTDATPEQEREQTQIIRFLNLLVIDNSATSSAQNN
Ga0210406_110103331	3300021168	Soil	CLEFQKTKRGWVMSPLKDAAYVNREVALRVLSVRLADLAKNTDATPEQEREQTQIIRFLNLLVIDNSATASAPSN
Ga0210396_111617203	3300021180	Soil	LVRIESLGAPLNTQTGSQLRWKEQSLEFEKTKRGWVMSPIQEAAYVKREVALQVLSARLAELAQNTDATPEQEREQKQIIRLLNLLVTDDSSAASTQSN
Ga0210393_112801181	3300021401	Soil	LARIESLAAPADTQTGSQLRWRNESLEFEKTNRGWVMSPPKDAAYVDREVALRALSARLADLVKNTDATPEQEREQTQIIRFLNMLVIDNSGTVSAQSN
Ga0210385_102134941	3300021402	Soil	GTAVVRIESLGGPPNAQTGSQFRWNEQSVGFEKTKRGWVMSPIPEAAYVKREVALQVLSARLAELAQNTEATPEQEREQKQIIRLLNLLVTDDSSAASTQSN
Ga0210391_106186551	3300021433	Soil	LRWKEQSLEFEKTKRGWVMSPIQEAAYVQREVALQVLSTRLAELAQNTDATPELEREQKQIIRFLNLLVTDDSNAASAQSN
Ga0210391_108547742	3300021433	Soil	ESLGGPPNAQTGSQFRWKEQSVDFEKTKRGWVMSPILEAAYVKREVALQVLSARLAELAQNTEATPEQEREQKQIIRLLNLLVTDDSSAASTQSN
Ga0210392_101820593	3300021475	Soil	QSVGFEKTKRGWVMSPIPEAAYVKREVALQVLSARLAELAQNTDATPEQEREQKQIIRLLNLLVTDDSSAASTQSN
Ga0210392_104325341	3300021475	Soil	KRGTALVRIESLAAPAGTQTGSQLRWREESLEFQKTKRGWVMSPLKDAAYVNREVALRVLSIRLADLAKNTDATPEQEREQTQIIRFLNLLVIDNSATSSAQNN
Ga0210402_105970061	3300021478	Soil	VDFEKTKRGWVMSPIQEAAYVKREVALQVLSARLAELAQNTDATPEQEREQKQIIRFLNLLVTDDSNAASAQSN
Ga0210410_100668661	3300021479	Soil	TALVRIESLGAPPNMQTGSQLRWKEQSLEFEKTKRGWVMSPIQEAAYVKREVALQVLSARLAELAQDTDATPEQEREQKQIIRFLNLLVTDDSNAASAQSN
Ga0210410_110375851	3300021479	Soil	KRGTALVRIESLGPLADTQTGSQLRWREQSLEFEKTKRGWVVSPIKDAAYVKREVALQVLSARLADLAKNMDATAEQEREQKQIIRLLNLLVTNNSSTASAQSN
Ga0126371_116893531	3300021560	Tropical Forest Soil	PRWKEESLEFEKTKRGWVMNPVQEVAYVSREGAMQVLSARLAQLAQNTSTTPAQEREQRQIILFLNTLIPNNSRAESAQTN
Ga0126371_124416832	3300021560	Tropical Forest Soil	SQPRWEEETLEFEKTKRGWVMSPVQEVAYVSREAALQVLSARLAELAQNMSTTPTQEREEKQIIRFLNTLIPDNPRAESAQSN
Ga0247679_10193761	3300024251	Soil	ETGAQPRWRDLSLEFEKTKSGWLMSPLPQAAYVSREVALQALSARLAELAQNVEATVEQEREQKQIIRFLNTLVPDDSRAASAQSN
Ga0247667_10411972	3300024290	Soil	LGVLTDTRMDPQLGRNEQSLEFEKTKRGWVMNPIQDAAYIKREVALQVFSARLAELTQNTDTTPELQREQKRIVRLLNLLVTDDSSAASTQSH
Ga0247678_10332581	3300024325	Soil	ETGAQPRWRDLSLEFEKTKSGWLMSPLPQTAYVSREVALQALSARLAQLAQNVEATVEQEREQKQIIRLLNLLVPDDARAASAQSN
Ga0207684_104644603	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	APPNMQTNSHLRWKEQSLEFEKTKRGWVMSPIQEAAYVKREVALQVLSARLAELAQNTDATPEQEREQKQIIRLLNLLVTDDFSAASAQSN
Ga0207693_102280284	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	QSLEFQKTKRGWVMSPIRDAVYVKREVALRVLSARLAELAQNTNATPGQEREQQQIIRLLNLLVIETARQ
Ga0207693_104003761	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	EFQKTKRGWVMSPLKDAAYVNREVALRVLSVRLADLAKNTDATPEQEREQTQIIRFLNLLVIDNSATASAPSN
Ga0207663_103329461	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	NTQTGSQLRWKEQSLEFEKTKRGWVMSPIQEAAYVKREIALQVLSARLAELAQNPDATTEQEREQKQIIRLLNLLITDDSNAASAQSN
Ga0207646_106833263	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	EFEKTKRGWVMSPIQEAAYVKREVALQVLSARLAELAQNTDATPEQEREQKQIIRLLNLLVTDDFSAASAQSN
Ga0257146_10362062	3300026374	Soil	TQTDTQLRWKEQSLEFAKTKKGWVMSSIQETAYVRREVALQVLSARLAELAQNANATPEQERQQKQIIRFLNLLVTDDSSAASAQSN
Ga0257147_10687951	3300026475	Soil	SGSQPRWREQSLEFEKTKRGWVVNPIKDAAYVKREVALQVLSARLADLAKNMDTTPEQEREQRQIIRLLNLLVTDNSSTASPQSN
Ga0179587_103074802	3300026557	Vadose Zone Soil	QLRWKEQSLEFEKTKRGWVMSPIQEAAYVKREVALQVLSARLAELAQNTDATPEQEREQKQIIRFLNLLVTDDSSAASAQSN
Ga0207506_10018934	3300027460	Soil	GSQLRWREESLEFQKTKRGWVMSPLKDAAYVNREVALRVLSVRLADLAKNTDATPEQEREQTQIIRFLNLLVIDNSATSSAQNN
Ga0209179_10517251	3300027512	Vadose Zone Soil	EKTKRGWVMSPIQETAYVKGEVAMQVLSARLAELAQNTNATPEQERQKKQIIRFLNLLVTDDSSAASAQSN
Ga0209274_102953212	3300027853	Soil	VRIESLGAPPNAQTGSQLRWKEQSLEFEKTKRGWVMSPIQEAAYVKREVALQVLSARLAELAQNTDANAEQEREQKQIIRFLNLLVTDDSNAASAQSN
Ga0209169_104054541	3300027879	Soil	TGSQLRWKEQSLEFEKTKRGWVMSPIQEAAYVQREVALQVLSTRLAELAQNTDATPELEREQKQIIRFLNLLVTDDSNAASAQSN
Ga0209380_100307651	3300027889	Soil	GWVMSPIQEAAYVQREVALQVLSTRLAELAQNTDATPELEREQKQIIRFLNLLVTDDSNAASAQSN
Ga0209488_104099751	3300027903	Vadose Zone Soil	GAPPNTQTGSQLRWKEQALEFEKTKRGWVMNPIQEAAYVKREVALQVLSARLAELAQNTDATPEQEREQKQIIRLLNLLVTDDSSAASAQSDAKSEELEVH
Ga0209526_108645382	3300028047	Forest Soil	RIESLGTLGDAQTGSQLRWREQSLGFEKTKRGWVVRPIKDTAYVRREVALQVLSARLAELAENMDTAPQQEREEREIIGLLNLLVANHSSTASAQSN
Ga0247682_10867231	3300028146	Soil	RWRELSLEFEKTKRGWLMSPLPEPGYVSREVALQALSARLAELAQNVEATVEQEREQKQIIRFLNLLVPDNSRAASAQSN
Ga0137415_102176221	3300028536	Vadose Zone Soil	PPKMQTDSQRRWKEQPLEFEKTTRGWVMSPIQEAAYVKREVALQVLSARLAELAQNTEATPDQEREQKQIIRFLNLLVTDDSNAVSAQSN
Ga0137415_108599072	3300028536	Vadose Zone Soil	EKTKRGWVMSPIQEAAYVQREVALQVLSARLAELAQNTDATPEQEREQKQIIRLLNLLVTEDSSATSAQSN
Ga0222749_104891252	3300029636	Soil	KRGWVMSPIQEAAYVKREVALQVLSARLAELAQNTDATPEQEREQKQIIRFLNLLITDDSNAASAQSH
Ga0170834_1015519011	3300031057	Forest Soil	QKTKRGWVMSPLKDAAYVNREVALRVLSVRLADLAKNKDATPEGEREQTQIIRFLNLLVIDNSATASARSN
Ga0170834_1059666262	3300031057	Forest Soil	ALVQIESLGASLNMQMDSQLRWKEQSLGLEKTKRGWMMSSIQDAAYVKREVALQVLSARLAELAQRTYTTPEEEREQKQIIRFLNLLVTDDSSAASAQSN
Ga0170834_1118977651	3300031057	Forest Soil	LRWREQSLEFEKTKRGWVVNPLKNSAYVKREVALQVLSARLADLAKNMDATPEQEREQRQIIRLLNLLVTDKFSTASAQSN
Ga0170834_1126185661	3300031057	Forest Soil	PNMQMDSQLRWKVQSLDLEKTKRGWVMRSIEEAAYVKREVALQVLSARLAELAQNTDVTPEQEREQKQIIRLLNLLVTDDSSSQ
Ga0170834_1136219711	3300031057	Forest Soil	IESLGAPPNTQTDTQLRWKEQSLEFEKTKRGWVMSPIQETVYVKSEVALQVLSARLAELAQNTNATPEQERQKKQIIRFLNLLVTDDSSAASAQSN
Ga0170834_1136232811	3300031057	Forest Soil	IESLGAPPNTQTDTQLRWKEQSLEFEKTKRGWVMSPIQETAYVKGEVALQVLSARLAELAQNTNATPEQKRQQKQIIRFLNLLVTDDSSAASAQSN
Ga0170823_106919701	3300031128	Forest Soil	LEFEKTKRGWVMSPLKDAAYVNREIALRVLSVRLADLAKNTDATPEQEREQTQIIRFLNLLVIDNSATASAQSN
Ga0170824_1082166342	3300031231	Forest Soil	VRIESLAAPADTQTGSQFRWREESLKFEKTKRGWVMSALKDSAYVNREVALRVLSVRLADLAKNTDATHEQEREQTQIIRFLNLLVIDHSATASAQSN
Ga0170824_1192407342	3300031231	Forest Soil	VRIESLGAPPNTQTDTQLRWKEQSLEFEKTKRGWVMSPIQETAYVKGEVALQVLSARLAELAQNTNATPEQKRQQKQIIRFLNLLVTDDSSAASAQSN
Ga0170818_1041499532	3300031474	Forest Soil	VRIESLGASPNRQMDSQLRWKEQSLELEKTKRGWVMSSPREAAYVKREVALQVLSARLAELVQNTDGTPEQEREQKQIIRFLNLLVTDDSSAASAQSN
Ga0310915_107611142	3300031573	Soil	EFEKTKRGWVISPVQEVAYVSREGAMQVLSARLAELAQNTSTTPAQEQEQKQIIHFLSTLIPDNSRAESAQSN
Ga0307474_103187523	3300031718	Hardwood Forest Soil	IESLAAPADTQTGSQLRWREESLQFEKTKRGWVMSPLEDAAYVNREVALRVLSVRLADLAKTTDASPEQEREQTQIIRFLNLLVIDNSATASAQSN
Ga0306917_113219221	3300031719	Soil	VPANVQPGFRWREQSLEFEKTKGGWVMSPVNDAAYVKGEVALQVLSSRLADLAKNIDATPEQEREERQIIRLLNLLVTDNSSTASAQSN
Ga0306918_110890131	3300031744	Soil	AGTQALSPSGWQEQSLEFEKTKRGWVLHPLQDAAYIKREIALEVLSARLAELARNTEATGEQEHEQKEIIRLLSWLVPDDSNIASAPSN
Ga0307477_109672291	3300031753	Hardwood Forest Soil	IKGKRGTALIRIESLGTLADTQPGSQLRWREQSLEFEKTKRGWVLSPIKDTAYVRREVALQVLSARLAGLAENMDPTPEQEREQRQLIRLLNLLVTDNSSSVSAQRN
Ga0307478_100833541	3300031823	Hardwood Forest Soil	ESLAAIGDTQTGSQLRWREESLEFEKTRRGWVMSPLKDTAYVNREVALRVLSVRLADLAKNTDTTAEQEREQTQIIRFLNLLVIDNSATASAQSN
Ga0307478_106995661	3300031823	Hardwood Forest Soil	REQSLEFEKTKRGWVMSPIKDTAYVKREVALQVLSARLADLAKNTDAAPEQEREQREIIRLLNLLVTDNSSTASAQSN
Ga0318511_102866801	3300031845	Soil	WVISPVQEVAYVSREGAMQVLSARLAELAQNTSTTPAQEQEQKQIIHFLSTLIPDNSRAESAQSN
Ga0310912_107948772	3300031941	Soil	FEKTKKGWVMSPVQEVSYVSRETALRVLSARLADLAQDTSITPAQEREQNQIIRFLNTLISDNPRAESAQSN
Ga0310916_112817071	3300031942	Soil	VRIESLAAPADTQAGSQLRWREESLRFEKTKRGWIVSPLKDAAYVNREVALRVLSVRLADLAKNTDATPEQEREQTQIIRFLNLLVIDNSATASAPSN
Ga0310913_102742192	3300031945	Soil	ESLGTLPDSYAHAQPRWKEESLEFEKTKRGWVISSVQEVAYVSREGAMQVLSARLAELAQNTSTTPAQEQEQKQIIHFLSTLIPDNSRAESAQSN
Ga0310909_109054831	3300031947	Soil	IESLGTLPDSHAGPQPRWNEESLEFEKTKKGWVMSPVQEVSYVSRETALRVLSARLADLAQDTSITPAQEREQNQIIRFLNTLISDNPRAESAQSN
Ga0310909_109300822	3300031947	Soil	SQLRWREESLRFEKTKRGWIVSPLKDAAYVNREVALRVLSVRLADLAKNTDATPEQEREQTQIIRFLNLLVIDNSATASAPSN
Ga0307479_108199083	3300031962	Hardwood Forest Soil	KRGWVMSPIKDTAYVKREVALQVLSARLADLARNTDAAPEQEREQREIIRILNLLVTDNSSTASAESN
Ga0307479_116466911	3300031962	Hardwood Forest Soil	KGRRGTALVRIESLGVPPNMQTDSQLRWKEQSLQFEKTKSGWVMSPIQEAAYVKREVALQVLSARLAELAQNTDTTPEQEREQKQIIRLLNLLVTDDSRAVSAQK
Ga0316040_1129981	3300032121	Soil	APPNTQTGSPPRWKEQSLEFEKTKRGWVMSPIQEAAYVKREVALQVLSARLAELAQNTDATPEQEREQKQIIRFLNLLFTDDSNAASAQSN
Ga0307471_1040961691	3300032180	Hardwood Forest Soil	NMQMDSQLHWKEQSLELEKTKRGWVMSSIQEAAYVKREVALQVLSARLAELAQNTDGTPEQEREQKQIIRFLNLLVTDDSSAASAQSN
Ga0307472_1014463002	3300032205	Hardwood Forest Soil	MRGTALVRIESLSTLEDTQTGSQLRWKEQSLEFEKTKRGWVMRPIKNTAYVQREVALQVLSARLSNLAKNRDATPQQEREQRQIIRLLNLLVTDNSSTRSAQSN
Ga0307472_1019869911	3300032205	Hardwood Forest Soil	GSQLHWKEQSLEFEKTKRGWVMSPIREAAYVKREVALQVLSARLAELAQNTDATPEQEREQKQIIRLLNSLVTDDSSAASAQSN
Ga0310914_104165602	3300033289	Soil	WREQSLEFEKTKGGWVMSPVNDAAYVKGEVALQVLSSRLADLAKNIDATPEQEREERQIIRLLNLLVTDNSSTASAQSN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F058468

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences