Metagenome / Metatranscriptome Family F058541

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F058541
Family Type	Metagenome / Metatranscriptome
Number of Sequences	135
Average Sequence Length	93 residues
Representative Sequence	MIFGVNATRSAVVIAETKGAGGKFVITAIRPIPFQVRSGDDLAELLQSLITLFDRKGKGAGSVIALLKCSSGRFGSCLEAIKGEAMVELAAAQRGLR
Number of Associated Samples	95
Number of Associated Scaffolds	135

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	73.33 %
% of genes near scaffold ends (potentially truncated)	98.52 %
% of genes from short scaffolds (< 2000 bps)	91.11 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.70

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (53.333 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen (17.778 % of family members)
Environment Ontology (ENVO)	Unclassified (41.481 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (41.481 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 32.00% β-sheet: 26.40% Coil/Unstructured: 41.60%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.70
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.70
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 135 Family Scaffolds
PF01339	CheB_methylest	7.41
PF07883	Cupin_2	5.19
PF04349	MdoG	3.70
PF01797	Y1_Tnp	2.96
PF00248	Aldo_ket_red	2.22
PF01434	Peptidase_M41	1.48
PF00196	GerE	1.48
PF00873	ACR_tran	1.48
PF12840	HTH_20	1.48
PF03831	YjdM	1.48
PF01964	ThiC_Rad_SAM	0.74
PF01152	Bac_globin	0.74
PF00578	AhpC-TSA	0.74
PF01243	Putative_PNPOx	0.74
PF00535	Glycos_transf_2	0.74
PF07978	NIPSNAP	0.74
PF02566	OsmC	0.74
PF11154	DUF2934	0.74
PF08327	AHSA1	0.74
PF08392	FAE1_CUT1_RppA	0.74
PF01757	Acyl_transf_3	0.74
PF00999	Na_H_Exchanger	0.74
PF02518	HATPase_c	0.74
PF00487	FA_desaturase	0.74
PF05960	DUF885	0.74
PF06250	YhcG_C	0.74
PF02899	Phage_int_SAM_1	0.74

COG ID	Name	Functional Category	% Frequency in 135 Family Scaffolds
COG2201	Chemotaxis response regulator CheB, contains REC and protein-glutamate methylesterase domains	Signal transduction mechanisms [T]	14.81
COG3131	Periplasmic glucan biosynthesis protein OpgG	Cell wall/membrane/envelope biogenesis [M]	3.70
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	2.96
COG0465	ATP-dependent Zn proteases	Posttranslational modification, protein turnover, chaperones [O]	1.48
COG2824	Uncharacterized Zn-ribbon-containing protein	General function prediction only [R]	1.48
COG0025	NhaP-type Na+/H+ or K+/H+ antiporter	Inorganic ion transport and metabolism [P]	0.74
COG0422	4-amino-2-methyl-5-hydroxymethylpyrimidine (HMP) synthase ThiC	Coenzyme transport and metabolism [H]	0.74
COG0475	Kef-type K+ transport system, membrane component KefB	Inorganic ion transport and metabolism [P]	0.74
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	0.74
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	0.74
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	0.74
COG2346	Truncated hemoglobin YjbI	Inorganic ion transport and metabolism [P]	0.74
COG3004	Na+/H+ antiporter NhaA	Energy production and conversion [C]	0.74
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	0.74
COG3263	NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains	Energy production and conversion [C]	0.74
COG4651	Predicted Kef-type K+ transport protein, K+/H+ antiporter domain	Inorganic ion transport and metabolism [P]	0.74
COG4804	Predicted nuclease of restriction endonuclease-like (RecB) superfamily, DUF1016 family	General function prediction only [R]	0.74
COG4805	Uncharacterized conserved protein, DUF885 family	Function unknown [S]	0.74
COG4973	Site-specific recombinase XerC	Replication, recombination and repair [L]	0.74
COG4974	Site-specific recombinase XerD	Replication, recombination and repair [L]	0.74

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.33 %
All Organisms	root	All Organisms	46.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.33 %
cellular organisms	root	All Organisms → cellular organisms	46.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.33 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	46.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.33 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	12.59 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.70 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	2.22 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.48 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.74 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.33 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	11.85 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	2.22 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.74 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.74 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.74 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.74 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.33 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	2.22 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	2.22 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1.48 %
Rhodothermaeota	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Rhodothermaeota	0.74 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.74 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.74 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.74 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.74 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.33 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	2.22 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2.22 %
Chitinophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia	0.74 %
Rhodothermia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Rhodothermaeota → Rhodothermia	0.74 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	0.74 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.74 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	0.74 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.74 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.74 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.33 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2.22 %
Chitinophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales	0.74 %
Rhodothermales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Rhodothermaeota → Rhodothermia → Rhodothermales	0.74 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.74 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	0.74 %
Nannocystineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae	0.74 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	0.74 %
Verrucomicrobia subdivision 3	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	0.74 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.74 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.33 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2.22 %
Pedosphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera	0.74 %
Chitinophagaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	0.74 %
unclassified Rhodothermales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Rhodothermaeota → Rhodothermia → Rhodothermales → unclassified Rhodothermales	0.74 %
unclassified Flavobacteriales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales	0.74 %
Kofleriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae	0.74 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.74 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	0.74 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.74 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.33 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2.22 %
Pedosphaera parvula	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	0.74 %
Rhodothermales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Rhodothermaeota → Rhodothermia → Rhodothermales → unclassified Rhodothermales → Rhodothermales bacterium	0.74 %
Flavobacteriales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	0.74 %
Niabella	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Niabella	0.74 %
Haliangium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium	0.74 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.74 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	0.74 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.74 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.33 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2.22 %
Niabella ginsengisoli	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Niabella → Niabella ginsengisoli	0.74 %
Haliangium ochraceum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	0.74 %
Pedosphaera parvula	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	0.74 %
Rhodothermales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Rhodothermaeota → Rhodothermia → Rhodothermales → unclassified Rhodothermales → Rhodothermales bacterium	0.74 %
Flavobacteriales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	0.74 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.74 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	0.74 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.74 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.74 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908038\|B3_all_c_ConsensusfromContig87256	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	2285	Open in IMG/M
2124908041\|P3_CLC_ConsensusfromContig47168	All Organisms → cellular organisms → Bacteria	1565	Open in IMG/M
3300000956\|JGI10216J12902_114902322	Not Available	586	Open in IMG/M
3300001213\|JGIcombinedJ13530_100480689	Not Available	551	Open in IMG/M
3300001385\|JGI20193J14888_1037313	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	630	Open in IMG/M
3300002569\|JGI24136J36422_10058485	All Organisms → cellular organisms → Bacteria	1113	Open in IMG/M
3300002569\|JGI24136J36422_10070459	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	987	Open in IMG/M
3300004282\|Ga0066599_101581864	Not Available	507	Open in IMG/M
3300005365\|Ga0070688_101479788	Not Available	552	Open in IMG/M
3300005617\|Ga0068859_101432358	Not Available	762	Open in IMG/M
3300006055\|Ga0097691_1060003	All Organisms → cellular organisms → Bacteria	1265	Open in IMG/M
3300006640\|Ga0075527_10210449	Not Available	561	Open in IMG/M
3300006795\|Ga0075520_1458194	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	505	Open in IMG/M
3300006864\|Ga0066797_1044363	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1565	Open in IMG/M
3300007799\|Ga0105049_10967033	Not Available	571	Open in IMG/M
3300009029\|Ga0066793_10259931	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	1006	Open in IMG/M
3300009029\|Ga0066793_10872480	Not Available	510	Open in IMG/M
3300009166\|Ga0105100_10947673	Not Available	538	Open in IMG/M
3300009171\|Ga0105101_10615909	Not Available	539	Open in IMG/M
3300009637\|Ga0116118_1254398	Not Available	538	Open in IMG/M
3300009646\|Ga0116132_1210397	Not Available	590	Open in IMG/M
3300010131\|Ga0115594_1144361	Not Available	500	Open in IMG/M
3300010400\|Ga0134122_12787471	Not Available	542	Open in IMG/M
3300010401\|Ga0134121_11428400	Not Available	704	Open in IMG/M
3300011445\|Ga0137427_10295039	Not Available	681	Open in IMG/M
3300014152\|Ga0181533_1063243	All Organisms → cellular organisms → Bacteria → Proteobacteria	1823	Open in IMG/M
3300014489\|Ga0182018_10610499	Not Available	572	Open in IMG/M
3300014490\|Ga0182010_10726031	Not Available	560	Open in IMG/M
3300014490\|Ga0182010_10865898	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	514	Open in IMG/M
3300014494\|Ga0182017_10051348	All Organisms → cellular organisms → Bacteria	2750	Open in IMG/M
3300014494\|Ga0182017_10102263	All Organisms → cellular organisms → Bacteria	1876	Open in IMG/M
3300014494\|Ga0182017_10346708	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	924	Open in IMG/M
3300014494\|Ga0182017_10484853	All Organisms → cellular organisms → Bacteria	759	Open in IMG/M
3300014495\|Ga0182015_10999397	Not Available	519	Open in IMG/M
3300014496\|Ga0182011_10012483	All Organisms → cellular organisms → Bacteria	6317	Open in IMG/M
3300014496\|Ga0182011_10106623	All Organisms → cellular organisms → Bacteria	1952	Open in IMG/M
3300014496\|Ga0182011_10453058	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	831	Open in IMG/M
3300014496\|Ga0182011_11040396	Not Available	506	Open in IMG/M
3300014498\|Ga0182019_10472127	Not Available	866	Open in IMG/M
3300014502\|Ga0182021_10343902	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1762	Open in IMG/M
3300014502\|Ga0182021_11511551	All Organisms → cellular organisms → Bacteria	809	Open in IMG/M
3300014502\|Ga0182021_11536369	Not Available	802	Open in IMG/M
3300014502\|Ga0182021_11720675	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M
3300014502\|Ga0182021_11945138	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	708	Open in IMG/M
3300014502\|Ga0182021_12048092	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300014502\|Ga0182021_12400900	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300014502\|Ga0182021_13380119	Not Available	532	Open in IMG/M
3300014838\|Ga0182030_10753173	Not Available	901	Open in IMG/M
3300014839\|Ga0182027_10217585	All Organisms → cellular organisms → Bacteria	2205	Open in IMG/M
3300014839\|Ga0182027_10811670	Not Available	977	Open in IMG/M
3300014839\|Ga0182027_10863732	All Organisms → cellular organisms → Bacteria	940	Open in IMG/M
3300014839\|Ga0182027_10996225	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Niabella → Niabella ginsengisoli	859	Open in IMG/M
3300014839\|Ga0182027_11469516	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	672	Open in IMG/M
3300015203\|Ga0167650_1036399	All Organisms → cellular organisms → Bacteria	1291	Open in IMG/M
3300015360\|Ga0163144_10095194	All Organisms → cellular organisms → Bacteria → Proteobacteria	4774	Open in IMG/M
3300015371\|Ga0132258_13722826	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Rhodothermaeota → Rhodothermia → Rhodothermales → unclassified Rhodothermales → Rhodothermales bacterium	1040	Open in IMG/M
3300017935\|Ga0187848_10054800	All Organisms → cellular organisms → Bacteria	1906	Open in IMG/M
3300017935\|Ga0187848_10364297	Not Available	598	Open in IMG/M
3300018002\|Ga0187868_1202376	Not Available	689	Open in IMG/M
3300018003\|Ga0187876_1276436	Not Available	541	Open in IMG/M
3300018009\|Ga0187884_10273511	Not Available	685	Open in IMG/M
3300018016\|Ga0187880_1012995	All Organisms → cellular organisms → Bacteria	5324	Open in IMG/M
3300018022\|Ga0187864_10049204	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	2374	Open in IMG/M
3300018023\|Ga0187889_10125324	Not Available	1242	Open in IMG/M
3300018024\|Ga0187881_10363920	Not Available	595	Open in IMG/M
3300018030\|Ga0187869_10293366	Not Available	783	Open in IMG/M
3300018043\|Ga0187887_10316249	Not Available	922	Open in IMG/M
3300018057\|Ga0187858_10335600	Not Available	951	Open in IMG/M
3300019082\|Ga0187852_1155875	Not Available	966	Open in IMG/M
3300019082\|Ga0187852_1166322	All Organisms → cellular organisms → Bacteria	927	Open in IMG/M
3300020067\|Ga0180109_1202632	Not Available	509	Open in IMG/M
3300023101\|Ga0224557_1168182	Not Available	792	Open in IMG/M
3300024233\|Ga0224521_1112284	Not Available	584	Open in IMG/M
3300025548\|Ga0208716_1098067	Not Available	581	Open in IMG/M
3300025865\|Ga0209226_10009747	All Organisms → cellular organisms → Bacteria	4113	Open in IMG/M
3300025888\|Ga0209540_10432454	Not Available	710	Open in IMG/M
3300026273\|Ga0209881_1143675	Not Available	595	Open in IMG/M
3300027723\|Ga0209703_1280365	Not Available	595	Open in IMG/M
3300028573\|Ga0265334_10086552	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1148	Open in IMG/M
3300028573\|Ga0265334_10099340	Not Available	1055	Open in IMG/M
3300028678\|Ga0302165_10138323	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300028776\|Ga0302303_10119174	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	953	Open in IMG/M
3300028800\|Ga0265338_10494769	All Organisms → cellular organisms → Bacteria	861	Open in IMG/M
3300028800\|Ga0265338_10633252	All Organisms → cellular organisms → Bacteria	742	Open in IMG/M
3300028800\|Ga0265338_10942806	Not Available	586	Open in IMG/M
3300029882\|Ga0311368_10333704	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1137	Open in IMG/M
3300029939\|Ga0311328_11056555	Not Available	526	Open in IMG/M
3300029955\|Ga0311342_11234790	Not Available	536	Open in IMG/M
3300029957\|Ga0265324_10065508	All Organisms → cellular organisms → Bacteria	1240	Open in IMG/M
3300029957\|Ga0265324_10149284	All Organisms → cellular organisms → Bacteria	794	Open in IMG/M
3300029957\|Ga0265324_10234216	Not Available	623	Open in IMG/M
3300029990\|Ga0311336_10449551	All Organisms → cellular organisms → Bacteria	1086	Open in IMG/M
3300029999\|Ga0311339_11869736	Not Available	519	Open in IMG/M
3300030047\|Ga0302286_10561626	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300030057\|Ga0302176_10377896	Not Available	571	Open in IMG/M
3300030399\|Ga0311353_10727329	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	854	Open in IMG/M
3300030518\|Ga0302275_10465236	Not Available	643	Open in IMG/M
3300030610\|Ga0247613_10118620	Not Available	826	Open in IMG/M
3300030688\|Ga0311345_10661954	Not Available	850	Open in IMG/M
3300031231\|Ga0170824_101019637	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	749	Open in IMG/M
3300031232\|Ga0302323_100628474	Not Available	1166	Open in IMG/M
3300031232\|Ga0302323_102532140	Not Available	586	Open in IMG/M
3300031234\|Ga0302325_11395500	Not Available	912	Open in IMG/M
3300031234\|Ga0302325_12698891	Not Available	586	Open in IMG/M
3300031234\|Ga0302325_12865357	Not Available	563	Open in IMG/M
3300031236\|Ga0302324_100217680	All Organisms → cellular organisms → Bacteria → Proteobacteria	3023	Open in IMG/M
3300031236\|Ga0302324_101070014	All Organisms → cellular organisms → Bacteria → Acidobacteria	1088	Open in IMG/M
3300031236\|Ga0302324_101495540	Not Available	877	Open in IMG/M
3300031241\|Ga0265325_10041623	All Organisms → cellular organisms → Bacteria	2406	Open in IMG/M
3300031241\|Ga0265325_10544028	Not Available	502	Open in IMG/M
3300031249\|Ga0265339_10456903	All Organisms → cellular organisms → Bacteria → PVC group	592	Open in IMG/M
3300031258\|Ga0302318_10121797	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1191	Open in IMG/M
3300031344\|Ga0265316_10720583	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300031521\|Ga0311364_10765069	All Organisms → cellular organisms → Bacteria	970	Open in IMG/M
3300031525\|Ga0302326_10152645	Not Available	3969	Open in IMG/M
3300031595\|Ga0265313_10451095	Not Available	500	Open in IMG/M
3300031722\|Ga0311351_11305135	Not Available	558	Open in IMG/M
3300031726\|Ga0302321_100362164	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1570	Open in IMG/M
3300031726\|Ga0302321_101501829	Not Available	777	Open in IMG/M
3300031726\|Ga0302321_102905033	Not Available	559	Open in IMG/M
3300031902\|Ga0302322_101384100	Not Available	857	Open in IMG/M
3300031902\|Ga0302322_101484006	All Organisms → cellular organisms → Bacteria	827	Open in IMG/M
3300031902\|Ga0302322_102550924	Not Available	630	Open in IMG/M
3300031902\|Ga0302322_102738575	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300031902\|Ga0302322_103113538	Not Available	570	Open in IMG/M
3300032420\|Ga0335397_10132691	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	2497	Open in IMG/M
3300033418\|Ga0316625_102624894	Not Available	512	Open in IMG/M
3300033521\|Ga0316616_103336458	Not Available	605	Open in IMG/M
3300033521\|Ga0316616_103580830	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300033819\|Ga0334816_030448	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1042	Open in IMG/M
3300033827\|Ga0334848_069167	Not Available	630	Open in IMG/M
3300034070\|Ga0334822_038921	All Organisms → cellular organisms → Bacteria	1048	Open in IMG/M
3300034127\|Ga0370489_0283796	Not Available	501	Open in IMG/M
3300034158\|Ga0370507_0119900	All Organisms → cellular organisms → Bacteria	827	Open in IMG/M
3300034161\|Ga0370513_194661	Not Available	500	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.89%
Host-Associated	Host-Associated	11.11%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	68.15%
Aquatic	Environmental → Aquatic	20.74%
Plants	Host-Associated → Plants	11.11%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	40.74%
Peat	Environmental → Terrestrial → Peat	27.41%
Freshwater	Environmental → Aquatic → Freshwater	19.26%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.63%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.48%
Marine	Environmental → Aquatic → Marine	0.74%
Sediment	Environmental → Aquatic → Sediment	0.74%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Terrestrial → Soil → Wetlands	27.41%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	27.41%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	12.59%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	12.59%
Soil	Host-Associated → Plants → Rhizosphere → Soil	9.63%
Sediment	Environmental → Aquatic → Freshwater → Sediment	3.70%
Ice	Environmental → Aquatic → Freshwater → Ice	1.48%
Lake	Environmental → Aquatic → Freshwater → Lake	0.74%
Pond	Environmental → Aquatic → Freshwater → Pond	0.74%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.74%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.74%
Loam	Environmental → Terrestrial → Soil → Loam	0.74%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.74%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	27.41%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	22.96%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	11.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	9.63%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	8.15%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.44%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	3.70%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	2.22%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.48%
Glacial Lake	Environmental → Aquatic → Freshwater → Ice → Glacial Lake	1.48%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.48%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.74%
Sediment	Environmental → Aquatic → Freshwater → Pond → Sediment	0.74%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.74%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.74%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.74%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.74%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	17.78%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	11.11%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	10.37%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	9.63%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	8.89%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	6.67%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	3.70%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	3.70%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	2.22%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.22%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	2.22%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.48%
Freshwater	Environmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater	1.48%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	1.48%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.48%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	1.48%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	1.48%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	0.74%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.74%
Freshwater Microbial Mat	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat	0.74%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.74%
Freshwater	Environmental → Aquatic → Freshwater → Pond → Sediment → Freshwater	0.74%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	0.74%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.74%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.74%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.74%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.74%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.74%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.74%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908038	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog Site B3	Environmental	Open in IMG/M
2124908041	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P3	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300001385	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-092012	Environmental	Open in IMG/M
3300002569	Arctic peat soil from Barrow, Alaska, USA - Barrow Graham LP Ref core NGADG0011-212	Environmental	Open in IMG/M
3300004282	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Initial sediment	Environmental	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300006055	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012	Environmental	Open in IMG/M
3300006640	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost305-11B	Environmental	Open in IMG/M
3300006795	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B	Environmental	Open in IMG/M
3300006864	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 3 DNA2013-193	Environmental	Open in IMG/M
3300007799	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-06	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009166	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300009171	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009637	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_40	Environmental	Open in IMG/M
3300009646	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_150	Environmental	Open in IMG/M
3300010131	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_11_14_A (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011445	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT700_2	Environmental	Open in IMG/M
3300014152	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_60_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014490	Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaG	Environmental	Open in IMG/M
3300014494	Permafrost microbial communities from Stordalen Mire, Sweden - 712E3D metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014496	Permafrost microbial communities from Stordalen Mire, Sweden - 711E1D metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015203	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-3c, vegetated patch on medial moraine)	Environmental	Open in IMG/M
3300015360	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.BULKMAT1	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300018002	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_40	Environmental	Open in IMG/M
3300018003	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_40	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018016	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40	Environmental	Open in IMG/M
3300018022	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40	Environmental	Open in IMG/M
3300018023	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100	Environmental	Open in IMG/M
3300018024	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300019082	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_40	Environmental	Open in IMG/M
3300020067	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLIBT47_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300023101	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 10-14	Environmental	Open in IMG/M
3300024233	Peat soil microbial communities from Stordalen Mire, Sweden - C.F.S.T0	Environmental	Open in IMG/M
3300025548	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-3 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025865	Arctic peat soil from Barrow, Alaska, USA - Barrow Graham LP Ref core NGADG0011-212 (SPAdes)	Environmental	Open in IMG/M
3300025888	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 011-21A (SPAdes)	Environmental	Open in IMG/M
3300026273	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 3 DNA2013-193 (SPAdes)	Environmental	Open in IMG/M
3300027723	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300028573	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG	Host-Associated	Open in IMG/M
3300028678	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E3_2	Environmental	Open in IMG/M
3300028776	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E2_1	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029939	I_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029955	II_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029957	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG	Host-Associated	Open in IMG/M
3300029990	I_Fen_N2 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030047	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E2_3	Environmental	Open in IMG/M
3300030057	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_1	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030518	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_2	Environmental	Open in IMG/M
3300030610	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Ab2 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030688	II_Bog_N2 coassembly	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031241	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG	Host-Associated	Open in IMG/M
3300031249	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG	Host-Associated	Open in IMG/M
3300031258	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_1	Environmental	Open in IMG/M
3300031344	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG	Host-Associated	Open in IMG/M
3300031521	III_Fen_E2 coassembly	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031595	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG	Host-Associated	Open in IMG/M
3300031722	II_Fen_N3 coassembly	Environmental	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300032420	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-04 (spades assembly)	Environmental	Open in IMG/M
3300033418	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D1_A	Environmental	Open in IMG/M
3300033521	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B	Environmental	Open in IMG/M
3300033819	Peat soil microbial communities from Stordalen Mire, Sweden - 713 E-2-M	Environmental	Open in IMG/M
3300033827	Peat soil microbial communities from Stordalen Mire, Sweden - 714 E2 5-9	Environmental	Open in IMG/M
3300034070	Peat soil microbial communities from Stordalen Mire, Sweden - 713 E-3-M	Environmental	Open in IMG/M
3300034127	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_05D_16	Environmental	Open in IMG/M
3300034158	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_06D_18	Environmental	Open in IMG/M
3300034161	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_fen_01D_18	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
B3_all_c_00644160	2124908038	Soil	MIFGVNATRSAVVIAETKGAGGKFVITAIRPIPFQVRSGDDLAELLQSLITLFDRKGKGAGSVIALLKCSSGRFGSCLEAIKGEAMVELAAAQRGLR
P3_CLC_00217270	2124908041	Soil	MIFGVNATKSAVVIAETKGVGDKFVITAIRPIPFQVRSGDDLAELLQSLITLFDRKGKGAGSVIALLKCSSGRFGSCLEAIKGEAMVELAAVQRGLRVVKVAPQ
JGI10216J12902_1149023222	3300000956	Soil	MIFGVNATKSAIVIAETKGARDSFVITAIRPIPFRVRSGDDLTELLQALITLFDRKGKAAGSVIALLKCSSGRFGSCLEAIKGETMVELAASHRAMRVVKIAPQSLKKTLGC
JGIcombinedJ13530_1004806891	3300001213	Wetland	MCHEYLNKIFQMYFGVNATRSDVVIAETRGAGDKFAVTAIRPVPFKVRSGDDLAELLQSLLTLFDRQGKGASSVIALLKCSSGRFGSCLEAIKGEAMVELAASRRGLRVVKVAPQSLKK
JGI20193J14888_10373132	3300001385	Arctic Peat Soil	MIFGVNATRSAVVIAETKGAGDKFVVTAIRPVPFQVRSGDDLTELLQCLITLFDRKGKGAGSVIALLKCSSGRFGSCLEAIKGEAMIELAASQRGLRVVKV
JGI24136J36422_100584851	3300002569	Arctic Peat Soil	MILGISTTKSAVVIAETKGAGDKFVITVIKPIPFQVRTGDDLVELLQSLITLFDRKGRGAGSVIALLKCSS
JGI24136J36422_100704592	3300002569	Arctic Peat Soil	MIFGIAATKSAVVIAETKGTGNKFAITAIRSIPFEVQSGDHLAELLRCLTTIFGRGARGASLTIALLKCSSGRF
Ga0066599_1015818642	3300004282	Freshwater	MIFGLNATKTTVVIAETKGASDSFVITAIRPILFQVCSGDDLAELLRTLITLFGRKGKGTGSFIALLKCSSGRFGSCL
Ga0070688_1014797882	3300005365	Switchgrass Rhizosphere	MIFGINATKSAVVIVGTKGAGDRFVITAIRPIPFQVRTGEDLAELRQRLLTLFNRKGKGADSVIALLKCSSGRFGSCLEAIKGEAMIELAAHERGL
Ga0068859_1014323582	3300005617	Switchgrass Rhizosphere	MIFGVNATKSAVVIVGTKGAGDRFVITAIRPIPFQVRTGEDLAELRQRLLTLFNRKGKGADSVIALLKCSSGRFGSCLEAIKGEAMIELAAHERGLCVVKVAPQSLKRALGCATDQKW
Ga0097691_10600033	3300006055	Arctic Peat Soil	VIEMSNSKNTDVIFGMNATRSAVVVAQTKGAGKRFVVTAIRPILFQVSGGNDLAELLKILRALFDRKGKGAVLVSPSPPPTPSL
Ga0075527_102104491	3300006640	Arctic Peat Soil	MIFGIAATKSAVVIAETKRTGNKFAITAIRSIPFEVQYGDHLAELLRCLTTIFGRGARGASL
Ga0075520_14581942	3300006795	Arctic Peat Soil	MIFGVNATKSAVVIAETKGTGDKFVITAIRPIPFQVRSGDDLAELLQRLITVFDRKGKSAGSVIALLKCSSGRFG
Ga0066797_10443631	3300006864	Soil	MIFGVNATKSAVVIAETKGAGSKFVITTIRPIPFQVRSGDDLTELLQSLITVFDRKGMGADSVIALLKCSSGLFCLWLRATTRYTMSRSSAA
Ga0105049_109670331	3300007799	Freshwater	MNFGVNATKSAVVIAETKGAGDSFAIAAIRPVSFQVNSGDDLTELLQTLITIFDRKSKGGGSVIALLKCSSGRFGSCLEAIKGEAMVELAASQLGLC
Ga0066793_102599312	3300009029	Prmafrost Soil	MIFGVNATRSAVVIAETKGAGGKLVITAIRPIPFQVRSGDDLAEVLQSLITLFDRKGRGAGSVIALLKCSSGRFGSCLEAIKGEAMVELTAAQRGLRDVKVAPQSLKRPLG
Ga0066793_108724802	3300009029	Prmafrost Soil	MIFGVNATKSAVVIAETKGVGDKFVITAIRPIPFQVRSGDDLAELLQSLITIFDRHSKGADSVIVLLKCSSGRFGSCLEAIKGE
Ga0105100_109476732	3300009166	Freshwater Sediment	MIFGVNATKSAVVIAETKGAGDKFVIAAIRPIPFQVGSGDDLAELLQSLITLFDRKGRGAGSVIALLKCSSGRFGSCLEAIKGEALVELAASQRALRVVKVAPQSL
Ga0105101_106159091	3300009171	Freshwater Sediment	MIFGVNATKSAVVIAETKGAGDKFVIAAIRPIPFQVGSGDDLAELLQSLITLFDRKGRGAGSFIALLKCSSGRFGSCLEAIKGEALVELAASQRALRVVK
Ga0116118_12543981	3300009637	Peatland	MLFGVNATRSAVVIAETRGAGGKFVVTAIRPISFQVRSGDDLAELRQSLIALFDRKGKGAGSVIALLKCSSGRFGSCLEAI
Ga0116132_12103972	3300009646	Peatland	VIFGINATKSAIIVAETRGAGSRFVITSIRSIPFQVRFGNDLAELLRSLSALLDRKGKSAGSAVALLKCSSGRFGSCLEAIKGEAMVELAAFQHGIRVIKVAPQSLKKSLGCA
Ga0115594_11443612	3300010131	Wetland	MIFGLNATRSAVVIAETKGARDSFVITAIRPIPFQVRSGDDLGDLLQTLLTLFGRKGKGAGSVIALLQCSSG
Ga0134122_127874712	3300010400	Terrestrial Soil	MIFGINATKKAVIIAETRGAGDKFAITTIRSIPFQVRSGGDLTELLQCLTTVFDRSGRRAPATVALLKCSSGRFGSCLEAIKGEAMTELAAFRKGLRVVKVAPQSLKKTLG
Ga0134121_114284002	3300010401	Terrestrial Soil	MIFGINATKTAVIIAETKGAGGKFAITTIKPIPFQVRSGGDLAELLQCLTAVFDRGGRRPAPTVALLKCSSGRFGSCLEAIKGEAMTELAAFQK
Ga0137427_102950391	3300011445	Soil	MMLGISTTKSAVIIAETKGAGHQFAITAIRAIPFQVRTGDDLAELLQSLTTRFYRKGKGAGSVIALLKCSSGRFGSCLEAIKGEAMVELAAVQCGLRVIKVAPQSLKKTLGGATDQKW
Ga0181533_10632431	3300014152	Bog	MLFGVNATRSAVVIAETRGAGGKFVVTAIRPISFQVRSGDDLAELRQSLIALFDRKGKGAGSVIALLKCSSGRFGSCLEAIKGEAMVELAAAQRGLR
Ga0182018_106104991	3300014489	Palsa	VILGISSTKSAIIIAETKGAGRRFVITGIRSIPFQVCFGDDLAELLRSLSVLIGHKGIGAGSVVALLKCSSGRFGSCLEAIKGEAMVELAAFQHGRR
Ga0182010_107260311	3300014490	Fen	MIFGLNATKTTVVIAETKGASDAFVITAIRPILFQVRSGDDLAELLQTLITLFGRKGKGTGSFIALLKC
Ga0182010_108658981	3300014490	Fen	MLFGVNATRSAVVIVETKGAGDKFVVTAIRPVPFQVRSGDDLAGLLQSLIALFDRKGKGAGSVIALLKCSSGRFGSCL
Ga0182017_100513484	3300014494	Fen	MLFGVNATRSAVVIVETKGAGDKFVVTTIRSVPFQVRSGDDLAGLLQSLIALFDRKGKGAGSVIALLKCSSGRFGSCLEAIKGEAMVELAAAQRG
Ga0182017_101022631	3300014494	Fen	MLFGVNATRSAVVIAETRGAGDKFVVTAIRPIPFQVRSGDNLAELLQSLITLFDRKGKGAGSVIALLKCSSGRFGSCLEAIKGEAMVELAAAQRGLRVVKVAPQSLKKTLGCAADQK
Ga0182017_103467081	3300014494	Fen	MLFGVNATRSAVVIVETKGAGDKFVVTAIRPVPFQVRSGDDLAGLLQSLIALFDRKGRGAGSVIALLKCSSGRFGSCLEAIKGEAMVELAAAQRGLRVVKV
Ga0182017_104848531	3300014494	Fen	MLFGVNATRSAVVIVETKGAGDKFVVTAIRPVPFQVRSGDDLAGLLQSLIALFDRKGRGAGSVIALLKCSSGRFGSCLEAIKGEAMVELAAAQRGLRVVKVAPQSLKKTLGCATDQKWRD
Ga0182015_109993971	3300014495	Palsa	VIFGINATKSDIVIAETRSAGSKFVITAIRSIPFQVRFGDDLAELLRSLSALLDHKKKGAVLIVALLKCSSGRFGSCLEAIKGEAIIELAAFQKGLPVIKIAPQSLKRTLGCAADQK
Ga0182011_100124838	3300014496	Fen	MLFGVNATRSAVVIVETKGAGDKFVVTAIRPVPFQVRSGDDLAELLQSLIALFDRKGKGAGSVIALLKCSSGRFGSCLEAIKGEAMVELAAA
Ga0182011_101066231	3300014496	Fen	MLFGVNATGSAVVIAETRGAGGKFVVTAIRPVPFQVRSGDDLAELLQSLITLFDRKGKGAGSAIALLKCSSGRFGSCLEAIKGEAMVELAAAQRGLRVVKVAP
Ga0182011_104530581	3300014496	Fen	MLFGVNATRSAVVIVETKGAGDKFVVTAIRPVPFQVRSGDDLAGLLQSLIALFDRKGRGAGSVIALLKCSSGRFGSCLEAIKGEAMVELAAAQRGLRV
Ga0182011_110403962	3300014496	Fen	MIFGVNATRSAVVIAETRGAGGKFVVTAIRPVPFQVRSGDDLAELLQSLITLFDRKGKGAGSVIALLKCSSGRFGSCLEAIKGEAMVELAA
Ga0182019_104721272	3300014498	Fen	MIFGVAATKSAVVIAETKGTGNKFAITAIRPIPFEARSGDNLAELLRCLITIFNRGGRGASSTLALLKCSSGRFGSCLEAIK
Ga0182021_103439021	3300014502	Fen	MLFGVNATRSAVVIVETKGAGDKFVVTAIRPVPFQVRSGDDLAGLLQSLIALFDRKGRGAGSVIALLKCSSGRFGSCLEAIKGEAMVELAAAQRGLR
Ga0182021_115115511	3300014502	Fen	VIEMSNLKNTNVIFGMNATKSAVVVAQTKGTGGRFGVTAIRPILFQVACGKDLAELLQILRALFHRKGQRTGLVIALLKCSSGRFGSCLEAIK
Ga0182021_115363692	3300014502	Fen	MIFGIAATKSAVVIAETKGTGNKFAIIAIRSIPFEVQSGDHLAELLQCLTTIFGRGARGASLTIAL
Ga0182021_117206751	3300014502	Fen	MLFGVNATRSAVVIVETKGAGDKFVITAIRPVPFQVRSGDDLAGLLQSLIALFDRKGRGAGSVIALLKCS
Ga0182021_119451381	3300014502	Fen	MIFGLSAIKSAIVVAQTKGANAKFAITSIRLIPFQVRSGDDLAKLLQTLIVLFDRKGDGTGSVIALLKCSSGRFGSCLEAIKGEAIMELAASQRGLRVVKIAPQSLKKTLGCAK
Ga0182021_120480921	3300014502	Fen	MLFGVNATRSAVVIVETKGAGDKFVVTAIRPVPFQVRSGDDLAGLLQSLIALFDRKGKGAGSVIALLKCSSGRFGSCLEAIKGEAMVELAAAQR
Ga0182021_124009001	3300014502	Fen	MIFGVNATRSAVVVAETKGAGGKFVITAIRLIPFQVRSGDDLAELLQSLITLFDRKGKGAGSVIALLKCSSGRFGSC
Ga0182021_133801191	3300014502	Fen	MIFGVNATKSAVVVVQTKGASAKFIITVIRPIAFQVRGGDDLAELLRTLGALFSGKGKDAGSVIALLKCSSG
Ga0182030_107531732	3300014838	Bog	VIFGINATKSAIIVAETRGAGSRFVITSIRSIPFQVRFGNDLAELLRSLSALLDRKGKSAGSAVALLKCSSGRFGSCLEAIKGEAMVELAAFQHGIRVIKVAPQSLKKSLGCATDQKWRDRAN
Ga0182027_102175853	3300014839	Fen	MLFGVNATRSAVVIVETKGAGGKFVVTAIRPVPFQVRSGDDLAGLLQSLIALFDRKGSGAGSVIALLKCSSGRFGSCLEAIKGEAMVELAAAQRGLRVV
Ga0182027_108116702	3300014839	Fen	MIFGVNATKSALVIAETKGAGGKFVITAIRPIPFQVRSGDDLAGLLQSLIALFDRKGRGAGSVIALLKCSSGRFGSCLEAIKGEAMVELA
Ga0182027_108637321	3300014839	Fen	MLFGVNATRSAVVIAETRGAGDKFVVTAIRPVPFQVRSGDDLAELLQSLITLFDRKGKGAGSVIALLKCSSGRFGSCL
Ga0182027_109962251	3300014839	Fen	MIIGVAATKTAVVIAETKGRGDKFAITAIRPIPFEVQSGDNLAELLRCLSTIFDRCRRGASPTI
Ga0182027_114695161	3300014839	Fen	MLFGVNATRSAVVIVETKGAGDKFVVTAIRPVPFQVRSGDDLAGLLQSLIALFDRKGRGAGSVIALLKCSSGRFGSC
Ga0167650_10363991	3300015203	Glacier Forefield Soil	MILGISTTKSAVIIAETKGAGGKFVITAIRPIPFQVLSGDDLTELLQSLITLFNRKGKGSVVALLKCSSGRFGSCLEAIKSEAMVELAAVQRGLRVVKVAPQSLKKSLGCGADQKWRDRA
Ga0163144_100951941	3300015360	Freshwater Microbial Mat	MIFGVNATKSAVIIAETKGAGDKFVIAAIRPVPFQVRSGADLAELLQSLITLFDRKGQGAGSVIALLKCSSGRFGSCLEAIKGEAMIELAAAQR
Ga0132258_137228262	3300015371	Arabidopsis Rhizosphere	MIFGINATKTAVLIAETKGAGDKFAITTIRSIPFQVRSGGDLTELLQRLTTIFDRGGQRVPATVALLKCSSGRFGSCLEAIKGEAMTELAAFQKGLRIVKVAPQSLKKTLGGATDQ
Ga0187848_100548001	3300017935	Peatland	MLFGVNATRSAVVIAETRGAGGKFVITAIRPVPFQVRSGDDLAELLQSLITLFDRKGRGAGSVIALLKCSSGRFGSC
Ga0187848_103642972	3300017935	Peatland	MIFGVAATKSAVVIAETKGTGGKFTITAIRPIPFEARSGDNLADLLRCLITIFNRGGRGASSTIALLKCSSGRFGSCLGAIKGEAI
Ga0187868_12023762	3300018002	Peatland	ACMIFGVAATKSAVVIAETGGTGDKFAITAIRPIPFEARSGDNLAELLRCLITIFDRGGRGASSTIALLEMFFRPVWFLF
Ga0187876_12764362	3300018003	Peatland	MIFGVNATKSAVVIAETRGAGGKFVITAIKPVPFQVRSGDDLAELLQSLITLFDRKGKGAGSVIALLKCSSGRFGSCLEAIKGEV
Ga0187884_102735112	3300018009	Peatland	VIFGINATKSAIIVAETRGAGSRFVITSIRSIPFQVRFGNDLAELLRSLSALLDRKGKGAGSAVALLKCSSGRFGSCLEAIKGEAMVELAAFQHGLRVIK
Ga0187880_10129954	3300018016	Peatland	MIFGVAATKSAVVIAETGGTGDKFAITAIRPIPFEARSGDNLAELLRCLITIFDRGGRGASSTIALLEMFFRPVWFLF
Ga0187864_100492041	3300018022	Peatland	MLFGVNATRSAVVIAETRGAGGKFVVTAIRPISFQVRSGDDLAELRQSLIALFDRKGKGAGSVIALLKCSSGRFGSCLE
Ga0187889_101253241	3300018023	Peatland	MIFGVAATKTAVVIAETKGTGEKFAITAIKPVPFEVQSGDNLAELLQSLTSLFDRSGRGASPTIALLKCSS
Ga0187881_103639201	3300018024	Peatland	FTRGPHKHCPLYPRLNFGDDACMIFGVAATKSAVVIAETGGTGDKFAITAIRPIPFEARSGDNLAELLRCLITIFDRGGRGASSTIALLEMFFRPVWFLF
Ga0187869_102933662	3300018030	Peatland	VIFGINATKSAIIVAETRGAGSRFVITSIRSIPFQVRFGNDLAELLRSLSALLDRKGKSAGSAVALLKCSSGRFGSCLEAIKGEAMVELAAFQHGIRVIKVAPQSLKKSLGCATD
Ga0187887_103162493	3300018043	Peatland	MLFGVNATRSAVVIAETRGAGDKFVVTAIRSIPFQVRSGDDLNGLLHALITLFARKGAGSVIALLKCSSGRFGSCLEAIKGEAMVELAAAQRGLRVVKVAPQSLKKTLGC
Ga0187858_103356002	3300018057	Peatland	VIFGINATKSAIIVAETRGAGSRFVITSIRSIPFQVRFGNDLAELLRSLSALLDRKGKSAGSAVALLKCSSGRFGSCLEAIKGEAMVELAAFQHGIRVIKVAPQSLKKSLGCATDQKWRDRA
Ga0187852_11558753	3300019082	Peatland	MIFGVAATKSAVVIAETGGTGDKFAITAIRPIPFEARSGDNLAELLRCLITIFDRGGRGASSTIALLEMFFRP
Ga0187852_11663221	3300019082	Peatland	VIFGINATKSAIIVAETRGAGSRFVITSIRSIPFQVRFGDDLAELLRSLSALLDRKGKGAGSAVALLKCSSGRFGSCLEAIKGEAMVE
Ga0180109_12026321	3300020067	Groundwater Sediment	MILGVNATKAAVVIAETKGARDSFVITAIRPIPFQVRSGDDLIELLQTLITLFDRKGKGAGSLIALLKCSSGRFGSC
Ga0224557_11681822	3300023101	Soil	MIFGINATKSAIIVAETRGAGSRFVITSIRSIPFQVRFGNDLAELLRSLSALLDRKGKSAGSAVALLKCSSGRFGSCLEAIKGEAMV
Ga0224521_11122841	3300024233	Soil	MLFGVNATRSAVVIVETKGAGGKFIVTAIRPVPFQVRSGDDLAGLLQSLIALFDRKGKGAGSVIALLKCSSGRFGSCLEAIKGEAMVELAAAQRGLRV
Ga0208716_10980671	3300025548	Arctic Peat Soil	MILGVNATRSAVVIAETKGAGGKFVVTAIRPVPFQVRSGDDLAELLQCLITLFDRKGRGAGSVIALLKCSSGRFGSCLEAIKGEAMVELAAA
Ga0209226_100097471	3300025865	Arctic Peat Soil	MIFGIAATKSAVVIAETKGTGNKFAITAIRSIPFEVQSGDNLAELLRCLSTIFDRRSRGASPTIALLQCS
Ga0209540_104324541	3300025888	Arctic Peat Soil	MIFGIAATKSAVVIAETKGTGNKFAITAIRSIPFEVQSGDHLAELLRCLTTIFGRGARGASLTIALLKCSSGRFGSC
Ga0209881_11436751	3300026273	Soil	MILGISTTKSAVVIAETKGAGDKFVITVIKPIPFQVRTGDDLAELLQSLITLFDRKGRGAGSVIALLKCSSGRFGSCLEAIKGEAMIELAASQRG
Ga0209703_12803652	3300027723	Freshwater Sediment	MIFGVNATKSAVVIAETKGAGDKFVIAAIRPIPFQVGSGDDLAELLQSLITLFDRKGRGAGSVIALLKCSSGRFGSCLEAIKGEALVELAASQRALRVVKVAPQSLK
Ga0265334_100865522	3300028573	Rhizosphere	MIFGVNTTKSKIVIIEAKGAGDEFSIASIQPIPFEVRSGDDLDQLLQILITIFDPKGKGAGSILALLKCSSGRFG
Ga0265334_100993402	3300028573	Rhizosphere	MSLMIFGVNATKAKIVILETKGAGDKFAIASIRPIPFEVRSGDDLDRLLQILISIFDPKGKGAGFILALLKC
Ga0302165_101383232	3300028678	Fen	MIFGINATKSAVVVAETKGAGGKFVVTIIRPIPFQAGCGTDLSELLQSLGTLLHRKGNGTDLVIALLKCSSGRFGSCLEAIKGEAMVELAAFQRGLRV
Ga0302303_101191742	3300028776	Palsa	VIFGIHATKSAIIIAETRGAGSRFVITAIRSIPFQVRFGDDLSELLRSLSALIGHKGKGTGSVVALLRCSSGRFGSCLEAIKGEAMVELAAFQHGLR
Ga0265338_104947692	3300028800	Rhizosphere	MILGVSATKSAVVIAETKGAGNKFVITAIRPIPFQVRSGDDLAELLQSLITLFDRKGKGAGSVIALLKCSSGRFGSCLEAIKGEAM
Ga0265338_106332521	3300028800	Rhizosphere	MIFGVNASRSAVAIAETRGAGKKFIITALRPIPFQVRSGDDLTELLQSLVTLFTRKAKGAGSVIALLKCSSGRFGSCLEAIKGEAMVELAA
Ga0265338_109428061	3300028800	Rhizosphere	MIFGVNTTKSKIVIIEAKGAGDEFSIASIQPIPFEVRSGDDLDQLLQILITIFDPKGKGAGSILALLKCSSGRFGSCLEAIKGEAMVELAAF
Ga0311368_103337041	3300029882	Palsa	VIFGINATKSAIIVAETRGAGSRFVITSIRSIPFQVRFGDDLAELLRSLCALLDRKGRGEGSVVALLKCSSGRFGSCL
Ga0311328_110565551	3300029939	Bog	MIFGVNATKSAVVVAQTKGATAKFVIIAINPIPFQAGSGDDLAELLQTLISLLHCKGKGAGSVIALLKCSSGRFGSCLEAIKGEAMVELAAVKGCLRVVK
Ga0311342_112347901	3300029955	Bog	MIFGVNATKSAILVAQTRGASAKFVITAIRRIPLQVRSGDDLAELQQTLITFFQGKGKGARTVIALLKCSSGRFGSCLEAIKGEAMVELAASQLGLRV
Ga0265324_100655081	3300029957	Rhizosphere	MIFGMNATKSAVVVAQTKGEGDQFVVTAIRPIPFQVGGGDGLAELLKSLRTLFDRKGDRAGLVIALLKCSSGRFGSCLEAIKGEAMIELAAFQRGLRVIK
Ga0265324_101492841	3300029957	Rhizosphere	MIFGIAATKSAVVIAETKGTGNKFAITAIRSIPFEVQSGDHLAELLRCLTTIFRRGARGASLTIALLKCSSGRFGSCLEAIK
Ga0265324_102342162	3300029957	Rhizosphere	MIIGISATKSALIMAESKGAGGKFVIIAIRPIPFQVRCGDDLTGLLQSLTALFNRKGGGTASAIALLKCSSGRFGSCLEAIKGEAMVELAAA
Ga0311336_104495511	3300029990	Fen	MIFGINATKSAVVVAETKGAGGKFVVTIIRPIPFQAGCGTDLSELLQSLGTLLHRKGNGTDLVIALLKCSSGRFGSCLEAIKGEAMVEL
Ga0311339_118697362	3300029999	Palsa	VILGISSTKSAIIIAETKGAGRRFVITGIRSIPFQVCFGDDLAELLRSLSVLIGHKGIGAGSVVALLKCSSGRFGSCLEAIKGEAMVELAAFQHGRRVFKVAPQSLKRTL
Ga0302286_105616262	3300030047	Fen	VIEMTNLKNSKMIFGMNATKSAVVVAQTKGAGKRFVVTAIRPILFQVGRGNDLAGLLQILRALFDHRGKGAGLVIALLKCSSGRFGSCLE
Ga0302176_103778961	3300030057	Palsa	VILGINATKFAIIIAETKGAGRRFVITGIRSIPFQVCFGDDLAELLRNLSALIGHKGNGAGSAVALLKCSSGRFGSCLEAIKGEAMVELAAFQNGLRVIKVAPQSLKKSLGCAKDQKWRD
Ga0311353_107273291	3300030399	Palsa	VILGISSTKSAIIIAETKGAGRRFVITGIRSIPFQVCFGDDLAELLRNLSALIGHKGNGAGSAVALLKCSSGRFGSCLEA
Ga0302275_104652361	3300030518	Bog	MIFGVNTTKSAIIVAQTKSARAKFVITAIRRIPFQVRSGDDLAELQQTLLTLFQCKGKGARTVIALLKCSSGRFGSCLEAIKGEAMVELAASQRGRSVFKVAPQSLKKTLGCAKDQKW
Ga0247613_101186201	3300030610	Soil	MILGINATRSAVVIAETKGAGGKFVITAIRPVPFQVRCGEDLTELLQRLITIFACACKGRSSAIALLKCSSGRFGSCLEAIKGEAIAELAAAQGGHCVVRVAPQSLKKAL
Ga0311345_106619541	3300030688	Bog	MIFGVNTTKSAIIVAQTKSARAKFVITAIRRIPFQVRSGDDLAELQQTLLTLFQCKGKGARTVIALLKCSSGRFGSCLEAIKGEAMVELAASQRGRSVFKVAPQSLKKTLGCAKDQKWRD
Ga0170824_1010196371	3300031231	Forest Soil	MLYRWRCLCDYIQVILGISTTKRAVIVAETKGAGGKFVLMTIRLIPFQVCSGDDLTELLQNLISLFSRKGRGASSVVDLLKCS
Ga0302323_1006284741	3300031232	Fen	MILGISTTKSAVIIAETKGAGGQFVITALRTIPVQVRSGDELAVLLQSLDAIFARKGRGAVSVIALLKCSSGRFGSCLEAIKGEAMVELAAVQRGI
Ga0302323_1025321402	3300031232	Fen	MIFGLNATKTTVVIAETKGDSDSFVITAIRPILFQVRSGDDLAELLQTLITLFGRKGKGTGSFIALLKCSSGRFGSCLEAIKGEAMIELAASQRGL
Ga0302325_113955002	3300031234	Palsa	MILGVNATRSAIILAQTRGAGRKFVVTTIRPIEFSVGSGDDLRELQRTLLACFNGKGAGKSAAPVIALLKCSSGRFGSCLEAIKGEAIVELAACVRGLRVVKVAP
Ga0302325_126988911	3300031234	Palsa	VAVAFFIAGEDADRTFRLNFCRMIFAVNATKSAVVVAQTKGAGARFAIIAIKPIPFQVRSGNDLAELLQTLITLFQCKGEGAGSVIALLKCSSGRFASCLEAIKGEAMVELAAVERGLRVVKIAPQSLK
Ga0302325_128653571	3300031234	Palsa	MIFGVNATKSAVVIVETKGAGDKFAIIAIRPIPFEVRSGDDLAELLRRLAAIFDRGGRGANSTIA
Ga0302324_1002176801	3300031236	Palsa	VIFGINATKSAIIVAETRGAGSRFVITSIRSIPFQVRFGDDLAELLRSLCALLDRKGRGEGSVVALLKCSSGRFGSCLEAIKGEAMVELAAFQHGLRVIKVA
Ga0302324_1010700144	3300031236	Palsa	VILGISSTKSAIIIAETKGAGRRFVITGIRSIPFQVCFGDDLAELLRSLSVLIGHKGIGAGSVVALLKCSSGRFGSCLEAIKGEAMVELAAFQHGRRVFKVAPQSLKRTLGCAAD
Ga0302324_1014955401	3300031236	Palsa	VIFGISVTKSTIIVAETRGAGSRFVITSIRSIPFQVRFGDDLAELLRSFGALLDHKGKGASSVVALLKCSSGRFGSCLEAIKGEAMVELAAFQHGLRVIKVA
Ga0265325_100416231	3300031241	Rhizosphere	MILGISTTKSAVIIAETKGAGGSFVITAIRPIPFQVRSGDDLTELLQRLIVLFNRKGSGTASAIALLKCSSG
Ga0265325_105440281	3300031241	Rhizosphere	MIYGANATKSAVVISETQGAGGKFAVIAIKSVPFQVRSGNDLAELLQSLITLFDRKGKGAAPVIALLKCSSGRFGS
Ga0265339_104569031	3300031249	Rhizosphere	VIIGISTTKSAVIIAETKSVAGKFVITAIRPIPFQVRSGDDLDELLQSLNTLFAREGKGAGSVIALLKCSSGRFGSCLEAIKGE
Ga0302318_101217971	3300031258	Bog	VAVASFTADEDADGTFGLSFCRMIFGVNATKSAVVVAQTKGASAKFIITDIRPIAFRVRTGDDLVELLRTLCALFGRKGKSAGSVVALLKCSSGRFGSCLEAIKGEAMVEFAASQLGLRVVKVAPQSLKKALGCAKDQKW
Ga0265316_107205832	3300031344	Rhizosphere	MLFGVNATRSAVVFAETRGVGDKFVVTAIRPVPFQVRSGDDLAGLLQSLIALFDRKGKGAGSVIALLKCSSGRFGSCLEAIKGEAMVELAAAQ
Ga0311364_107650692	3300031521	Fen	MIFGINATKSAVVVAETKGAGGKFVVTIIRPIPFQAGCGTDLSELLQSLGTLLHRKGNGTDLVIALLKCSSGRFGSCLEAIKGEAMV
Ga0302326_101526451	3300031525	Palsa	VIFGISVTKSTIIVAETRGAGSRFVITSIRSIPFQVRFGDDLAELLRSFGALLDHKGKGASSVVALLKCSSGRFGSCLEAIKGEAMVELAAFQHGLRVIKV
Ga0265313_104510952	3300031595	Rhizosphere	MVCVRICHENANGMVRMLFGINATKSAVVVAETRGAGDKFVITAIRPIPFQVRSGDDLAGLLQTLITLFDRKGRGGGSIMALLKCSSGRFGSCLEAIKGEAMIELAA
Ga0311351_113051352	3300031722	Fen	MLFGVNATRSAVVIAETKGAGGKFVVTAIRPISFQVRFGDDLAELLQSLITLFDRKGKGAGSVIALLQCSSGRFGSCLEAIKGEAMVELAAAQRGLRVVKVAPQSLKKTL
Ga0302321_1003621641	3300031726	Fen	MIFGISTTKSAVVIAETKGVGDKFVATAIRPISFAVRSGDDLAELLQNLITIFHRKAKGTGSLIALLKCSSGRFGSCLEAIKGEAMVE
Ga0302321_1015018293	3300031726	Fen	MIFGVAATKTAVVIAETKGAGDKFVIIAIRPVPFEVRAGDNLAELLRCLSTIFDRGSRGASPTIALLKCSSGR
Ga0302321_1029050331	3300031726	Fen	MILGISTTKSAVIIAETKGAGGKFVISAIRPIPFLVRSGDDLTELLQSLSTLFDRKGRGSVIALLKCSSGRFGSCLEAIKGEAM
Ga0302322_1013841001	3300031902	Fen	MIFGVAATKTAIVIAETKGAGDKFVITAIKPVPFEVLAGDNLAELLRCLSTIFDRCSRGARPTIALLKCSSGRFGSCLE
Ga0302322_1014840061	3300031902	Fen	MILGMSATKSAVVVAQTKGVGAKFALTGIIPIPFQVGSGADLAELLLTLGTLFARQGKGVGSVLALLKCSSGRFGSCLEAIKGEAMIELAAFQHGLRVVKVAPQSLKKPLGGTPAQ
Ga0302322_1025509241	3300031902	Fen	MLFGVNATRSAVVIVETKGAGDKFVVTAIRPVPFQVRSGDDLAGLLQSLIALFDRKGRGAGSVIALLKCSSGRFGSCL
Ga0302322_1027385752	3300031902	Fen	MIFGINATKSAVMVAETKGAGGKFVVTVIRQIPIQVGCGMDLSELLHSLGTLFGRKGNGAGLVIALLKCSSGRFGSCLEAIKGEAMVELAAVQSGVRVVKVAPQSLKKTLGC
Ga0302322_1031135381	3300031902	Fen	MIFGVHATKSAVVVAQTEGAGAEFVLTAIKPISFQVGSGDDLAELLQTLSQQFERAGKGAGSVIALLKCSSGRFGSCLEAIKGEAMVELAAAQGG
Ga0335397_101326913	3300032420	Freshwater	MIFGVQATKSAVVIAETKGADDKFVVAAIRPILFQVRSGDDLAELLQSLITIFDRKGKGAGSVIALLKCSSGRFGSCLEAIKGEAMVELAASQR
Ga0316625_1026248941	3300033418	Soil	MIFGLNTTRAAIVIAETKGARNSFVITAIRPIPFQVRSGHDLADLLQTLITLFGRKGKGASSVIALLQCSS
Ga0316616_1033364582	3300033521	Soil	MIIGISTTKSAVVIAETMGAGGKFVVTTIRPIPFQVRSGDDLAELLQSLTTLLDRKGKGAGSVIALLKCSSGRFGSCLEAIKGEAMVELAAVQRGKRIVKV
Ga0316616_1035808301	3300033521	Soil	MILGVNATRSAVVVAETRGADDKFVVTAIRSIPFQVRHGDDLTQLLQSLSAIFGRLGKSAASAMVLLRCSSGRFGSCLEAIKGEAIIELAASQCGLR
Ga0334816_030448_3_257	3300033819	Soil	MLFGVNATRSAVVIVETKGAGDKFVVTAIRPVPFQVRSGDDLAGLLQSLIALFDRKGRGAGSVIALLKCSSGRFGSCLEAIKGEA
Ga0334848_069167_1_342	3300033827	Soil	MLFGVNATRSAVVIAETRGAGGKFVVTAIRPIPFQVRSGDDLTELLQSLIALFDRKGKGAGSVIALLKCSSGRFGSCLEAIKGEAMVELAAAQRGHHVVKVAPQSLKKTLGCAT
Ga0334822_038921_726_1046	3300034070	Soil	MLFGVNATGSAVVIAETRGAGGKFVVTAIRPVPFQVRSGDDLAELLQSLITLFDRKGKGAGSAIALLKCSSGRFGSCLEAIKGEAMVELAAAQRGLRVVKVAPQSLK
Ga0370489_0283796_240_500	3300034127	Untreated Peat Soil	MIFGISATKSTVVLAETKGAGDKFVVTSIGAIPFAVRSGDDLAELLQSLITLFARKGKGTGSVIALLKCTSGRFGSCLEAIKGEAMV
Ga0370507_0119900_493_825	3300034158	Untreated Peat Soil	MIFGVNSTKTAVVVAETKGAGDKFVITAIRPIPFQVRTGDDLAELLQNLITILDRKGKGAGSVIALLKCSSGRFGSCLEAIKGEAMVELAASQRGLRVVKVAPQGLKKTLG
Ga0370513_194661_2_253	3300034161	Untreated Peat Soil	MILGISTTKSAVIIAETKGAGGKFVITAIRPIPFQVRSGDDLTELLQNLIILFDRKGRGAASAIALLKCSSGRFGSCLEAIKGE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F058541

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences