Metagenome / Metatranscriptome Family F058610

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F058610
Family Type	Metagenome / Metatranscriptome
Number of Sequences	134
Average Sequence Length	43 residues
Representative Sequence	DELERVGGEILGGVNRSKAFRVMVAYFAFVHKLKNQTQTTLA
Number of Associated Samples	100
Number of Associated Scaffolds	134

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.52 %
% of genes near scaffold ends (potentially truncated)	96.27 %
% of genes from short scaffolds (< 2000 bps)	81.34 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (55.224 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog (28.358 % of family members)
Environment Ontology (ENVO)	Unclassified (47.761 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.269 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 48.57% β-sheet: 0.00% Coil/Unstructured: 51.43%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 134 Family Scaffolds
PF01751	Toprim	18.66
PF08751	TrwC	7.46
PF13604	AAA_30	6.72
PF13342	Toprim_Crpt	4.48
PF03432	Relaxase	4.48
PF00589	Phage_integrase	2.99
PF05930	Phage_AlpA	1.49
PF07107	WI12	0.75
PF03743	TrbI	0.75
PF10531	SLBB	0.75
PF13385	Laminin_G_3	0.75
PF13854	Kelch_5	0.75
PF09407	AbiEi_1	0.75
PF02661	Fic	0.75

COG ID	Name	Functional Category	% Frequency in 134 Family Scaffolds
COG3843	Type IV secretory pathway, VirD2 component (relaxase)	Intracellular trafficking, secretion, and vesicular transport [U]	4.48
COG3311	DNA-binding transcriptional regulator AlpA	Transcription [K]	1.49
COG2948	Type IV secretory pathway, VirB10 component	Intracellular trafficking, secretion, and vesicular transport [U]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	55.22 %
Unclassified	root	N/A	44.78 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	55.22 %
Unclassified	root	N/A	44.78 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	55.22 %
Unclassified	root	N/A	44.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.78 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	29.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	11.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.78 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	17.16 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	9.70 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.24 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.49 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.78 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	17.16 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.70 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.49 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.49 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.78 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	17.16 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.70 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.49 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.75 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.70 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.49 %
Acidicapsa	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa	0.75 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.75 %
Xanthomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Xanthomonas	0.75 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.70 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.49 %
Acidicapsa acidisoli	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	0.75 %
Edaphobacter aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	0.75 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.75 %
Xanthomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Xanthomonas	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300009618\|Ga0116127_1122490	Not Available	668	Open in IMG/M
3300009623\|Ga0116133_1022198	Not Available	1571	Open in IMG/M
3300009638\|Ga0116113_1060540	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	883	Open in IMG/M
3300009639\|Ga0116122_1283334	Not Available	509	Open in IMG/M
3300009643\|Ga0116110_1235995	Not Available	588	Open in IMG/M
3300009645\|Ga0116106_1117601	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	856	Open in IMG/M
3300009762\|Ga0116130_1205666	Not Available	624	Open in IMG/M
3300010339\|Ga0074046_10710729	Not Available	590	Open in IMG/M
3300014152\|Ga0181533_1315419	Not Available	564	Open in IMG/M
3300014153\|Ga0181527_1175999	All Organisms → cellular organisms → Bacteria	912	Open in IMG/M
3300014160\|Ga0181517_10306064	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	834	Open in IMG/M
3300014160\|Ga0181517_10457054	Not Available	649	Open in IMG/M
3300014161\|Ga0181529_10204111	Not Available	1157	Open in IMG/M
3300014161\|Ga0181529_10246829	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1020	Open in IMG/M
3300014161\|Ga0181529_10248982	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1014	Open in IMG/M
3300014161\|Ga0181529_10370370	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	781	Open in IMG/M
3300014165\|Ga0181523_10426546	Not Available	737	Open in IMG/M
3300014167\|Ga0181528_10006697	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6958	Open in IMG/M
3300014169\|Ga0181531_11002813	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	524	Open in IMG/M
3300014199\|Ga0181535_10373754	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	838	Open in IMG/M
3300014201\|Ga0181537_11060658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	548	Open in IMG/M
3300014490\|Ga0182010_10238731	All Organisms → cellular organisms → Bacteria	962	Open in IMG/M
3300014491\|Ga0182014_10159928	All Organisms → cellular organisms → Bacteria	1260	Open in IMG/M
3300014491\|Ga0182014_10183174	All Organisms → cellular organisms → Bacteria	1148	Open in IMG/M
3300014491\|Ga0182014_10238095	Not Available	962	Open in IMG/M
3300014491\|Ga0182014_10274636	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	874	Open in IMG/M
3300014491\|Ga0182014_10312520	Not Available	803	Open in IMG/M
3300014491\|Ga0182014_10606133	Not Available	528	Open in IMG/M
3300014492\|Ga0182013_10113404	All Organisms → cellular organisms → Bacteria → Acidobacteria	1794	Open in IMG/M
3300014493\|Ga0182016_10002286	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	22660	Open in IMG/M
3300014493\|Ga0182016_10046267	All Organisms → cellular organisms → Bacteria	3448	Open in IMG/M
3300014493\|Ga0182016_10171821	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1432	Open in IMG/M
3300014493\|Ga0182016_10538925	Not Available	670	Open in IMG/M
3300014498\|Ga0182019_10640738	Not Available	749	Open in IMG/M
3300014501\|Ga0182024_12797767	Not Available	519	Open in IMG/M
3300014502\|Ga0182021_11353365	Not Available	858	Open in IMG/M
3300014657\|Ga0181522_10422062	Not Available	799	Open in IMG/M
3300014838\|Ga0182030_10743915	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	909	Open in IMG/M
3300014838\|Ga0182030_11007753	Not Available	732	Open in IMG/M
3300014838\|Ga0182030_11230567	Not Available	637	Open in IMG/M
3300014839\|Ga0182027_10847717	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	951	Open in IMG/M
3300014839\|Ga0182027_12332406	Not Available	505	Open in IMG/M
3300016700\|Ga0181513_1270104	Not Available	560	Open in IMG/M
3300017929\|Ga0187849_1347784	Not Available	548	Open in IMG/M
3300017938\|Ga0187854_10153855	All Organisms → cellular organisms → Bacteria	1042	Open in IMG/M
3300017940\|Ga0187853_10284719	Not Available	751	Open in IMG/M
3300017941\|Ga0187850_10223824	Not Available	853	Open in IMG/M
3300017948\|Ga0187847_10174070	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1174	Open in IMG/M
3300017988\|Ga0181520_10175219	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1713	Open in IMG/M
3300018022\|Ga0187864_10123613	Not Available	1313	Open in IMG/M
3300018034\|Ga0187863_10094365	All Organisms → cellular organisms → Bacteria → Proteobacteria	1679	Open in IMG/M
3300018034\|Ga0187863_10194894	All Organisms → cellular organisms → Bacteria	1128	Open in IMG/M
3300018042\|Ga0187871_10173198	Not Available	1213	Open in IMG/M
3300018043\|Ga0187887_10588561	Not Available	657	Open in IMG/M
3300018046\|Ga0187851_10465898	Not Available	719	Open in IMG/M
3300018047\|Ga0187859_10750952	Not Available	557	Open in IMG/M
3300019787\|Ga0182031_1207795	All Organisms → cellular organisms → Bacteria	1303	Open in IMG/M
3300019788\|Ga0182028_1115649	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	760	Open in IMG/M
3300022861\|Ga0224528_1004189	All Organisms → cellular organisms → Bacteria	6627	Open in IMG/M
3300022861\|Ga0224528_1019101	All Organisms → cellular organisms → Bacteria → Proteobacteria	1660	Open in IMG/M
3300022872\|Ga0224526_1003990	All Organisms → cellular organisms → Bacteria	4282	Open in IMG/M
3300022872\|Ga0224526_1008195	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2705	Open in IMG/M
3300023068\|Ga0224554_1140763	Not Available	528	Open in IMG/M
3300023088\|Ga0224555_1105908	All Organisms → cellular organisms → Bacteria	872	Open in IMG/M
3300023090\|Ga0224558_1077801	All Organisms → cellular organisms → Bacteria → Proteobacteria	1227	Open in IMG/M
3300023090\|Ga0224558_1174522	Not Available	668	Open in IMG/M
3300023091\|Ga0224559_1016527	All Organisms → cellular organisms → Bacteria	3175	Open in IMG/M
3300023091\|Ga0224559_1024890	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2502	Open in IMG/M
3300023091\|Ga0224559_1044596	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1770	Open in IMG/M
3300023091\|Ga0224559_1284135	All Organisms → cellular organisms → Bacteria → Acidobacteria	552	Open in IMG/M
3300023101\|Ga0224557_1108354	Not Available	1104	Open in IMG/M
3300023248\|Ga0224525_1043950	Not Available	852	Open in IMG/M
3300025576\|Ga0208820_1055133	Not Available	1093	Open in IMG/M
3300027634\|Ga0209905_1021632	Not Available	913	Open in IMG/M
3300027662\|Ga0208565_1227333	Not Available	524	Open in IMG/M
3300028084\|Ga0255356_1019743	All Organisms → cellular organisms → Bacteria → Proteobacteria	1783	Open in IMG/M
3300028560\|Ga0302144_10018766	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2238	Open in IMG/M
3300028565\|Ga0302145_10013272	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3065	Open in IMG/M
3300028745\|Ga0302267_10070154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Xanthomonas	1835	Open in IMG/M
3300028748\|Ga0302156_10237614	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	839	Open in IMG/M
3300028765\|Ga0302198_10279821	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	792	Open in IMG/M
3300028779\|Ga0302266_10093774	Not Available	1237	Open in IMG/M
3300028779\|Ga0302266_10157932	All Organisms → cellular organisms → Bacteria	883	Open in IMG/M
3300028788\|Ga0302189_10071537	All Organisms → cellular organisms → Bacteria → Proteobacteria	1642	Open in IMG/M
3300028788\|Ga0302189_10152777	All Organisms → cellular organisms → Bacteria	996	Open in IMG/M
3300028866\|Ga0302278_10462642	Not Available	547	Open in IMG/M
3300028874\|Ga0302155_10071683	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1564	Open in IMG/M
3300028874\|Ga0302155_10278348	Not Available	721	Open in IMG/M
3300028909\|Ga0302200_10013815	All Organisms → cellular organisms → Bacteria	5502	Open in IMG/M
3300028909\|Ga0302200_10057120	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2244	Open in IMG/M
3300029908\|Ga0311341_10100277	All Organisms → cellular organisms → Bacteria → Proteobacteria	1967	Open in IMG/M
3300029910\|Ga0311369_10911868	Not Available	701	Open in IMG/M
3300029911\|Ga0311361_10114972	All Organisms → cellular organisms → Bacteria → Proteobacteria	3728	Open in IMG/M
3300029914\|Ga0311359_10365493	Not Available	1156	Open in IMG/M
3300029916\|Ga0302148_1030934	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1556	Open in IMG/M
3300029918\|Ga0302143_1033476	Not Available	1176	Open in IMG/M
3300029919\|Ga0302141_1204067	Not Available	536	Open in IMG/M
3300029922\|Ga0311363_10338097	All Organisms → cellular organisms → Bacteria → Proteobacteria	1653	Open in IMG/M
3300029952\|Ga0311346_10198120	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2251	Open in IMG/M
3300029952\|Ga0311346_10737734	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	845	Open in IMG/M
3300029953\|Ga0311343_10195983	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2106	Open in IMG/M
3300029953\|Ga0311343_10836983	Not Available	745	Open in IMG/M
3300029955\|Ga0311342_10863437	All Organisms → cellular organisms → Bacteria → Acidobacteria	688	Open in IMG/M
3300029984\|Ga0311332_10620585	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	855	Open in IMG/M
3300029985\|Ga0302280_1166851	All Organisms → cellular organisms → Bacteria → Proteobacteria	789	Open in IMG/M
3300029988\|Ga0302190_10198663	Not Available	826	Open in IMG/M
3300030020\|Ga0311344_11449274	Not Available	501	Open in IMG/M
3300030041\|Ga0302274_10044112	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2683	Open in IMG/M
3300030041\|Ga0302274_10101997	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1546	Open in IMG/M
3300030044\|Ga0302281_10297517	Not Available	644	Open in IMG/M
3300030045\|Ga0302282_1029567	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2762	Open in IMG/M
3300030045\|Ga0302282_1202922	Not Available	749	Open in IMG/M
3300030518\|Ga0302275_10022473	All Organisms → cellular organisms → Bacteria	5275	Open in IMG/M
3300030519\|Ga0302193_10564038	Not Available	554	Open in IMG/M
3300030688\|Ga0311345_10811861	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	731	Open in IMG/M
3300031258\|Ga0302318_10098360	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1301	Open in IMG/M
3300031259\|Ga0302187_10520263	All Organisms → cellular organisms → Bacteria → Proteobacteria	542	Open in IMG/M
3300031261\|Ga0302140_10549863	Not Available	881	Open in IMG/M
3300031524\|Ga0302320_10475417	Not Available	1528	Open in IMG/M
3300031524\|Ga0302320_11192397	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	781	Open in IMG/M
3300031671\|Ga0307372_10260588	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1024	Open in IMG/M
3300031712\|Ga0265342_10439796	Not Available	670	Open in IMG/M
3300031788\|Ga0302319_10179600	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	2740	Open in IMG/M
3300033405\|Ga0326727_10186929	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2312	Open in IMG/M
3300033405\|Ga0326727_10739689	Not Available	775	Open in IMG/M
3300033818\|Ga0334804_054004	Not Available	1154	Open in IMG/M
3300033822\|Ga0334828_067108	Not Available	943	Open in IMG/M
3300033890\|Ga0334810_000626	All Organisms → cellular organisms → Bacteria → Acidobacteria	12417	Open in IMG/M
3300033983\|Ga0371488_0024001	All Organisms → cellular organisms → Bacteria	4350	Open in IMG/M
3300034130\|Ga0370494_004094	All Organisms → cellular organisms → Bacteria	3876	Open in IMG/M
3300034130\|Ga0370494_047338	Not Available	1090	Open in IMG/M
3300034282\|Ga0370492_0195364	Not Available	825	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.25%
Host-Associated	Host-Associated	0.75%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	71.64%
Aquatic	Environmental → Aquatic	27.61%
Plants	Host-Associated → Plants	0.75%

Habitat	Taxonomy	Distribution
Peat	Environmental → Terrestrial → Peat	50.00%
Freshwater	Environmental → Aquatic → Freshwater	27.61%
Soil	Environmental → Terrestrial → Soil	21.64%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified	50.00%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	27.61%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	20.15%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	0.75%
Clay	Environmental → Terrestrial → Soil → Clay	0.75%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	50.00%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	21.64%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	17.16%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	5.97%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.99%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	0.75%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	28.36%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	14.18%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	11.94%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	11.19%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	9.70%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	5.97%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	4.48%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	4.48%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	2.24%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	2.24%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.75%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.75%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	0.75%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.75%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.75%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.75%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300009618	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_100	Environmental	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009638	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_10	Environmental	Open in IMG/M
3300009639	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_40	Environmental	Open in IMG/M
3300009643	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40	Environmental	Open in IMG/M
3300009645	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40	Environmental	Open in IMG/M
3300009762	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_40	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300014151	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_60_metaG	Environmental	Open in IMG/M
3300014152	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_60_metaG	Environmental	Open in IMG/M
3300014153	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_60_metaG	Environmental	Open in IMG/M
3300014160	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaG	Environmental	Open in IMG/M
3300014161	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_30_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014167	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014490	Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016700	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017929	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017941	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_150	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300018022	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300019787	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300019788	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (PacBio error correction)	Environmental	Open in IMG/M
3300022861	Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T25	Environmental	Open in IMG/M
3300022872	Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T-25	Environmental	Open in IMG/M
3300023068	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 20-24	Environmental	Open in IMG/M
3300023088	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 30-34	Environmental	Open in IMG/M
3300023090	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 20-24	Environmental	Open in IMG/M
3300023091	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 30-34	Environmental	Open in IMG/M
3300023101	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 10-14	Environmental	Open in IMG/M
3300023248	Peat soil microbial communities from Stordalen Mire, Sweden - C.F.S.T100	Environmental	Open in IMG/M
3300025576	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40 (SPAdes)	Environmental	Open in IMG/M
3300027634	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 812S1M	Environmental	Open in IMG/M
3300027662	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG (SPAdes)	Environmental	Open in IMG/M
3300028084	Peat soil microbial communities from Stordalen Mire, Sweden - H.B.S.T100	Environmental	Open in IMG/M
3300028560	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E2_2	Environmental	Open in IMG/M
3300028565	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E2_3	Environmental	Open in IMG/M
3300028745	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_3	Environmental	Open in IMG/M
3300028748	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_2	Environmental	Open in IMG/M
3300028765	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_2	Environmental	Open in IMG/M
3300028779	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_2	Environmental	Open in IMG/M
3300028788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_2	Environmental	Open in IMG/M
3300028866	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_2	Environmental	Open in IMG/M
3300028874	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_1	Environmental	Open in IMG/M
3300028909	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_1	Environmental	Open in IMG/M
3300029908	II_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300029911	III_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029914	III_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029916	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E3_1	Environmental	Open in IMG/M
3300029918	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E2_1	Environmental	Open in IMG/M
3300029919	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_2	Environmental	Open in IMG/M
3300029922	III_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029952	II_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029953	II_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029955	II_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029984	I_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029985	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_1	Environmental	Open in IMG/M
3300029988	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_3	Environmental	Open in IMG/M
3300030020	II_Bog_N1 coassembly	Environmental	Open in IMG/M
3300030041	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_1	Environmental	Open in IMG/M
3300030044	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_2	Environmental	Open in IMG/M
3300030045	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_3	Environmental	Open in IMG/M
3300030518	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_2	Environmental	Open in IMG/M
3300030519	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_3	Environmental	Open in IMG/M
3300030688	II_Bog_N2 coassembly	Environmental	Open in IMG/M
3300031258	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_1	Environmental	Open in IMG/M
3300031259	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E1_3	Environmental	Open in IMG/M
3300031261	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_1	Environmental	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031671	Soil microbial communities from Risofladan, Vaasa, Finland - OX-1	Environmental	Open in IMG/M
3300031712	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG	Host-Associated	Open in IMG/M
3300031788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033818	Peat soil microbial communities from Stordalen Mire, Sweden - 713 S-3-M	Environmental	Open in IMG/M
3300033822	Peat soil microbial communities from Stordalen Mire, Sweden - 714 S1 5-9	Environmental	Open in IMG/M
3300033890	Peat soil microbial communities from Stordalen Mire, Sweden - 713 E-1-M	Environmental	Open in IMG/M
3300033983	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB23AN SIP fraction	Environmental	Open in IMG/M
3300034130	Peat soil microbial communities from wetlands in Alaska, United States - Collapse_03_16	Environmental	Open in IMG/M
3300034282	Peat soil microbial communities from wetlands in Alaska, United States - Eight_mile_03D_16	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0116127_11224901	3300009618	Peatland	FEIADELERVGGEVLGGVNRSKAFRVMVAHFAFVYKLKIPTRATVA*
Ga0116133_10221981	3300009623	Peatland	LERVGGEVLGGVNRSKAFRVMVAYFASVHKLKNQTQTPSA*
Ga0116113_10605401	3300009638	Peatland	TYDIADELERVGGEILGGVNRSKTFRVMVAYFASIHKLKTPTQTFA*
Ga0116122_12833342	3300009639	Peatland	ELERVGGEILGGVNRSKAFRVMVAYFAFVHKLKNQTQTTPA*
Ga0116110_12359951	3300009643	Peatland	VGGEVLGGVNRSKAFRVMVAYFASIYKLKSPTYTTGA*
Ga0116106_11176011	3300009645	Peatland	EIADELERVGGEVLGGVNRSKAFRVMVAYFAFVHKLKNQTQTTFA*
Ga0116130_12056662	3300009762	Peatland	ERVGGEVLGGVNRSKAFRVMVAYFASIYKLKSPIFTTGA*
Ga0074046_107107292	3300010339	Bog Forest Soil	YEIADELERVGGEVLCGVNRSKAFRVMVAYFAFVHKLKSATQAAVA*
Ga0181539_11946482	3300014151	Bog	GGEILGGVNRSKAFRVMVAYFAFVHKLKIQTRTTLA*
Ga0181533_13154192	3300014152	Bog	PLTHEIADELERVGGEFLGGVNRSKAFRVMVAYFAFVHKLKNQTQTTGA*
Ga0181527_11759991	3300014153	Bog	DELERVGGEILGGVNRSKAFRVMVAYFAFVHKLKNQTQTPGA*
Ga0181517_103060641	3300014160	Bog	ELERIGGEVLGGVNCSKTFRVMVAYFASIYKLKNPTQTTYA*
Ga0181517_104570541	3300014160	Bog	LTYEIADELERVGGEVLGGVNRSKAFRVMVAYFASIYKLKSPTYTTGA*
Ga0181529_102041111	3300014161	Bog	FPLTFEIADELERVGGEVLGGVNRSKAFRVMVAYFAFVHKLKNQSQTAPV*
Ga0181529_102468291	3300014161	Bog	DELERVGGEVLGGVNRSKAFRVMVAYFASIYKLKSPTYTTVA*
Ga0181529_102489822	3300014161	Bog	ERVGGEILGGVNRSKTFRVMVAYFASVHKLKTPTQTFA*
Ga0181529_103703702	3300014161	Bog	IADELERVGGEVLGGVNRSKAFRVMVAYFAFVHKLNNQTQTTHA*
Ga0181523_104265461	3300014165	Bog	LERVGGEILGGVNRSKAFRVMVAYLAFVHKLKNQTQTAPA*
Ga0181528_100066973	3300014167	Bog	LERVGGEILGGVNRSKAFRVMVAYLAFVHKLKNQTQTTPA*
Ga0181531_110028132	3300014169	Bog	FVFPLTYEIADELERVGGEVLCGVNRSKAFRVMVAYFAFVHKLKNQTQTTPA*
Ga0181535_103737542	3300014199	Bog	DELERVGGEILGGVNKSKTFRVMVAYFASIHKLKTPTQTFV*
Ga0181537_110606581	3300014201	Bog	DELERVGGEILGGVNKSKTFRVMVAYFASIHKLKTPTQTFA*
Ga0182010_102387311	3300014490	Fen	TYEIADELERVGGEVLCGVNRSKAFRVMVAYFAFVHKLKNQTQTTPT*
Ga0182014_101599282	3300014491	Bog	VGGEILGGVNRSKAFRVMVAYFAFVHKLKNQTQTTPA*
Ga0182014_101831741	3300014491	Bog	EILGGVNRSKAFRVMVAYFAFINKLKNPAPITVA*
Ga0182014_102380952	3300014491	Bog	FVFPLTFEIADELERVGGEVLCGVNRSKAFRVMVAYFAFVNKLKNPT*
Ga0182014_102746362	3300014491	Bog	LTYDIADELERVGGEILGGVNRSKTFRVMVAYFASIHKLKTPTQTFA*
Ga0182014_103125201	3300014491	Bog	ERIGGEVLCGVNRSKAFRVMVAYFAFVHKLKIPTPTALA*
Ga0182014_106061331	3300014491	Bog	HEIADDLDRVGGEILGGVNRSKTFRVMVAYFAAVHKLKNQTQTTPA*
Ga0182013_101134043	3300014492	Bog	GGEILGGVNRSKAFRVMVAYFAFVHKLKNQTQTPPA*
Ga0182016_100022861	3300014493	Bog	VGGEILGGVNRSKTFRVMVAYFAFVHKLKNQTQTTLT*
Ga0182016_100462673	3300014493	Bog	ADELERVGGEVLGGVNRSKAFRVMVAYFASIYKLKSPTYTTGA*
Ga0182016_101718211	3300014493	Bog	FPLTFEIADELERVGGEILGGVNRSKAFRVMVAYYAFVHKLKNQTQTTPA*
Ga0182016_105389252	3300014493	Bog	DELERVGGEILGGVNRSKTFRVMVAYFASIHKLKTPTQTFA*
Ga0182019_106407381	3300014498	Fen	RIGGEVLCGVNRSKAFRVMVAYFAFVYKLKVPAQATVA*
Ga0182024_127977671	3300014501	Permafrost	ERVGGEVLGGVNRSKAFRVMVAYFAFVHKLKNQTQTTLA*
Ga0182021_113533651	3300014502	Fen	DELDRVGGEILGGVNRSKTFRVMVAYFAFVHQLKTPVQSTFA*
Ga0181522_104220622	3300014657	Bog	IADELERVGGEVLGGVNRSKAFRVMVAYFAFVHKLKNQTQTTLA*
Ga0182030_107439151	3300014838	Bog	ELERVGGEVLGGVNRSKAFRVMVAYFAFVHKLKNQIQTTPT*
Ga0182030_110077532	3300014838	Bog	VFPLTYEIADELERVGGEILCGVNRSKAFRVMVAYFAFVHKLKSPTQGTVA*
Ga0182030_112305671	3300014838	Bog	PLTFEIADELERVGGEVLGGVNRSKAFRVMVAHFAFVYKLKIPTRATVA*
Ga0182027_108477172	3300014839	Fen	EIADELERVGGEVLGGVNRSKAFRVMVAYFASIYKLKSPTYTTGA*
Ga0182027_123324061	3300014839	Fen	PLTFEIADELERVGGEILGGVNRSKAFRVMVAYFAFVHKLKIPTRATVA*
Ga0181513_12701042	3300016700	Peatland	DIADELERVGGEILGGVNRSKTFRVMVAYFASIHKLKTPTQTFA
Ga0187849_13477841	3300017929	Peatland	DELERVGGEVLCGVNRSKAFRVMVAYFAFVHKLKNPTQAAVA
Ga0187854_101538552	3300017938	Peatland	ADELERVGGEILGGVNGSKAFRVMVAYYAFVHKLKNQTQTTPA
Ga0187853_102847191	3300017940	Peatland	PLTFEIADELERVGGEILGGVNRSKAFRVMVAYYAFVHKLKNQTQTTPA
Ga0187850_102238241	3300017941	Peatland	ADELDRVGGEILGGVNRSKTFRVMVAYFAFVHKLKNQTQTTPA
Ga0187847_101740702	3300017948	Peatland	FPLTYEIADELERIGGEVLGGVNSSKTFRVMVAYFASIYKLKSPTKITYA
Ga0181520_101752192	3300017988	Bog	FPLTYEIADELERVGGEVLGGVNRSKAFRVMVAYFASIYKLKSPTYTTGA
Ga0187864_101236133	3300018022	Peatland	RVGGEVLCGVNRSKAFRVMVAYFAFVHKLKNPTQAAVA
Ga0187863_100943652	3300018034	Peatland	ADELERVGGEVLGGVNRSKAFRVMVAYFAFVHKLKNQSQTAPV
Ga0187863_101948941	3300018034	Peatland	RVGGEILGGVNRSKTFRVMVAYFAFVHKLKIPVQPTFA
Ga0187871_101731981	3300018042	Peatland	EIADELERVGGEILGGVNRSKAFRVMVAYFAFVHKLKNQTQTTLA
Ga0187887_105885612	3300018043	Peatland	VGGEVLGGVNRSKTFRVMVAYFASIYKLKSQTQTVPA
Ga0187851_104658983	3300018046	Peatland	IDTAFVFPLTYEIADELERIGGEILCGVNRSKAFRVMVAYFAFVHKLKSPTQATVA
Ga0187859_107509521	3300018047	Peatland	IADELERVGGEVLGGVNRSKAFRVMVAYFASIYKLKSPTYTTGA
Ga0182031_12077953	3300019787	Bog	ADELERVGGEILGGVNRSKAFRVMVAYLAFVHKLKNQTQTTPA
Ga0182028_11156492	3300019788	Fen	IADELERVGGEILGGVNRSKAFRVMVAYYAFVHKLKNQTQTTPA
Ga0224528_100418911	3300022861	Soil	IADELERVGGEILGGVNRSKAFRVMVAYFAFVHKLKNQTQTTLA
Ga0224528_10191012	3300022861	Soil	IADELERVGGEILGGVNRSKAFRVMVAYFAFVHKLKNQTQTTFA
Ga0224526_10039901	3300022872	Soil	DELERVGGEVLGGVNRSKAFRVMVAYFASIYKLKSPTYTTGA
Ga0224526_10081951	3300022872	Soil	ERVGGEILGGVNRSKAFRVMVAYYAFVHKLKNQTQTTPA
Ga0224554_11407633	3300023068	Soil	DELERVGGEVLGGVNRSKAFRVRVAYFAFVHKLKNQTQTAPA
Ga0224555_11059082	3300023088	Soil	VFPLTFEIADELERVGGEILGGVNRSKAFRVMVAYFAFVHKLKNQTQTTPA
Ga0224558_10778013	3300023090	Soil	FPLTFEIADELERVGGEVLGGVNRSKAFRVMVAYFAFVHKLKNQTQTTLA
Ga0224558_11745221	3300023090	Soil	VGGEVLCGVNRSKAFRVMVAYFAFVHKLKNPTQAAVA
Ga0224559_10165271	3300023091	Soil	LERVGGEVLGGVNRSKAFRVMVAYFAFVHKLKNQTQTTIA
Ga0224559_10248901	3300023091	Soil	EIADELERVGGEVLGGVNRSKAFRVMVAYFASIYKLKSPTYTTGA
Ga0224559_10445962	3300023091	Soil	VFPLTYEIADELERDGGEVLGGVNRSKAFRVMVAYFASIYKLKSPTYTTGA
Ga0224559_12841351	3300023091	Soil	EIADELERVGGEILGGVNRSKAFRVMVAYFAFVHKLKNQTQTAPA
Ga0224557_11083542	3300023101	Soil	EIADELERVGGEVLGGVNRSKAFRVMVAYFAFVNKLKNQKQTTPA
Ga0224557_12618821	3300023101	Soil	IADELDRVGGEVLGGVNRSKAFRVMVAYFAFVLKLKYQTRTTLA
Ga0224525_10439501	3300023248	Soil	ELERVGGEVLCGVNRSKAFRVMVAYFAFVYKLKNQTQTTPA
Ga0208820_10551331	3300025576	Peatland	ERVGGEILGGVNRSKAFRVMVAYFAFVHKLKNPTQAAVA
Ga0209905_10216321	3300027634	Thawing Permafrost	ELERVGGEVLGGVNRSKTFRVMVAYFASIYKLKSQTQTVPALSSR
Ga0208565_12273331	3300027662	Peatlands Soil	YEIADELERIGGEILCGVNRSKAFRVMVAYFAFVHKLKNPTQVVGA
Ga0255356_10197432	3300028084	Soil	FEIADELERVGGEILGGVNRSKAFRVMVAYFAFVHKLKNQTQTTLA
Ga0302144_100187662	3300028560	Bog	LERVGGEILGGVNRSKAFRVMVAYYAFVHKLKNQTQTTPA
Ga0302145_100132723	3300028565	Bog	FPLTFEIADELERVGGEILGGVNRSKAFRVMVAYYAFVHKLKNQTQTIPA
Ga0302267_100701542	3300028745	Bog	ELERVGGEVLGGVNRSKAFRVMVAYFAFVHKLKNQTQTTPA
Ga0302156_102376142	3300028748	Bog	PLTYDIADELERVGGEILGGVNRSKTFRVMVAYFASIHKLKTPTQTFA
Ga0302198_102798211	3300028765	Bog	ELDRVGGEILGGVNRSKTFRVMVAYFAFVHKLKNQTQTAGA
Ga0302266_100937742	3300028779	Bog	LTFEIADELERVGGEILGGVNRSKTFRVMVAYFAFVHKLKNQTQATPA
Ga0302266_101579322	3300028779	Bog	GGEILGGVNRSKAFRVMVAYYAFVHKLKNQTQTTPA
Ga0302189_100715371	3300028788	Bog	DELERVGGEILGGVNRSKAFRVMVAYFAFVHKLKNQTQTTFA
Ga0302189_101527771	3300028788	Bog	ADELERVGGEILGGVNRSKAFRVMVAYYAFVHKLKNQTQTTPA
Ga0302278_104626423	3300028866	Bog	LERVGGEVLGGVNRSKAFRVMVAYFAFVHKLKNQTQTAPA
Ga0302155_100716831	3300028874	Bog	ADELDRVGGEILGGVNRSKTFRVMVAYFAFVHKLKNQTQTTLA
Ga0302155_102783481	3300028874	Bog	ERVGGEILGGVNRSKTFRVMVAYFASVYKLKSPTPVYVA
Ga0302200_100138155	3300028909	Bog	TYEIADELERVGGEVLGGVNRSKAFRVMVAYFASIYKLKSPTYTTAA
Ga0302200_100571201	3300028909	Bog	TYEIADELERVGGEVLGGVNRSKAFRVMVAYFASIYKLKSPTYTTGA
Ga0311341_101002773	3300029908	Bog	LTFEIADELERVGGEVLGGVNRSKAFRVMVAYFAFVHKLKNQTQTTLA
Ga0311369_109118682	3300029910	Palsa	THEIADELERVGGEILGGVNRSKTFRVMVAYFASIHKLKTPTQIFA
Ga0311361_101149721	3300029911	Bog	ADELERVGGEILGGVNKSKTFRVMVAYFAAVHKLKIPAKPAFK
Ga0311359_103654931	3300029914	Bog	LERVGGEVLGGVNRSKAFRVMVAYFAFVHKLKNQTQTTLA
Ga0302148_10309341	3300029916	Bog	GEVLGGVNRSKAFRVMVAYFAFVHKLKNQTQTTPA
Ga0302143_10334761	3300029918	Bog	RVGGEILGGVNRSKTFRVMVAYFAFVHKLKNQTQATSA
Ga0302141_12040671	3300029919	Bog	LTFEIADELERVGGEILGGVNRSKAFRVMVAYFAFVHKLKNQTQTTFA
Ga0311363_103380971	3300029922	Fen	ERVGGEVLGGVNRSKAFRVMVAYFAFVHKLKNQTQTTPA
Ga0311346_101981201	3300029952	Bog	GEILGGVNRSKAFRVMVAYYAFVHKLKNQTQTTPA
Ga0311346_107377342	3300029952	Bog	LTYEIADELERVGGEVLGGVNRSKAFRVMVAYFASIYKLKSPTYTTGA
Ga0311343_101959831	3300029953	Bog	VGGEILGGVNRSKAFRVMVAYYAFVHKLKNQTQTTPA
Ga0311343_108369831	3300029953	Bog	ELDRVGGEILGGVNRSKAFRVMVAYFAFVHKLKNQTQTTLA
Ga0311342_108634372	3300029955	Bog	EIADELERVGGEVLGGVNRSKAFRVMVAYFAFVHKLKNQTQTAPA
Ga0311332_106205851	3300029984	Fen	FPLTFEIADELERVGGEVLGGVNRSKAFRVMVAYFAFVHKLKNQTQTTIA
Ga0302280_11668512	3300029985	Fen	FVFPLTFEIADELERVGGEVLGGVNRSKAFRVMVAYFAFVHKLKNQTQTTLA
Ga0302190_101986631	3300029988	Bog	GGEILGGVNRSKTFRVMVAYFAFVHKLKNQTQATSA
Ga0311344_114492742	3300030020	Bog	RVGGEVLGGVNRSKAFRVMVAYFAFVHKLKNQTQTTPA
Ga0302274_100441126	3300030041	Bog	DELERVGGEVLGGVNRSKAFRVMVAYFAFVHKLKNQTQTAPA
Ga0302274_101019971	3300030041	Bog	EIADELERVGGEILGGVNRSKAFRVMVAYYAFVHKLKNQTQTTPA
Ga0302281_102975171	3300030044	Fen	FPLTFDIADELERVGGEILCGVNRSKAFRVMVAYFAFIHKLKNQTQTTPA
Ga0302282_10295672	3300030045	Fen	VFPLTFEIADELERVGGEILCGVNRSKAFRVMVAYFAFIHKLKNQTQTTPA
Ga0302282_12029221	3300030045	Fen	LERVGGEILGGVNKSKTFRVMVAYFAFVYKLKNQTQPTLA
Ga0302275_100224735	3300030518	Bog	LERVGGEILGGVNRSKTFRVMVAYFASIHKLKTPTQTFA
Ga0302193_105640381	3300030519	Bog	RVGGEILGGVNRSKAFRVMVAYYAFVHKLKNQTQTTPA
Ga0311345_108118611	3300030688	Bog	DELERVGGEVLGGVNRSKAFRVMVAYFASIYKLKSKTLTTSA
Ga0302318_100983602	3300031258	Bog	ELERVGGEVLGGVNRSKAFRVMVAYFASIYKLKSPTYTTAA
Ga0302187_105202631	3300031259	Bog	PLTFEIADELERVGGEVLGGVNRSKAFRVMVAYFAFVHKLKNQTQTTLA
Ga0302140_105498631	3300031261	Bog	DELERVGGEILGGVNRSKAFRVMVAYFAFVHKLKNQTQTTLA
Ga0302320_104754171	3300031524	Bog	GEILCGVNRSKAFRVMVAYFAFVHKLKNPTQVAVA
Ga0302320_111923972	3300031524	Bog	TFEITDELERVGGEVLGGVNRSKAFRVMVAYLAFIHKLKSPTQTNFA
Ga0307372_102605882	3300031671	Soil	VFPLTHEIADELERIGGEVLGGVNRSKAFRVMVAYFASIYKLKNKTQTTSA
Ga0265342_104397962	3300031712	Rhizosphere	ELERVGGEILGGVNRSKAFRVMVAYFAFVHKLKIPVQPTFA
Ga0302319_101796001	3300031788	Bog	LERVGGEILGGVNRSKAFRVMVAYFAFVYKLKIPTRATVA
Ga0326727_101869292	3300033405	Peat Soil	ERVGGEILGGVNRSKTFRVMVAYFASIHKLKTPTQTFA
Ga0326727_107396891	3300033405	Peat Soil	FVFPLTFEIADELERVGGEILGGVNRSKAFRVMVAYFAFVHKLKNQTQTTPA
Ga0334804_054004_3_146	3300033818	Soil	THEIADELDRVGGEILGGVNRSKTFRVMVAYFAFVHKLKIPVQPTFA
Ga0334828_067108_171_293	3300033822	Soil	MERVGGEVLGGVNRSKAFRVMVAYFAFAHKLKNQTQTTPA
Ga0334810_000626_1186_1308	3300033890	Soil	MERVGGEVLGGVNRSKAFRVMVAYFAFVHKLKNQTQTTFA
Ga0371488_0024001_1_138	3300033983	Peat Soil	EIADELERVGGEVLGGVNRSRAFRVMVAYFAFVHKLKNQTQTTLA
Ga0370494_004094_4_150	3300034130	Untreated Peat Soil	LTFDIADELERVGGEILGGVNRSKAFRVMVAYYAFVHKLKNQTQTIPA
Ga0370494_047338_965_1090	3300034130	Untreated Peat Soil	LTFEIADELERVGGEVLGGVNRSKAFRVMVAYFAFVHKLKN
Ga0370492_0195364_677_823	3300034282	Untreated Peat Soil	LTYEIADELERVGGEILGGVNKSKTFRVMVAYFAFVYKLKNQTQPTLA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F058610

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences