Metagenome / Metatranscriptome Family F058757

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F058757
Family Type	Metagenome / Metatranscriptome
Number of Sequences	134
Average Sequence Length	51 residues
Representative Sequence	RNLRVFETDDPAVLMVLEKAGTGRGEYGIERDEGLVADLRLYARALELL
Number of Associated Samples	113
Number of Associated Scaffolds	134

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	97.76 %
% of genes from short scaffolds (< 2000 bps)	93.28 %
Associated GOLD sequencing projects	107
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.63

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (94.776 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (44.776 % of family members)
Environment Ontology (ENVO)	Unclassified (56.716 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.269 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 20.78% β-sheet: 28.57% Coil/Unstructured: 50.65%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.63
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.63
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 134 Family Scaffolds
PF07883	Cupin_2	47.76
PF13676	TIR_2	0.75
PF00912	Transgly	0.75
PF11306	DUF3108	0.75
PF07885	Ion_trans_2	0.75

COG ID	Name	Functional Category	% Frequency in 134 Family Scaffolds
COG0744	Penicillin-binding protein 1B/1F, peptidoglycan transglycosylase/transpeptidase	Cell wall/membrane/envelope biogenesis [M]	0.75
COG4953	Membrane carboxypeptidase/penicillin-binding protein PbpC	Cell wall/membrane/envelope biogenesis [M]	0.75
COG5009	Membrane carboxypeptidase/penicillin-binding protein	Cell wall/membrane/envelope biogenesis [M]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.78 %
Unclassified	root	N/A	5.22 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.78 %
Unclassified	root	N/A	5.22 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.78 %
Unclassified	root	N/A	5.22 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	52.24 %
Unclassified	root	N/A	5.22 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	52.24 %
Unclassified	root	N/A	5.22 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	11.94 %
Unclassified	root	N/A	5.22 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.75 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	8.96 %
Unclassified	root	N/A	5.22 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2.99 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.75 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	8.96 %
Unclassified	root	N/A	5.22 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2.99 %
Beijerinckia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Beijerinckia	0.75 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	8.96 %
Unclassified	root	N/A	5.22 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2.99 %
unclassified Beijerinckia	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Beijerinckia → unclassified Beijerinckia	0.75 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	8.96 %
Unclassified	root	N/A	5.22 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2.99 %
Beijerinckia sp. 28-YEA-48	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Beijerinckia → unclassified Beijerinckia → Beijerinckia sp. 28-YEA-48	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004633\|Ga0066395_10948801	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	523	Open in IMG/M
3300005175\|Ga0066673_10274349	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	980	Open in IMG/M
3300005450\|Ga0066682_10978475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	500	Open in IMG/M
3300005467\|Ga0070706_100949013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	794	Open in IMG/M
3300005554\|Ga0066661_10350283	All Organisms → cellular organisms → Bacteria	904	Open in IMG/M
3300005557\|Ga0066704_10943089	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	533	Open in IMG/M
3300005764\|Ga0066903_102926449	All Organisms → cellular organisms → Bacteria	926	Open in IMG/M
3300006871\|Ga0075434_102115465	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300006904\|Ga0075424_101491499	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300009143\|Ga0099792_11111560	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	533	Open in IMG/M
3300009700\|Ga0116217_10569344	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	707	Open in IMG/M
3300010048\|Ga0126373_12537303	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300010339\|Ga0074046_10597570	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	653	Open in IMG/M
3300010361\|Ga0126378_12542778	Not Available	585	Open in IMG/M
3300010376\|Ga0126381_102940052	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300010398\|Ga0126383_10092956	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2671	Open in IMG/M
3300011120\|Ga0150983_10258315	All Organisms → cellular organisms → Bacteria	885	Open in IMG/M
3300011120\|Ga0150983_13474107	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300012203\|Ga0137399_10171641	All Organisms → cellular organisms → Bacteria	1746	Open in IMG/M
3300012207\|Ga0137381_11433984	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	582	Open in IMG/M
3300012212\|Ga0150985_122434073	All Organisms → cellular organisms → Bacteria	1908	Open in IMG/M
3300012361\|Ga0137360_10281022	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1377	Open in IMG/M
3300012923\|Ga0137359_11622940	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	534	Open in IMG/M
3300012971\|Ga0126369_12497919	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300015241\|Ga0137418_10381257	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1155	Open in IMG/M
3300015372\|Ga0132256_102363246	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300016319\|Ga0182033_10441314	All Organisms → cellular organisms → Bacteria	1108	Open in IMG/M
3300016319\|Ga0182033_12017039	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	526	Open in IMG/M
3300016319\|Ga0182033_12025506	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	524	Open in IMG/M
3300016341\|Ga0182035_11270611	Not Available	659	Open in IMG/M
3300016387\|Ga0182040_10549515	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	929	Open in IMG/M
3300016387\|Ga0182040_11798763	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	524	Open in IMG/M
3300016387\|Ga0182040_11884394	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	513	Open in IMG/M
3300016404\|Ga0182037_11891633	Not Available	534	Open in IMG/M
3300016422\|Ga0182039_11976046	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	536	Open in IMG/M
3300016422\|Ga0182039_12044969	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	527	Open in IMG/M
3300016445\|Ga0182038_10136653	All Organisms → cellular organisms → Bacteria	1848	Open in IMG/M
3300016445\|Ga0182038_11067447	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	717	Open in IMG/M
3300016445\|Ga0182038_12080742	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300017970\|Ga0187783_10753896	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	702	Open in IMG/M
3300017975\|Ga0187782_11672841	Not Available	503	Open in IMG/M
3300018431\|Ga0066655_11083456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Beijerinckia → unclassified Beijerinckia → Beijerinckia sp. 28-YEA-48	559	Open in IMG/M
3300021170\|Ga0210400_10836043	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	754	Open in IMG/M
3300021178\|Ga0210408_11171578	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300021401\|Ga0210393_10072130	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2727	Open in IMG/M
3300021404\|Ga0210389_10222765	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1473	Open in IMG/M
3300021439\|Ga0213879_10157594	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	661	Open in IMG/M
3300021444\|Ga0213878_10393251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	603	Open in IMG/M
3300021474\|Ga0210390_11241400	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300021478\|Ga0210402_11274182	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300021560\|Ga0126371_10387156	All Organisms → cellular organisms → Bacteria	1538	Open in IMG/M
3300021560\|Ga0126371_10853000	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1056	Open in IMG/M
3300021560\|Ga0126371_12618968	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300022532\|Ga0242655_10007588	All Organisms → cellular organisms → Bacteria	1960	Open in IMG/M
3300022717\|Ga0242661_1110909	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	583	Open in IMG/M
3300025898\|Ga0207692_10818599	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	610	Open in IMG/M
3300025906\|Ga0207699_10295283	All Organisms → cellular organisms → Bacteria	1130	Open in IMG/M
3300025922\|Ga0207646_11213716	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	661	Open in IMG/M
3300025929\|Ga0207664_10510079	All Organisms → cellular organisms → Bacteria	1077	Open in IMG/M
3300027069\|Ga0208859_1036946	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300027109\|Ga0208603_1063366	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300027172\|Ga0208098_1026448	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	590	Open in IMG/M
3300027727\|Ga0209328_10174833	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	651	Open in IMG/M
3300027783\|Ga0209448_10057730	All Organisms → cellular organisms → Bacteria	1305	Open in IMG/M
3300027842\|Ga0209580_10406053	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	679	Open in IMG/M
3300027874\|Ga0209465_10272124	All Organisms → cellular organisms → Bacteria	848	Open in IMG/M
3300027884\|Ga0209275_10074165	All Organisms → cellular organisms → Bacteria	1691	Open in IMG/M
3300031122\|Ga0170822_15358259	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	500	Open in IMG/M
3300031543\|Ga0318516_10085615	All Organisms → cellular organisms → Bacteria	1764	Open in IMG/M
3300031543\|Ga0318516_10416422	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	773	Open in IMG/M
3300031544\|Ga0318534_10489708	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	703	Open in IMG/M
3300031545\|Ga0318541_10037757	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2432	Open in IMG/M
3300031546\|Ga0318538_10333557	All Organisms → cellular organisms → Bacteria	818	Open in IMG/M
3300031561\|Ga0318528_10397971	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	739	Open in IMG/M
3300031564\|Ga0318573_10024132	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2774	Open in IMG/M
3300031572\|Ga0318515_10546001	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	618	Open in IMG/M
3300031679\|Ga0318561_10074262	All Organisms → cellular organisms → Bacteria	1748	Open in IMG/M
3300031679\|Ga0318561_10259844	All Organisms → cellular organisms → Bacteria	947	Open in IMG/M
3300031681\|Ga0318572_10696059	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	605	Open in IMG/M
3300031682\|Ga0318560_10315073	All Organisms → cellular organisms → Bacteria	843	Open in IMG/M
3300031713\|Ga0318496_10085438	All Organisms → cellular organisms → Bacteria	1679	Open in IMG/M
3300031719\|Ga0306917_10934143	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	678	Open in IMG/M
3300031724\|Ga0318500_10374523	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	705	Open in IMG/M
3300031736\|Ga0318501_10330649	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300031744\|Ga0306918_11236122	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300031748\|Ga0318492_10566110	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300031751\|Ga0318494_10338266	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	870	Open in IMG/M
3300031765\|Ga0318554_10091975	All Organisms → cellular organisms → Bacteria	1700	Open in IMG/M
3300031770\|Ga0318521_10562738	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	688	Open in IMG/M
3300031777\|Ga0318543_10168909	All Organisms → cellular organisms → Bacteria	965	Open in IMG/M
3300031779\|Ga0318566_10054006	All Organisms → cellular organisms → Bacteria	1915	Open in IMG/M
3300031779\|Ga0318566_10355748	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	722	Open in IMG/M
3300031779\|Ga0318566_10498339	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300031782\|Ga0318552_10482125	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	633	Open in IMG/M
3300031792\|Ga0318529_10545692	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	538	Open in IMG/M
3300031796\|Ga0318576_10198392	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	943	Open in IMG/M
3300031798\|Ga0318523_10078452	All Organisms → cellular organisms → Bacteria	1596	Open in IMG/M
3300031821\|Ga0318567_10125773	All Organisms → cellular organisms → Bacteria	1405	Open in IMG/M
3300031831\|Ga0318564_10478991	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300031833\|Ga0310917_10623732	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	732	Open in IMG/M
3300031859\|Ga0318527_10246840	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	759	Open in IMG/M
3300031880\|Ga0318544_10139939	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	925	Open in IMG/M
3300031893\|Ga0318536_10053923	All Organisms → cellular organisms → Bacteria	1949	Open in IMG/M
3300031893\|Ga0318536_10090802	All Organisms → cellular organisms → Bacteria	1522	Open in IMG/M
3300031896\|Ga0318551_10650623	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	609	Open in IMG/M
3300031910\|Ga0306923_10873332	All Organisms → cellular organisms → Bacteria	987	Open in IMG/M
3300031910\|Ga0306923_11725262	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	646	Open in IMG/M
3300031910\|Ga0306923_12530052	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	505	Open in IMG/M
3300031912\|Ga0306921_10335631	All Organisms → cellular organisms → Bacteria	1768	Open in IMG/M
3300031912\|Ga0306921_12028850	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	612	Open in IMG/M
3300031945\|Ga0310913_11231649	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	520	Open in IMG/M
3300031946\|Ga0310910_10588103	All Organisms → cellular organisms → Bacteria	883	Open in IMG/M
3300031954\|Ga0306926_10194228	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2519	Open in IMG/M
3300031959\|Ga0318530_10439481	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	541	Open in IMG/M
3300031981\|Ga0318531_10519756	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	539	Open in IMG/M
3300032001\|Ga0306922_10276863	All Organisms → cellular organisms → Bacteria	1803	Open in IMG/M
3300032008\|Ga0318562_10356777	All Organisms → cellular organisms → Bacteria	850	Open in IMG/M
3300032043\|Ga0318556_10221489	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	986	Open in IMG/M
3300032052\|Ga0318506_10309396	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	701	Open in IMG/M
3300032054\|Ga0318570_10502419	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	553	Open in IMG/M
3300032055\|Ga0318575_10047983	All Organisms → cellular organisms → Bacteria	1948	Open in IMG/M
3300032059\|Ga0318533_11168647	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300032063\|Ga0318504_10190676	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	955	Open in IMG/M
3300032063\|Ga0318504_10522591	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	569	Open in IMG/M
3300032076\|Ga0306924_10862863	All Organisms → cellular organisms → Bacteria	1004	Open in IMG/M
3300032090\|Ga0318518_10546458	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300032094\|Ga0318540_10591998	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	534	Open in IMG/M
3300032180\|Ga0307471_100404283	All Organisms → cellular organisms → Bacteria	1494	Open in IMG/M
3300032180\|Ga0307471_103842178	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	531	Open in IMG/M
3300032261\|Ga0306920_100168645	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3263	Open in IMG/M
3300033289\|Ga0310914_10667758	All Organisms → cellular organisms → Bacteria	934	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.01%
Host-Associated	Host-Associated	2.99%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.27%
Plants	Host-Associated → Plants	2.99%
Aquatic	Environmental → Aquatic	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.27%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.24%
Freshwater	Environmental → Aquatic → Freshwater	0.75%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	82.09%
Loam	Environmental → Terrestrial → Soil → Loam	11.94%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.24%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.49%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.75%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.75%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	64.93%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.18%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.46%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.73%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.99%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.24%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.49%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.75%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	44.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.91%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.97%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.48%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.48%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.24%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.24%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	1.49%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.49%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.49%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.49%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.49%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.75%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.75%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.75%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.75%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.75%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.75%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021439	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R03	Environmental	Open in IMG/M
3300021444	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022717	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300027069	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF002 (SPAdes)	Environmental	Open in IMG/M
3300027109	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF008 (SPAdes)	Environmental	Open in IMG/M
3300027172	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF038 (SPAdes)	Environmental	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066395_109488011	3300004633	Tropical Forest Soil	RVFETGDPAVLMVLEKAGAERLEYGIERDEGLVEDLKLFARAKELL*
Ga0066673_102743491	3300005175	Soil	LRVFETDDPAVLMVLEKAGTNRSDYAIERDQGLVADLRLYARAFEPS*
Ga0066682_109784751	3300005450	Soil	NLRVFETDDPAVLMVLEKAGTSRSEYAIERDEGLVADLRLYARALQPS*
Ga0070706_1009490131	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VFETDDPAVLMVLEKAGTSRSDYAIERDEGLVADLRLFARALEPS*
Ga0070730_106234572	3300005537	Surface Soil	FEGSDELTLMVLEKSPAGRSEYGIERDEGLVADLKLYARALELS*
Ga0066661_103502831	3300005554	Soil	NLRVFETDDPAALMVLEKAGTSRSDYAIERDEGLVADLRLYARALAPS*
Ga0066704_109430891	3300005557	Soil	LRVFETDDPAALMVLERAGTSRSDYAIERDEGLVADLRLYARALAPS*
Ga0066903_1029264491	3300005764	Tropical Forest Soil	ADGRNLRVFETDDPAVLMVLEKAVEGRSEYGIERDEGLVADLRLYARALELS*
Ga0075434_1021154653	3300006871	Populus Rhizosphere	ELDFGGRNLRVFETSDPAVLMVLEKGEAGRSDYGIERDEGLVADLQLFARASQTA*
Ga0075424_1014914991	3300006904	Populus Rhizosphere	AELDFGGRNLRVFETGDPAVLMVLEKSEAGRSDYGIERDEGLLADLQLFARASQMA*
Ga0099792_111115601	3300009143	Vadose Zone Soil	IKAKLAELEFDGRNLRVFETADPAVLMVLEKAASERSEYGIERDEGLVADLRLFARVKEQK*
Ga0116217_105693441	3300009700	Peatlands Soil	IFETANPTILMVLDKREDKRSEYGIERDEGLVADLKLFARSGL*
Ga0126373_125373031	3300010048	Tropical Forest Soil	AEVDVDSRNLRVFETGDPAVLMVLEKADAERHEYGIERDEGLVSDLRLFARARELT*
Ga0074046_105975702	3300010339	Bog Forest Soil	RNLRVFETSDSAVLMVLEKAGTERSEYAIERDEGLVADLRLFARSLELS*
Ga0126378_125427782	3300010361	Tropical Forest Soil	IKAKLAELEAGERHLRVFDTADPAVLTVLEKCARERSEYGIERDLGLVADLALFARARALS*
Ga0126381_1029400522	3300010376	Tropical Forest Soil	LDTPERNLRVFETDDPAVLMVLEKARTGRGEYAIERDEGLVADLRLYTRAFELASRETP*
Ga0126383_100929564	3300010398	Tropical Forest Soil	AELDTPERNLRVFETEDPAVLMVLEKAETGRGEYGIERDEGLVADLSLYARALELA*
Ga0150983_102583152	3300011120	Forest Soil	FETDDPAVLMVLEKTGTSRSDYGIERDEGLVADLRLYARALELS*
Ga0150983_134741071	3300011120	Forest Soil	KLAELDTAERNLRVFETDDPAVLMVLEKTRTGRDEYGIERDEGLVADLRLYARALELA*
Ga0137399_101716413	3300012203	Vadose Zone Soil	GGRNLRVFETSDPAVLMVLEKAEAARCDYGIERDEGLVADLRLFARATEPS*
Ga0137381_114339841	3300012207	Vadose Zone Soil	VFETSDSAVLVVLEKAQTSRSEYAIERDEGLVADLRLFARSLDLS*
Ga0150985_1224340734	3300012212	Avena Fatua Rhizosphere	LAELEVDGRNLRVFETADPAVLMVLEKVESERSEYGIERDEGLVADLRLFTRVKELK*
Ga0137360_102810221	3300012361	Vadose Zone Soil	ETDDPSSLTVLEKVGTSRSDYAIERDEGLVAGLRLYARALAPS*
Ga0137359_116229402	3300012923	Vadose Zone Soil	AELAADGRNLRVFETDDPAALMVLEKAGTSRSDYAIERDAGLVADLRLYARALAPS*
Ga0126369_124979192	3300012971	Tropical Forest Soil	VFETDDPAVLMVLEKAGTSRSEYGIERDEGLVADLKLYARALELA*
Ga0137418_103812571	3300015241	Vadose Zone Soil	ASDGRSLRVFETDDPAALMVLEKAGTNRSDYAIERDEGLVADLTLYARALAPS*
Ga0132256_1023632461	3300015372	Arabidopsis Rhizosphere	LAELEANGCNLRVFETGDPAVLMVLEKTETERREYGIERDEGLVADLKLFARAREVL*
Ga0182033_104413142	3300016319	Soil	FETADAAVLMVLEKAESERSEYGIERDEGLVADLRLFARAKELK
Ga0182033_120170392	3300016319	Soil	ELDCDGRNLRVFETDDPAVLMILEKAAAGRSEYGVERDDGLVADLKLFARAAQLS
Ga0182033_120255061	3300016319	Soil	TAERNLRVFETEDPAVLMVLENARTDRGEYGIERDEGLVADLRLYARALEIL
Ga0182035_112706113	3300016341	Soil	DTADPAVLTVLEKSATDRSQYGIERDPGLVADLLLYARARALS
Ga0182040_105495151	3300016387	Soil	SNGRNLRVFETDDPAVLMVLEKAGTERREYGIERDEGLVADLKLFARGRELL
Ga0182040_117987632	3300016387	Soil	ERNLRVFETEDPAVLMVLEKAETGRGEYGIERDEGLVADLSLYARALELT
Ga0182040_118843942	3300016387	Soil	FETDDPAVLMVLEKAGTERGEYGIERDEGLVADLRLYARALELL
Ga0182037_118916333	3300016404	Soil	IKAKLAELEAGERQLRVFDTADPAVLTVFEKSDGERREYGIERDPGLVADLALFARACAFSEAGL
Ga0182039_119760461	3300016422	Soil	RNLRVFETDDPAVLMVLEKAGTGRGEYGIERDEGLVADLRLYARALELL
Ga0182039_120449691	3300016422	Soil	IKAKLAELEAGERHLRVFDTADPAVLMVLEKSAGERSEYGIERDPGLVADLALFVRARIS
Ga0182038_101366531	3300016445	Soil	RVFETADPSVLVVLEKAEGARSEYGVERDDGLVADLQLFARAAGLS
Ga0182038_110674472	3300016445	Soil	RVFETDDPAVLTVLEKSRTSRSEYGIERDEGLVADLKLFARALELS
Ga0182038_120807422	3300016445	Soil	ERNLRVFETEDPAVLMVLEKAGTSRSDYGIERDEGLVADLTLYARVLELS
Ga0187783_107538962	3300017970	Tropical Peatland	VFESADPRRLVVLEKNRTARSDYAIERDEGLVADLKLFAKSRL
Ga0187782_116728411	3300017975	Tropical Peatland	ELKAGERHLRVFETADAAVLTVFEKSAAGRSQYGIERDPGLVADLALFARALAFS
Ga0066655_110834563	3300018431	Grasslands Soil	ETADPGVLRVLEKTETGRSEYGIERDEGLVADLRLFARAEEPR
Ga0210400_108360431	3300021170	Soil	LDFGGRNLRVFETSDPAVLMVLEKAEAGRSDYGIERDEGLVADLRLFARATAPS
Ga0210408_111715781	3300021178	Soil	RNLRVFETDDPAVLMVLEKAGTGRSEYGIERDAGLVVDLRLYARVLELS
Ga0210393_100721301	3300021401	Soil	ELEFDGRNLRVFETADPAVLMVLEKAETERSEYGIERDEGLVADLRLFARAKGLK
Ga0210389_102227653	3300021404	Soil	AKLAELEFDGRNLRVFETADPAVLMVLEKAASERSEYGIERDEGLVADLRLFARVKEQK
Ga0213879_101575942	3300021439	Bulk Soil	IAELDWAGRNLRVFETDDAAVLMVLEKAGTSRSEYGIERDEGLVTDLRLFARALELS
Ga0213878_103932511	3300021444	Bulk Soil	ETDDAAVLMVLEKAGTSRSEYGIERDEGLVTDLRLFARALELS
Ga0210390_112414001	3300021474	Soil	ETDDPAVLMVLEKASTGRGEYAIERDEGLVADLALLARAMELTA
Ga0210402_112741821	3300021478	Soil	AEFAADGRNLRVFETDDPAVLMVLEKTGTSRSDYGIERDEGLVADLRLYARALELS
Ga0126371_103871563	3300021560	Tropical Forest Soil	ERNLRVFETEDPAVLMVLEKAETGRGEYGIERDEGLVADLSLYARALELA
Ga0126371_108530001	3300021560	Tropical Forest Soil	NLRVFKTSDPAVLMVLEKTEDGRSEYGIEKDEGLVADLRLFARAFELS
Ga0126371_126189681	3300021560	Tropical Forest Soil	SRNLRVFETGDPAVLMVLEKADAERHEYGIERDEGLVSDLRLFARARELT
Ga0242655_100075881	3300022532	Soil	RNLRVFETADAAVLTVLEKAESERSEYGIERDEGLVADLRLFARAKELK
Ga0242661_11109091	3300022717	Soil	AKLAELGVNGRNLRVFETADPAVLMVLEKAERERSEYGIEHDEGLVADLRLFARAKELK
Ga0207692_108185992	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	SGRNLRVFETADPAVLMVLEKAEAERSDYGIERDDGLVTDLKLYARGRALL
Ga0207699_102952832	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	ELESGSRNLRVFETGDPAVLMVLEKAEAERSEYGIERDEGLVADLRLFARARELL
Ga0207646_112137162	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	LASDGRNLRVFETDDPAALMVLEKAGTSRSDYAIERDEGLVADLRLFARALEPS
Ga0207664_105100791	3300025929	Agricultural Soil	LESGSRNLRVFETGDPAVLMVLEKAEAERSEYGIERDEGLVADLRLFARARELL
Ga0208859_10369462	3300027069	Forest Soil	GRNLRVFETADPAVLMVLEKAETERSEYGIERDEGLVADLRLFARAKELK
Ga0208603_10633661	3300027109	Forest Soil	ETADPAVLTVLEKAESERSEYGIERDEGLVADLRLFARAKELK
Ga0208098_10264482	3300027172	Forest Soil	VFETADPAVLMVLEKAEAERSEYGIERDEGLVADLRLFARGKELK
Ga0209328_101748332	3300027727	Forest Soil	RSLRVFETDDPAALMVLEKAGTSRSDYAIERDEGLVVDLRLYARALEPS
Ga0209448_100577302	3300027783	Bog Forest Soil	RNLRVFETADPAVLMVLEKAESERSEYGIERDEGLVADLRLFARAKELP
Ga0209580_104060532	3300027842	Surface Soil	KVGERHLRIFETSDPNVLAVIEKSEAGRSQYAIERDDGLVAELRLFAEASRA
Ga0209465_102721242	3300027874	Tropical Forest Soil	RVFETGDPAVLMVLEKAGAERLEYGIERDEGLVEDLKLFARAKELL
Ga0209275_100741653	3300027884	Soil	LDKRNLRVFETADPAVLMVLEKAEAERSEYGIERDEGLVADLRLYARGKELK
Ga0170822_153582591	3300031122	Forest Soil	TAKRNLRIFETDDPAVLVVLEKAGTDRGEYGIEHDEGLVADLRLYARALELA
Ga0318516_100856154	3300031543	Soil	VFETDDPAVLMVLEKAGTSRGEYGIERDEGLVADLRLYARVLELS
Ga0318516_104164221	3300031543	Soil	KLAELELEGRNLRVFETSDPAVLMVLEKAETGRNEYGIERDEGLVADLKLFTRAIELS
Ga0318534_104897082	3300031544	Soil	AEIDESGRNLRVFETADPSVLVVLEKAEGARSEYGIERDEGLVADLQLFTRAAGLS
Ga0318541_100377574	3300031545	Soil	LAELAVAERNLRVFETDDPAVLMVLEKAGTDRGEYGIERDEGLVADLRLYARALELL
Ga0318538_103335571	3300031546	Soil	VFDTGDPAVLMVLEKGETGRSEYGIERDAGLVADLQLFARASQPV
Ga0318528_103979712	3300031561	Soil	VELATAERNLRVFETDDPAVLMVLEKAGSDRGEYAIERDDGLVADLRLYARALELS
Ga0318573_100241321	3300031564	Soil	KAKLAELDTAERNLRVFETDDPAVLMVLEKAGTSRSDYGIERDEGLVADLTLYARVLELS
Ga0318515_105460012	3300031572	Soil	RVFETADPSVLVVLEKAEGARSEYGIERDEGLVADLQLFTRAAGLS
Ga0318561_100742621	3300031679	Soil	RNLRVFETDDPVVLMVLEKAGPSRGEYAIERDDGLVADLRLYARALEVS
Ga0318561_102598441	3300031679	Soil	FETDDPAVLVVLEKAGTGRGEYGIERDEGLVADLRLYARALELV
Ga0318572_106960591	3300031681	Soil	LEAGERHLRVFDTADPAVLMVLEKSAGERSEYGIERDPGLVADLALFVRARASA
Ga0318560_103150732	3300031682	Soil	RNLRLFETDDPAVLVVLEKAGTGRGEYGIERDEGLVADLRLYARALELV
Ga0318496_100854383	3300031713	Soil	AELATSERNLRVFETDDPVVLMVLEKAGPSRGEYAIERDDGLVADLRLYARALEVS
Ga0306917_109341431	3300031719	Soil	LDKRNLRVFETADAAVLMVLEKAESERSEYGIERDEGLVADLRLFARAKELK
Ga0318500_103745231	3300031724	Soil	RNLRVFETDDPAVLMVLEKAGTDRGEYGIERDEGLVADLRLYARALELL
Ga0318501_103306492	3300031736	Soil	NLRIFETADAAVLMVLEKAESERSEYGIERDEGLVADLRLFARAKELK
Ga0306918_112361222	3300031744	Soil	LATAERNLRVFETDDPAVLMVLEKAGTGRGEYGIERDEGLVADLRLYARALELL
Ga0318492_105661101	3300031748	Soil	ATSERNLRVFETDDPVVLMVLEKAGPSRGEYAIERDDGLVADLRLYARALEVS
Ga0318494_103382661	3300031751	Soil	AKLAEVDVDSRNLRVFETGDPAALMVLEKADAERHEYGIERDEGLVSDLRLFARARELT
Ga0318554_100919753	3300031765	Soil	AERNLRVFETDDPAVLMVLEKAGSDRGEYAIERDDGLVADLRLYARALELS
Ga0318521_105627381	3300031770	Soil	LRVFETDDPAVLTVLEKSRTSRSEYGIERDEGLVADLKLFARALELS
Ga0318543_101689091	3300031777	Soil	KLAELDTAERNLRVFETDDPAVLMVLEKAGTSRSDYGIERDEGLVADLTLYARVLELS
Ga0318566_100540064	3300031779	Soil	LRVFETEDPAVLMVLEKAGTSRSEYGIERDEGLVADLRLYARVLELS
Ga0318566_103557482	3300031779	Soil	NLRVFETSDPAVLMVLEKAETGRNEYGIERDEGLVADLKLFTRAIELS
Ga0318566_104983392	3300031779	Soil	DGRNLRIFETADPAVLMVLEKAERERSEYGIERDEGLVADLKLFARAGELS
Ga0318552_104821251	3300031782	Soil	ETDDPAVLMVLEKAGTGRGEYGIERDEGLVADLRLYARALELL
Ga0318529_105456922	3300031792	Soil	KLAELDESGRNLRVFETADPLVLVVLEKAEGARSEYGIERDEGLVADLQLFTRAAGLS
Ga0318576_101983921	3300031796	Soil	VDSRNLRVFETGDPAALMVLEKADAERHEYGIERDEGLVSDLRLFARARELT
Ga0318523_100784523	3300031798	Soil	SVLVVLEKAEGARSEYGIERDEGLVADLQLFTRAAGLS
Ga0318567_101257731	3300031821	Soil	TDDPAVLVVLEKAGTGRGEYGIERDEGLVADLRLYARALELA
Ga0318564_104789912	3300031831	Soil	TAERNLRVFETEDPAVLMVLEKAGTSRSEYGIERDEGLVADLRLYARVLELS
Ga0310917_106237322	3300031833	Soil	DKRNLRVFETADAAVLMVLEKAESERSEYGIERDEGLVADLRLFARAKELK
Ga0318527_102468402	3300031859	Soil	IKAKLAELAAAERNLRVFETDDPAVLMVLEKAGTERGEYGIERDEGLVADLRLYGRALEL
Ga0318544_101399391	3300031880	Soil	FETGDPAALMVLEKADAERHEYGIERDEGLVSDLRLFARARELT
Ga0318536_100539231	3300031893	Soil	SDPAVLMVLEKAETGRNEYGIERDEGLVADLKLFTRAIELSSEEA
Ga0318536_100908021	3300031893	Soil	RLFETDDPAVLVVLEKAGTGRGEYGIERDEGLVADLRLYARALELV
Ga0318551_106506232	3300031896	Soil	AERNLRVFETDDPAVLTVLEKSRTSRSEYGIERDEGLVADLKLFARALELS
Ga0306923_108733322	3300031910	Soil	LDFAGRNLRVFDTDDPAVLMVLEKAETGRSEYGIERDAGLVADLQLFARASQPV
Ga0306923_117252622	3300031910	Soil	LAELELDKRNLRVFETADPAVLMVLEKAEAERSEYGVERDEGLVADLRLFARGKELK
Ga0306923_125300522	3300031910	Soil	ELATAERNLRLFETDDPAVLVVLEKAGTGRGEYGIERDEGLVADLRLYARALELA
Ga0306921_103356314	3300031912	Soil	LRLFETDDPAVLVVLEKAGTGRGEYGIERDEGLVADLRLYARALELV
Ga0306921_120288501	3300031912	Soil	SAERNLRVFETDDPAVLTVLEKSRTSRSEYGIERDEGLVADLKLFARALELS
Ga0310912_104799572	3300031941	Soil	TDDPAVLMVLEKAGTDRGEYGIERDEGLVADLRLYARALELL
Ga0310913_112316491	3300031945	Soil	ELATAERNLRVFETDDPAVLMVLEKAGTGRGEYGIERDEGLVADLRLYARALELL
Ga0310910_105881032	3300031946	Soil	KLAELELDKRNLRVFETADAAVLMVLEKAESERSEYGIERDEGLVADLRLFARAKELK
Ga0306926_101942284	3300031954	Soil	RVFETSDPAVLMVLEKTETGRNEYGIERDEGLVADLKLFTRAIELSSEEA
Ga0318530_104394812	3300031959	Soil	RNLRLFETDDPAVLVVLEKAGTGRGEYGIERDEGLVADLRLYARALELA
Ga0318531_105197561	3300031981	Soil	IKAKLAELGSAERNLRVFETDDPAVLTVLEKSRTGRSEYGIERDEGLVADLKLFARALEL
Ga0306922_102768633	3300032001	Soil	GRNLRVFDTDDPAVLMVLEKAETGRSEYGIERDAGLVADLQLFARASQPV
Ga0318562_103567771	3300032008	Soil	AELDTAERNLRIFETDDPAVLIVLEKAGTGRQEYGIERDEGLVADLRLYARVLELS
Ga0318556_102214892	3300032043	Soil	RNLRVFETADPSVLVVLEKAEGARSEYGIERDEGLVADLQLFTRAAGLS
Ga0318506_103093961	3300032052	Soil	VDVDSRNLRVFETGDPAALMVLEKADAERHEYGIERDEGLVSDLRLFARARELT
Ga0318570_105024191	3300032054	Soil	TKLAELTTAERNLRVFETDDPAVLMVLEKAGSDRGEYAIERDDGLVADLRLYARALELS
Ga0318575_100479834	3300032055	Soil	TKLAELATAERNLRVFETDDPAVLMVLEKAGSDRGEYAIERDDGLVADLRLYARALELS
Ga0318575_101097032	3300032055	Soil	TDDPAVLVVLEKAGTGRGEYGIERDEGLVADLRLYARALELV
Ga0318533_111686471	3300032059	Soil	LRLFETDDPAVLVVLEKAGTGRGEYGIERDEGLVADLRLYARALELA
Ga0318504_101906761	3300032063	Soil	DTRNLRVFETADPAVLMVLEKAEAERSEYGVERDEGLVADLRLFARGKELK
Ga0318504_105225911	3300032063	Soil	ATAERNLRVFETDDPAVLMVLEKAGLDRGEYAIERDDGLVVDLRLYARALELS
Ga0306924_108628632	3300032076	Soil	LAAAERNLRVFETDDPAVLMVLEKARTDRGEYGIERDEGLVGDLRLYARALELL
Ga0318518_105464582	3300032090	Soil	LAELDTPERNLRVFETEDPAVLMVLEKARTGRGEYAIERDEGLVADLRLYTRAFELASRETP
Ga0318540_105919981	3300032094	Soil	FETDDPAVLMVLEKAGTDRGEYGIERDEGLVADLRLYARALELL
Ga0307471_1004042833	3300032180	Hardwood Forest Soil	RVFETGDPAVLMVLEKADAERSEYGIERDEGLVADLRLFARARELL
Ga0307471_1038421782	3300032180	Hardwood Forest Soil	KLAELASDGRSLRVFETDDPAVLMVLEKAGTSRSDYAIERDAGLVADLRLYARALAPS
Ga0306920_1001686451	3300032261	Soil	VFDTDDPAVLMVLEKAETGRSEYGIERDAGLVADLQLFARASQPV
Ga0310914_106677581	3300033289	Soil	ERNLRVFETEDPAVLMVLEKARTGRGEYAIERDEGLVADLRLYTRAFELALRETP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F058757

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences