NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F058832

Metagenome / Metatranscriptome Family F058832

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F058832
Family Type Metagenome / Metatranscriptome
Number of Sequences 134
Average Sequence Length 44 residues
Representative Sequence VRRPLPRLHAITDERIARRADLDDVARDLAAGGGANLAFHARG
Number of Associated Samples 104
Number of Associated Scaffolds 134

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 39.39 %
% of genes near scaffold ends (potentially truncated) 97.76 %
% of genes from short scaffolds (< 2000 bps) 82.84 %
Associated GOLD sequencing projects 98
AlphaFold2 3D model prediction Yes
3D model pTM-score0.50

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (97.761 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(32.090 % of family members)
Environment Ontology (ENVO) Unclassified
(40.299 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(45.522 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 26.76%    β-sheet: 0.00%    Coil/Unstructured: 73.24%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.50
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 134 Family Scaffolds
PF02911Formyl_trans_C 82.09
PF01327Pep_deformylase 9.70
PF02547Queuosine_synth 2.24
PF01702TGT 2.24
PF02699YajC 1.49
PF05496RuvB_N 0.75
PF04963Sigma54_CBD 0.75
PF07499RuvA_C 0.75

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 134 Family Scaffolds
COG0223Methionyl-tRNA formyltransferaseTranslation, ribosomal structure and biogenesis [J] 82.09
COG0242Peptide deformylaseTranslation, ribosomal structure and biogenesis [J] 9.70
COG0343Queuine/archaeosine tRNA-ribosyltransferaseTranslation, ribosomal structure and biogenesis [J] 2.24
COG0809S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase)Translation, ribosomal structure and biogenesis [J] 2.24
COG1549Archaeosine tRNA-ribosyltransferase, contains uracil-DNA-glycosylase and PUA domainsTranslation, ribosomal structure and biogenesis [J] 2.24
COG1862Protein translocase subunit YajCIntracellular trafficking, secretion, and vesicular transport [U] 1.49
COG0632Holliday junction resolvasome RuvABC DNA-binding subunitReplication, recombination and repair [L] 0.75
COG1508DNA-directed RNA polymerase specialized sigma subunit, sigma54 homologTranscription [K] 0.75
COG2255Holliday junction resolvasome RuvABC, ATP-dependent DNA helicase subunit RuvBReplication, recombination and repair [L] 0.75

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms97.76 %
UnclassifiedrootN/A2.24 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002557|JGI25381J37097_1039570All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium791Open in IMG/M
3300002911|JGI25390J43892_10033063All Organisms → cellular organisms → Bacteria1247Open in IMG/M
3300002912|JGI25386J43895_10049117All Organisms → cellular organisms → Bacteria1215Open in IMG/M
3300002912|JGI25386J43895_10176766All Organisms → cellular organisms → Bacteria536Open in IMG/M
3300004019|Ga0055439_10003554All Organisms → cellular organisms → Bacteria3138Open in IMG/M
3300004463|Ga0063356_103587909All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium668Open in IMG/M
3300005174|Ga0066680_10906289All Organisms → cellular organisms → Bacteria522Open in IMG/M
3300005177|Ga0066690_10188006All Organisms → cellular organisms → Bacteria1371Open in IMG/M
3300005180|Ga0066685_10095885All Organisms → cellular organisms → Bacteria1975Open in IMG/M
3300005184|Ga0066671_10057006All Organisms → cellular organisms → Bacteria2004Open in IMG/M
3300005187|Ga0066675_11312454All Organisms → cellular organisms → Bacteria533Open in IMG/M
3300005450|Ga0066682_10130253All Organisms → cellular organisms → Bacteria1594Open in IMG/M
3300005450|Ga0066682_10596155All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium694Open in IMG/M
3300005471|Ga0070698_100997887All Organisms → cellular organisms → Bacteria784Open in IMG/M
3300005536|Ga0070697_100640366All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes936Open in IMG/M
3300005540|Ga0066697_10710750All Organisms → cellular organisms → Bacteria549Open in IMG/M
3300005545|Ga0070695_100109273All Organisms → cellular organisms → Bacteria1874Open in IMG/M
3300005552|Ga0066701_10316664All Organisms → cellular organisms → Bacteria967Open in IMG/M
3300005553|Ga0066695_10201956All Organisms → cellular organisms → Bacteria1247Open in IMG/M
3300005560|Ga0066670_10228792All Organisms → cellular organisms → Bacteria1124Open in IMG/M
3300005560|Ga0066670_10830673All Organisms → cellular organisms → Bacteria560Open in IMG/M
3300005598|Ga0066706_11204559All Organisms → cellular organisms → Bacteria575Open in IMG/M
3300005617|Ga0068859_100340092All Organisms → cellular organisms → Bacteria1595Open in IMG/M
3300005713|Ga0066905_101052799All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium720Open in IMG/M
3300006031|Ga0066651_10217029All Organisms → cellular organisms → Bacteria1014Open in IMG/M
3300006034|Ga0066656_10033182All Organisms → cellular organisms → Bacteria2886Open in IMG/M
3300006046|Ga0066652_100502262All Organisms → cellular organisms → Bacteria1127Open in IMG/M
3300006797|Ga0066659_10196275All Organisms → cellular organisms → Bacteria1474Open in IMG/M
3300006797|Ga0066659_10370537All Organisms → cellular organisms → Bacteria1117Open in IMG/M
3300006800|Ga0066660_10893692All Organisms → cellular organisms → Bacteria723Open in IMG/M
3300006800|Ga0066660_11476821All Organisms → cellular organisms → Bacteria534Open in IMG/M
3300006845|Ga0075421_100767149All Organisms → cellular organisms → Bacteria1114Open in IMG/M
3300006845|Ga0075421_101573281All Organisms → cellular organisms → Bacteria716Open in IMG/M
3300006853|Ga0075420_101772758All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium528Open in IMG/M
3300006854|Ga0075425_102231277All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium609Open in IMG/M
3300006904|Ga0075424_100020993All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis6695Open in IMG/M
3300006914|Ga0075436_101304423All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes549Open in IMG/M
3300007076|Ga0075435_100244607All Organisms → cellular organisms → Bacteria1526Open in IMG/M
3300007265|Ga0099794_10105509All Organisms → cellular organisms → Bacteria1409Open in IMG/M
3300007265|Ga0099794_10777264All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium512Open in IMG/M
3300009012|Ga0066710_102079677All Organisms → cellular organisms → Bacteria836Open in IMG/M
3300009012|Ga0066710_102888531All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium675Open in IMG/M
3300009089|Ga0099828_10168767All Organisms → cellular organisms → Bacteria1943Open in IMG/M
3300009089|Ga0099828_11001011All Organisms → cellular organisms → Bacteria745Open in IMG/M
3300009089|Ga0099828_11152228All Organisms → cellular organisms → Bacteria688Open in IMG/M
3300009090|Ga0099827_10699071All Organisms → cellular organisms → Bacteria876Open in IMG/M
3300009137|Ga0066709_104625849All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes503Open in IMG/M
3300010159|Ga0099796_10366946All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium624Open in IMG/M
3300010301|Ga0134070_10066822All Organisms → cellular organisms → Bacteria1224Open in IMG/M
3300010304|Ga0134088_10252991All Organisms → cellular organisms → Bacteria847Open in IMG/M
3300010333|Ga0134080_10021564All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae2392Open in IMG/M
3300010333|Ga0134080_10172423All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium926Open in IMG/M
3300010333|Ga0134080_10312486All Organisms → cellular organisms → Bacteria708Open in IMG/M
3300010333|Ga0134080_10583489All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes542Open in IMG/M
3300010335|Ga0134063_10067669All Organisms → cellular organisms → Bacteria1584Open in IMG/M
3300010337|Ga0134062_10003892All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas → Gemmatimonas sp.5276Open in IMG/M
3300010400|Ga0134122_12690861All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes549Open in IMG/M
3300011269|Ga0137392_10870257All Organisms → cellular organisms → Bacteria743Open in IMG/M
3300011270|Ga0137391_11345392All Organisms → cellular organisms → Bacteria561Open in IMG/M
3300011270|Ga0137391_11483088All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium523Open in IMG/M
3300012096|Ga0137389_10327339All Organisms → cellular organisms → Bacteria1300Open in IMG/M
3300012096|Ga0137389_10514652All Organisms → cellular organisms → Bacteria1027Open in IMG/M
3300012198|Ga0137364_10000879All Organisms → cellular organisms → Bacteria13250Open in IMG/M
3300012199|Ga0137383_11281553All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium523Open in IMG/M
3300012205|Ga0137362_10950067All Organisms → cellular organisms → Bacteria733Open in IMG/M
3300012206|Ga0137380_10347670All Organisms → cellular organisms → Bacteria1323Open in IMG/M
3300012206|Ga0137380_10491197All Organisms → cellular organisms → Bacteria1082Open in IMG/M
3300012210|Ga0137378_10014735All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis6802Open in IMG/M
3300012210|Ga0137378_10978693All Organisms → cellular organisms → Bacteria760Open in IMG/M
3300012211|Ga0137377_10132193All Organisms → cellular organisms → Bacteria2384Open in IMG/M
3300012211|Ga0137377_10825906All Organisms → cellular organisms → Bacteria859Open in IMG/M
3300012211|Ga0137377_11343290All Organisms → cellular organisms → Bacteria644Open in IMG/M
3300012211|Ga0137377_11945891All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium504Open in IMG/M
3300012349|Ga0137387_10459852All Organisms → cellular organisms → Bacteria923Open in IMG/M
3300012356|Ga0137371_10702565All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium773Open in IMG/M
3300012359|Ga0137385_10428576All Organisms → cellular organisms → Bacteria1125Open in IMG/M
3300012360|Ga0137375_11278028All Organisms → cellular organisms → Bacteria556Open in IMG/M
3300012532|Ga0137373_10021450All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae6447Open in IMG/M
3300012917|Ga0137395_10423565All Organisms → cellular organisms → Bacteria955Open in IMG/M
3300012917|Ga0137395_10537238All Organisms → cellular organisms → Bacteria843Open in IMG/M
3300012917|Ga0137395_10998382All Organisms → cellular organisms → Bacteria600Open in IMG/M
3300012918|Ga0137396_10038135All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae3229Open in IMG/M
3300012922|Ga0137394_10044083All Organisms → cellular organisms → Bacteria3667Open in IMG/M
3300012922|Ga0137394_10073767All Organisms → cellular organisms → Bacteria2847Open in IMG/M
3300012923|Ga0137359_10074517All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae2972Open in IMG/M
3300012925|Ga0137419_10248058All Organisms → cellular organisms → Bacteria1340Open in IMG/M
3300012929|Ga0137404_11666831All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium592Open in IMG/M
3300012930|Ga0137407_10813202All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_70_11883Open in IMG/M
3300012972|Ga0134077_10575157All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium507Open in IMG/M
3300014154|Ga0134075_10022275All Organisms → cellular organisms → Bacteria2530Open in IMG/M
3300015054|Ga0137420_1035757All Organisms → cellular organisms → Bacteria2463Open in IMG/M
3300015358|Ga0134089_10090367All Organisms → cellular organisms → Bacteria1164Open in IMG/M
3300015371|Ga0132258_10256711All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis4276Open in IMG/M
3300017657|Ga0134074_1384727All Organisms → cellular organisms → Bacteria521Open in IMG/M
3300018071|Ga0184618_10177563All Organisms → cellular organisms → Bacteria882Open in IMG/M
3300018071|Ga0184618_10177739All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium882Open in IMG/M
3300018078|Ga0184612_10448161All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_70_11642Open in IMG/M
3300018079|Ga0184627_10162823All Organisms → cellular organisms → Bacteria1182Open in IMG/M
3300018433|Ga0066667_11888169All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium544Open in IMG/M
3300019255|Ga0184643_1466260All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis4663Open in IMG/M
3300019866|Ga0193756_1016419All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1012Open in IMG/M
3300020170|Ga0179594_10427281All Organisms → cellular organisms → Bacteria503Open in IMG/M
3300021080|Ga0210382_10078610All Organisms → cellular organisms → Bacteria1347Open in IMG/M
3300021080|Ga0210382_10200217All Organisms → cellular organisms → Bacteria867Open in IMG/M
3300021344|Ga0193719_10351711All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium613Open in IMG/M
3300024187|Ga0247672_1034521All Organisms → cellular organisms → Bacteria825Open in IMG/M
3300024330|Ga0137417_1101914All Organisms → cellular organisms → Bacteria1232Open in IMG/M
3300025922|Ga0207646_11632074All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes555Open in IMG/M
3300026089|Ga0207648_12249872All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium506Open in IMG/M
3300026285|Ga0209438_1204280All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium528Open in IMG/M
3300026300|Ga0209027_1066342All Organisms → cellular organisms → Bacteria1343Open in IMG/M
3300026301|Ga0209238_1029455All Organisms → cellular organisms → Bacteria2047Open in IMG/M
3300026306|Ga0209468_1024713All Organisms → cellular organisms → Bacteria2126Open in IMG/M
3300026307|Ga0209469_1142771All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes533Open in IMG/M
3300026310|Ga0209239_1214796All Organisms → cellular organisms → Bacteria679Open in IMG/M
3300026310|Ga0209239_1216101All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium675Open in IMG/M
3300026328|Ga0209802_1071226All Organisms → cellular organisms → Bacteria1642Open in IMG/M
3300026537|Ga0209157_1147738All Organisms → cellular organisms → Bacteria1059Open in IMG/M
3300026540|Ga0209376_1310772All Organisms → cellular organisms → Bacteria613Open in IMG/M
3300026540|Ga0209376_1341481All Organisms → cellular organisms → Bacteria568Open in IMG/M
3300026547|Ga0209156_10078990All Organisms → cellular organisms → Bacteria1671Open in IMG/M
3300026547|Ga0209156_10184278All Organisms → cellular organisms → Bacteria1001Open in IMG/M
3300026547|Ga0209156_10282891All Organisms → cellular organisms → Bacteria755Open in IMG/M
3300026555|Ga0179593_1285088All Organisms → cellular organisms → Bacteria3077Open in IMG/M
3300027383|Ga0209213_1018275Not Available1304Open in IMG/M
3300028145|Ga0247663_1088249All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium558Open in IMG/M
3300028536|Ga0137415_11159294All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium587Open in IMG/M
3300028711|Ga0307293_10210459All Organisms → cellular organisms → Bacteria619Open in IMG/M
3300028819|Ga0307296_10310326All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_70_11861Open in IMG/M
3300031720|Ga0307469_11684605All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium611Open in IMG/M
3300032954|Ga0335083_10683052All Organisms → cellular organisms → Bacteria836Open in IMG/M
3300033808|Ga0314867_132007All Organisms → cellular organisms → Bacteria584Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil32.09%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil21.64%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil9.70%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil8.96%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere6.72%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment2.99%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.99%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.99%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment2.24%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.49%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands0.75%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.75%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.75%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.75%
PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland0.75%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.75%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.75%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.75%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.75%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.75%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.75%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cmEnvironmentalOpen in IMG/M
3300002911Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cmEnvironmentalOpen in IMG/M
3300002912Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cmEnvironmentalOpen in IMG/M
3300004019Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D2EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005184Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120EnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146EnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150EnvironmentalOpen in IMG/M
3300005553Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144EnvironmentalOpen in IMG/M
3300005560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119EnvironmentalOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300006031Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100EnvironmentalOpen in IMG/M
3300006034Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006853Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300010159Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3EnvironmentalOpen in IMG/M
3300010301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015EnvironmentalOpen in IMG/M
3300010304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015EnvironmentalOpen in IMG/M
3300010333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015EnvironmentalOpen in IMG/M
3300010337Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012360Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaGEnvironmentalOpen in IMG/M
3300012532Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012972Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300014154Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015EnvironmentalOpen in IMG/M
3300015054Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015358Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300017657Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015EnvironmentalOpen in IMG/M
3300018071Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1EnvironmentalOpen in IMG/M
3300018078Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coexEnvironmentalOpen in IMG/M
3300018079Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300019255Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019866Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1m1EnvironmentalOpen in IMG/M
3300020170Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300021080Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redoEnvironmentalOpen in IMG/M
3300021344Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2EnvironmentalOpen in IMG/M
3300024187Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK13EnvironmentalOpen in IMG/M
3300024330Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026285Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026300Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026306Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)EnvironmentalOpen in IMG/M
3300026307Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)EnvironmentalOpen in IMG/M
3300026310Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026328Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)EnvironmentalOpen in IMG/M
3300026537Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)EnvironmentalOpen in IMG/M
3300026540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)EnvironmentalOpen in IMG/M
3300026547Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)EnvironmentalOpen in IMG/M
3300026555Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300027383Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300028145Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK04EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300028711Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150EnvironmentalOpen in IMG/M
3300028819Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300032954Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2EnvironmentalOpen in IMG/M
3300033808Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_100_20EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI25381J37097_103957023300002557Grasslands SoilLPRLHAITDERIARRRDLDAVARALAEGGGSDFAFHARGRELT
JGI25390J43892_1003306313300002911Grasslands SoilVTRAGRGALPRLHAVTDEXIAKRPNLDDVARALVAGGGERLALHARGRGLSGL
JGI25386J43895_1004911733300002912Grasslands SoilVKPPLPRLHAITDERIARRADLADVASALATAAGGDVALHA
JGI25386J43895_1017676623300002912Grasslands SoilVRSLPALPRLHAITDERIARRPDLDTVAQQLAAGGREHLAF
Ga0055439_1000355453300004019Natural And Restored WetlandsVRPAFPKLHAVTDERIARRPDVEQISAALARGAPDLALHARGHT
Ga0063356_10358790923300004463Arabidopsis Thaliana RhizosphereVKPALPRLHAITDERIARRADLSTVARALADGGGSDLALHARGRGLSGLEHY
Ga0066680_1090628913300005174SoilMRPPLPRLHAITDERIARRPELGDVATTLAAGGGADLALHA
Ga0066690_1018800613300005177SoilVRPPLPRLHAVTDERVARRADLHVVAAELAAGAEQQLALHARGHD
Ga0066685_1009588543300005180SoilMRAGGALPRLHAITDERIARRSDIDGIATALSEGGGRELAIHARGRALTG
Ga0066671_1005700643300005184SoilVTSPLPRLHAITDERIARRPDLDSVAAALAEGGGSDLALHARGRQLTGL
Ga0066675_1131245423300005187SoilVTRAAGGALPRLHAITDDRIARRPDLDDVARALAAGGGEWLAFHA
Ga0066682_1013025313300005450SoilVKPPLPRLHAITDERIARRADLGAVARQLGAAGGDQLAFHAR
Ga0066682_1059615513300005450SoilMRPLLPRLHAITDERIARRPDLDLIAAALAQGGGSDLAFHARG
Ga0070698_10099788723300005471Corn, Switchgrass And Miscanthus RhizosphereVKALPALPRLHAVTDERIARRPDLDRVAQQLTTGGREDLAFHARGRALSGL
Ga0070697_10064036623300005536Corn, Switchgrass And Miscanthus RhizosphereMKPALPRLHAITDERIARRADLDLLLDDLAGIELAAHARGRSLSGREHY
Ga0066697_1071075013300005540SoilVKALPALPRLHAVTDERIARRPDLDRVAQQLAAGGRED
Ga0070695_10010927343300005545Corn, Switchgrass And Miscanthus RhizosphereVRTPLPRLHAITDERIARRGDLDDIARELATGGGSQLAFHARGRQL
Ga0066701_1031666413300005552SoilVKALPALPRLHAVTDERIARRPDLDRVAQQLAAGGCEDLAFHAR
Ga0066695_1020195633300005553SoilVTHAAPLPRLHAITDEPIARRSDLVEVAGQLAAGGGEDLALHARGH
Ga0066670_1022879213300005560SoilVTSPLPRLHAITDERIARRPDLDSVAAALAEGGGSDLALHARG
Ga0066670_1083067313300005560SoilVTHAAPLPRLHAITDERIARRSDLDEVAGQLAAGGGEDLALHARG
Ga0066706_1120455923300005598SoilVKPPLPRLHAITDERIARRADLGAVARQLGAAGGDQLAFHARGRALSGLEH
Ga0068859_10034009213300005617Switchgrass RhizosphereVRPPLPRLHAITDERIARRPDLEDIAAELAKGGGSQLAFHARGRELSGHEH
Ga0066905_10105279923300005713Tropical Forest SoilVRAPLPRLHAITDERTARRPDLDAVAGALADGGGSNLAFHARGRGLTGREHYD
Ga0066651_1021702913300006031SoilVRRPLPRLHAITDERIARRADLDEVARELAAGGGANLA
Ga0066656_1003318213300006034SoilVRPPLPRLHAVTDERIARRADLDDLARELATGGGADLAFH
Ga0066652_10050226223300006046SoilVNEGLPRLHAITDERIARRGDLDMTATAIAAGAPGRVAVHARGRTLSGREHFTL
Ga0066659_1019627533300006797SoilVTHAAPLPRLHAITDEPIARRADLDEIAAALASGGREHLALHARGRALS
Ga0066659_1037053713300006797SoilVTHAAPLPRLHAITDERIARRSDLDTVAAALASGG
Ga0066660_1089369213300006800SoilVTHAAPLPRLHAITDEPIARRSDLVEVAGQLAAGGGEDLALHARGHTLTG
Ga0066660_1147682113300006800SoilVTRAGRGVLPRLHAITDERIARRADLDEVARALAAGGGDPLAFHARGRTLSGLEH
Ga0075421_10076714923300006845Populus RhizosphereVRPPLPRLHAITDERIARRPDLEDVARALASAGGANLALHARGRGLSG
Ga0075421_10157328123300006845Populus RhizosphereMRPRLPRLHAITDERVARQPNLGDRARGLASAGGSNLALHARGRR
Ga0075420_10177275823300006853Populus RhizosphereVRPALPRLHAITDERVARRTDLHEVARELATAGGANLALHARG
Ga0075425_10223127713300006854Populus RhizosphereVRQPLPRLHAITDERIARRVDLDDVARELAKGGGSQLAFHARGRGLSGREHY
Ga0075424_100020993103300006904Populus RhizosphereVKALPALPRLHAVTDERIARRPDLGTVAQQLAAGGGEHLAFHARGRALSGLEHF
Ga0075424_10021236353300006904Populus RhizosphereVRRALPRLHAITDERIARRTDLAEILAALTDIPLAAHARGHL
Ga0075436_10130442313300006914Populus RhizosphereVKPTLPRLHAITDDAVARRPDLDAIARGLSAGGGEHLAFHARGHGLSGREVF
Ga0075435_10024460713300007076Populus RhizosphereVRQPLPRLHAITDERIARRADLDDVARELAKGGGSQLAFHARGRGLSGR
Ga0099794_1010550933300007265Vadose Zone SoilVRSPLPRLHAITDERIARRADLPDIARELAKGGGSELAFHARGRSLSGRE
Ga0099794_1077726423300007265Vadose Zone SoilVRQALPRLHAITDERIARRADLPDIARELAKGGGSELAFHA
Ga0066710_10207967713300009012Grasslands SoilVTHVAPLPRLHAITDERIARRADLDEITRQLAAGGAGELASHARVRG
Ga0066710_10288853113300009012Grasslands SoilLRPPLPRLHAITDERIARRADLDAVARALADGGGSDLAF
Ga0099828_1016876743300009089Vadose Zone SoilVKALPALPRLHAVTDERIARRPDLDRVAQQLTAGGREDLAF
Ga0099828_1100101113300009089Vadose Zone SoilVRPALPRLHAITDERIARRPDLAAIIDELAAGGGPELAFHA
Ga0099828_1115222813300009089Vadose Zone SoilVKSLPTLPRLHAITDERIARRPDLSIVAQQLAAGGREQLAFHARGRALSG
Ga0099827_1069907113300009090Vadose Zone SoilVKPPLPRLHAITDERIARRADLGDVATALATAAGVD
Ga0066709_10462584913300009137Grasslands SoilVTQAGRGARGALPRLHAITDERIARRPDLVDSARALATGGGERLAFHARGRA
Ga0075423_1033860813300009162Populus RhizosphereVRRALPRLHAITDERIARRVDVDDILDALAGVDMAAHARGHALSG
Ga0099796_1036694623300010159Vadose Zone SoilLHAITDERIARRPDLDLIAAALAQGGGSDPAFHARGR
Ga0134070_1006682213300010301Grasslands SoilVRSPLPRLHAITDERIARRPDLGDIARELAAGGGADLA*
Ga0134088_1025299113300010304Grasslands SoilVKRGAKTAGGTPLPRLHAITDERIARRADLDEVARELAAGGGDGLAFHARG
Ga0134080_1002156413300010333Grasslands SoilVKSLPALPRLHAITDERIARRPNLGEITRQLAAGAGPELALHARGRALSGLEHY
Ga0134080_1017242323300010333Grasslands SoilMRPPLPRLHAITDERIARRPDLDLIAAALAQGGGSDLAFHARGR
Ga0134080_1031248613300010333Grasslands SoilVTHATPLPRLHAITDERIARRADLDEIARQLAAGGGEH
Ga0134080_1058348923300010333Grasslands SoilVKALPALPRLHAVTDERIARRPDLDRVAQQLAAGGCEDLAFHARGRALSGLE
Ga0134063_1006766933300010335Grasslands SoilVKSLPALPRLHAITDERIARRPDLGEITRLLAAGAG
Ga0134062_1000389213300010337Grasslands SoilVKALPALPRLHAITDERIARRPDLGEITRLLAAGAG
Ga0134122_1269086113300010400Terrestrial SoilVRAPLPRLHAITDERIARRADLPEVARQLAAAGGANL
Ga0137392_1087025713300011269Vadose Zone SoilVKSLPTLPRLHAITDERIARRPDLSIVAQQLAAGGREQLAFH
Ga0137391_1134539223300011270Vadose Zone SoilVKPPLPRVHAVTDERVARRADLDRVAADLAAGGGAALA
Ga0137391_1148308823300011270Vadose Zone SoilVRPALPRLHAITDERIARRADLPEIARELAKGGGSQLAFHA
Ga0137389_1032733933300012096Vadose Zone SoilMRPALPRLHAITDERVARRPDLDEIAHDLAAGGGAELAFHARGH
Ga0137389_1051465213300012096Vadose Zone SoilVKSLPTLPRLHAITDERIARRPDLSMVAQQLAAGGR
Ga0137364_10000879173300012198Vadose Zone SoilVRAALPRLHAITDERIARRSDLDAVARALSDGGGSDLAIHARG
Ga0137383_1128155323300012199Vadose Zone SoilVRAALPRLHAITDERIARRSDLDAVARALSDGGGSDLAIHARGRALT
Ga0137362_1095006713300012205Vadose Zone SoilVKSVPVLPRLHAITDERIARRPDLGEVTRQLAAGAGSELALHA
Ga0137380_1034767033300012206Vadose Zone SoilVRAALPRLHAITDERIARRSDLDAVARALSDGGGSDLAIHARGRELTGLEH
Ga0137380_1049119713300012206Vadose Zone SoilVRPPLPRLHAITDERIARRADLPEVARELAAGGGAAMAF
Ga0137378_1001473513300012210Vadose Zone SoilVKPPLPRLHAITDERIARRADLGAVARQLGAAGGDQLAFHARGRTLSG
Ga0137378_1097869323300012210Vadose Zone SoilVKTLPALPRLHAVTDERIARRPDLGEITRQLVAGAGSELA
Ga0137377_1013219353300012211Vadose Zone SoilVTHAAPLPRLHAITDERIARRSDLDTVAAALASGGREQLAFHARGHTL
Ga0137377_1082590623300012211Vadose Zone SoilVRTPLPRLHAITDERIARRSDIDAIAVALAQSGGSDLAFHA
Ga0137377_1134329013300012211Vadose Zone SoilVKSLPALPRLHAITDERIARRPDLGEITRQLAAGAGSELALHAR
Ga0137377_1194589113300012211Vadose Zone SoilVRQPLPRLHAITDERIARRVDLDLIAAALAEGGGSDLAFHARG
Ga0137387_1045985223300012349Vadose Zone SoilVKSVPVLPRLHAITDERIARRPDLSTVAQQLAVGGG
Ga0137371_1070256513300012356Vadose Zone SoilLHAITDERIARRPDIDVVARALAEGGGLDLAFHARGRELTGL
Ga0137385_1042857623300012359Vadose Zone SoilVRPPLPRLHAITDERIARRPDLPDIARELAAGAGEHLAFHARG
Ga0137375_1127802823300012360Vadose Zone SoilVKALPALPRLHAVTDERIARRPDLDRVAQQLAAGGREDLAFHARGRALSGLEH
Ga0137373_1002145013300012532Vadose Zone SoilVRAALPRLHAITDERIARRSDLDAVARALSDGGGSDLAIHARGR
Ga0137395_1042356523300012917Vadose Zone SoilVKPPLPRVHAVTDERVARRADLDRVAADLAAGGGAALAFHARG
Ga0137395_1053723813300012917Vadose Zone SoilVKSLPTLPRLHAITDERIARRPDLSIVAQQLAAGGREQLAFHARGR
Ga0137395_1099838223300012917Vadose Zone SoilVKPPLPRLHAITDERIARRAALPDVARELAAGGEAAMAFHARG
Ga0137396_1003813513300012918Vadose Zone SoilVKPPLPRLHAITDERVARRADLADVASALAAGGGADLALH
Ga0137394_1004408313300012922Vadose Zone SoilLPRIHAITDERIARRGDLDSIATALAEGGGADVALHARGRALTGAEHYDLAL
Ga0137394_1007376713300012922Vadose Zone SoilLHAITDERIARRPDLDLIAAALAQGGGSELAFHAR
Ga0137359_1007451753300012923Vadose Zone SoilVKSLPTLPRLHAITDERIARRPDLSIVAQQLAAGGREQLAFHARGRALSGLEHF
Ga0137419_1024805833300012925Vadose Zone SoilVRQPLPRLHAITDERIARRADLPDIARELAKGGGSELAFHA
Ga0137404_1166683113300012929Vadose Zone SoilVRPPLPRLHAITDERIARRPDLDVIAAALAVGGGTELAFHARGHKLTG
Ga0137407_1081320213300012930Vadose Zone SoilVRPPLPRLHAVTDERIARRADLDDTARRLAEVGGANLALHARGRNLTG
Ga0134077_1057515723300012972Grasslands SoilVRPPLPRLHAVTDERIARRADLDDAARQLAEVGGANLALHA
Ga0134075_1002227553300014154Grasslands SoilVTHATPLPRLHAITDERIARRADLDEIARQLAAGGGEQLAFHARG
Ga0137420_103575713300015054Vadose Zone SoilVRAVLPRLHAITDERIARRSDFDTVASALADGGGADLAIHARGRELTGF
Ga0134089_1009036713300015358Grasslands SoilVKPPVPRLHAIIDERIARRADLGAVARQLAAAGGEELA
Ga0132258_1025671113300015371Arabidopsis RhizosphereVRPPLPRLHAITDERTARRSDLRDVARELAAGGGS
Ga0134074_138472713300017657Grasslands SoilVKALPALPRLHAVTDERIARRPDLDRVAQQLAAGG
Ga0184618_1017756323300018071Groundwater SedimentMRPPLPRLHAITDERIARRPDVDVIARALADGGGSDLAFHARGRELTG
Ga0184618_1017773923300018071Groundwater SedimentMRPALPRLHAITDERIARRPDVDVIARALADGGGSDLAFHARGRELTG
Ga0184612_1044816123300018078Groundwater SedimentVRPPLPRLHAITDERIARRADLHEVARELARSGGANLALH
Ga0184627_1016282313300018079Groundwater SedimentVKPPLPRLHAVTDERIARRADLDLIVRQLATAGPALT
Ga0066667_1188816913300018433Grasslands SoilVRAALPRLHAITDERIARRSDLDAVARALSDGGGSDLAIHA
Ga0184643_146626073300019255Groundwater SedimentVRPALPRLHAITDERIARRGDLDEVARELAIAGGANLALHARG
Ga0193756_101641913300019866SoilVKSVPALPRLHAITDERIARRPDLGEIAQRLALGGGDRMAFHARGRALSGLE
Ga0179594_1042728113300020170Vadose Zone SoilVNEGLPRLHAITDERIARRRDLDVTATAIAAGAPGRVAVHARGRTLSGRE
Ga0210382_1007861013300021080Groundwater SedimentMRPALPRLHAITDERIARRPDVDVIARALADGGGSDLAFHARGR
Ga0210382_1020021713300021080Groundwater SedimentVKSVPALPRLHAITDERIARRPDVGEIAQRLALGGGDRM
Ga0193719_1035171113300021344SoilVRPPLPRLHAITDERIARRPDLDLIATALAMGGGTELAFHARGHTLTGLEQFE
Ga0247672_103452123300024187SoilVRPPLPRLHAITDGPIARRTDIETIARALADGGGSDLAIH
Ga0137417_110191433300024330Vadose Zone SoilVRQPLPRLHAITDERIARRADLPDIARELGKGGGSELAFHARGRSLSGREH
Ga0207646_1163207413300025922Corn, Switchgrass And Miscanthus RhizosphereVRPPLPRLHAVTDERIARRADLDDTARQLAEVGGANLALHARGRAL
Ga0207648_1224987223300026089Miscanthus RhizosphereVRPPLPRLHAITDERIARRPDLESIAAELAKGGGSQLAFH
Ga0209438_120428023300026285Grasslands SoilMRPSLPRLHAITDERIARRPDLDLIAAALAQGGGSDLAFH
Ga0209027_106634213300026300Grasslands SoilVTHAAPLPRLHAITDERIARRADLDEITRQLAAGGAA
Ga0209238_102945513300026301Grasslands SoilVRRPLPRLHAITDERIARRADLDDVARDLAAGGGANLAFHARG
Ga0209468_102471313300026306SoilMRPPLPRLHAITDERIARRPDLDLIAAALAQGGGSDLAFHAR
Ga0209469_114277113300026307SoilVKALLALPRLHAVTDERIARRPDLDRVAQQLAAGGCEDLAFHARGRALSGLEH
Ga0209239_121479613300026310Grasslands SoilVTHAAPLPRLHAITDERIARRADLDEITRQLAAGGAAELALHARGRGLSGLEHY
Ga0209239_121610113300026310Grasslands SoilVKPALARLHAITDERIARRPDLDLIATALAEGGGSDL
Ga0209802_107122633300026328SoilVRSLPALPRLHAITDERIARRPDLDTVAQQLAAGGREHLAFHARG
Ga0209157_114773813300026537SoilVRQPLPRLHAITDERIARRADLPDIARELAKGGGSELAF
Ga0209376_131077223300026540SoilVTHAAPLPRLHAITDERIARRADLDEVARQLAAGGGED
Ga0209376_134148123300026540SoilVKALPALPRLHAVTDERIARRPDLDRVAQQLAAGGCEDLAFH
Ga0209156_1007899033300026547SoilLPRLHAITDERIARRRDLDAVARALAEGGGSDFAFHARGRELTGLEHY
Ga0209156_1018427813300026547SoilVTSPLPRLHAITDERIARRPDLDSVAAALAEGGGSDLA
Ga0209156_1028289123300026547SoilLHAITDERIARRADLDDIARQLAAGGSGDLALHARGRALS
Ga0179593_128508873300026555Vadose Zone SoilVKSLPTLPRLHAITDERIARRPDLSIVAQQLAAGGREQLAFHARGRALS
Ga0209213_101827513300027383Forest SoilVTSVPTLPRLHAITDERIARRPDLERVAQQLASGGGEQLAFHARGRALSGL
Ga0247663_108824913300028145SoilVRPPLPRLHAITDERIARRPDLEDIAAELAKGGGSQLAFH
Ga0137415_1115929413300028536Vadose Zone SoilVRPPLPRLHAITDERIARRPDLDLIAAALAKGGGSDL
Ga0307293_1021045913300028711SoilVRPALPRLHAITDERIARRGDLDEVARELAIAGGANLALHTRGR
Ga0307296_1031032613300028819SoilVRAPLPRLHAITDERIARRADLDHVARALSSAGGANLALHARGRALSGAEHYD
Ga0307469_1168460513300031720Hardwood Forest SoilVNTPQPRLHAITDERIARRGDLEEIARELAKGGGSDLAFHARGRQL
Ga0335083_1068305213300032954SoilVTAARIPLPRLHAVTDERITRLPDLDDRARALGAAGAALHARGH
Ga0314867_132007_2_1723300033808PeatlandMRPMRPPLPRLHAFTDERVARGADVAGRAGALARGAGPDIALHARGRALTGLEHFTL

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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