Metagenome / Metatranscriptome Family F058849

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F058849
Family Type	Metagenome / Metatranscriptome
Number of Sequences	134
Average Sequence Length	48 residues
Representative Sequence	MRLQQQWWSVLIAAVLGGLVGVTAVAAAGEQFLPVLGVREGALRFVGIP
Number of Associated Samples	95
Number of Associated Scaffolds	134

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	97.69 %
% of genes near scaffold ends (potentially truncated)	94.78 %
% of genes from short scaffolds (< 2000 bps)	94.03 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (51.493 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (15.672 % of family members)
Environment Ontology (ENVO)	Unclassified (20.896 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (32.836 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 58.44% β-sheet: 0.00% Coil/Unstructured: 41.56%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 134 Family Scaffolds
PF02452	PemK_toxin	3.73
PF00496	SBP_bac_5	2.24
PF13458	Peripla_BP_6	2.24
PF01850	PIN	2.24
PF00672	HAMP	2.24
PF01548	DEDD_Tnp_IS110	2.24
PF01844	HNH	2.24
PF04392	ABC_sub_bind	1.49
PF01934	HepT-like	1.49
PF08241	Methyltransf_11	1.49
PF00015	MCPsignal	1.49
PF13495	Phage_int_SAM_4	1.49
PF02391	MoaE	0.75
PF04255	DUF433	0.75
PF03950	tRNA-synt_1c_C	0.75
PF08028	Acyl-CoA_dh_2	0.75
PF13592	HTH_33	0.75
PF00571	CBS	0.75
PF14104	DUF4277	0.75
PF13646	HEAT_2	0.75
PF01402	RHH_1	0.75
PF14319	Zn_Tnp_IS91	0.75
PF01609	DDE_Tnp_1	0.75
PF02371	Transposase_20	0.75
PF01909	NTP_transf_2	0.75
PF07398	MDMPI_C	0.75
PF01408	GFO_IDH_MocA	0.75
PF13005	zf-IS66	0.75
PF11829	DUF3349	0.75
PF05534	HicB	0.75
PF07690	MFS_1	0.75
PF10047	DUF2281	0.75
PF05685	Uma2	0.75

COG ID	Name	Functional Category	% Frequency in 134 Family Scaffolds
COG2337	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	Defense mechanisms [V]	3.73
COG0840	Methyl-accepting chemotaxis protein (MCP)	Signal transduction mechanisms [T]	2.99
COG3547	Transposase	Mobilome: prophages, transposons [X]	2.99
COG2361	HEPN domain protein, predicted toxin of MNT-HEPN system	Defense mechanisms [V]	1.49
COG2445	Uncharacterized HEPN domain protein YutE, UPF0331/DUF86 family	General function prediction only [R]	1.49
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	1.49
COG0008	Glutamyl- or glutaminyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.75
COG0314	Molybdopterin synthase catalytic subunit MoaE	Coenzyme transport and metabolism [H]	0.75
COG1598	Antitoxin component HicB of the HicAB toxin-antitoxin system	Defense mechanisms [V]	0.75
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.75
COG2442	Predicted antitoxin component of a toxin-antitoxin system, DUF433 family	Defense mechanisms [V]	0.75
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.75
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.75
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.75
COG4226	Predicted nuclease of the RNAse H fold, HicB family	General function prediction only [R]	0.75
COG4636	Endonuclease, Uma2 family (restriction endonuclease fold)	General function prediction only [R]	0.75
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.75
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.75
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	51.49 %
Unclassified	root	N/A	47.76 %
Polyangium	genus	Polyangium	0.75 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	51.49 %
Unclassified	root	N/A	47.76 %
Polyangium fumosum	species	Polyangium → Polyangium fumosum	0.75 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	51.49 %
Unclassified	root	N/A	47.76 %
Polyangium fumosum	species	Polyangium → Polyangium fumosum	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.76 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	14.18 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	7.46 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.49 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.49 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	1.49 %
Nitrospinae/Tectomicrobia group	clade	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group	1.49 %
Polyangium fumosum	species	Polyangium → Polyangium fumosum	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.76 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	3.73 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.24 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	2.99 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.99 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.49 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.49 %
Candidatus Tectomicrobia	phylum	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia	1.49 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1.49 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.49 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.75 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.75 %
Polyangium fumosum	species	Polyangium → Polyangium fumosum	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.76 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	3.73 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.24 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2.99 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.99 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	1.49 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	1.49 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.49 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	0.75 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.75 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.75 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.75 %
Chloroflexia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	0.75 %
Polyangium fumosum	species	Polyangium → Polyangium fumosum	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.76 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.99 %
Gemmatales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales	1.49 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.49 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	0.75 %
unclassified Cyanobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria	0.75 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → environmental samples	0.75 %
Thalassobaculaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Thalassobaculaceae	0.75 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.75 %
Alcaligenaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	0.75 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.75 %
Candidatus Entotheonella palauensis	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella palauensis	0.75 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.75 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.75 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.75 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.75 %
Polyangium fumosum	species	Polyangium → Polyangium fumosum	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.76 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.99 %
Gemmataceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	1.49 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.49 %
Advenella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Advenella	0.75 %
Oceanibaculum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Thalassobaculaceae → Oceanibaculum	0.75 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.75 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.75 %
uncultured Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → environmental samples → uncultured Chloroflexia bacterium	0.75 %
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	0.75 %
Nostocaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae	0.75 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.75 %
Comamonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Comamonas	0.75 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.75 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	0.75 %
Candidatus Entotheonella palauensis	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella palauensis	0.75 %
Polyangium fumosum	species	Polyangium → Polyangium fumosum	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.76 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.99 %
Gemmataceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	1.49 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.49 %
Oceanibaculum indicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Thalassobaculaceae → Oceanibaculum → Oceanibaculum indicum	0.75 %
Advenella kashmirensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Advenella → Advenella kashmirensis	0.75 %
Comamonas aquatica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Comamonas → Comamonas aquatica	0.75 %
Anabaena	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Anabaena	0.75 %
Archangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae	0.75 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	0.75 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.75 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.75 %
uncultured Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → environmental samples → uncultured Chloroflexia bacterium	0.75 %
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	0.75 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.75 %
Candidatus Entotheonella palauensis	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella palauensis	0.75 %
Polyangium fumosum	species	Polyangium → Polyangium fumosum	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.76 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.99 %
Gemmataceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	1.49 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.49 %
Pseudonocardia kunmingensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia kunmingensis	0.75 %
unclassified Anabaena	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Anabaena → unclassified Anabaena	0.75 %
Cystobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Cystobacter	0.75 %
Oceanibaculum indicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Thalassobaculaceae → Oceanibaculum → Oceanibaculum indicum	0.75 %
Advenella kashmirensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Advenella → Advenella kashmirensis	0.75 %
Comamonas aquatica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Comamonas → Comamonas aquatica	0.75 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.75 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.75 %
uncultured Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → environmental samples → uncultured Chloroflexia bacterium	0.75 %
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	0.75 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.75 %
Candidatus Entotheonella palauensis	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella palauensis	0.75 %
Polyangium fumosum	species	Polyangium → Polyangium fumosum	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.76 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.99 %
Gemmataceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	1.49 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.49 %
Cystobacter gracilis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Cystobacter → Cystobacter gracilis	0.75 %
Anabaena sp. 90	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Anabaena → unclassified Anabaena → Anabaena sp. 90	0.75 %
Pseudonocardia kunmingensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia kunmingensis	0.75 %
Oceanibaculum indicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Thalassobaculaceae → Oceanibaculum → Oceanibaculum indicum	0.75 %
Advenella kashmirensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Advenella → Advenella kashmirensis	0.75 %
Comamonas aquatica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Comamonas → Comamonas aquatica	0.75 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.75 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.75 %
uncultured Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → environmental samples → uncultured Chloroflexia bacterium	0.75 %
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	0.75 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.75 %
Candidatus Entotheonella palauensis	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella palauensis	0.75 %
Polyangium fumosum	species	Polyangium → Polyangium fumosum	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000787\|JGI11643J11755_11809218	Not Available	637	Open in IMG/M
3300003993\|Ga0055468_10155484	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300005171\|Ga0066677_10651604	Not Available	593	Open in IMG/M
3300005172\|Ga0066683_10629756	Not Available	646	Open in IMG/M
3300005332\|Ga0066388_100829276	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1513	Open in IMG/M
3300005332\|Ga0066388_102650577	Not Available	914	Open in IMG/M
3300005332\|Ga0066388_108495046	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Thalassobaculaceae → Oceanibaculum → Oceanibaculum indicum	511	Open in IMG/M
3300005336\|Ga0070680_102001472	Not Available	502	Open in IMG/M
3300005445\|Ga0070708_101010392	Not Available	780	Open in IMG/M
3300005446\|Ga0066686_10626353	All Organisms → cellular organisms → Bacteria	731	Open in IMG/M
3300005467\|Ga0070706_101692713	Not Available	576	Open in IMG/M
3300005467\|Ga0070706_102182982	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Comamonas → Comamonas aquatica	500	Open in IMG/M
3300005558\|Ga0066698_10082835	All Organisms → cellular organisms → Bacteria	2090	Open in IMG/M
3300005713\|Ga0066905_101402167	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	632	Open in IMG/M
3300005713\|Ga0066905_102231119	Not Available	511	Open in IMG/M
3300005718\|Ga0068866_11454242	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	502	Open in IMG/M
3300005764\|Ga0066903_101910875	Not Available	1137	Open in IMG/M
3300005764\|Ga0066903_102859994	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	936	Open in IMG/M
3300005764\|Ga0066903_104689617	Not Available	728	Open in IMG/M
3300005886\|Ga0075286_1073681	Not Available	503	Open in IMG/M
3300005937\|Ga0081455_10473578	All Organisms → cellular organisms → Bacteria	849	Open in IMG/M
3300006796\|Ga0066665_10138383	Not Available	1835	Open in IMG/M
3300006844\|Ga0075428_101530039	All Organisms → cellular organisms → Bacteria	698	Open in IMG/M
3300006844\|Ga0075428_101553455	All Organisms → cellular organisms → Bacteria → Proteobacteria	692	Open in IMG/M
3300006847\|Ga0075431_100368084	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	1443	Open in IMG/M
3300006852\|Ga0075433_10632296	All Organisms → cellular organisms → Bacteria	939	Open in IMG/M
3300006853\|Ga0075420_100728684	Not Available	855	Open in IMG/M
3300006880\|Ga0075429_100580853	All Organisms → cellular organisms → Bacteria	982	Open in IMG/M
3300006969\|Ga0075419_10496291	All Organisms → cellular organisms → Bacteria	848	Open in IMG/M
3300006969\|Ga0075419_11026531	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Advenella → Advenella kashmirensis	601	Open in IMG/M
3300007004\|Ga0079218_11839747	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300009012\|Ga0066710_103326266	Not Available	613	Open in IMG/M
3300009089\|Ga0099828_10766639	Not Available	865	Open in IMG/M
3300009100\|Ga0075418_11938420	Not Available	641	Open in IMG/M
3300009137\|Ga0066709_100532300	All Organisms → cellular organisms → Bacteria	1661	Open in IMG/M
3300009137\|Ga0066709_101611771	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	928	Open in IMG/M
3300009147\|Ga0114129_11171650	Not Available	959	Open in IMG/M
3300009147\|Ga0114129_12439861	Not Available	626	Open in IMG/M
3300009156\|Ga0111538_13971777	Not Available	511	Open in IMG/M
3300009162\|Ga0075423_13127892	Not Available	507	Open in IMG/M
3300009444\|Ga0114945_10063437	All Organisms → cellular organisms → Bacteria → Proteobacteria	2028	Open in IMG/M
3300009444\|Ga0114945_10089512	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1719	Open in IMG/M
3300009444\|Ga0114945_10114214	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1527	Open in IMG/M
3300009444\|Ga0114945_10271423	Not Available	995	Open in IMG/M
3300009444\|Ga0114945_10352082	All Organisms → cellular organisms → Bacteria	873	Open in IMG/M
3300009444\|Ga0114945_10446481	All Organisms → cellular organisms → Bacteria	775	Open in IMG/M
3300009444\|Ga0114945_10699015	Not Available	618	Open in IMG/M
3300009553\|Ga0105249_11900806	Not Available	668	Open in IMG/M
3300009691\|Ga0114944_1299045	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300009815\|Ga0105070_1112202	Not Available	544	Open in IMG/M
3300009840\|Ga0126313_11677035	Not Available	530	Open in IMG/M
3300010029\|Ga0105074_1046540	Not Available	762	Open in IMG/M
3300010043\|Ga0126380_10506255	All Organisms → cellular organisms → Bacteria → Terrabacteria group	928	Open in IMG/M
3300010047\|Ga0126382_11574289	Not Available	608	Open in IMG/M
3300010358\|Ga0126370_11577557	Not Available	627	Open in IMG/M
3300010359\|Ga0126376_10715628	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Cystobacter → Cystobacter gracilis	965	Open in IMG/M
3300010360\|Ga0126372_10524873	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella palauensis	1118	Open in IMG/M
3300010361\|Ga0126378_10330983	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → environmental samples → uncultured Chloroflexia bacterium	1630	Open in IMG/M
3300010362\|Ga0126377_11302942	All Organisms → cellular organisms → Bacteria	798	Open in IMG/M
3300010362\|Ga0126377_11995807	Not Available	656	Open in IMG/M
3300010362\|Ga0126377_13389481	Not Available	515	Open in IMG/M
3300010366\|Ga0126379_11185218	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	870	Open in IMG/M
3300010366\|Ga0126379_13560187	Not Available	522	Open in IMG/M
3300010391\|Ga0136847_11223929	Not Available	565	Open in IMG/M
3300010398\|Ga0126383_10242624	All Organisms → cellular organisms → Bacteria	1762	Open in IMG/M
3300010398\|Ga0126383_11390045	Not Available	792	Open in IMG/M
3300010398\|Ga0126383_12091506	Not Available	653	Open in IMG/M
3300012198\|Ga0137364_11256520	Not Available	553	Open in IMG/M
3300012199\|Ga0137383_10446635	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	947	Open in IMG/M
3300012204\|Ga0137374_10625586	All Organisms → cellular organisms → Bacteria	818	Open in IMG/M
3300012206\|Ga0137380_10527416	Polyangium → Polyangium fumosum	1038	Open in IMG/M
3300012206\|Ga0137380_11240217	Not Available	631	Open in IMG/M
3300012206\|Ga0137380_11375865	All Organisms → cellular organisms → Bacteria → Proteobacteria	591	Open in IMG/M
3300012206\|Ga0137380_11494116	Not Available	560	Open in IMG/M
3300012209\|Ga0137379_10285609	Not Available	1561	Open in IMG/M
3300012209\|Ga0137379_11328115	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300012350\|Ga0137372_10452698	All Organisms → cellular organisms → Bacteria	962	Open in IMG/M
3300012351\|Ga0137386_10854808	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300012353\|Ga0137367_10242527	Not Available	1297	Open in IMG/M
3300012358\|Ga0137368_10448038	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	839	Open in IMG/M
3300012358\|Ga0137368_10512260	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	772	Open in IMG/M
3300012358\|Ga0137368_10624234	Not Available	683	Open in IMG/M
3300012360\|Ga0137375_10543029	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia kunmingensis	980	Open in IMG/M
3300012360\|Ga0137375_11354159	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	533	Open in IMG/M
3300012532\|Ga0137373_10170243	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1820	Open in IMG/M
3300012532\|Ga0137373_10611573	Not Available	821	Open in IMG/M
3300012948\|Ga0126375_11341443	Not Available	603	Open in IMG/M
3300012971\|Ga0126369_10302688	Not Available	1601	Open in IMG/M
3300012976\|Ga0134076_10151549	All Organisms → cellular organisms → Bacteria	950	Open in IMG/M
3300013306\|Ga0163162_13015476	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	541	Open in IMG/M
3300014265\|Ga0075314_1113635	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	597	Open in IMG/M
3300016341\|Ga0182035_10841814	All Organisms → cellular organisms → Bacteria	807	Open in IMG/M
3300017997\|Ga0184610_1155579	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	752	Open in IMG/M
3300018053\|Ga0184626_10143246	All Organisms → cellular organisms → Bacteria → Acidobacteria	1016	Open in IMG/M
3300018053\|Ga0184626_10434628	Not Available	519	Open in IMG/M
3300018063\|Ga0184637_10289135	All Organisms → cellular organisms → Bacteria	994	Open in IMG/M
3300018063\|Ga0184637_10780397	All Organisms → cellular organisms → Bacteria → Terrabacteria group	511	Open in IMG/M
3300018077\|Ga0184633_10254202	Not Available	903	Open in IMG/M
3300018078\|Ga0184612_10483959	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Anabaena → unclassified Anabaena → Anabaena sp. 90	608	Open in IMG/M
3300018079\|Ga0184627_10127259	All Organisms → cellular organisms → Bacteria	1348	Open in IMG/M
3300018082\|Ga0184639_10199929	All Organisms → cellular organisms → Bacteria → Proteobacteria	1060	Open in IMG/M
3300018082\|Ga0184639_10324123	Not Available	807	Open in IMG/M
3300018468\|Ga0066662_10485574	Not Available	1119	Open in IMG/M
3300019259\|Ga0184646_1256948	Not Available	516	Open in IMG/M
3300019259\|Ga0184646_1307421	All Organisms → cellular organisms → Bacteria	1351	Open in IMG/M
3300019259\|Ga0184646_1307982	Not Available	833	Open in IMG/M
3300019458\|Ga0187892_10155600	All Organisms → cellular organisms → Bacteria	1273	Open in IMG/M
3300021073\|Ga0210378_10313919	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	588	Open in IMG/M
3300022195\|Ga0222625_1250177	Not Available	506	Open in IMG/M
3300022563\|Ga0212128_10161462	All Organisms → cellular organisms → Bacteria	1440	Open in IMG/M
3300022563\|Ga0212128_10579444	Not Available	680	Open in IMG/M
3300025149\|Ga0209827_10520405	Not Available	559	Open in IMG/M
3300025157\|Ga0209399_10003971	All Organisms → cellular organisms → Bacteria	6815	Open in IMG/M
3300025157\|Ga0209399_10244109	Not Available	712	Open in IMG/M
3300025157\|Ga0209399_10379987	Not Available	550	Open in IMG/M
3300025927\|Ga0207687_11299746	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300027873\|Ga0209814_10433539	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	579	Open in IMG/M
3300027882\|Ga0209590_10042923	All Organisms → cellular organisms → Bacteria	2474	Open in IMG/M
3300028608\|Ga0247819_11100981	Not Available	507	Open in IMG/M
3300031720\|Ga0307469_11912602	Not Available	575	Open in IMG/M
3300031820\|Ga0307473_10316807	All Organisms → cellular organisms → Bacteria	989	Open in IMG/M
3300031890\|Ga0306925_11231324	All Organisms → cellular organisms → Bacteria → Proteobacteria	748	Open in IMG/M
3300031908\|Ga0310900_10672902	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	826	Open in IMG/M
3300031942\|Ga0310916_10754323	All Organisms → cellular organisms → Bacteria → Proteobacteria	822	Open in IMG/M
3300031947\|Ga0310909_10851063	All Organisms → cellular organisms → Bacteria	751	Open in IMG/M
3300031965\|Ga0326597_10798053	All Organisms → cellular organisms → Bacteria	980	Open in IMG/M
3300032075\|Ga0310890_10416005	Not Available	1002	Open in IMG/M
3300032126\|Ga0307415_102243440	Not Available	535	Open in IMG/M
3300034178\|Ga0364934_0118445	Not Available	999	Open in IMG/M
3300034178\|Ga0364934_0389536	Not Available	527	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	85.07%
Host-Associated	Host-Associated	14.93%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	61.94%
Aquatic	Environmental → Aquatic	23.13%
Plants	Host-Associated → Plants	14.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	58.96%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.69%
Thermal Springs	Environmental → Aquatic → Thermal Springs	10.45%
Sediment	Environmental → Aquatic → Sediment	7.46%
Freshwater	Environmental → Aquatic → Freshwater	4.48%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.24%
Cave	Environmental → Terrestrial → Cave	1.49%
Floodplain	Environmental → Terrestrial → Floodplain	1.49%
Marine	Environmental → Aquatic → Marine	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	46.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.69%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	10.45%
Loam	Environmental → Terrestrial → Soil → Loam	9.70%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	7.46%
Sediment	Environmental → Aquatic → Freshwater → Sediment	3.73%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.24%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.49%
Sand	Environmental → Terrestrial → Soil → Sand	1.49%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	1.49%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.49%
Lake	Environmental → Aquatic → Freshwater → Lake	0.75%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	31.34%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.69%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	10.45%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	7.46%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.46%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.97%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.48%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	3.73%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.99%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.24%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.24%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.49%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.49%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	1.49%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.49%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.75%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.75%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.75%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.75%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	15.67%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	12.69%
Thermal Springs	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs	10.45%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	10.45%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	7.46%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.48%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	3.73%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.24%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.49%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.49%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.49%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	1.49%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.49%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	0.75%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.75%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.75%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.75%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.75%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.75%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.75%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.75%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	0.75%
Bio-Ooze	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Bio-Ooze	0.75%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.75%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300003993	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005886	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_205	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009444	Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP3	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009691	Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP2	Environmental	Open in IMG/M
3300009815	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010029	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_10_20	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014265	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailC_D2	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018079	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019259	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019458	Bio-ooze microbial communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-3 metaG	Environmental	Open in IMG/M
3300019487	White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaG	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300022195	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022563	OV2_combined assembly	Environmental	Open in IMG/M
3300025149	Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP2 (SPAdes)	Environmental	Open in IMG/M
3300025157	Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP3 (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028608	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Xylose_Day6	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300034178	Sediment microbial communities from East River floodplain, Colorado, United States - 27_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI11643J11755_118092182	3300000787	Soil	MRLQHQWWSGLVAAVLGGLVGVTAVAAAGEQFLPVLTIREGAQRFAGIAGA
Ga0055468_101554841	3300003993	Natural And Restored Wetlands	MRVQHQWWSGLVAAVLGGLVGVTAVAAADVQFLPVLSTREGALRSIQIPLANGFIDYV
Ga0066677_106516042	3300005171	Soil	MRLKHQWWSVLVAAVLSGLVGVTAVVAGEQFLPVLGVREGGQRFIFSPR
Ga0066683_106297561	3300005172	Soil	MRLQRQWWSMLVAAVLVGLVGVTAVAAAGAQFLPVLSIREGAQRSGQIPLANG
Ga0066388_1008292761	3300005332	Tropical Forest Soil	MRLQHQWWRVLLATVLGGLVGVTAVAAAGAQFLPVFSIREGAQKAFETPITHGHIAYL
Ga0066388_1026505771	3300005332	Tropical Forest Soil	VEDQEMYLQRPWWSGLVAAVLGGLVSVTAVAAGEQFIPILSM
Ga0066388_1084950461	3300005332	Tropical Forest Soil	MHLHRLWWSGLAAVVLGGLVGVTAVAAGELFLPVLSVREGALRFVQIPLTNGFIDYLT
Ga0070680_1020014721	3300005336	Corn Rhizosphere	MRVKPQWWVMLVAATLVGLGGMPAGAADEQFIPVLSTREGALRSF
Ga0070708_1010103921	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MAPRRAPTFVEEKGMHGQQQWWSVLVAAVLGGLVGVTAVAVAGAQFI
Ga0066686_106263531	3300005446	Soil	MRWQQQWCSVLMAAALGGLMGVTAMAVAGEQFIPVLSMREGANR
Ga0070706_1016927132	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MRLQRQWWSGLMAAVFLGLVGATAVAAAGAQFLPILGIREGAQRA
Ga0070706_1021829821	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MRLKHQWGSGLVAAVLGGLVGVTGMAAVEAGEQFLPVLSIREGANRTWGIPVGNGFIDYVTL
Ga0066661_104852761	3300005554	Soil	MHLQRPWWSGLVAAVLGGLVGVTLAGAAGEEFRLFGNSWAS*
Ga0066698_100828351	3300005558	Soil	MRLQRLWWSGLVAAVLVGLVGVTAVAAAGEQFIPVLAVREGAVRSLGIPITNG
Ga0066905_1014021672	3300005713	Tropical Forest Soil	WWSGLVAAVLGGLVSVTAGAAAEGEQFLALLGAREGALRFQFIPQVDAFIAYVTLLEPRFKG*
Ga0066905_1022311191	3300005713	Tropical Forest Soil	MRRQYQWWSGLVAAVLVGLVGVTVVAAGGEQFILLFSIREGAIRSLGIPASNGFI
Ga0068866_114542422	3300005718	Miscanthus Rhizosphere	MRWQQQWCGVLVAAVLIGLGSVTVVAAVGEQFLPVLSIREGALRFLGIPQANGEIAYLTLLNE
Ga0066903_1019108751	3300005764	Tropical Forest Soil	MRPKRWWWSTLVAVGLGGLVGVTAVTAAGAQFLPVLSVREGALKATGIPTADGYIAY
Ga0066903_1028599941	3300005764	Tropical Forest Soil	MHLQRQWWSVLVAAMLGGLVGVTAVAAAGAQFLPVLSIREGVLRFHEIPHANGFIDYLTLLN
Ga0066903_1046896171	3300005764	Tropical Forest Soil	MRLKQPWWSGLVAAVLLGLVNVTVVAAAGEQFLPVLSIREGALRFL
Ga0075286_10736811	3300005886	Rice Paddy Soil	MRLKQLGWRGLVAAVLGGLVSVTAVAAAGAQFLPVLGVREGALR
Ga0081455_104735783	3300005937	Tabebuia Heterophylla Rhizosphere	MRLQQQWWGGLVAAVLLGLVGVTTVAAAEQFIPVLS
Ga0066665_101383832	3300006796	Soil	MRLTHQWWSGFVATVLIGLVGVTAVAAADAQFLPVLSTREGAQRSGQIPIAN
Ga0075428_1015300393	3300006844	Populus Rhizosphere	MHLQDQWGSVFIAAILGGLVGVTAVAAAGAQFLPVLSAREGFNRAT
Ga0075428_1015534552	3300006844	Populus Rhizosphere	MRLKHQWWGMLVAAVLGGLVGVTAVAAADAQFLPVLSVREGALRFQHIPMTNGFIDYLTLLN
Ga0075431_1003680844	3300006847	Populus Rhizosphere	MHLQRQWWTVLMTTVLVGLVGVTAAVAAGEQFIPVLSMREGALK
Ga0075433_106322961	3300006852	Populus Rhizosphere	MHGQHQWWRVLVAAVLGGLVGVTAVAAAGAQFLPVLSRREGAQRFAGIPLTDGYIAY
Ga0075420_1007286842	3300006853	Populus Rhizosphere	MRGAPQWWSGLVAAVLGGLVSVTAVGAAGAQFLPVLSTREG
Ga0075429_1005808532	3300006880	Populus Rhizosphere	MRMQQQWWSGLVAAMLGGLVGVTAVAAAGAQFFPVLGIREGALK
Ga0075419_104962911	3300006969	Populus Rhizosphere	MREQHQWWSTLVAAVLGGLVGVTAVAAAGEQFLPVLSIREGALRVLGIPQADGFIAYLT
Ga0075419_110265311	3300006969	Populus Rhizosphere	MRLKHQWWSGLVAAVLGGLVGVTAVAAAGEQFLPILGVREGAFRALQIPNANGFIDY
Ga0079218_118397472	3300007004	Agricultural Soil	MRLQQQWWSVLLAAVLMGLVGVTALAAAGEQFLPVLAVREGALKSFYIPQA
Ga0066710_1033262661	3300009012	Grasslands Soil	MHLQQPWWSVLVAAVLVGLVGVTAVAAAGEQFLPILGI
Ga0099828_107666391	3300009089	Vadose Zone Soil	MHLQHSWWSVLAAAVLLGLVGVTAVAAAGAQFLPILGVREGALRFGQIPLANGFID
Ga0075418_119384201	3300009100	Populus Rhizosphere	MHLQRQWWSGLVAAVLGGLVGVTLAEAAGEQFLPVLSTREGAFRSLQ
Ga0066709_1005323004	3300009137	Grasslands Soil	MHLQRLWWSGLVAAMLGGLVGVTAVAAAGKQFLPVLSTREGANRSIQIPQA
Ga0066709_1016117711	3300009137	Grasslands Soil	MHLKHQWWSVLVAAVLSGLVGVTAVAAGEQFLPVLGVREGGQRFIF
Ga0114129_111716501	3300009147	Populus Rhizosphere	MRVQQQCWSVLVAVMLSGLVEVTAVAAAGAQFLPVLNVREGALKGVGILFFD
Ga0114129_124398611	3300009147	Populus Rhizosphere	MHRQSQWWSVLVAAVLGGLVGVTGVAVAGEQFLPVLTIREGALR
Ga0111538_139717771	3300009156	Populus Rhizosphere	VVTVACVEEKGMRGAPQWWSGLVAAVLGGLVSVTAVGAAGAQFLPVLS
Ga0075423_131278921	3300009162	Populus Rhizosphere	MRLKYQWWSGLVAAVLGGLVGVTMVAAAGEQFLPVLGGREGVGRSVYIPIT
Ga0114945_100634372	3300009444	Thermal Springs	MHIQHQWWTVLVAAVLGGLVGVTAVAAGGEQFLPVLSIREGALRSMMI
Ga0114945_100895122	3300009444	Thermal Springs	MRLQHPWWSVLVAAVLGGLVGVTAVVAAAGEQFLPVLSIREGAVRSMMIPRADA
Ga0114945_101142141	3300009444	Thermal Springs	MHLQRQWWSVLVAAALGGLVGVTVVATAGEQFLPMLVYREGFMRSYGIPGADG
Ga0114945_102714231	3300009444	Thermal Springs	MRLKQPWWRVLVAAALVGLVGVTAVAAAGEQFIPLLTIREGALKASGIPA
Ga0114945_103520822	3300009444	Thermal Springs	MRLKQPWWSVLLAAVLMGLVGVTAVAAGGAQFIPILGYREGALKALGISMTNGFIDYV
Ga0114945_104464811	3300009444	Thermal Springs	MRWQHQWWSVLIAAVLVGLVGVTVVAAAGEQFLPVLSAREGGQRFANIPRVDGYI
Ga0114945_106990151	3300009444	Thermal Springs	MHLQHQWWSVFVAAGLSGLVGVTAVAAGEQFLPVLSTREGALRSQQIPLANGFIDYVTLL
Ga0105249_119008062	3300009553	Switchgrass Rhizosphere	MRVKPQWWVMLVAATLVGLGGMPAGAADEQFIPVLSTREGALRSFHILL
Ga0114944_12990452	3300009691	Thermal Springs	MRWQHQWWSVLIAAVLVGLVGVTVVAAAGEQFLPVLSAREGGQRFANIPRVDGYIAYL
Ga0105070_11122021	3300009815	Groundwater Sand	MHLKRQWWSVLVAAVLLGLVGVTAVAAAGEQFLPI
Ga0126313_116770351	3300009840	Serpentine Soil	MRVQHQYWSVLVAAVLGGLVGVTAVVAGEQFIPVL
Ga0105074_10465401	3300010029	Groundwater Sand	MRLKRQWWSVLVAAVLLGLVGVTAVAAAGEQFLPILGVREGAVRFIQIPRADGII
Ga0126380_105062551	3300010043	Tropical Forest Soil	MRLQLLWWSGLVAAVLGGLVGVTAVAAAGTQFLAVLSMREGALRFGNIPYTNGFIDYVTL
Ga0126382_115742891	3300010047	Tropical Forest Soil	MRLKHLWGSVLVAAGLMGLVGMTGVAAAGEQFIPILTAREGTLKSIGIPRAAGHIAY
Ga0126370_106833482	3300010358	Tropical Forest Soil	MRWQQQWSGLVAGVLWGLVGVTTIAAAGEQFLPVLS
Ga0126370_115775571	3300010358	Tropical Forest Soil	VEDKGMRMQRRWWRRFVAAVLGGLVGVTMVAAAGEQFLPVLGV
Ga0126376_107156282	3300010359	Tropical Forest Soil	MRGQQRWWSVLVAAALGGLVGVTAGAAAGAQFMPVLSIREGALRFNN
Ga0126372_105248731	3300010360	Tropical Forest Soil	MHLQRLWWSGLVAAVLGGLVGVTVAAAGEQFLPVLGVREGANRSLQIPWAN
Ga0126378_103309832	3300010361	Tropical Forest Soil	MRGQQPWWSVLVAAVLGGLLGVSAVAAGEQFLPVLGAREG
Ga0126377_113029423	3300010362	Tropical Forest Soil	MRIQYQWWRGLVAAVLGGLVGVTVVAAAGEQFLPVLGVREG
Ga0126377_119958072	3300010362	Tropical Forest Soil	MRLQYRWWSGLVAAMLVGLVGVTAVAAAGEQFIPILGTREGALRFQLIPMANGFID
Ga0126377_133894811	3300010362	Tropical Forest Soil	MRRKHQWWSGLVAAVLGGLVGVTAVAAGGDQFLPVLSTREGALKAFQAPLANGYLDYLLLLN
Ga0126379_111852181	3300010366	Tropical Forest Soil	MRLKHQWWSVLVAVVLSGLVSVTVVAAGEQFLPVL
Ga0126379_135601871	3300010366	Tropical Forest Soil	VEDKRMHLQRLWWSGLVAAVLGGLVDVTMVAAAGEQFLPMLSTREGASGL*
Ga0136847_112239291	3300010391	Freshwater Sediment	MRLKQLWWSGLVAAVLSGLVGMTAVAVAGEQFLPVLSIRE
Ga0126383_102426241	3300010398	Tropical Forest Soil	MRWQQRWWSVLMAAVLVGLGSVTGVMAAGEQFLPVLSIREGALRFL
Ga0126383_113900451	3300010398	Tropical Forest Soil	MRLKHQWWSVLVAVVLGGLMSVTVAGAADAQFLPVLSIREGALKGL
Ga0126383_120915061	3300010398	Tropical Forest Soil	MRLKQLCWSGLVAAVLGGLVSVTAVAAADAQFLPVLGTREGAFRSVGIRQANGFIDY
Ga0134121_126015441	3300010401	Terrestrial Soil	MRWQQQWCGVLVAAVLIGLGSVTVVAAVGEQFLPV
Ga0137364_112565202	3300012198	Vadose Zone Soil	MRLQHQWGSVLVAAVLGGLVGVTAVAAAGAQFLPVLSV
Ga0137383_104466351	3300012199	Vadose Zone Soil	MRLQQQWWSVLIAAVLGGLVGVTAVAAAGEQFLPVLGVREGALRFVGIP
Ga0137374_106255862	3300012204	Vadose Zone Soil	MRVQQQWWSGLVAVGLGGLVGMTAVAAAGEQFLPVLSRREGALRFTGIPLTDGYIAYLT
Ga0137380_105274164	3300012206	Vadose Zone Soil	MRLKRQWWSVFVAAGLAGLAGVTAVAAAGAQFLPVLSV
Ga0137380_112402171	3300012206	Vadose Zone Soil	MRLQHQWWSLLVAAMLGGLVGVTAMAAAGEQFLPILGIREGGQRFVFS
Ga0137380_113758651	3300012206	Vadose Zone Soil	MHLQQPWWSVLVAAVLVGLVGVTAVAAAGAQFLPVLGVREGALRSEMPP
Ga0137380_114941161	3300012206	Vadose Zone Soil	MLVAAVLGGLVGVTAVAAAGEQFLPVLTTREGALRFLQAPRADGYIAY
Ga0137379_102856091	3300012209	Vadose Zone Soil	MRLQQQWWSVLMAAVLLGLVGVTAVAAGEQFIPVLST
Ga0137379_113281152	3300012209	Vadose Zone Soil	MRWQQQWCGMLVAAVLVGLGGVTLAGAAGEQFIPVLSIRQGALRFLGIPL
Ga0137372_104526981	3300012350	Vadose Zone Soil	MRVQHQWWRGLVAAVLGGLVGVTAVAAAGEQFIPILTAREGALNSL
Ga0137386_108548082	3300012351	Vadose Zone Soil	MGLKQQWWSVLVAAVLSGLVGVTAVAAGEQFIPVLSTREGALKSFQ
Ga0137367_102425271	3300012353	Vadose Zone Soil	MRLQHQWWSVLWATVLGGLVGVTAVAAAGEQFLPILVTREGALRSIGIPRAD
Ga0137368_104480381	3300012358	Vadose Zone Soil	MHIQHQWWSVLVAAMLGGLVGVTAVAAAGEQFILILGA
Ga0137368_105122601	3300012358	Vadose Zone Soil	VEDKGMHLQRQWWSVLVAAVLGGLVGVTAVAAAGEQFI
Ga0137368_106242341	3300012358	Vadose Zone Soil	GMRLQHQWWSVLVAAVLGGLVGVTAVAAAGEQFLPVLGVREGAQRSFQIPLANGSID*
Ga0137375_105430293	3300012360	Vadose Zone Soil	MHLTRQWGSVLVAAVLLGLVGVTVAAAAGAQFIPILGFREGT
Ga0137375_113541592	3300012360	Vadose Zone Soil	MHIQHQWWSVLVAAMLGGLVGVTAVAAAGEQFILILGAREGALKALGIPLSNGSIDYMTL
Ga0137373_101702431	3300012532	Vadose Zone Soil	MRLQHQWWSVLWATVLGGLVGVTAVAAAGEQFLPILVTREGALRSI
Ga0137373_106115731	3300012532	Vadose Zone Soil	MRLKHQWWSGLVAAGLGGLVGVTAVAAAGTQFIPILGFREGTLRALGIPQADGLIAY
Ga0126375_113414432	3300012948	Tropical Forest Soil	MRLKHQWWSILVATVLAGLVGVTAVAAAGEQFLPMLSNREGAQRFIGIPSANGFIAYVT
Ga0126369_103026882	3300012971	Tropical Forest Soil	MRLKQRWWNGLMAAVLGGLVGVTAVAAAGAQFIPILSAREGALRSA
Ga0134076_101515491	3300012976	Grasslands Soil	MRLKQLWWSGLVAAVLGGLVGVTAVAATGAQFIPVLSVREGAMRFGNIPFTNGYIDYLT
Ga0163162_130154762	3300013306	Switchgrass Rhizosphere	MRRQQLWWSGLVAAVLGGLAGMTVVAAGEQFLPVLSAREGAVRSVYTPVT
Ga0075314_11136351	3300014265	Natural And Restored Wetlands	MRVQQQWWSVLVAAVLSGLVGVTAVVAAGAQFVPLPATAREL*
Ga0182035_108418142	3300016341	Soil	MRAQRPWWRELVAAVLGGLVGVTAVAAAGAQFLPVLNVREGALRDVGI
Ga0184610_11555793	3300017997	Groundwater Sediment	MRWQRRWWSGLVAAVLGGLVGVTAVAAAGAQFLPILGAREGAMRAQQIPHAN
Ga0184626_101432462	3300018053	Groundwater Sediment	MRLQYQWWSMLVAAGLGGLVGVTVVAAAGEQFIPILSSRQGAQRFVGIPQA
Ga0184626_104346281	3300018053	Groundwater Sediment	MRLKHQWWSGLIAAVLSGLVSVTAVAATGAQFLPVLGVREGALRSEMTPTAN
Ga0184637_102891353	3300018063	Groundwater Sediment	MRVQQQWWSGLVAAVLGGLVGVTAVAAAGAQFLPILGA
Ga0184637_107803971	3300018063	Groundwater Sediment	MRLQRLWWSVLVAAVLGGLVGVTAVAAADAQFLPI
Ga0184633_102542023	3300018077	Groundwater Sediment	MRVQQPWWSVLVAAVLGGLMGVTAVAAAGEQFIPVLGVR
Ga0184612_104839591	3300018078	Groundwater Sediment	MRLKQLWWSGLVAAGLVGLVGVTVVAAAGAQFLPVLGVREGAARAVLIPLANGYIDY
Ga0184627_101272591	3300018079	Groundwater Sediment	MRLQHWWWSGLVAAGLVGLVGVTAVAAARGEQFLPVLGVRE
Ga0184639_101999291	3300018082	Groundwater Sediment	MRLQHQWWSGLVAAGLLGLVDMTAVAAGAQFLPVLSTREGAQRSAQIPQAN
Ga0184639_103241231	3300018082	Groundwater Sediment	MRVQQPWWSVLVAAVLGGLVGVTAVAAAGEQFIPILSTREGATRAVQIPLANGYIA
Ga0066662_104855741	3300018468	Grasslands Soil	MRLKHQWWSVLVAAVLSGLVGVTAVVAGEQFLPVLGVREGGQRF
Ga0184646_12569481	3300019259	Groundwater Sediment	MHLKHQWWSVLVVVVLGGLVGVTAVAAAGAQFLPVLAAREGAQRRTE
Ga0184646_13074211	3300019259	Groundwater Sediment	MRLQQPWWSMLMAAVLGGLVGVTAVVAAGEQFLPVLTIREGAQRFT
Ga0184646_13079822	3300019259	Groundwater Sediment	MRWQHQWWSGLVAAVLGGLVGVTAVVAAGEQFIPVLSVREG
Ga0187892_101556001	3300019458	Bio-Ooze	MRLEQRWWHVLVAAVLGGLMDVTAVAAAGAQFLPVLSV
Ga0187893_104876612	3300019487	Microbial Mat On Rocks	MCGQHPWGSVLVAAVLGGLVGVTVVAAAGEQFLPVLSTRE
Ga0210378_103139192	3300021073	Groundwater Sediment	MRVQQQWWRMLVAAVLGGLVGVTAVAAPAEQFIPVLVTREGATRALGIPRSDGII
Ga0222625_12501771	3300022195	Groundwater Sediment	MRLKHQWWSVLVAAVLGGLVGVTTVAAGEQFIPILSARE
Ga0212128_101614621	3300022563	Thermal Springs	MRLQHPWWSVLVAAVLGGLVGVTAGAAGEQFIPLLVTREGALRSIQIP
Ga0212128_105794441	3300022563	Thermal Springs	MRLQHQWWSGLVAAVLGGLLGVTAVAAAGEQFLPILGVREGAQR
Ga0209827_105204052	3300025149	Thermal Springs	MQLKEPWWSGLVAAVLLGLVGATAVAAAGAQFLPILGVREGALRSVQI
Ga0209399_100039711	3300025157	Thermal Springs	MHIQHQWWTVLVAAVLGGLVGVTAVAAGGEQFLPVLSIREGALRSMMIPRADGYIAYLT
Ga0209399_102441091	3300025157	Thermal Springs	MHQRHPWWSGLVAAVLGGLVGVPAGAAGSAQFLPVLSTREGAIRSQQIPIANGFIDYVTL
Ga0209399_103799872	3300025157	Thermal Springs	MRLQHPWWSVLVAAVLGGLVGVTAGAAGEQFIPLLV
Ga0207687_112997461	3300025927	Miscanthus Rhizosphere	MRWQQQWCGVLVAAVLIGLGSVTVVAAVGEQFLPVLSIREGALRFLG
Ga0209814_104335392	3300027873	Populus Rhizosphere	MRGAPQWWSGLVAAVLGGLVSVTAVGAAGAQFLPVLST
Ga0209590_100429233	3300027882	Vadose Zone Soil	MHIQHSWWSVLLAAMLGGLVGVTGVAAAGEQFLPILGVREGALRSSQIPLANGFIDYVTL
Ga0247819_111009812	3300028608	Soil	MRLQLLWWSGLVAAGLGGLVGMTAVAAAGAQFIPVLSIREGALRFSNIPVANGF
Ga0307469_119126022	3300031720	Hardwood Forest Soil	MRLQQQWWSVLLAAVLMGLVGVTALAAAGEQFIPVLAVREGALRSFY
Ga0307473_103168071	3300031820	Hardwood Forest Soil	MHLKQRWWSVLVAAVLIGLVGVTAVAAAGEQFFPVLSYREGALR
Ga0306925_112313243	3300031890	Soil	MHLQRQWWSVLVAAMLGGLVGVTAVAAAGEQFLPVLSIREGVLRFHEIP
Ga0310900_106729022	3300031908	Soil	MRIQQQWWSVLVSTVLNGLVGVTVVAAGEQFLPVL
Ga0310916_107543232	3300031942	Soil	MRLQQLWWSGLVAAGAVGWGEAAVAAGAQFLPILGVREGT
Ga0310909_108510632	3300031947	Soil	MRGQQPWWSVLLAAVLGGLVGVTAGAAAGAQFLPVLGTREGALRAAQIPLANGFI
Ga0326597_107980531	3300031965	Soil	MRLQQPWWSVVVAAVLGGLVGVTAVAAAGEQFIPLLVIRE
Ga0310890_104160052	3300032075	Soil	MHLKQLWWSGLVAAVLVGLGGVTLAGAAGEQFIPVL
Ga0307415_1022434402	3300032126	Rhizosphere	MHLRRQWWRGLVAAVLGGLVSVTAVVAASEQFLPVLGVREG
Ga0364934_0118445_2_217	3300034178	Sediment	LEDKTIWEDKTMHIQHRWWSVLVAAVLSGLVGVTAAAAAGEQFLPVLSTREGARRSVQIPLANGFIDYVTLL
Ga0364934_0389536_2_136	3300034178	Sediment	MRLQHQWWSGLVAAVLGGLMGVTGVAAAGEQFLPVLGVREGGQRF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F058849

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences