NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F058861

Metagenome / Metatranscriptome Family F058861

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F058861
Family Type Metagenome / Metatranscriptome
Number of Sequences 134
Average Sequence Length 71 residues
Representative Sequence MLMVMSTTTIPVKPETLARLRSYKVGGSTYDDVLNDLMDDRPPAGFIREHLRRLKEEEFSDWKDVRKRLRL
Number of Associated Samples 104
Number of Associated Scaffolds 134

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Archaea
% of genes with valid RBS motifs 8.96 %
% of genes near scaffold ends (potentially truncated) 35.07 %
% of genes from short scaffolds (< 2000 bps) 75.37 %
Associated GOLD sequencing projects 90
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Archaea (73.881 % of family members)
NCBI Taxonomy ID 2157
Taxonomy All Organisms → cellular organisms → Archaea

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(26.866 % of family members)
Environment Ontology (ENVO) Unclassified
(63.433 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(65.672 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 54.93%    β-sheet: 5.63%    Coil/Unstructured: 39.44%
Feature Viewer
Powered by Feature Viewer

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 134 Family Scaffolds
PF05016ParE_toxin 28.36
PF00581Rhodanese 20.90
PF00106adh_short 4.48
PF02566OsmC 2.99
PF01946Thi4 2.24
PF13743Thioredoxin_5 2.24
PF13847Methyltransf_31 1.49
PF00071Ras 1.49
PF16363GDP_Man_Dehyd 0.75
PF01040UbiA 0.75
PF02547Queuosine_synth 0.75
PF01980TrmO 0.75
PF04014MazE_antitoxin 0.75
PF04967HTH_10 0.75
PF00127Copper-bind 0.75
PF12681Glyoxalase_2 0.75
PF00903Glyoxalase 0.75

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 134 Family Scaffolds
COG1764Organic hydroperoxide reductase OsmC/OhrADefense mechanisms [V] 2.99
COG1765Uncharacterized OsmC-related proteinGeneral function prediction only [R] 2.99
COG1635Thiazole synthase/Archaeal ribulose 1,5-bisphosphate synthetaseCarbohydrate transport and metabolism [G] 2.24
COG0809S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase)Translation, ribosomal structure and biogenesis [J] 0.75
COG1720tRNA (Thr-GGU) A37 N6-methylaseTranslation, ribosomal structure and biogenesis [J] 0.75

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms86.57 %
UnclassifiedrootN/A13.43 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002120|C687J26616_10144452All Organisms → cellular organisms → Archaea748Open in IMG/M
3300002123|C687J26634_10030084Not Available2125Open in IMG/M
3300002123|C687J26634_10167987All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon758Open in IMG/M
3300002243|C687J29039_10175043All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon761Open in IMG/M
3300002485|C687J35088_10031137All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia1755Open in IMG/M
3300002558|JGI25385J37094_10031350All Organisms → cellular organisms → Archaea1874Open in IMG/M
3300002558|JGI25385J37094_10049053All Organisms → cellular organisms → Archaea1421Open in IMG/M
3300002560|JGI25383J37093_10010442All Organisms → cellular organisms → Bacteria3040Open in IMG/M
3300002561|JGI25384J37096_10050510All Organisms → cellular organisms → Archaea → Euryarchaeota1580Open in IMG/M
3300002908|JGI25382J43887_10038691All Organisms → cellular organisms → Archaea → Euryarchaeota2591Open in IMG/M
3300002911|JGI25390J43892_10017479All Organisms → cellular organisms → Archaea → Euryarchaeota1713Open in IMG/M
3300005166|Ga0066674_10028579All Organisms → cellular organisms → Bacteria2454Open in IMG/M
3300005171|Ga0066677_10120105Not Available1412Open in IMG/M
3300005171|Ga0066677_10150965All Organisms → cellular organisms → Archaea1272Open in IMG/M
3300005180|Ga0066685_10260287All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon1198Open in IMG/M
3300005181|Ga0066678_10451502All Organisms → cellular organisms → Archaea854Open in IMG/M
3300005446|Ga0066686_10085479All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon2006Open in IMG/M
3300005446|Ga0066686_11031387All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → Methanosarcinaceae → Methanosarcina → Methanosarcina mazei532Open in IMG/M
3300005447|Ga0066689_10501477All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon766Open in IMG/M
3300005450|Ga0066682_10002315All Organisms → cellular organisms → Bacteria8152Open in IMG/M
3300005552|Ga0066701_10154531All Organisms → cellular organisms → Archaea → Euryarchaeota1383Open in IMG/M
3300005555|Ga0066692_10138426All Organisms → cellular organisms → Archaea1485Open in IMG/M
3300005555|Ga0066692_10501440Not Available773Open in IMG/M
3300005555|Ga0066692_10600001All Organisms → cellular organisms → Bacteria691Open in IMG/M
3300005556|Ga0066707_10386824All Organisms → cellular organisms → Archaea → Euryarchaeota912Open in IMG/M
3300005557|Ga0066704_10768145All Organisms → cellular organisms → Archaea → Euryarchaeota601Open in IMG/M
3300005558|Ga0066698_10293545All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1126Open in IMG/M
3300005559|Ga0066700_10885149All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon594Open in IMG/M
3300005569|Ga0066705_10005581All Organisms → cellular organisms → Bacteria5496Open in IMG/M
3300005575|Ga0066702_10549926All Organisms → cellular organisms → Bacteria698Open in IMG/M
3300005586|Ga0066691_10642949All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon629Open in IMG/M
3300005586|Ga0066691_10956215All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon503Open in IMG/M
3300006794|Ga0066658_10409574Not Available736Open in IMG/M
3300006796|Ga0066665_10027932All Organisms → cellular organisms → Bacteria3656Open in IMG/M
3300006797|Ga0066659_10138834Not Available1712Open in IMG/M
3300006797|Ga0066659_10143913All Organisms → cellular organisms → Archaea1686Open in IMG/M
3300006797|Ga0066659_10720667Not Available817Open in IMG/M
3300006800|Ga0066660_10614833All Organisms → cellular organisms → Archaea907Open in IMG/M
3300009012|Ga0066710_100248092All Organisms → cellular organisms → Archaea2574Open in IMG/M
3300009012|Ga0066710_100696052All Organisms → cellular organisms → Archaea1549Open in IMG/M
3300009012|Ga0066710_101954857All Organisms → cellular organisms → Archaea874Open in IMG/M
3300009012|Ga0066710_102681562Not Available712Open in IMG/M
3300009038|Ga0099829_10471043All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon1042Open in IMG/M
3300009088|Ga0099830_10034655All Organisms → cellular organisms → Archaea → Euryarchaeota3444Open in IMG/M
3300009088|Ga0099830_11469889All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon567Open in IMG/M
3300009137|Ga0066709_100825893Not Available1345Open in IMG/M
3300009137|Ga0066709_100999893Not Available1224Open in IMG/M
3300009137|Ga0066709_101584061All Organisms → cellular organisms → Archaea939Open in IMG/M
3300009137|Ga0066709_102098896All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium781Open in IMG/M
3300009137|Ga0066709_102173849All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon766Open in IMG/M
3300009806|Ga0105081_1043778All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon634Open in IMG/M
3300009812|Ga0105067_1046793All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon677Open in IMG/M
3300009813|Ga0105057_1048995All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon692Open in IMG/M
3300009815|Ga0105070_1001162All Organisms → cellular organisms → Bacteria3472Open in IMG/M
3300010085|Ga0127445_1021453All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon528Open in IMG/M
3300010093|Ga0127490_1066056All Organisms → cellular organisms → Archaea1201Open in IMG/M
3300010104|Ga0127446_1075820All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon579Open in IMG/M
3300010301|Ga0134070_10068574All Organisms → cellular organisms → Archaea1209Open in IMG/M
3300010304|Ga0134088_10178715All Organisms → cellular organisms → Archaea1014Open in IMG/M
3300010304|Ga0134088_10215477All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon921Open in IMG/M
3300010320|Ga0134109_10011757All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon2533Open in IMG/M
3300010320|Ga0134109_10118962Not Available932Open in IMG/M
3300010325|Ga0134064_10474740All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon514Open in IMG/M
3300010333|Ga0134080_10022214Not Available2361Open in IMG/M
3300011269|Ga0137392_10149597All Organisms → cellular organisms → Archaea1883Open in IMG/M
3300012189|Ga0137388_10494106All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon1136Open in IMG/M
3300012206|Ga0137380_10450948Not Available1137Open in IMG/M
3300012208|Ga0137376_10341170All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon1301Open in IMG/M
3300012355|Ga0137369_11073385All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon528Open in IMG/M
3300012356|Ga0137371_10503021All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon935Open in IMG/M
3300012362|Ga0137361_10945648All Organisms → cellular organisms → Bacteria780Open in IMG/M
3300012362|Ga0137361_11671053All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon557Open in IMG/M
3300012403|Ga0134049_1053673All Organisms → cellular organisms → Archaea1308Open in IMG/M
3300012931|Ga0153915_11734670All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon731Open in IMG/M
3300012964|Ga0153916_10192776All Organisms → cellular organisms → Archaea2023Open in IMG/M
3300012972|Ga0134077_10204040All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon806Open in IMG/M
3300012975|Ga0134110_10174445All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon895Open in IMG/M
3300012976|Ga0134076_10472634All Organisms → cellular organisms → Archaea569Open in IMG/M
3300014150|Ga0134081_10432133All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon500Open in IMG/M
3300014157|Ga0134078_10083370All Organisms → cellular organisms → Bacteria1168Open in IMG/M
3300015359|Ga0134085_10029825Not Available2119Open in IMG/M
3300017654|Ga0134069_1006175All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon3363Open in IMG/M
3300017657|Ga0134074_1023725All Organisms → cellular organisms → Archaea → Euryarchaeota2033Open in IMG/M
3300017657|Ga0134074_1206125All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon699Open in IMG/M
3300017659|Ga0134083_10521283All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon534Open in IMG/M
3300018431|Ga0066655_10027050Not Available2749Open in IMG/M
3300018431|Ga0066655_10433388All Organisms → cellular organisms → Archaea → Euryarchaeota868Open in IMG/M
3300018431|Ga0066655_10969647All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon585Open in IMG/M
3300018433|Ga0066667_10177244All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon1539Open in IMG/M
3300018433|Ga0066667_10550864All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon957Open in IMG/M
3300018468|Ga0066662_10443537Not Available1159Open in IMG/M
3300018468|Ga0066662_10900947All Organisms → cellular organisms → Archaea → Euryarchaeota868Open in IMG/M
3300018482|Ga0066669_11066754Not Available729Open in IMG/M
3300025146|Ga0209322_10152429Not Available1024Open in IMG/M
3300025159|Ga0209619_10005979All Organisms → cellular organisms → Archaea → Euryarchaeota8535Open in IMG/M
3300025159|Ga0209619_10009904All Organisms → cellular organisms → Archaea → Euryarchaeota6531Open in IMG/M
3300025160|Ga0209109_10419443All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon620Open in IMG/M
3300025164|Ga0209521_10238148All Organisms → cellular organisms → Archaea1068Open in IMG/M
3300025167|Ga0209642_10016668All Organisms → cellular organisms → Archaea → Euryarchaeota4361Open in IMG/M
3300025174|Ga0209324_10018912All Organisms → cellular organisms → Archaea4714Open in IMG/M
3300025312|Ga0209321_10009351All Organisms → cellular organisms → Archaea6279Open in IMG/M
3300025312|Ga0209321_10235858All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon926Open in IMG/M
3300025319|Ga0209520_10253882All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon RBG_16_67_271091Open in IMG/M
3300025326|Ga0209342_10808233All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon737Open in IMG/M
3300025327|Ga0209751_11130619All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon580Open in IMG/M
3300026277|Ga0209350_1004015All Organisms → cellular organisms → Bacteria5311Open in IMG/M
3300026295|Ga0209234_1002982All Organisms → cellular organisms → Bacteria6439Open in IMG/M
3300026296|Ga0209235_1217506All Organisms → cellular organisms → Archaea → Euryarchaeota624Open in IMG/M
3300026297|Ga0209237_1251261All Organisms → cellular organisms → Archaea543Open in IMG/M
3300026301|Ga0209238_1065992All Organisms → cellular organisms → Archaea → Euryarchaeota1278Open in IMG/M
3300026309|Ga0209055_1024168All Organisms → cellular organisms → Archaea2871Open in IMG/M
3300026315|Ga0209686_1002294All Organisms → cellular organisms → Archaea9063Open in IMG/M
3300026325|Ga0209152_10038051All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon1662Open in IMG/M
3300026332|Ga0209803_1003681All Organisms → cellular organisms → Bacteria9152Open in IMG/M
3300026333|Ga0209158_1000714All Organisms → cellular organisms → Archaea → Euryarchaeota23572Open in IMG/M
3300026524|Ga0209690_1114852All Organisms → cellular organisms → Archaea → Euryarchaeota1072Open in IMG/M
3300026524|Ga0209690_1195537All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon649Open in IMG/M
3300026532|Ga0209160_1048322All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon2486Open in IMG/M
3300026537|Ga0209157_1088652Not Available1498Open in IMG/M
3300026538|Ga0209056_10005234All Organisms → cellular organisms → Archaea13530Open in IMG/M
3300026538|Ga0209056_10065087All Organisms → cellular organisms → Archaea → Euryarchaeota3163Open in IMG/M
3300026548|Ga0209161_10162686All Organisms → cellular organisms → Archaea1279Open in IMG/M
3300027068|Ga0209898_1027352All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon719Open in IMG/M
3300027169|Ga0209897_1042010All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon664Open in IMG/M
3300027324|Ga0209845_1029276All Organisms → cellular organisms → Bacteria888Open in IMG/M
3300027332|Ga0209861_1054500All Organisms → cellular organisms → Archaea590Open in IMG/M
3300027846|Ga0209180_10244587All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon1033Open in IMG/M
3300027862|Ga0209701_10094143All Organisms → cellular organisms → Archaea1877Open in IMG/M
3300028536|Ga0137415_10229258All Organisms → cellular organisms → Archaea → Euryarchaeota1670Open in IMG/M
3300028536|Ga0137415_10826708All Organisms → cellular organisms → Archaea736Open in IMG/M
3300031576|Ga0247727_10486353All Organisms → cellular organisms → Archaea964Open in IMG/M
(restricted) 3300031876|Ga0315310_10429689All Organisms → cellular organisms → Archaea528Open in IMG/M
(restricted) 3300031877|Ga0315314_1010772All Organisms → cellular organisms → Bacteria5931Open in IMG/M
3300034099|Ga0373902_185446All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon507Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil26.87%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil20.90%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil15.67%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil11.19%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil6.72%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil5.97%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand5.97%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil2.24%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment1.49%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands1.49%
BiofilmEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm0.75%
Sediment SlurryEngineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry0.75%

Visualization
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002120Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_2EnvironmentalOpen in IMG/M
3300002123Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_3EnvironmentalOpen in IMG/M
3300002243Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_2EnvironmentalOpen in IMG/M
3300002485Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_1EnvironmentalOpen in IMG/M
3300002558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cmEnvironmentalOpen in IMG/M
3300002560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cmEnvironmentalOpen in IMG/M
3300002561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cmEnvironmentalOpen in IMG/M
3300002908Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cmEnvironmentalOpen in IMG/M
3300002911Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cmEnvironmentalOpen in IMG/M
3300005166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123EnvironmentalOpen in IMG/M
3300005171Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005181Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127EnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005447Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138EnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150EnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005556Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156EnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005569Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154EnvironmentalOpen in IMG/M
3300005575Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151EnvironmentalOpen in IMG/M
3300005586Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140EnvironmentalOpen in IMG/M
3300006794Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107EnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009806Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_50_60EnvironmentalOpen in IMG/M
3300009812Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_50_60EnvironmentalOpen in IMG/M
3300009813Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_10_20EnvironmentalOpen in IMG/M
3300009815Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10EnvironmentalOpen in IMG/M
3300010085Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_0_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010093Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_16_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010104Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_16_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015EnvironmentalOpen in IMG/M
3300010304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015EnvironmentalOpen in IMG/M
3300010320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015EnvironmentalOpen in IMG/M
3300010325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaGEnvironmentalOpen in IMG/M
3300010333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012355Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012403Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012931Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaGEnvironmentalOpen in IMG/M
3300012964Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaGEnvironmentalOpen in IMG/M
3300012972Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300012975Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015EnvironmentalOpen in IMG/M
3300012976Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300014150Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300014157Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300015359Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015EnvironmentalOpen in IMG/M
3300017654Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300017657Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015EnvironmentalOpen in IMG/M
3300017659Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300025146Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 1EnvironmentalOpen in IMG/M
3300025159Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 3EnvironmentalOpen in IMG/M
3300025160Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 2EnvironmentalOpen in IMG/M
3300025164Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 4EnvironmentalOpen in IMG/M
3300025167Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 19_2 (SPAdes)EnvironmentalOpen in IMG/M
3300025174Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 3EnvironmentalOpen in IMG/M
3300025312Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 4 - CSP-I_5_4EnvironmentalOpen in IMG/M
3300025319Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 1EnvironmentalOpen in IMG/M
3300025326Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_2 (SPAdes)EnvironmentalOpen in IMG/M
3300025327Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_1 (SPAdes)EnvironmentalOpen in IMG/M
3300026277Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026295Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026296Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026297Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026309Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)EnvironmentalOpen in IMG/M
3300026315Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)EnvironmentalOpen in IMG/M
3300026325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)EnvironmentalOpen in IMG/M
3300026332Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)EnvironmentalOpen in IMG/M
3300026333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)EnvironmentalOpen in IMG/M
3300026524Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)EnvironmentalOpen in IMG/M
3300026532Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)EnvironmentalOpen in IMG/M
3300026537Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)EnvironmentalOpen in IMG/M
3300026538Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)EnvironmentalOpen in IMG/M
3300026548Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)EnvironmentalOpen in IMG/M
3300027068Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_50_60 (SPAdes)EnvironmentalOpen in IMG/M
3300027169Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_10_20 (SPAdes)EnvironmentalOpen in IMG/M
3300027324Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_50_60 (SPAdes)EnvironmentalOpen in IMG/M
3300027332Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_30_40 (SPAdes)EnvironmentalOpen in IMG/M
3300027846Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027862Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300031576Biofilm microbial communities from Wishing Well Cave, Virginia, United States - WW16-25EnvironmentalOpen in IMG/M
3300031876 (restricted)Freshwater sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - TDP5EnvironmentalOpen in IMG/M
3300031877 (restricted)Freshwater sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - TDP9EnvironmentalOpen in IMG/M
3300034099Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - B1A0.3EngineeredOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
C687J26616_1014445223300002120SoilMATTTVPVKPETLSKLRAYKVGGATYDDVLNEFMDEQPPEAFIREHLRRLKEDTFEDWTSVRKRLRL*
C687J26634_1003008433300002123SoilMXLMVMSTTTIPVKPETLARLRAYKLGGSTYDDVLNDLMDDRPPAGFIREHLRRLKEEEFSDWKDVRKRLRL*
C687J26634_1016798723300002123SoilMILMVMSTTTIPVKPETLARLRAYKLGGSTYDDVLNDLMDDRPPAGFIREHLRRLKEEEFSDWKDVRKRLRL*
C687J29039_1017504313300002243SoilGSRIPGQTINTIKFMVLMVMSTTTIPVKPETLARLRAYKLGGSTYDDVLNDLMDDRPPAGFIREHLRRLKEEEFSDWKDVRKRLRL*
C687J35088_1003113733300002485SoilMVLMVMSTTTIPVKPETLARLRAYKLGGSTYDDVLNDLMDDRPPAGFIREHLRRLKEEEFSDWKDVRKRLRL*
JGI25385J37094_1003135033300002558Grasslands SoilMPTTTVPVKPETLARLRSYKVGGATYDDVLNELMDDRPPVGFIREHLRRLKEEEFSDWKDVRKRLRL*
JGI25385J37094_1004905333300002558Grasslands SoilMSTTTVPVKPETLARLRAYKVGGATYDDVLNELMDDRPPVGFIREHLRRLKEEEFSDWKVVRKRLRL*
JGI25383J37093_1001044243300002560Grasslands SoilMPTTTVPVKPETLARLRSYRVGGATYDDVLNELMDDRPPVGFIREHLRLLKEEEFSDWKDVRKRLRL*
JGI25384J37096_1005051033300002561Grasslands SoilMPTTTVPVKPETLARLRSNRVGGATYDDVLNELMDDRPPMGFIREHLRLLKEEEFSDWKDVRKRLRL*
JGI25382J43887_1003869123300002908Grasslands SoilMPTTTVPVKPETLARLRSNRVGGATYDDVLNELMDDRPPXGFIREHLRLLKEEEFSDWKDVRKRLRL*
JGI25390J43892_1001747923300002911Grasslands SoilMPTTTVPVKPETLARLRSYRVGGATYDDVLNELMDDRPPMGFIREHLRLLKEEEFSDWKDVRKRLRL*
Ga0066674_1002857933300005166SoilMMLIVMPTTTIPVKRETWARLRSYKVGGATYDDVLNDLMDDRPPAGFIREHLRRLKEEAFSDWEDVRKRLRL*
Ga0066677_1012010513300005171SoilMMLIGMPTTTIPVKRETWARLRSYRVGGATYDDVLNDLMDDCPPAGFIREHLRRLKEEEFSDWQDVRKRLRL*
Ga0066677_1015096533300005171SoilTTTIPVKRETWARLRSYKVGGATYDDVLNDLMDDRPPAGFIREHLRRLKEEAFSDWEDVRKRLRL*
Ga0066685_1026028723300005180SoilMMLMVMSTTTIPVKPETLARLRSYKVGGSTYDDVLNDLMDDRPPAGFIREHLRRLKEEEFSDWKDVRKRLRL*
Ga0066678_1045150213300005181SoilTIPMKRETKARLRSYKVGGATYDDVLNDLMDDRPPAGFIRKHLQSLKEEEFSDWEDVRKRLRL*
Ga0066686_1008547923300005446SoilMRTALTINMMVVIVMMMATTTVPVKPATLRRLRSYKIGGTTYDEVLNDLMDDNPPVAFIREHLRRLREEPDIPWDEVRKRLRL*
Ga0066686_1103138713300005446SoilTTVPVKPETLARLRSYRVGGATYDDVLNELMDDRPPMGFIREHLRRLKEEEFSDWKDVRKRLRL*
Ga0066689_1050147723300005447SoilVVAINTIKLMMLMVMSTTTIPVKPETLARLRSYKVGGSTYDDVLNDLMDDRPPAGFIREHLRRLKEEEFSDWKDVRKRLRL*
Ga0066682_1000231573300005450SoilMLIVMPTTTIPVKRETWARLRSYKVGGATYDDVLNDLMDDRPPAGFIREHLRRLKEEEFSDWEDV
Ga0066701_1015453123300005552SoilVKPETLARLRSYRVGGATYDDVLNELMDDRPPVGFIREHLRLLKEEEFSDWKDVRKRLRL
Ga0066692_1013842633300005555SoilKRETKARLRSYKVGGATYDDVLNDLMDDRPPAGFIREHLRRLKEEEFSDWEDARKRLRL*
Ga0066692_1050144023300005555SoilMMLMVMPTTTIPMKRKTKARLRSYEVGGATYDDVLNDLMDDRPPAGFIRKHLQSLKEEEFSDWEDVRKRLRL*
Ga0066692_1060000133300005555SoilKLMILMVMSTTTVPVKPETLARLRSYKVGGSTYDDVLNDLMDDRPPVGFIREHLRRLKEEEFSDWKDVRKRLRL*
Ga0066707_1038682423300005556SoilMPTTTVPVKPETLARLRSYRVGGATYDDVLNELMDDRPPVGFIREHLRLLKEEEFS
Ga0066704_1076814523300005557SoilMPTTTVPVKPETLARLRSYKVGGATYDDVLNELMDDRPPVGFIREHLRRLKEEEF
Ga0066698_1029354533300005558SoilVVAINTIKLMMLMVMSTTTIPVKPETLARLRSYKVGGSTYDDVLNDLMDDRPPAGFIREHLRRLKEEEF
Ga0066700_1088514913300005559SoilLHHRATAINTINLMMLIVMPTTTIPVKRETWARLRAYKVGGATYDDVLNDLMDDRPPAGFVREHLRRLKEEEFSAWEDVRKRLRL*
Ga0066705_1000558133300005569SoilLHHRATTVNTINLMMLIGMPTTTIPVKRETWARLRSYRVGGATYDDVLNDLMDDCPPAGFIREHLRRLKEEEFSDWQDVRKRLRL*
Ga0066702_1054992633300005575SoilHGAITIDTINLMMLMVMPTTTIPMKRKTKARLRSYEVGGATYDDVLNDLMDDRPPAGFIRKHLQSLKEEEFSDWEDVRKRLRL*
Ga0066691_1064294913300005586SoilLHHGAITIDTINLMMLMVMPTTTIPMKRKTKARLRSYEVGGATYDDVLNDLMDDRPPAGFIRKHLQSLKEEEFSDWEDVRKRLRL*
Ga0066691_1095621513300005586SoilWARLRSYKVGGATYDDVLNDLMDDRPPAGFIREHLRRLKEEEFSDWEDVRKRLRL*
Ga0066658_1040957423300006794SoilINLMMLIGMPTTTIPVKRETWARLRSYRVGGATYDDVLNDLMDDCPPAGFIREHLRRLKEEEFSDWQDVRKRLRL*
Ga0066665_1002793273300006796SoilMLMVMSTTTIPVKPETLARLRSYKVGGSTYDDVLNDLMDDRPPAGFIREHLRRLKEEEFSDWKDVRKRLRL*
Ga0066659_1013883433300006797SoilMPTTTVPVKPETLARLRSDRVGGATYDDVLNELMDDRPPVGFIREHLRLLKEEEFSDWKDVRKRLRL*
Ga0066659_1014391333300006797SoilMPTTTIPVKRETWARLRAYKVGGATYDDVLNDLMDDRPPAGFVREHLRRLKEEEFSAWEDVRKRLRL*
Ga0066659_1072066713300006797SoilMVMPTTTIPMKRETKARLRSYKVGGATYDDVLNDLMDDRPPAGFIREHLRRLKEEEFSDW
Ga0066660_1061483313300006800SoilHRTINIDTINLMMLIVMPTTTIPVKRETWARLRSYKVGGATYDDVLNDLMDDRPPAGFIREHLRRLKEEEFSHWEDVRKRLRL*
Ga0066710_10024809233300009012Grasslands SoilMLMVMFTTTIPVKPETLARLRSYKVGGSTYDDVLNDLMDDRPPAGFIREHLRRLKEEEFSDWKDVRKRLRL
Ga0066710_10069605243300009012Grasslands SoilVRVLGSATHRPLAINTIKRMILIVMPTTTIPVKRETLARLRSYKVGGATYDDVLNDFMDDRPPTGFIREHLRRLKEEEFSDWKDLRKRLRL
Ga0066710_10195485723300009012Grasslands SoilVYEERSPIRQYLTINTIKLMILMAMSTTTTIPVKPETLARLRSYKLGGSTYDDVLNDLMDDQPPAGFIREHLRRLKEEEFSDWKDVRKRLRW
Ga0066710_10268156233300009012Grasslands SoilMPTTTIPVKRETWARLRAYKVGGATYDDVLNDLMDDRPPAGFVREHLRRLKEEEFSDWKDVRKRLRL
Ga0099829_1047104313300009038Vadose Zone SoilMTTTTVPVKPETLARLRAYKVGGSTYDDVLNDLMDERPPMGFIQEHLRRLKEEPFEDWKDVRKRLRL*
Ga0099830_1003465563300009088Vadose Zone SoilMLIVMTTTTVPVKPETLARLRAYKVGGSTYDDVLNDLMDERPPMGFIQEHLRRLKEEPFEDWKDVRKRLRL*
Ga0099830_1146988913300009088Vadose Zone SoilMSTTTVPVKPETLARLRSYKVGGATYDDVLNELMDDRPPVGFIREHLRRLKEEEFSDWKDVRKRLRL*
Ga0066709_10082589333300009137Grasslands SoilMMLIVMPTTTIPVKRETWARLRAYKVGGATYDDVLNDLMDDRPPAGFVREHLRRLKEEEFSAWEDVRKRLRL*
Ga0066709_10099989323300009137Grasslands SoilMMLRVMPTATIPAKREARGALAFVKVGGVTSDDVQKYLIDDRPPGGFTREHLRRLEEEEFSDWKDVRKRLRL*
Ga0066709_10158406123300009137Grasslands SoilMILIVMPTTTIPVKRETLARLRSYKVGGATYDDVLNDFMDDRPPTGFIREHLRRLKEEEFSDWKDLRKRLRL*
Ga0066709_10209889613300009137Grasslands SoilMMLIVMPTTTIPVKRETWARLRSYKVGGATYDDVLNDLMDDRPPAGFIREHLRRLKEEEF
Ga0066709_10217384913300009137Grasslands SoilMPTTTIPVKRETWARLRAYKVGGATYDDVLNDLMDDRPPAGFVREHLRRLKEEEFSDWKDVRKRLRL*
Ga0105081_104377813300009806Groundwater SandMMLIAMATTTIPVKPETLARLRVYKVGGSTYDDVLNDLMDDRPPAGFIREHLRRLKEEEFSDWKDVRKRLRL*
Ga0105067_104679323300009812Groundwater SandMMLIAMATTTIPVKPETLARLRVYKVGGSTYDDVLNDLMDDRPPGGFIREHLRRLKEEEFSDWKDVRKRLRL*
Ga0105057_104899523300009813Groundwater SandMMLIAMVTTTIPVKPETLARLRVYKVGGSTYDDVLNDLMDDRPPGGFIREHLRRLKEEEFSDWKDVRKRLRL*
Ga0105070_100116243300009815Groundwater SandMMVVIMMMMATTTVPVKPQTLRRLRSYKIGGTTYDEVLNDLMDDNPPGPFVREHLRRLREEPDIPWGEVRKRLRL*
Ga0127445_102145313300010085Grasslands SoilTWARLRSYKVGGATYDDVLNDLMDDRPPAGFIREHLRRLKEEAFSDWEDVRKRLRL*
Ga0127490_106605613300010093Grasslands SoilPVKRETWARLRSYKVGGATYDDVLNDLMDDRPPAGFIREHLRRLKEEEFSDWQDVRKRLRL*
Ga0127446_107582033300010104Grasslands SoilETWARLRSYRVGGATYDDVLNDLMDDCPPAGFIREHLRRLKEEEFSDWQDVRKRLRL*
Ga0134070_1006857413300010301Grasslands SoilMPTTTIPVKRETWARLRSYRVGGATYDDVLNDLMDDCPPAGFIREHLRRLKEEEFSDWQDVRKRLRL*
Ga0134088_1017871533300010304Grasslands SoilMMVVIVMMMATTTVPVKPATLRRLRSYKIGGTTYDEVLNDLMDDNPPVAFIREHLRRLREEPDIPWDEVRKRLRL*
Ga0134088_1021547723300010304Grasslands SoilMMLIGMPTTTIPVKRETWARLRSYRVGGATYDDVLNDLMDDCPPAGFIREHLRTLKEEEFSDWQDVRKRLRL*
Ga0134109_1001175743300010320Grasslands SoilMMPIGMPTTTIPVKRETWARLRSYRVGGATYDDVLNDLMDDCPPAGFIREHLRRLKEEEFSDWQDVRKRLRL*
Ga0134109_1011896213300010320Grasslands SoilMLIVMPTTTIPVKRETWARLRSYKVGGATYDDVLNDLMDDRPPAGFIREHLRRLKEEAFSDWEDVRKRLRL*
Ga0134064_1047474013300010325Grasslands SoilMMLIGMPTTTIPVKRETWARLRSYRVGGATYDDVLNDLMDDCPPAGFIREHLRRLKEEEFSDW
Ga0134080_1002221433300010333Grasslands SoilMPTTTVPVKPETLARLRSYRVGGATYDDVLNEPMDDRPPMGFIREHLRLLKEEEFSDWKDVRKRLRL*
Ga0137392_1014959733300011269Vadose Zone SoilLIILIVMTTTTVPVKPETLARLRAYKVGGSTYDDVLNDLMDERPPMGFIQEHLRRLKEEPFEDWKDVRKRLRL*
Ga0137388_1049410633300012189Vadose Zone SoilMPTTTVPVKPETLARLRFYKVGGATYDDVLNELMDDRPPVGFIREHLRRLKEEEFSDWKDVRKRLRL*
Ga0137380_1045094833300012206Vadose Zone SoilMLIVMPTTTIPVKRETWARLRAYKVGGATYDDVLNDLMDDRPPAGFIREHLRRLKEEEFSDW
Ga0137376_1034117033300012208Vadose Zone SoilMSIVMPTTTIPVKRETWARLRAYKVGGATYDDVLNDLMDDRPPAGFVREHLRRLKEEEFSDWKDVRKRLRL*
Ga0137369_1107338513300012355Vadose Zone SoilMILIAMSTTTVPVKKETLARLRSYKVGGATYDDVLNDLMDERPPAGFIREHLRQLKEEAFSDWKDVRKRLRL*
Ga0137371_1050302123300012356Vadose Zone SoilMEPDLHHRATTINTINLIILIVMPTTTIPVKRETWARLRSYKVGGATYDDVLNDLMDDRPPAGFIREHLRRLKEEEFSDWEDVRMRLRL*
Ga0137361_1094564813300012362Vadose Zone SoilRLPIHRWVAINTIKLMILMVMSTTTVPVKPETLARLRSYKVGGSTYDDVLNDLMDDQPPVGFIREHLRRLKEEEFSDWKDVRKRLRL*
Ga0137361_1167105313300012362Vadose Zone SoilMMLMVMSTTTVPVKPETLARLRSYKVGGSTYDDVLNDLMDDRPPAGFIREHLRRLKEEEFSDWKDVRKRLRL*
Ga0134049_105367313300012403Grasslands SoilIPVKRETWARLRSYKVGGATYDDVLNDLMDDRPPAGFIREHLRRLKEEAFSDWEDVRKRLRL*
Ga0153915_1173467023300012931Freshwater WetlandsMVMATTTVPVKPETLVRLRSYKVGGATYDDVINDLMDDQPPEGFIREHLRRLKEETFSDWTDVRKRLRL*
Ga0153916_1019277613300012964Freshwater WetlandsMILMVMATTTVPVKPETLARLRSYKVGGATYDDVLNDLMDDRPPEGFIRELLRRLKEETFSDWRDV
Ga0134077_1020404023300012972Grasslands SoilMLIVMPTTTIPVKRETWARLRSYKVGGATYDDVLNDLMDDRPPAGFIREHLRRLKEEEFSDWQDVRKRLRL*
Ga0134110_1017444523300012975Grasslands SoilMMLIGMPTTTIPVKRETWARLRSYRVGGATYDDVLNDLMDDCPPAGFIREHLRRLKEEAFSDWEDVRKRLRP*
Ga0134076_1047263423300012976Grasslands SoilIVMMMATTTVPVKPATLRRLRSYKIGGTTYDEVLNDLMDDNPPVAFIREHLRRLREEPDIPWDEVRKRLRL*
Ga0134081_1043213313300014150Grasslands SoilETLARLRSYRVGGATYDDVLNELMDDRPPVGFIREHLRLLKEEEFSDWKDVRKRLRL*
Ga0134078_1008337033300014157Grasslands SoilMMLIGMPTTTIPVKRETWARLRSYRVGGATYDNVLNDLMDDCPPAGFIREHLRRLKEEAFSDWEDVRKRLRL*
Ga0134085_1002982533300015359Grasslands SoilMLIGMPTTTIPVKRETWARLRSYRVGGATYDDVLNDLMDDCPPAGFIREHLRRLKEEEFSDWQDVRKRLRL*
Ga0134069_100617513300017654Grasslands SoilMPTTTIPVKRETWARLRSYKVGGATYDDVLNDLMDDRPPAGFIREHLRRLKEEAFSDWEDVRKRLRL
Ga0134074_102372523300017657Grasslands SoilMPTTTVPVKPETLARLRSNRVGGATYDDVLNELMDDRPPVGFIREHLRLLKEEEFSDWKDVRKRLRL
Ga0134074_120612513300017657Grasslands SoilMPTTTIPVKRETWARLRSYRVGGATYDDVLNDLMDDCPPAGFIREHLRRLKEEEFSDWQDVRKRLRL
Ga0134083_1052128323300017659Grasslands SoilRETWARLRSYKVGGATYDDVLNDLMDDCPPAGFIREHLRRLKEEEFSDWQDVRKRLRL
Ga0066655_1002705033300018431Grasslands SoilMMLIGMPTTTIPVKRETWARLRSYRVGGATYDDVLNDLMDDCPPAGFIREHLRRLKEEEFSDWQDVRKRLRL
Ga0066655_1043338813300018431Grasslands SoilMPTTTVPVKPETLARLRSYRVGGATYDDVLNELMDDRPPVGFIREHLRLLKEEEFSDWKDVRKRLRL
Ga0066655_1096964723300018431Grasslands SoilMMVVIVTMMATTTVPVKPATLRRLRSYKIGGTTYDEVLNDLMDDNPPVAFIREHLRRLREEPDTPWREVRKRLRL
Ga0066667_1017724423300018433Grasslands SoilMMLIVMPTTTIPVKRETWARLRSYKVGGATYDDVLNDLMDDRPPAGFIREHLRRLKEEAFSDWEDVRKRLRL
Ga0066667_1055086423300018433Grasslands SoilLHHRATAINTINLMMLIVMPTTTIPVKRETWARLRAYKVGGATYDDVLNDLMDDRPPAGFVREHLRRLKEEEFSAWEDVRKRLRL
Ga0066662_1044353733300018468Grasslands SoilMPTTTVPVKPETLARLRSYKVGGATYDDVLNELMDDRPPVGFIREHLRRLKEEEFSDWKDVRKRLRL
Ga0066662_1090094713300018468Grasslands SoilMSTTTVPVKPETLARLRAYKVGGATYDDVLNELMDDRPPVGFIREHLRRLKEEEFSDWKVVRKRLRL
Ga0066669_1106675413300018482Grasslands SoilMLIGMPTTTIPVKRETWARLRSYRVGGATYDDVLNDLMDDCPPAGFIREHLRRLKEEEFSDW
Ga0209322_1015242913300025146SoilRIPGQTINTIKFMVLMVMSTTTIPVKPETLARLRAYKLGGSTYDDVLNDLMDDRPPAGFIREHLRRLKEEEFSDWKDVRKRLRL
Ga0209619_1000597983300025159SoilMATTTVPVKPETLSKLRAYKVGGATYDDVLNEFMDEQPPEAFIREHLRRLKEDTFEDWTSVRKRLRL
Ga0209619_1000990433300025159SoilMSTTTIPVKPETLARLRAYKLGGSTYDDVLNDLMDDRPPAGFIREHLRRLKEEEFSDWKDVRKRLRL
Ga0209109_1041944323300025160SoilGSRIPGQTINTIKFMILMVMSTTTIPVKPETLARLRAYKLGGSTYDDVLNDLMDDRPPAGFIREHLRRLKEEEFSDWKDVRKRLRL
Ga0209521_1023814833300025164SoilMATTTVPVKRETLKRLRLYKVGGTTYDEVLNDFMDDNPPDAFVREHLRRLREEPDVPWREVRKRLRL
Ga0209642_1001666863300025167SoilMILMVMSTTTIPVKPETLARLRAYKLGGSTYDDVLNDLMDDRPPAGFIREHLRRLKEEEFSDWKDVRKRLRL
Ga0209324_1001891233300025174SoilMVLMVMSTTTIPVKPETLARLRAYKLGGSTYDDVLNDLMDDRPPAGFIREHLRRLKEEEFSDWKDVRKRLRL
Ga0209321_1000935173300025312SoilMVMSTTTIPVKPETLARLRAYKLGGSTYDDVLNDLMDDRPPAGFIREHLRRLKEEEFSDWKDVRKRLRL
Ga0209321_1023585813300025312SoilLELQGEAISTIKLMMLIVMATTTIPVKPETLARLRVYKVGGSTYDDVLNDLMDDRPPAGFIREHLRRLKEEEFSDWKDVRKRLRL
Ga0209520_1025388223300025319SoilMMLIVMATTTIPVKPETLARLRVYKVGGSTYDDVLNDLMDDRPPAGFIREHLRRLKEEEFSDWKDVRKRLRL
Ga0209342_1080823323300025326SoilEAISTIKLMMLIVMATTTIPVKPETLARLRVYKVGGSTYDDVLNDLMDDRPPAGFIREHLRRLKEEEFSDWKDVRKRLRL
Ga0209751_1113061923300025327SoilINTIKFMILMVMSTTTIPVKPETLARLRAYKLGGSTYDDVLNDLMDDRPPAGFIREHLRRLKEEEFSDWKDVRKRLRL
Ga0209350_100401543300026277Grasslands SoilMPTTTVPVKPETLARLRSNRVGGATYDDVLNELMDDRPPMGFIREHLRLLKEEEFSDWKDVRKRLRL
Ga0209234_100298243300026295Grasslands SoilMPTTTVPVKPETLARLRSYRVGGATYDDVLNELMDDRPPVGFIREHLRLLKDEEFSDWKDVRKRLRL
Ga0209235_121750623300026296Grasslands SoilMPTTTVPVKPETLARLRSYKVGGATYDDVLNELMDDRPPVGFIREHLRRLKEEEFSDWKD
Ga0209237_125126113300026297Grasslands SoilMRTALTINMMVVIVMMMATTTVPVKPATLRRLRSYKIGGTTYDEVLNDLMDDNPPVAFIREHLRRLREEPDIPWDEVRKRLRL
Ga0209238_106599233300026301Grasslands SoilMPTTTVPVKPETLARLRSNRVGGATYDDVLNELMDDRPPVGFIREHLRRLKEEEFSDWKDVRKR
Ga0209055_102416833300026309SoilMMLMVMPTTTIPMKRETKARLRSYKVGGATYDDVLNDLMDDRPPAGFIRKHLQSLKEEEFSDWEDVRKRLRL
Ga0209686_100229433300026315SoilLHHRATTVNTINLMMLIGMPTTTIPVKRETWARLRSYRVGGATYDDVLNDLMDDCPPAGFIREHLRRLKEEEFSDWQDVRKRLRL
Ga0209152_1003805113300026325SoilMLMVMPTTTIPMKRETKARLRSYKVGGATYDDVLNDLMDDRPPAGFIRKHLQSLTEEEFSDWED
Ga0209803_100368143300026332SoilVKPETRARLRSNRVGGATYDDVLNELMDDRPPMGFIREHLRLLKEEEFSDWKDVRKRLRL
Ga0209158_100071443300026333SoilMMLMVMPTTTIPMKRKTKARLRSYEVGGATYDDVLNDLMDDRPPAGFIRKHLQSLKEEEFSDWEDVRKRLRL
Ga0209690_111485213300026524SoilVKPETRARLRSYRVGGATYDDVLNELMDDRPPVGFIREHLRLLKEEEFSDWKDVRKRLRL
Ga0209690_119553723300026524SoilMMLIVMPTTTIPVKRETWARLRSYKVGGATYDDVLNDLMDDRPPAGFIRKHLQRLKEEEFSDWEDVRKRLRL
Ga0209160_104832243300026532SoilIPMKRKTKARLRSYEVGGATYDDVLNDLMDDRPPAGFIRKHLQSLKEEEFSDWEDVRKRLRL
Ga0209157_108865213300026537SoilMPTTTIPVKRETWARLRSYKVGGATYDDVLNDLMDDRPPAGFIREHLRRLKEEAFSDWE
Ga0209056_1000523463300026538SoilMMLMVMSTTTIPVKPETLARLRSYKVGGSTYDDVLNDLMDDRPPAGFIREHLRRLKEEEFSDWKDVRKRLRL
Ga0209056_1006508723300026538SoilMPTTTVPVKPETLARLRSYRVGGATYDDVLNELMDDRPPVGFIREHLRLLKEEKFSDWKDVRKRLRL
Ga0209161_1016268613300026548SoilMLMVMSTTTIPVKPETLARLRSYKVGGSTYDDVLNDLMDDRPPAGFIREHLRRLKEEEFSDWKDVRKRLRL
Ga0209898_102735213300027068Groundwater SandMMLIAMATTTIPVKPETLARLRVYKVGGSTYDDVLNDLMDDRPPGGFIREHLRRLKEEEFSDWKDVRKRLRL
Ga0209897_104201023300027169Groundwater SandLMMLIAMVTTTIPVKPETLARLRVYKVGGSTYDDVLNDLMDDRPPGGFIREHLRRLKEEEFSDWKDVRKRLRL
Ga0209845_102927623300027324Groundwater SandMRAALTISMMVVIMMMMATTTVPVKPQTLRRLRSYKIGGTTYDEVLNDLMDDNPPGPFVREHLRRLREEPDIPWGEVRKRLRL
Ga0209861_105450023300027332Groundwater SandALTISMMVVIMMMMATTTVPVKPQTLRRLRSYKIGGTTYDEVLNDLMDDNPPGPFVREHLRRLREEPDIPWGEVRKRLRL
Ga0209180_1024458723300027846Vadose Zone SoilMTTTTVPVKPETLARLRAYKVGGSTYDDVLNDLMDERPPMGFIQEHLRRLKEEPFEDWKDVRKRLRL
Ga0209701_1009414323300027862Vadose Zone SoilMLIVMTTTTVPVKPETLARLRAYKVGGSTYDDVLNDLMDERPPMGFIQEHLRRLKEEPFEDWKDVRKRLRL
Ga0137415_1022925823300028536Vadose Zone SoilMPTTTVPVKPETLARLRSYKVGGATYDDVLNELMDDRPPVGFIREHLRRLKEEEFADWKDVRKRLRL
Ga0137415_1082670833300028536Vadose Zone SoilMRATLTINMMVVIMMMMATTTVPVKPQTLRRLRSYKIGGTTYDEVLNDLMDDNPPGPFVREHLRRLREEPDIPWGEVRKRLRL
Ga0247727_1048635323300031576BiofilmMATTTVPVKPETLSKLRAYKVGGATYDDVLNEFMDDSPPDAFVREHLWRLREEPDVSWRAVRKRLRL
(restricted) Ga0315310_1042968923300031876SedimentTVPVKPETLLKLRAYKVGGATYDDVLNEFMDEHPPEAFIREHLRRLKEDMFEDWTSVRKRLRL
(restricted) Ga0315314_101077263300031877SedimentMAQSSAFEGGATSTINLMMPIAMATTKTPVKPETLARLRAYKLGGSTYDDVLNDLMDNRPPAGFIREHLRRLKEEEFSDWKDVRRRLRL
Ga0373902_185446_111_3413300034099Sediment SlurryMMVMIVVMMATTTTVPVKPQTLRRLRSYKVGGTTYDEVLNDLMDDNPPGTFIREHLRRLREEPDIPWSEVRKRLRL

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.