NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F058894

Metagenome / Metatranscriptome Family F058894

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F058894
Family Type Metagenome / Metatranscriptome
Number of Sequences 134
Average Sequence Length 53 residues
Representative Sequence WSKFAGNFGAGLEYRFGRVGVRAEGRDYVYKFDRYGFDKTQHDIAWQGGLTLSF
Number of Associated Samples 103
Number of Associated Scaffolds 134

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 4.48 %
% of genes near scaffold ends (potentially truncated) 95.52 %
% of genes from short scaffolds (< 2000 bps) 88.06 %
Associated GOLD sequencing projects 93
AlphaFold2 3D model prediction Yes
3D model pTM-score0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (94.030 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(28.358 % of family members)
Environment Ontology (ENVO) Unclassified
(64.925 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(67.910 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 51.22%    Coil/Unstructured: 48.78%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.40
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 134 Family Scaffolds
PF13533Biotin_lipoyl_2 11.19
PF00529CusB_dom_1 9.70
PF02077SURF4 6.72
PF07681DoxX 6.72
PF08241Methyltransf_11 5.97
PF01047MarR 5.22
PF05175MTS 3.73
PF00873ACR_tran 2.99
PF12802MarR_2 2.24
PF13460NAD_binding_10 2.24
PF10604Polyketide_cyc2 2.24
PF16576HlyD_D23 1.49
PF12697Abhydrolase_6 1.49
PF00106adh_short 0.75
PF05368NmrA 0.75
PF08281Sigma70_r4_2 0.75
PF08242Methyltransf_12 0.75
PF01120Alpha_L_fucos 0.75
PF02321OEP 0.75
PF13936HTH_38 0.75
PF06727DUF1207 0.75
PF00291PALP 0.75
PF01728FtsJ 0.75
PF13193AMP-binding_C 0.75

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 134 Family Scaffolds
COG2259Uncharacterized membrane protein YphA, DoxX/SURF4 familyFunction unknown [S] 13.43
COG4270Uncharacterized membrane proteinFunction unknown [S] 6.72
COG1538Outer membrane protein TolCCell wall/membrane/envelope biogenesis [M] 1.49
COG029323S rRNA U2552 (ribose-2'-O)-methylase RlmE/FtsJTranslation, ribosomal structure and biogenesis [J] 0.75
COG1189Predicted rRNA methylase YqxC, contains S4 and FtsJ domainsTranslation, ribosomal structure and biogenesis [J] 0.75
COG3669Alpha-L-fucosidaseCarbohydrate transport and metabolism [G] 0.75

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms94.03 %
UnclassifiedrootN/A5.97 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002560|JGI25383J37093_10055979All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1259Open in IMG/M
3300002561|JGI25384J37096_10057771All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1455Open in IMG/M
3300002916|JGI25389J43894_1096159All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium531Open in IMG/M
3300005167|Ga0066672_10570268All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes733Open in IMG/M
3300005171|Ga0066677_10298838All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium920Open in IMG/M
3300005172|Ga0066683_10181154All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1299Open in IMG/M
3300005174|Ga0066680_10613356All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium680Open in IMG/M
3300005176|Ga0066679_10457978All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium834Open in IMG/M
3300005179|Ga0066684_10060113All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium2213Open in IMG/M
3300005180|Ga0066685_11055833Not Available533Open in IMG/M
3300005436|Ga0070713_100527272All Organisms → cellular organisms → Bacteria1117Open in IMG/M
3300005445|Ga0070708_100008290All Organisms → cellular organisms → Bacteria8345Open in IMG/M
3300005446|Ga0066686_10158519All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1500Open in IMG/M
3300005446|Ga0066686_10172161All Organisms → cellular organisms → Bacteria1441Open in IMG/M
3300005446|Ga0066686_10833969All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium611Open in IMG/M
3300005450|Ga0066682_10098087All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1837Open in IMG/M
3300005450|Ga0066682_10606270All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes687Open in IMG/M
3300005467|Ga0070706_100529202All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1096Open in IMG/M
3300005467|Ga0070706_101012427Not Available766Open in IMG/M
3300005518|Ga0070699_101057648All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium744Open in IMG/M
3300005536|Ga0070697_101020686All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium735Open in IMG/M
3300005552|Ga0066701_10046226All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium2366Open in IMG/M
3300005552|Ga0066701_10334709All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium938Open in IMG/M
3300005552|Ga0066701_10692360All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes613Open in IMG/M
3300005555|Ga0066692_10797789All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium581Open in IMG/M
3300005556|Ga0066707_10977592All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium517Open in IMG/M
3300005557|Ga0066704_10231520All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1253Open in IMG/M
3300005558|Ga0066698_10697106All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium670Open in IMG/M
3300005559|Ga0066700_10314690All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1104Open in IMG/M
3300005561|Ga0066699_10325448All Organisms → cellular organisms → Bacteria1097Open in IMG/M
3300005575|Ga0066702_10110699All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1583Open in IMG/M
3300005586|Ga0066691_10841189All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes540Open in IMG/M
3300006031|Ga0066651_10314027All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes840Open in IMG/M
3300006032|Ga0066696_10098226All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1754Open in IMG/M
3300006034|Ga0066656_10213583All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1231Open in IMG/M
3300006755|Ga0079222_11940858All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes576Open in IMG/M
3300006791|Ga0066653_10037981All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1942Open in IMG/M
3300006852|Ga0075433_11642336All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium554Open in IMG/M
3300006903|Ga0075426_11108056Not Available599Open in IMG/M
3300007258|Ga0099793_10421700All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium657Open in IMG/M
3300009012|Ga0066710_101461257All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1057Open in IMG/M
3300009012|Ga0066710_102049583All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes845Open in IMG/M
3300009012|Ga0066710_103886438All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium560Open in IMG/M
3300009038|Ga0099829_10533066All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium975Open in IMG/M
3300009038|Ga0099829_11254032All Organisms → cellular organisms → Bacteria613Open in IMG/M
3300009088|Ga0099830_11724636All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium523Open in IMG/M
3300009090|Ga0099827_10120361All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium2114Open in IMG/M
3300009137|Ga0066709_104275027All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium521Open in IMG/M
3300010099|Ga0127450_1023117All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes503Open in IMG/M
3300010107|Ga0127494_1093562All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium676Open in IMG/M
3300010142|Ga0127483_1193824Not Available672Open in IMG/M
3300010301|Ga0134070_10276923All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium634Open in IMG/M
3300010301|Ga0134070_10405989All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium538Open in IMG/M
3300010304|Ga0134088_10197684All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium962Open in IMG/M
3300010320|Ga0134109_10056120All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1313Open in IMG/M
3300010323|Ga0134086_10138609All Organisms → cellular organisms → Bacteria882Open in IMG/M
3300010325|Ga0134064_10100844All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes950Open in IMG/M
3300010326|Ga0134065_10151584Not Available810Open in IMG/M
3300010329|Ga0134111_10487374All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes539Open in IMG/M
3300010333|Ga0134080_10179998All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium908Open in IMG/M
3300010333|Ga0134080_10203237All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes859Open in IMG/M
3300010333|Ga0134080_10262127All Organisms → cellular organisms → Bacteria765Open in IMG/M
3300010333|Ga0134080_10417432All Organisms → cellular organisms → Bacteria623Open in IMG/M
3300010333|Ga0134080_10584755All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium541Open in IMG/M
3300010333|Ga0134080_10670990All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes511Open in IMG/M
3300010335|Ga0134063_10418072All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium660Open in IMG/M
3300010335|Ga0134063_10545746All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_66_11585Open in IMG/M
3300010362|Ga0126377_10456437All Organisms → cellular organisms → Bacteria1301Open in IMG/M
3300010362|Ga0126377_11819601All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium684Open in IMG/M
3300010905|Ga0138112_1094313All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium779Open in IMG/M
3300012200|Ga0137382_10030862All Organisms → cellular organisms → Bacteria3200Open in IMG/M
3300012200|Ga0137382_10072320All Organisms → cellular organisms → Bacteria2214Open in IMG/M
3300012201|Ga0137365_10204034All Organisms → cellular organisms → Bacteria1477Open in IMG/M
3300012201|Ga0137365_11033852All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes595Open in IMG/M
3300012203|Ga0137399_10957344All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium721Open in IMG/M
3300012203|Ga0137399_11792241All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium502Open in IMG/M
3300012208|Ga0137376_10541959All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1008Open in IMG/M
3300012211|Ga0137377_10065775All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis3385Open in IMG/M
3300012355|Ga0137369_10708153Not Available692Open in IMG/M
3300012356|Ga0137371_11208785All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_66_11564Open in IMG/M
3300012359|Ga0137385_10948901All Organisms → cellular organisms → Bacteria710Open in IMG/M
3300012361|Ga0137360_10199363All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1619Open in IMG/M
3300012361|Ga0137360_11403255All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium601Open in IMG/M
3300012363|Ga0137390_10019748All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis6224Open in IMG/M
3300012403|Ga0134049_1074812All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1578Open in IMG/M
3300012922|Ga0137394_11452435All Organisms → cellular organisms → Bacteria545Open in IMG/M
3300012925|Ga0137419_10480475All Organisms → cellular organisms → Bacteria984Open in IMG/M
3300012927|Ga0137416_10199790All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1603Open in IMG/M
3300012927|Ga0137416_11303266All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium656Open in IMG/M
3300012927|Ga0137416_11962806All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium536Open in IMG/M
3300012929|Ga0137404_11714945All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium583Open in IMG/M
3300012930|Ga0137407_11831393All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes579Open in IMG/M
3300012930|Ga0137407_12338382All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium511Open in IMG/M
3300012944|Ga0137410_12114133All Organisms → cellular organisms → Bacteria502Open in IMG/M
3300012976|Ga0134076_10222346All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes798Open in IMG/M
3300014154|Ga0134075_10101990All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1212Open in IMG/M
3300014157|Ga0134078_10018961All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis2139Open in IMG/M
3300015054|Ga0137420_1309371All Organisms → cellular organisms → Bacteria876Open in IMG/M
3300015359|Ga0134085_10094113All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1239Open in IMG/M
3300017654|Ga0134069_1093332All Organisms → cellular organisms → Bacteria977Open in IMG/M
3300017654|Ga0134069_1282337All Organisms → cellular organisms → Bacteria584Open in IMG/M
3300017659|Ga0134083_10003181All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes5058Open in IMG/M
3300018078|Ga0184612_10037141All Organisms → cellular organisms → Bacteria2529Open in IMG/M
3300018433|Ga0066667_10203693All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1457Open in IMG/M
3300018433|Ga0066667_10840812All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes785Open in IMG/M
3300018468|Ga0066662_10088787All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis2144Open in IMG/M
3300018482|Ga0066669_10537879Not Available1016Open in IMG/M
3300025910|Ga0207684_11356889All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes583Open in IMG/M
3300026277|Ga0209350_1012219All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis2745Open in IMG/M
3300026277|Ga0209350_1038586All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1406Open in IMG/M
3300026297|Ga0209237_1064762All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis1749Open in IMG/M
3300026298|Ga0209236_1166740All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium902Open in IMG/M
3300026298|Ga0209236_1251028All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes584Open in IMG/M
3300026301|Ga0209238_1083447All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1107Open in IMG/M
3300026306|Ga0209468_1034216All Organisms → cellular organisms → Bacteria1764Open in IMG/M
3300026307|Ga0209469_1100118All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_66_11800Open in IMG/M
3300026310|Ga0209239_1001256All Organisms → cellular organisms → Bacteria14999Open in IMG/M
3300026310|Ga0209239_1115623All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1119Open in IMG/M
3300026310|Ga0209239_1232877All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes640Open in IMG/M
3300026314|Ga0209268_1140356All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes595Open in IMG/M
3300026319|Ga0209647_1205384All Organisms → cellular organisms → Bacteria681Open in IMG/M
3300026328|Ga0209802_1229146All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium670Open in IMG/M
3300026331|Ga0209267_1076705All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1451Open in IMG/M
3300026333|Ga0209158_1117762All Organisms → cellular organisms → Bacteria997Open in IMG/M
3300026527|Ga0209059_1141937All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes885Open in IMG/M
3300026540|Ga0209376_1193642All Organisms → cellular organisms → Bacteria931Open in IMG/M
3300026542|Ga0209805_1055046All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae1971Open in IMG/M
3300026548|Ga0209161_10008603All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis7828Open in IMG/M
3300026548|Ga0209161_10476097All Organisms → cellular organisms → Bacteria551Open in IMG/M
3300026557|Ga0179587_10372288All Organisms → cellular organisms → Bacteria929Open in IMG/M
3300027748|Ga0209689_1231840All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium780Open in IMG/M
3300027875|Ga0209283_10842626All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes560Open in IMG/M
3300032180|Ga0307471_102721492Not Available627Open in IMG/M
3300033407|Ga0214472_10010756All Organisms → cellular organisms → Bacteria9513Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil28.36%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil23.13%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil20.90%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil15.67%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere5.22%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil1.49%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.49%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.75%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.75%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.75%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil0.75%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.75%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cmEnvironmentalOpen in IMG/M
3300002561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cmEnvironmentalOpen in IMG/M
3300002916Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cmEnvironmentalOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005171Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126EnvironmentalOpen in IMG/M
3300005172Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132EnvironmentalOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005176Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128EnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150EnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005556Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156EnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005575Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151EnvironmentalOpen in IMG/M
3300005586Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140EnvironmentalOpen in IMG/M
3300006031Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100EnvironmentalOpen in IMG/M
3300006032Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145EnvironmentalOpen in IMG/M
3300006034Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105EnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006791Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102EnvironmentalOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300010099Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_16_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010107Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_8_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010142Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_4_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015EnvironmentalOpen in IMG/M
3300010304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015EnvironmentalOpen in IMG/M
3300010320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015EnvironmentalOpen in IMG/M
3300010323Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaGEnvironmentalOpen in IMG/M
3300010326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015EnvironmentalOpen in IMG/M
3300010333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010905Grasslands soil microbial communities from Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_8_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012355Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012403Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012976Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300014154Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015EnvironmentalOpen in IMG/M
3300014157Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300015054Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015359Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015EnvironmentalOpen in IMG/M
3300017654Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300017659Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300018078Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coexEnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026277Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026297Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026298Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026306Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)EnvironmentalOpen in IMG/M
3300026307Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)EnvironmentalOpen in IMG/M
3300026310Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026314Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)EnvironmentalOpen in IMG/M
3300026319Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)EnvironmentalOpen in IMG/M
3300026328Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)EnvironmentalOpen in IMG/M
3300026331Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)EnvironmentalOpen in IMG/M
3300026333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)EnvironmentalOpen in IMG/M
3300026527Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)EnvironmentalOpen in IMG/M
3300026540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)EnvironmentalOpen in IMG/M
3300026542Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)EnvironmentalOpen in IMG/M
3300026548Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)EnvironmentalOpen in IMG/M
3300026557Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungalEnvironmentalOpen in IMG/M
3300027748Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)EnvironmentalOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300033407Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI25383J37093_1005597933300002560Grasslands SoilTWTKFAGNFGAGVEYRFGRVGVRAEGRDYVYKFDRYGFDRTQHDIAWQGGVTVSF*
JGI25384J37096_1005777123300002561Grasslands SoilGSDSTWSKFAGNYGVGFEYRFRHVGVRAEGRDFVYKFDRYGFDKTQHDIAWQGGLTLSF*
JGI25389J43894_109615913300002916Grasslands SoilSKFAGNFGAGLEYRFGRVGLRAEGRDFVYKFDRYGFDKTQHDIAWQGGVTLSF*
Ga0066672_1057026813300005167SoilWSKFAGNFGAGLEYRFGRVGIRAEGRDFVYTFDRYGFDKTQHDVAWQGGLTLSF*
Ga0066677_1029883813300005171SoilQLGSDSTWSKFAGNYGVGFEYRFRRVGVRAEGRDFVYKFDRYGFDKTQHDIAWQGGLTLSF*
Ga0066683_1018115413300005172SoilTWSKFAGNFGAGLEYRFGRVGVRAEGRDYVYKFDRYGFDKTQHDIAWQGGLTLSF*
Ga0066680_1061335613300005174SoilADSTWTKFAGNFGAGLEYRFGGVGIRAEGRDYVYKFDRYGFDKTQHDIAWQGGVTVSF*
Ga0066679_1045797813300005176SoilWSKFAGNFGAGLEYRFGRLGIRAEGRDFVYKFDRYGFDKTQHDIAWQGGVTLSF*
Ga0066684_1006011333300005179SoilTWSKFAGNFGAGLEYRFGRVGVRAEGRDYVYTFDRYGFDKTQHDIAWQGGLTLSF*
Ga0066685_1105583323300005180SoilGNFGAGLEYRFGRAGIRAEARDNVYKLDRYGFDKTQHDIVWQGGVTLSF*
Ga0070713_10052727233300005436Corn, Switchgrass And Miscanthus RhizosphereQLGATDSWSKFAGNFGAGLEYRFGQVGLRAEGRDVVYKFDRYGFNKTQHDIAWQGGLTLSF*
Ga0070708_10000829013300005445Corn, Switchgrass And Miscanthus RhizosphereFAGNFGAGLEYRFGQVGLRAEGRDFVHNFDRYGFNKTQHDIAWQGAITLSF*
Ga0066686_1015851943300005446SoilAGNFGAGIEYRFGRFGVRGEGRDYVYKFDRNGFDKTQHDVAWQGGVTVSF*
Ga0066686_1017216143300005446SoilQLESDSTWSKFAGNFGGGVEYRLGRVGIRAEGRDVVYKFDRYGFDKTQHDIAWQGGVTLSF*
Ga0066686_1083396913300005446SoilHQLESDSTWTKFAGNFGAGVEYRFGRVGVRAEGRDYIYKFDRYGFDKTQHDVAWQGGVTVSF*
Ga0066682_1009808743300005450SoilAGLEYSFGRVGVRAEGRDFIYKFDRYGFDKTQHDIAWQGGLTLSF*
Ga0066682_1060627023300005450SoilNYGVGFEYRFRRVGVRAEGRDFVYKFDRYGFDKTQHDIAWQGGLTLSF*
Ga0070706_10052920213300005467Corn, Switchgrass And Miscanthus RhizosphereAGLEYRFGAIGLRAEGRDYVYKFDRYGFNKTQHDIAWQGGLTLTF*
Ga0070706_10101242733300005467Corn, Switchgrass And Miscanthus RhizosphereYGAGIEYRFSRVGFRVEGRDYVYKFDRYGFDKTQHDIAWQGGVTVSF*
Ga0070699_10105764843300005518Corn, Switchgrass And Miscanthus RhizosphereDSDSTWSKFAGNFGAGIELRRGRVGVRAEGRDYVYKFDRYGFDKTQHDIAWQGGVTVSF*
Ga0070697_10102068623300005536Corn, Switchgrass And Miscanthus RhizosphereGNFGAGLEYRFGAIGLRAEGRDYVYKFDRYGFNKTQHDIAWQGGLTLTF*
Ga0066701_1004622633300005552SoilWSKFAGNYGVGFEYRFRHVGVRAEGRDFVYKFDRYGFDKTQHDIAWQGGLTLSF*
Ga0066701_1033470933300005552SoilMSRRFVSNLIASDTWSKFAGTFGAGLEYSFGRVGVRAEGRDFIYKFDRYGFDKTQHDIAWQGGLTLSF*
Ga0066701_1069236013300005552SoilKFAGNFGAGLEYRFGRLGIRAEGRDYVYKFDRYGFDKTQHDIAWQGGVTLSF*
Ga0066692_1079778923300005555SoilDSTWSKFAGNFGAGVEYRLGRVGIRAEGRDLVYKFDRYGFDKTQHDIAWQGGVTLSF*
Ga0066707_1097759223300005556SoilASDTWSKFAGNFGAGLEYRFGRVGIRAEGRDFVYKFDRYGFDKTQHDVAWQGGLTLSF*
Ga0066704_1023152023300005557SoilWSKFAGNFGAGLEYRFGRLGIRAEGRDFVYKFDRYGFDKIQHDIAWQGGVTVSF*
Ga0066698_1069710613300005558SoilAGLEYRFGRVGVRAEGRDYVYKFDRYGFDKTQHDIAWQGGLTLSF*
Ga0066700_1031469023300005559SoilADSTWTKFAGNFGAGLEYRFGRLGIRAEGRDYVYKFDRYGFDKTQHDIAWQGGVTLSF*
Ga0066699_1032544813300005561SoilTWSKFAGNFGAGVEYRLGRVGIRAEGRDVVYKFDRYGFDKTQHDIAWQGGVTLSF*
Ga0066702_1011069913300005575SoilFAGNFGAGLEYRFGRVGIRAEGRDLVYKFDRYGFDKTQHDIAWQGGLTLSF*
Ga0066691_1084118923300005586SoilGNYGVGLEYRFRRVGVRAEGRDFVYKFDRYGFDKTQHDIAWQGGLTLSF*
Ga0066651_1031402733300006031SoilKFAGNFGAGVEYRLGRVGIRAEGRDLVYKFDRYGFDKTQHDIAWQGGVTLSF*
Ga0066696_1009822633300006032SoilQLGSDSTWSKFAGNYGVGFEYRFRRIGVRAEGRDFVYKFDRYGFDKTQHDIAWQGGLTLSF*
Ga0066656_1021358333300006034SoilFGAGLEYRFGRVGVRAEGRDYVYKFDRYGFDKTQHDIAWQGGLTLSF*
Ga0079222_1194085823300006755Agricultural SoilTWSKFAGNFGAGLEYRFGRVGIRAEGRDFVYTFDRYGFDKTQHDIAWQGGLTLSF*
Ga0066653_1003798133300006791SoilGGNFGAGVEYRFGRWGVRAEGRDYVYTFDRYGFDKTQHDIAWQGGITLSF*
Ga0075433_1164233613300006852Populus RhizosphereGNFGAGVEYRFGRLGVRAEGRDYVYKFDRYGFDRTQHDIAWEGGVTLSF*
Ga0075426_1110805623300006903Populus RhizosphereDASDTWSKFAGNFGAGLEYRFGQVGLRAEGRDFVYKFDRYGFNKTQHDIAWQGGLTLSF*
Ga0099793_1042170013300007258Vadose Zone SoilNFGAGLEYRFGRVGIRAEGRDFVYKFDRYGFDKTQHDVAWQGGLTLSF*
Ga0066710_10146125723300009012Grasslands SoilGAGLEYRFGRVGVRAEGRDYVYKFDRYGFDKTQHDIAWQGGLTLSF
Ga0066710_10204958323300009012Grasslands SoilGSDSTWSKFAGNYGVGFEYRFRRIGVRAEGRDFVYKFDRYGFDKTQHDIAWQGGLTLSF
Ga0066710_10388643823300009012Grasslands SoilGAGLEYRFGRVGIRAEGRDFVYTFDRYGFDKTQHDVAWQGGLTLSF
Ga0099829_1053306623300009038Vadose Zone SoilNFGAGLEYRVGRIGLRAEGRDFVYKFDRYGFDKTQHDIAWQGGLTLTF*
Ga0099829_1125403223300009038Vadose Zone SoilHQLGSDSTWSKFAGNFGAGVEYRFGRIGVRAEGRDFVYKFDRYGFDKTQHDIAWQAGVTVSF*
Ga0099830_1172463613300009088Vadose Zone SoilLEYRFGQVGIRAEGRDFVYNFDRYGFNKTQHDIAWQGGVTLTF*
Ga0099827_1012036133300009090Vadose Zone SoilGADSTWSKFAGNFGAGLEYRFGRLGIRAEGRDFVYKFDRYGFDKTQHDIAWQGGVTVSF*
Ga0066709_10427502713300009137Grasslands SoilGGGIEYRFGRLGVRAEGRDYVYKFDRYGFDKTQHDIAWQGGVTVSF*
Ga0127450_102311713300010099Grasslands SoilVDQVRGQRRRGGLEYRFGRWGIRAEGRDYVYKFDRYGFDKTQHDIAWQGGVTLSF*
Ga0127494_109356223300010107Grasslands SoilSDSTWSKFAGNFGGGVEYRLGRVGIRAEGRDVVYKFDRYGFDKTQHDIAWQGGVTLSF*
Ga0127483_119382413300010142Grasslands SoilSDSTWTKFAGNFGGGIEYRFGRLGVRAEGRDYVYKFDRYGFDKTQHDIAWQGGVTVSF*
Ga0134070_1027692323300010301Grasslands SoilWTKFAGNFGAGIEYRFSRIGVRAEARDYVYKFDRYGYDKTQHDVAWQGGVTLSF*
Ga0134070_1040598913300010301Grasslands SoilGNFGAGVEYRFGRLGVRAEGRDYVYKFDRFGFDKTQHDIAWQGGVSLSF*
Ga0134088_1019768413300010304Grasslands SoilWSKFAGNFGAGLEYRFGRVGVRAEGRDYVYKFDRYGFDKTQHDIAWQGGLTLSF*
Ga0134109_1005612023300010320Grasslands SoilAGNYGVGFEYRFRRIGVRAEGRDFVYKFDRYGFDKTQHDIAWQGGLTLSF*
Ga0134086_1013860923300010323Grasslands SoilWSKFAGNFGAGVEYRFGRIGVRAEGRDFVYKFDRYGFDKTQHDIAWQGGVTVSF*
Ga0134064_1010084413300010325Grasslands SoilPDSTWTKFAGNFGAGLEYPFGRFGVRAEGRDYVYKFDRNGFDKTQHDVAWQGGVTVSF*
Ga0134065_1015158433300010326Grasslands SoilEYRFGRLGVRAEGRDYVYKFDRYGFDKTQHDVAWQGGVTVSF*
Ga0134111_1048737423300010329Grasslands SoilSDSTWCKFAGNYGVGFEYRFRRIGVRAEGRDFVYKFDRYGFDKTQHDIAWQGGLTLSF*
Ga0134080_1017999823300010333Grasslands SoilEASDTWSKFAGNFGAGLKYRFGRVGIRAEGRDFVYKFDRYGFDKTQHDIAWQGGLTLTF*
Ga0134080_1020323733300010333Grasslands SoilFAGNFGAGLEYRFGRAGVRAEARDNVYKLDRYGFGKTQHDIAWQGGVTLSF*
Ga0134080_1026212723300010333Grasslands SoilSDSTWSKFAGNFGAGVEYRLGRVGIRAEGRDLVYKFDRYGFDKTQHDIAWQGGVTLSF*
Ga0134080_1041743223300010333Grasslands SoilLEYRFGRWGIRAEGRDYVYKFDRYGFDKTQHDIAWQGGVTLSF*
Ga0134080_1058475513300010333Grasslands SoilKFGGNVGAGFEYRFGRWGVRAEGRDYVYKFDRYGFDKTQHEVAWQGGVTVSF*
Ga0134080_1067099023300010333Grasslands SoilQLGSDSTWSKFAGNYGVGFEYRFRHVGVRAEGRDFVYKFDRYGFDKTQHDIAWQGGLTLSF*
Ga0134063_1041807213300010335Grasslands SoilTWSKFAGNFGAGLEYRFGRVGIRAEGRDFVYKFDRYGFDKTQHDIAWQGGLTLTF*
Ga0134063_1054574613300010335Grasslands SoilTWTKFAGNFGAGLEYRFGRFGVRAEGRDYVYKFDRNGFDKTQHDVAWQGGVTVSF*
Ga0126377_1045643743300010362Tropical Forest SoilAGVEYRFGRVGLRAEGRDYVYTFDRYGFNKTQHDIAWEGGVTLSF*
Ga0126377_1181960133300010362Tropical Forest SoilAGVEYRFGRVGLRAEGRDYVYTFDRYGFNKTQHDIAWEGGVTVSF*
Ga0138112_109431323300010905Grasslands SoilGAGVEYRLGRVGIRAEGRDLVYKFDRYGFDKTQHDIAWQGGVTLSF*
Ga0137382_1003086213300012200Vadose Zone SoilKFAGNFGGGIEYRFGRLGVRAEGRDYVYKFDRYGFDKTQHDIAWQGGVTVSF*
Ga0137382_1007232043300012200Vadose Zone SoilNFGGGIEYRFGRLGVRAEGRDYVYKFDRYGFDKTQHDIAWQGGVTVSF*
Ga0137365_1020403453300012201Vadose Zone SoilWSKFAGNFGAGVEYRLGRVGIRAEGRDVVYKFDRYGFDKTQHDIAWQGGVTLSF*
Ga0137365_1103385213300012201Vadose Zone SoilKFAGNYGVGFEYRFRHVGVRAEGRDFVYKFDRYGFDKTQHDIAWQGGLTLSF*
Ga0137399_1095734423300012203Vadose Zone SoilGADSTWTKFAGNFGAGLEYRFGRLGIRAEGRDYVYKFDRYGFDKTQHDIAWQGGVTVSF*
Ga0137399_1179224113300012203Vadose Zone SoilNFGAGLEYRFGRVGIRAEGRDFVYKFDRYGFDKTQHDVAWQGGLTLTF*
Ga0137376_1054195923300012208Vadose Zone SoilGLEYRFGRVGIRAEGRDFVYKFDRYGFDKTQHDIAWQGGLTLTF*
Ga0137377_1006577513300012211Vadose Zone SoilLESDSTWSKFAGNFGAGVEYRFGRWGVRAEGRDYVYTFDRYGFDKTQHDIAWQGGITLSF
Ga0137369_1070815313300012355Vadose Zone SoilTWSKFTGNFGAGLEYRFGRVGVRAEGRDYVYTFDRYGFDKTQHDIAWQGGVTLSF*
Ga0137371_1120878523300012356Vadose Zone SoilAGNFGAGLEYRFGRVGVRAEGRDFVYKFDRNGFDKTQHDVAWQGGVTVSF*
Ga0137385_1094890113300012359Vadose Zone SoilSTWTKFAGNVGAGVEYRFGRVGLRAEGRDYIYKFDRYGFDKTQHDIAWQGGVSLSF*
Ga0137360_1019936323300012361Vadose Zone SoilWSKFAGNFGAGLEYRFGRVGIRAEGRDFVYKFDRYGFDKTQHDVAWQGGLTLTF*
Ga0137360_1140325523300012361Vadose Zone SoilWSKFAGNFGAGLEYRFGRVGIRAEGRDFVYKFDRYGFDKTQHDVAWQGGLTLSF*
Ga0137390_1001974813300012363Vadose Zone SoilAGNFGAGLEYRFGQVGIRAEGRDFVYNFDRYGFNKTQHDIAWQGGVTLTF*
Ga0134049_107481213300012403Grasslands SoilSTWSKFAGNFGAGVEYRLGRVGIRAEGRDLVYKFDRYGFDKTQHDIAWQGGVTLSF*
Ga0137394_1145243523300012922Vadose Zone SoilGAGVEYRFGRIGLRAEGRDYIYKFDRYGFDKTQHDIAWQGGVTVSF*
Ga0137419_1048047513300012925Vadose Zone SoilGRWGIRAEGRDYVYKFDRLGFDRTQHDIAWQGGITASF*
Ga0137416_1019979043300012927Vadose Zone SoilWTKFAGNFGAGLEYRFGRFGVRAEGRDYVYKFDRYGFDKTQHDVAWQGGVTVSF*
Ga0137416_1130326613300012927Vadose Zone SoilLHQLGSDSTWSKFAGNYGVGLEYRFRRVGVRAEGRDFVYKFDRYGFDKTQHDIAWQGGLTLSF*
Ga0137416_1196280613300012927Vadose Zone SoilTWSKFAGNFGAGLEYRFGRVGIRAEGRDFVYKFDRYGFDKTQHDVAWQGGLTLTF*
Ga0137404_1171494533300012929Vadose Zone SoilTKFAGNFGGGIEYRFGRLGVRAEGRDYVYKFDRYGFDKTQHDIAWQGGVTVSF*
Ga0137407_1183139313300012930Vadose Zone SoilSDTWSKFAGNFGAGLEYRFGQVGLRAEGRDFVYNFDRHGFNKTQHDIAWQGAITLSF*
Ga0137407_1233838213300012930Vadose Zone SoilNFGAELEYRFGRVGIRAEGRDFVYKFDRYGFDKTQHDVAWQGGLTLSF*
Ga0137410_1211413323300012944Vadose Zone SoilNVGAGVEYRFGRIGLRAEGRDYIYKFDRYGFDKTQHDIAWQGGVTVSF*
Ga0134076_1022234633300012976Grasslands SoilNFGAGIEYRFGRFGVRGEGRDYVYKFDRNGFDKTQHDVAWQGGVTVSF*
Ga0134075_1010199013300014154Grasslands SoilFGAGLEYRFGRIGLRAEGRDFVYKFDRFGFDKTQHDIAWQGGLTLTF*
Ga0134078_1001896133300014157Grasslands SoilSKFAGNYGVGFEYRFRRVGVRAEGRDFVYKFDRYGFDKTQHDIAWQGGLTLSF*
Ga0137420_130937133300015054Vadose Zone SoilEYRFRRIGLRAEGRDYIYKFDRYGFDKTQHDIAWQGGVTVSF*
Ga0134085_1009411333300015359Grasslands SoilDSDSTWTKFAGNFGAGLEYRFGRVGVRAEGRDFVYKFDRNGFDKTQHDVAWQGGVTVSF*
Ga0134069_109333213300017654Grasslands SoilAGVEYRFGRIGVRAEGRDFVYKFDRYGFDKTQHDIAWQGGVTVSF
Ga0134069_128233723300017654Grasslands SoilLEYRFGRWGIRAEGRDYVYKFDRYGFDKTQHDIAWQGGVTLSF
Ga0134083_1000318143300017659Grasslands SoilGAGLEYSFGRWGVRAEGRDYVYTFDRYGFDKTQHDIAWQGGITLSF
Ga0184612_1003714143300018078Groundwater SedimentKFAGNFGAGLEYRLGRLGVRAEGRDYVYRFDRYGFDKTQHDIAWQGGVTVTF
Ga0066667_1020369313300018433Grasslands SoilLGSVATWSKLDGNFGVGLQYRFRRVGVRAEGRDFVYKFDRYGFDKTQHDIAWQGGLTLSF
Ga0066667_1084081223300018433Grasslands SoilGSDSTWTKFAGNFGAGLEYRLGRVGVRAEGRDYVYKFDRYGFDKTQHDIAWQGGVTVSF
Ga0066662_1008878733300018468Grasslands SoilGVEYRFGRWGVRAEGRDYVYTFDRYGFDKTQHDIAWQGGITLSF
Ga0066669_1053787913300018482Grasslands SoilGIEYRFGRLGVRAEGRDYVYKFDRYGFDKTQHDIAWQGGVTVSF
Ga0207684_1135688933300025910Corn, Switchgrass And Miscanthus RhizosphereDSDSTWTKFAGNYGAGIEYRFSRVGFRVEGRDYVYKFDRYGFDKTQHDIAWQGGVTVSF
Ga0209350_101221933300026277Grasslands SoilFGGGVEYRFGRWGVRAEGRDYVYTFDRYGFDKTQHDIAWQGGITLSF
Ga0209350_103858623300026277Grasslands SoilMSRRFVSNLIASDTWSKFAGTFGAGLEYSFGRVGVRAEGRDFIYKFDRYGFDKTQHDIAWQGGLTLSF
Ga0209237_106476233300026297Grasslands SoilAGLEYRFGRAGVRAEARDNVYKLDRYGFDKTQHDIAWQGGVTLSF
Ga0209236_116674013300026298Grasslands SoilTWTKFAGNFGAGLEYRFGRIGLRAEGRDFVYKFDRYGFDKTQHDIAWQGGLTLTF
Ga0209236_125102813300026298Grasslands SoilNFGAGLEYRFGRAGVRAEARDNVYKLDRYGFDKTQHDIAWQGGVTLSF
Ga0209238_108344713300026301Grasslands SoilKFAGNFGAGLEYRFGRVGIRAEGRDFVYKFDRYGFDKTQHDVAWQGGLTLTF
Ga0209468_103421613300026306SoilSTWTKFAGNFGGGIEYRFGRLGVRAEGRDYVYKFDRYGFDKTQHDIAWQGGVTVSF
Ga0209469_110011813300026307SoilKFAGNFGAGLEYRFGRFGVRAEGRDYVYKFDRNGFDKTQHDVAWQGGVTVSF
Ga0209239_1001256113300026310Grasslands SoilMSRRFVSNLIASDTWSKFAGNFGAGLEYSFGRVGVRAEGRDFIYKFDRYGFDKTQHDIAWQGGLTLSF
Ga0209239_111562313300026310Grasslands SoilKFAGNYGVGFEYRFRRVGVRAEGRDFVYKFDRYGFDKTQHDIAWQGGLALSF
Ga0209239_123287713300026310Grasslands SoilSTWSKFAGNFGAGVEYRFGRWGVRAEGRDYVYTFDRYGFDKTQHDIAWQGGITLSF
Ga0209268_114035623300026314SoilEYRFGRAGIRAEARDNVYKLDRYGFDKTQHDIVWQGGVTLSF
Ga0209647_120538433300026319Grasslands SoilDSTWTKFAGNFGGGIEYRFGRLGVRAEGRDYVYKFDRYGFDKTAHDIAWQGGVTVSF
Ga0209802_122914623300026328SoilWTKFAGNFGAGLEYRFGGVGIRAEGRDYVYKFDRYGFDKTQHDIAWQGGVTVSF
Ga0209267_107670513300026331SoilKFAGNFGAGVEYRLGRVGIRAEGRDLVYKFDRYGFDKTQHDIAWQGGVTLSF
Ga0209158_111776233300026333SoilGSDSTWSKFAGNFGAGVEYRFGRIGVRAEGRDFVYKFDRYGFDKTQHDIAWQGGVTVSF
Ga0209059_114193723300026527SoilHQLGSDSTWSKFAGNYGVGFEYRYRRVGVRAEGRDFVYKFDRYGFDKTQHDIAWQGGLTLSF
Ga0209376_119364213300026540SoilLESDSTWSKFAGNFGAGVEYRLGRVGIRAEGRDLVYKFDRYGFDKTQHDIAWQGGVTLSF
Ga0209805_105504633300026542SoilQLGSDSTWSKFAGNYGVGFEYRFRHVGVRAEGRDFVYKFDRYGFDKTQHDIAWQGGLTLS
Ga0209161_1000860323300026548SoilMSRRFVSNLIASDTWSKFAGNFAGLEYSFGRVGVRAEGRDFIYKFDRYGFDKTQHDIAWQGGLTLSF
Ga0209161_1047609713300026548SoilFGAGLEYRFGRVGVRAEGRDFIYTFDRYGFDKTQHDIAWQGGLTLSF
Ga0179587_1037228833300026557Vadose Zone SoilRLGRWGVRAEGRDYVYKFDRYGFDKTQHDIAWQGGVTVSF
Ga0209689_123184023300027748SoilGAGLEYRFGRLGIRAEGRDYVYKFDRYGFDKTQHDIAWQGGVTLSF
Ga0209283_1084262623300027875Vadose Zone SoilKFAGNFGAGLEYRFGRVGVRAEGRDYVYKFDRYGFDKTQHDIAWQGGVTVSF
Ga0307471_10272149213300032180Hardwood Forest SoilWSKFAGNFGAGLEYRFGQVGLRAEGRDFVYKFDRYGFNKTQHDIAWQGGLTLSF
Ga0214472_1001075623300033407SoilMRVVHTFSGRHGAGFEYRFSRIGVRAEARDYIYKFDRYGFDGTQHDIAWQGGVTVSF

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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