NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F058898

Metagenome / Metatranscriptome Family F058898

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F058898
Family Type Metagenome / Metatranscriptome
Number of Sequences 134
Average Sequence Length 46 residues
Representative Sequence AILAVKLPHGGNIELEGLLFAGAITLVALGDGPLSIAVKLKHSS
Number of Associated Samples 112
Number of Associated Scaffolds 134

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 73.13 %
% of genes from short scaffolds (< 2000 bps) 67.91 %
Associated GOLD sequencing projects 106
AlphaFold2 3D model prediction Yes
3D model pTM-score0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (75.373 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(23.134 % of family members)
Environment Ontology (ENVO) Unclassified
(48.507 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(55.224 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 40.28%    β-sheet: 0.00%    Coil/Unstructured: 59.72%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.42
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 134 Family Scaffolds
PF14559TPR_19 20.15
PF13432TPR_16 11.94
PF01960ArgJ 8.96
PF08281Sigma70_r4_2 2.24
PF16561AMPK1_CBM 1.49
PF13414TPR_11 0.75
PF13431TPR_17 0.75
PF01476LysM 0.75
PF02922CBM_48 0.75

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 134 Family Scaffolds
COG1364Glutamate N-acetyltransferase (ornithine transacetylase)Amino acid transport and metabolism [E] 8.96

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms75.37 %
UnclassifiedrootN/A24.63 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001686|C688J18823_10814107All Organisms → cellular organisms → Bacteria593Open in IMG/M
3300002558|JGI25385J37094_10069072All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1132Open in IMG/M
3300002560|JGI25383J37093_10048267All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1382Open in IMG/M
3300002912|JGI25386J43895_10012550All Organisms → cellular organisms → Bacteria2435Open in IMG/M
3300002912|JGI25386J43895_10157735All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium567Open in IMG/M
3300005174|Ga0066680_10160130All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1411Open in IMG/M
3300005175|Ga0066673_10246834All Organisms → cellular organisms → Bacteria1033Open in IMG/M
3300005175|Ga0066673_10262046All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1003Open in IMG/M
3300005177|Ga0066690_10582887All Organisms → cellular organisms → Bacteria747Open in IMG/M
3300005181|Ga0066678_10081197All Organisms → cellular organisms → Bacteria1923Open in IMG/M
3300005181|Ga0066678_10108679All Organisms → cellular organisms → Bacteria1689Open in IMG/M
3300005446|Ga0066686_10496594All Organisms → cellular organisms → Bacteria831Open in IMG/M
3300005447|Ga0066689_10389321All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium871Open in IMG/M
3300005454|Ga0066687_10090489All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1523Open in IMG/M
3300005458|Ga0070681_11473088All Organisms → cellular organisms → Bacteria605Open in IMG/M
3300005467|Ga0070706_101326782All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium659Open in IMG/M
3300005468|Ga0070707_100819749All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium894Open in IMG/M
3300005536|Ga0070697_100325285All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1325Open in IMG/M
3300005536|Ga0070697_100375626All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1230Open in IMG/M
3300005536|Ga0070697_100681145All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium906Open in IMG/M
3300005545|Ga0070695_101443099All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium571Open in IMG/M
3300005555|Ga0066692_10151629All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1423Open in IMG/M
3300005556|Ga0066707_10146360All Organisms → cellular organisms → Bacteria1494Open in IMG/M
3300005574|Ga0066694_10092091All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1412Open in IMG/M
3300005575|Ga0066702_10862663Not Available539Open in IMG/M
3300005576|Ga0066708_10163478All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1376Open in IMG/M
3300005879|Ga0075295_1045211All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium584Open in IMG/M
3300005879|Ga0075295_1059686All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium526Open in IMG/M
3300006031|Ga0066651_10458110All Organisms → cellular organisms → Bacteria677Open in IMG/M
3300006046|Ga0066652_100142373All Organisms → cellular organisms → Bacteria1999Open in IMG/M
3300006796|Ga0066665_10527614All Organisms → cellular organisms → Bacteria963Open in IMG/M
3300006800|Ga0066660_11313156All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium566Open in IMG/M
3300006804|Ga0079221_10020381All Organisms → cellular organisms → Bacteria2689Open in IMG/M
3300006847|Ga0075431_101500380All Organisms → cellular organisms → Bacteria633Open in IMG/M
3300009012|Ga0066710_102094391All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium832Open in IMG/M
3300009090|Ga0099827_11655983All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium557Open in IMG/M
3300009137|Ga0066709_100539716All Organisms → cellular organisms → Bacteria1650Open in IMG/M
3300009137|Ga0066709_102015435All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium799Open in IMG/M
3300009147|Ga0114129_10595632All Organisms → cellular organisms → Bacteria1433Open in IMG/M
3300010301|Ga0134070_10088961All Organisms → cellular organisms → Bacteria1068Open in IMG/M
3300010320|Ga0134109_10072423All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1170Open in IMG/M
3300010321|Ga0134067_10477751All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium513Open in IMG/M
3300010323|Ga0134086_10430496All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium535Open in IMG/M
3300010325|Ga0134064_10041385All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1387Open in IMG/M
3300010329|Ga0134111_10550870All Organisms → cellular organisms → Bacteria511Open in IMG/M
3300010337|Ga0134062_10271426All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium795Open in IMG/M
3300010397|Ga0134124_12971616All Organisms → cellular organisms → Bacteria518Open in IMG/M
3300012189|Ga0137388_11893848All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium527Open in IMG/M
3300012199|Ga0137383_10526077All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium866Open in IMG/M
3300012200|Ga0137382_10522646All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium844Open in IMG/M
3300012201|Ga0137365_10412763All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium996Open in IMG/M
3300012203|Ga0137399_10515559All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1003Open in IMG/M
3300012204|Ga0137374_11224371All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium524Open in IMG/M
3300012206|Ga0137380_11167255All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium655Open in IMG/M
3300012207|Ga0137381_10253694All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1529Open in IMG/M
3300012208|Ga0137376_10633600All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium924Open in IMG/M
3300012209|Ga0137379_11359037All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium615Open in IMG/M
3300012210|Ga0137378_11854154All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium506Open in IMG/M
3300012351|Ga0137386_10004263All Organisms → cellular organisms → Bacteria9402Open in IMG/M
3300012351|Ga0137386_10912331All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium629Open in IMG/M
3300012353|Ga0137367_10215166All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1389Open in IMG/M
3300012354|Ga0137366_10231111All Organisms → cellular organisms → Bacteria1375Open in IMG/M
3300012356|Ga0137371_10742962All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium749Open in IMG/M
3300012360|Ga0137375_11322945All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium542Open in IMG/M
3300012917|Ga0137395_10683470All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium743Open in IMG/M
3300012922|Ga0137394_11216955All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium617Open in IMG/M
3300012975|Ga0134110_10063353All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1465Open in IMG/M
3300012976|Ga0134076_10101182All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1143Open in IMG/M
3300014157|Ga0134078_10251368All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium742Open in IMG/M
3300015052|Ga0137411_1215336All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium532Open in IMG/M
3300015052|Ga0137411_1305273All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes4440Open in IMG/M
3300015245|Ga0137409_10175178All Organisms → cellular organisms → Bacteria1946Open in IMG/M
3300015356|Ga0134073_10085997All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium907Open in IMG/M
3300015359|Ga0134085_10104009All Organisms → cellular organisms → Bacteria1181Open in IMG/M
3300015359|Ga0134085_10616003All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium506Open in IMG/M
3300017959|Ga0187779_11161535All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium542Open in IMG/M
3300018084|Ga0184629_10045131All Organisms → cellular organisms → Bacteria1985Open in IMG/M
3300018431|Ga0066655_10217951All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1194Open in IMG/M
3300018433|Ga0066667_11374536All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium619Open in IMG/M
3300019866|Ga0193756_1000653All Organisms → cellular organisms → Bacteria2967Open in IMG/M
3300020004|Ga0193755_1000055All Organisms → cellular organisms → Bacteria29303Open in IMG/M
3300020059|Ga0193745_1116900All Organisms → cellular organisms → Bacteria557Open in IMG/M
3300021046|Ga0215015_10214584All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis6506Open in IMG/M
3300021080|Ga0210382_10564374All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium504Open in IMG/M
3300024330|Ga0137417_1277891All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1278Open in IMG/M
3300024330|Ga0137417_1383106All Organisms → cellular organisms → Bacteria2575Open in IMG/M
3300025324|Ga0209640_10099185All Organisms → cellular organisms → Bacteria2512Open in IMG/M
3300025905|Ga0207685_10235201All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium878Open in IMG/M
3300026295|Ga0209234_1065149All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1386Open in IMG/M
3300026298|Ga0209236_1120392All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1158Open in IMG/M
3300026301|Ga0209238_1186815All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium608Open in IMG/M
3300026308|Ga0209265_1236831All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium505Open in IMG/M
3300026310|Ga0209239_1173354All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium823Open in IMG/M
3300026314|Ga0209268_1002471All Organisms → cellular organisms → Bacteria8791Open in IMG/M
3300026314|Ga0209268_1071534All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1039Open in IMG/M
3300026314|Ga0209268_1189249All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium510Open in IMG/M
3300026333|Ga0209158_1314680All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium540Open in IMG/M
3300026551|Ga0209648_10779291All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium522Open in IMG/M
3300027573|Ga0208454_1014538All Organisms → cellular organisms → Bacteria1921Open in IMG/M
3300027725|Ga0209178_1017233All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes2255Open in IMG/M
3300032205|Ga0307472_102486450All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium526Open in IMG/M
3300032770|Ga0335085_10878748All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium979Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil23.13%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil20.15%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil15.67%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil11.94%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere5.22%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.73%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere3.73%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil2.24%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil2.24%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment1.49%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil1.49%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil1.49%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.75%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.75%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.75%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.75%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.75%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.75%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.75%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil0.75%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.75%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.75%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001686Grasslands soil microbial communities from Hopland, California, USAEnvironmentalOpen in IMG/M
3300002558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cmEnvironmentalOpen in IMG/M
3300002560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cmEnvironmentalOpen in IMG/M
3300002912Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cmEnvironmentalOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005175Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122EnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005181Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127EnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005447Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138EnvironmentalOpen in IMG/M
3300005451Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130EnvironmentalOpen in IMG/M
3300005454Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136EnvironmentalOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005556Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156EnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005574Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143EnvironmentalOpen in IMG/M
3300005575Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151EnvironmentalOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005587Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103EnvironmentalOpen in IMG/M
3300005879Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_301EnvironmentalOpen in IMG/M
3300006031Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006049Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1Host-AssociatedOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300010301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015EnvironmentalOpen in IMG/M
3300010320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015EnvironmentalOpen in IMG/M
3300010321Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015EnvironmentalOpen in IMG/M
3300010322Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010323Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaGEnvironmentalOpen in IMG/M
3300010329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015EnvironmentalOpen in IMG/M
3300010333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015EnvironmentalOpen in IMG/M
3300010337Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300011443Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT630_2EnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012353Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012354Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012360Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012975Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015EnvironmentalOpen in IMG/M
3300012976Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300014157Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300015052Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015054Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015245Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015356Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300015358Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300015359Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015EnvironmentalOpen in IMG/M
3300017959Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MGEnvironmentalOpen in IMG/M
3300018084Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1EnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300019248Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT660_2_16_1Ra (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019866Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1m1EnvironmentalOpen in IMG/M
3300020004Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2EnvironmentalOpen in IMG/M
3300020059Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a2EnvironmentalOpen in IMG/M
3300021046Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depthEnvironmentalOpen in IMG/M
3300021080Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redoEnvironmentalOpen in IMG/M
3300024330Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300025324Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)EnvironmentalOpen in IMG/M
3300025905Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025935Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026295Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026298Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026308Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)EnvironmentalOpen in IMG/M
3300026310Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026314Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)EnvironmentalOpen in IMG/M
3300026318Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)EnvironmentalOpen in IMG/M
3300026333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)EnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300027573Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100 (SPAdes)EnvironmentalOpen in IMG/M
3300027725Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)EnvironmentalOpen in IMG/M
3300031858Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
C688J18823_1081410713300001686SoilAILAVKVPGGGNXELEALLLAGAVTLVALGDGPLSVAVRFKHSPT*
JGI25385J37094_1006907213300002558Grasslands SoilCMMFEMAVAMLVQLHGGHNIELEGLLFAGALTLVALGDGPLSIAIRFKRPPA*
JGI25383J37093_1004826723300002560Grasslands SoilLCMALEMIIAILAVKLPHGGNIELEGLLFAGAITLVALGDGPLSIAVKLKHSS*
JGI25386J43895_1001255033300002912Grasslands SoilCMMVEMAVAMLVQLHGGHNIELEGLLFAGALTLVALGDGPLSVAVRLKHGN*
JGI25386J43895_1015773523300002912Grasslands SoilMALEMLVAILAVKLPHSGNIELEGLLFAGAITLVALGDGPLSIAVKLKHSST*
Ga0066680_1016013023300005174SoilCMAIEMLVAILAVQLPKGSGFEVEGLLFAGAVTLIALGDGPLSIAVKLKHGGS*
Ga0066673_1024683423300005175SoilACMAVEMVVAILTIQLPRGSSFELEGLLLAGALTLMALGDGPLSLAVRFKKPTV*
Ga0066673_1026204623300005175SoilEMLVAILAVQLRKGAGFEVEGLLFAGAITLIALGDGPLSIAVKLKHSS*
Ga0066690_1058288723300005177SoilMAIEMLVAIFALKVPHGGNIELEGLLLAGAITLVALGDGPLSIAVKLKHSG*
Ga0066678_1008119733300005181SoilAVEMLVAILVVRLPHHGNFELEGLLFAGAVTLVALGDGPLSVAVKLKHGT*
Ga0066678_1010867913300005181SoilACMAVEMLVAILAVQLPRHGNFELEGLLFAGALTLVALGDGPLSVAVKLKHGT*
Ga0066686_1049659423300005446SoilCMAVEMVVAILTIQLPRGSSFELEGLLLAGALTLMALGDGPLSIAVRFKKPTV*
Ga0066689_1038932113300005447SoilVAILAVQLPRGGNFELEGLLFAGAITLFALGDGPLSVAVKLRHGS*
Ga0066681_1081976413300005451SoilAVQLPKGSGFEVEGLLFAGAVTLIALGDGPLSIAVKLKHSST*
Ga0066687_1009048923300005454SoilFAVKVPHGGNIELEGLLLAGAITLVALGDGPLSIAVKLKHGS*
Ga0070681_1147308823300005458Corn RhizosphereTMAVVMVVAIVAVKIPGGRSWELEALLLAGAVTLVALGDGPLSIAVRFKRPST*
Ga0070706_10132678213300005467Corn, Switchgrass And Miscanthus RhizosphereALCMALEMIIAILAVKLPHGGNIELEGLLFAGAITLVALGDGPLSIAVKLKHSS*
Ga0070707_10081974923300005468Corn, Switchgrass And Miscanthus RhizosphereVAIFAVKVPHGGNIELEGLLLAGAITLVALGDGPLSIAVKLKHSSS*
Ga0070697_10032528523300005536Corn, Switchgrass And Miscanthus RhizosphereLCMALEMIIAILAVKLPHGGNIELEALLFAGAITLVALGDGPLSIAVKLKHSG*
Ga0070697_10037562623300005536Corn, Switchgrass And Miscanthus RhizosphereLALKLPHRGNFELEGLLFAGAITLVALGDGPLSVAVKLKHSS*
Ga0070697_10068114513300005536Corn, Switchgrass And Miscanthus RhizosphereLALKLPHRGNFELEGLLFAGAITLVALGDGPLSVAVKLKHGT*
Ga0070695_10144309913300005545Corn, Switchgrass And Miscanthus RhizosphereILAVKLPHGGNIELEGLLFAGAITLVALGDGPLSIAVKLKHSS*
Ga0066692_1015162913300005555SoilALEMIVAILAVKLPHSGNIELEGLLFAGAITLVALGDGPLSIAVKLKHSS*
Ga0066707_1014636013300005556SoilMVVAILAVKVRGGGNFELEALLLAGAVTLVALGDGPLSVAVRFKQRPS*
Ga0066704_1003722713300005557SoilGGNIELEALLLAGALTLVALGDGPLSVAIGLKRGRS*
Ga0066694_1009209123300005574SoilILAVQLPRGGNFELEGLLFAGAITLFALGDGPLSVAVRFKHTGT*
Ga0066702_1086266313300005575SoilVKVPHGGNIELEGLLLAGAITLVALGDGPLSIAVKLKHSST*
Ga0066708_1016347823300005576SoilMVVAILAVQLPRGGNFELEGLLFAGAITLFALGDGPLSVAVRFKHTGT*
Ga0066654_1000729163300005587SoilGGNFELEGLLFAGAITLFALGDGPLSVAVKLKHTGT*
Ga0075295_104521113300005879Rice Paddy SoilVQLPKGAGFEVEGLLFAGAVTLIALGDGPLSIAVRLKHSST*
Ga0075295_105968623300005879Rice Paddy SoilVEMVIAILAVKLPQHGNIELEGLLFAGAVTLFALGDGPLSVAIGLKRRG*
Ga0066651_1045811013300006031SoilFNMAVAILAVVLPKPPELEGLLLAGSLTLVALGDGPLSIGIYFKKPAM*
Ga0066651_1074732223300006031SoilQLPKGSGFEVEGLLFAGAVTLIALGDGPLSIAVKLKHGGS*
Ga0066652_10014237313300006046SoilEMLVAILAVQLPRHGNFELEGLLFAGALTLVALGDGPLSVAVKLKHGT*
Ga0075417_1005572813300006049Populus RhizosphereLLPHGQIPELEGMLLAGSLALVALGDGPLSIGLTLKKGSD*
Ga0079222_1141473223300006755Agricultural SoilPKGASFEVEGLLFAGAVTLIALGDGPLSIAVKLKHSGN*
Ga0066665_1052761423300006796SoilEMVVAILAVKVRGGGNFELEALLLAGAVTLVALGDGPLSVAVRFKQRPS*
Ga0066659_1011645533300006797SoilGSGFEVEGLLFAGAVTLIALGDGPLSIAVKLKHSG*
Ga0066660_1131315613300006800SoilMAIEMVVAILAVQLPRGGNFELEGLLFAGAITLFALGDGPLSVAVKLRHGS*
Ga0079221_1002038133300006804Agricultural SoilVIVILALKLPHRGNFELEGLLFAGAITLVALGDGPLSVAVKLKHGT*
Ga0075431_10150038023300006847Populus RhizosphereMVVAIIAVRLAGHQSFELEALLLAGALTLVALGDGPLSIAVKFKQRS*
Ga0075433_1077659123300006852Populus RhizosphereLPHGGNIELEGLLFAGAITLVALGDGPLSIAVKLKHSS*
Ga0075424_10013255813300006904Populus RhizosphereDFELEALLLAGAVTLVALGDGPLSVAVRFKRPSEQS*
Ga0099793_1013581523300007258Vadose Zone SoilNLELEALLLAGAVTLVALGDGPLSIAVRFKQPGS*
Ga0066710_10209439113300009012Grasslands SoilMALEMIVAILAVKLPHSGNIELEGLLFAGAITLVALGDGPLSIAVKLKHSS
Ga0066710_10229708213300009012Grasslands SoilVPRGGNIELEALLLAGALTLVALGDGPLSVAIGLKRGDS
Ga0099827_1165598323300009090Vadose Zone SoilVEMVVAILLVKVPHGGNIELEGLLLAGAITLVALGDGPVSVAVRSIQNN*
Ga0066709_10053971633300009137Grasslands SoilLAVKLPHGGNIELEGLLFAGAITLVALGDGPLSIAVKLKHGGS*
Ga0066709_10201543523300009137Grasslands SoilCMAIEMVVAILAVQLPRGGNFELEGLLFAGAITLFALGDGPLSVAVKLRHGG*
Ga0114129_1059563223300009147Populus RhizosphereMAVEMVVAILTIQLPRGSSFELEGLLLAGALTLMALGDGPLSIAVRFKRPAM*
Ga0134070_1008896123300010301Grasslands SoilAILTVQLPHGSNFELEGLLLAGAVTLMALGDGPLSVAVRFKRPAI*
Ga0134109_1007242313300010320Grasslands SoilAILAVQLPRGGNFELEGLLFAGAITLFALGDGPLSVAVRFKHTGT*
Ga0134109_1017984413300010320Grasslands SoilSGFEVEGLLFAGAVTLIALGDGPLSIAVKLKHGGS*
Ga0134067_1006024913300010321Grasslands SoilGNFELEGLLFAGAITLFALGDGPLSVAVKLKHGS*
Ga0134067_1047775113300010321Grasslands SoilEMLVAILAVQLRKGAGFEVEGLLFAGAITLIALGDGPLSIAVKLKHSA*
Ga0134084_1017021323300010322Grasslands SoilPHGGNIELEGLLLAGAITLVALGDGPLSIAVKLKHSS*
Ga0134086_1043049623300010323Grasslands SoilIAAVKVPSGGNIELEALLLAGAVTLVALGDGPLSIAVRFKHGG*
Ga0134064_1004138513300010325Grasslands SoilLEMIIAILAVKLPHGGNIELEGLLFAGAITLVALGDGPLSIAVKLKHSG*
Ga0134111_1055087023300010329Grasslands SoilAWCMAIEMLVAILAVQLPKGVNFELEGLLFAGAITLVALGDGPLSVAVKLKHGS*
Ga0134080_1052191623300010333Grasslands SoilGNIELEGLLFAGAITLVALGDGPLSIAVKLKHTS*
Ga0134063_1008650123300010335Grasslands SoilGSGFEVEGLLFAGAVTLIALGDGPLSIAVKLKHSS*
Ga0134062_1027142613300010337Grasslands SoilMAVEMVVAILAEKLPHGGNIDVEALLFAGAITLVALGDGPLSIAVKLKHSST*
Ga0134124_1297161623300010397Terrestrial SoilEMVVAILAVTLPGHQNFELEALLLAGAVTLVALGDGPLSVAVKFKHSPT*
Ga0137457_101645313300011443SoilNFELEALLLAGAVTLVALGDGPLSIAVRFKQAPS*
Ga0137388_1189384813300012189Vadose Zone SoilCMALEMIIAILAVKLPHGGNIELEGLLFAGAITLVALGDGPLSIAVKLKHSST*
Ga0137383_1052607713300012199Vadose Zone SoilIAILAVKLPHGGNIELEGLLFAGAITLVALGDGPLSIAVKLKHTS*
Ga0137382_1052264623300012200Vadose Zone SoilAILAVQLPRGGNFELEGLLFAGAITLFALGDGPLSVAVKFKHTGT*
Ga0137365_1041276323300012201Vadose Zone SoilLEMIIAILAVKLPHGGNIELEGLLFAGAITLVALGDGPLSIAVKLKHSS*
Ga0137399_1051555923300012203Vadose Zone SoilAVEMVVAILAAKVPQRGNIELEGLLLAGAITLVALGDGPLSIAIGLKRRA*
Ga0137374_1122437113300012204Vadose Zone SoilVEMVVAILAVKLPHGGNIELEALLFAGALTLVALGDGPLSVAIGLKRGRS*
Ga0137380_1116725523300012206Vadose Zone SoilEMVVAILAVKVPQAGNFELEGLLLAGAITLVALGDGPLSIAIGLKRGL*
Ga0137381_1025369413300012207Vadose Zone SoilKVPQAENFELEGLLLAGAITLVALGDGPLSVAIGLKRGL*
Ga0137381_1144075413300012207Vadose Zone SoilKGAGFEVEGLLFAGAVTLIALGDGPLSIAVKLKHSST*
Ga0137376_1063360023300012208Vadose Zone SoilMAVEMVVAILAVKVPQAGNFELEGLLLAGAITLVALGDGPLSIAIGLKRGL*
Ga0137379_10014789103300012209Vadose Zone SoilGGHNIELEGLLFAGALTLVALGDGPLSVAVRFKHTGM*
Ga0137379_1135903713300012209Vadose Zone SoilMALEMIIAILAVKLPHGGNIELEGLLFAGAITLVALGDGPLSIAVKLKHTS*
Ga0137378_1185415423300012210Vadose Zone SoilALEMIIAILAVKLPHGGNIELEGLLFAGAITLVALGDGPLSIAVKLKHTS*
Ga0137386_1000426313300012351Vadose Zone SoilMAVAIFAVKVPRGGNIELEALLLAGALTLVALGDGPLSVAIGLKRGRS*
Ga0137386_1091233123300012351Vadose Zone SoilMIIAILAVKLPHGGNIELEGLLFAGAITLVALGDGPLSIAVKLKHTT*
Ga0137367_1021516623300012353Vadose Zone SoilALEMINAILAVKLPHGGNIELEGLLFAGAITLVALGDGPLSIAVKLKHSS*
Ga0137367_1119185023300012353Vadose Zone SoilGGFEVEGLLFAGAVTLIALGDGPLSIAVRLKHSST*
Ga0137366_1023111133300012354Vadose Zone SoilTVQLPHGGNFELEGLLLAGAVTLMALGDGPLSVAVRFKRPAM*
Ga0137371_1074296223300012356Vadose Zone SoilAVKVPRGGNIELEALLLAGALTLVALGDGPLSVAIGLKRGRS*
Ga0137375_1132294523300012360Vadose Zone SoilVAILAVQLPRGGNFELEGLLFAGAITLVALGDGPLSIAVKLKHGS*
Ga0137395_1068347023300012917Vadose Zone SoilWAACMAVEMVVAILAAKFPQRGNIELECLLLAGAITLVALGDGPLSVAIGLKRRA*
Ga0137394_1121695513300012922Vadose Zone SoilACMAIEMLVAILAVQLPKGSGFEVEGLLFAGAVTLIALGDGPLSIAVKLKHSST*
Ga0137410_1098659413300012944Vadose Zone SoilLAIMPRGGSFELEGLLFAGAVTLVALGDGPLSVAVKFKKGD*
Ga0134110_1006335313300012975Grasslands SoilMAIEMLVAILAVQLPKGSGFEVEGLLFAGAVTLIALGDGPLSIAVKLKHGS*
Ga0134076_1010118223300012976Grasslands SoilAILAVKLPHGGNIELEGLLFAGAITLVALGDGPLSIAVKLKHSS*
Ga0164304_1077827913300012986SoilPHGGNIELEGLLFAGAITLVALGDGPLSIAVKLKHSST*
Ga0157378_1162065113300013297Miscanthus RhizosphereHQNFELEALLLAGAVTLVALGDGPLSVAVKFKHSPT*
Ga0134078_1022844723300014157Grasslands SoilHGGNIELEGLLLAGAITLVALGDGPLSIAVKLKHSGT*
Ga0134078_1025136813300014157Grasslands SoilLAVQLPKGSGFEVEGLLFAGAVTLIALGDGPLSIAVKLKHGGS*
Ga0134078_1028002323300014157Grasslands SoilQLRGGHNIELEGLLFAGALTLVALGDGPLSVAVRFKHTGM*
Ga0137411_121533623300015052Vadose Zone SoilAACMAVEMVVAILAAKVPQRGNIELEGLLLAGAITLVALGDGPLSIAIGLKRRA*
Ga0137411_130527363300015052Vadose Zone SoilMALEMIIAILAVKLPHGGNIELEGLLFAGAITLVALGDGPLSIAVKLKHSST*
Ga0137420_131178113300015054Vadose Zone SoilGNIELEGLLFAGAITLVALGDGPLSIAVKLKHSSS*
Ga0137409_1017517823300015245Vadose Zone SoilILAVKVPHGGNIEVEALLFAGAITLVALGDGPLSIAVKLKHSSS*
Ga0134073_1008599723300015356Grasslands SoilVCMAIEMVVAILAVQVPRGGNFELEGLLFAGAITLFALGDGPLSVAVKLKHTGT*
Ga0134089_1015151213300015358Grasslands SoilIQLRGGHNIELEALLFAGALTLVALGDGPLSVAVKLKHSGT*
Ga0134085_1010400913300015359Grasslands SoilVAILTVQLPHGSNFELEGLLLAGAVTLMALGDGPLSVAVRFKRPAI*
Ga0134085_1061600323300015359Grasslands SoilAVKLPHSGNIELEGLLFAGAITLVALGDGPLSIAVKLKHSS*
Ga0187779_1116153513300017959Tropical PeatlandVWAACMVVDMTVAILAVQLPRGSSFELEGLLLGAAAALVALGDGPLSVAIGLKRAR
Ga0184629_1004513133300018084Groundwater SedimentMLVAILAMKLRNGMNFELEALLLAGAVTLVALGDGPLSIAVRFKQRSA
Ga0066655_1021795113300018431Grasslands SoilMIVAILAVKLPHSGNIELEGLLFAGAITLVALGDGPLSIAVKLKHSS
Ga0066667_1137453613300018433Grasslands SoilAVAMLVQLHGGHNIELEGLLFAGALTLVALGDGPLSVAVRLKHGN
Ga0066662_1030414013300018468Grasslands SoilGSGFEVEGLLFAGAVTLIALGDGPLSIAVKLKHSST
Ga0180117_142143813300019248Groundwater SedimentLPHGSKFELEGLLLAGAITLVALGDGPLSVAIGLKRRS
Ga0193756_100065343300019866SoilGNIELEGLLFAGAITLVALGDGPLSIAVKLKHSSS
Ga0193755_100005513300020004SoilLAVKLPHGGNIELEGLLFAGAITLVALGDGPLSIAVKLKHSST
Ga0193745_111690013300020059SoilEMVVAILAVKFPHRGNIELEGLLLAGAITLVALGDGPLSVAIGLKRRS
Ga0215015_1021458413300021046SoilLAVDMLVAILAVQLPAGRPWELEGLLFAGCVTLVALGDGPLSVAVKLKHSST
Ga0210382_1056437413300021080Groundwater SedimentLAVKLPRGGNIELEGLLFAGAITLVALGDGPLSIAVKLKHSST
Ga0137417_127789113300024330Vadose Zone SoilVKLPHGGNLELEGLLFELEGLLFAGAITLVALGDGPLSIAVKLKHSST
Ga0137417_138310633300024330Vadose Zone SoilIIAILAVKLPHGGNIELEGLLFAGAITLVALGDGPLSIAVKLKHSS
Ga0209640_1009918513300025324SoilVMLGAIFVAKLPAGRNFELDALLLAGALTLIALGDGPLSLAVRFKHRGD
Ga0207685_1023520113300025905Corn, Switchgrass And Miscanthus RhizosphereILAVKLPHGGNIELEGLLFAGAITLVALGDGPLSIAVKLKHSS
Ga0207709_1116458523300025935Miscanthus RhizospherePGHQNFELEALLLAGAVTLVALGDGPLSVAVKFKHSPT
Ga0209234_106514913300026295Grasslands SoilAILAVQLPRGGNFELEGLLFAGAITLFALGDGPLSVAVKLRHGS
Ga0209236_112039223300026298Grasslands SoilCMMFEMAVAMLVQLHGGHNIELEGLLFAGALTLVALGDGPLSIAIRFKRPPA
Ga0209238_118681513300026301Grasslands SoilEMAVAMLVQLHGGHNIELEGLLFAGALTLVALGDGPLSIAIRFKRPPA
Ga0209265_123683123300026308SoilAILAVQVPRGGNFELEGLLFAGAITLFALGDGPLSVAVKLKHTGT
Ga0209239_117335423300026310Grasslands SoilVKVPHGGNIELEGLLLAGAITLVALGDGPLSIAVKLKHSN
Ga0209268_100247113300026314SoilALEMIIAILAVKLPHGGNIELEGLLFAGAITLVALGDGPLSIAVKLKHSS
Ga0209268_107153423300026314SoilAACMMFEMAIAMLIQLRGGHNIELEGLLFAGALTLVALGDGPLSVAVRFKHTGM
Ga0209268_118924923300026314SoilCMAIEMLVAILAVQLPKGSGFEVEGLLFAGAVTLIALGDGPLSIAVKLKHGS
Ga0209471_109719013300026318SoilLPKGSGFEVEGLLFAGAVTLIALGDGPLSIAVKLKHSG
Ga0209158_131468023300026333SoilMFEMAVAMIIQLHGGHNIELEGLLFAGALTLVALGDGPLSIAIRFKRPPA
Ga0209648_1077929113300026551Grasslands SoilVEMAVAIVAVKLPGHQNLELEALLLAGAVTLVALGDGPLSIAVRFKQPSS
Ga0208454_101453813300027573SoilVVMVVAILAVKLPGHQNFELEALLLAGAVTLVALGDGPLSIAVRFKRPPM
Ga0209178_101723313300027725Agricultural SoilVILALKLPHRGNFELEGLLIAGAITLVALGDGPLSVAVKLKHSG
Ga0310892_1123977223300031858SoilHQNVELEALLLAGAVTLVALGDGPLSVAVKFKHSPT
Ga0307472_10248645013300032205Hardwood Forest SoilMALEMIIAILAVKLPHGGNIELEGLLFAGAITLVALGDGPLSIAVKLKHSS
Ga0335085_1087874813300032770SoilMAANMVVAILAVQLPKGANFEVEALLLAGAVTLVALGDGPLSVAIGLRQGN

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.