Metagenome / Metatranscriptome Family F058956

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F058956
Family Type	Metagenome / Metatranscriptome
Number of Sequences	134
Average Sequence Length	47 residues
Representative Sequence	MEIFNAIIDSGGLELILAATGMGAAIPAVVMYKKIRKAKKLKEQILG
Number of Associated Samples	79
Number of Associated Scaffolds	134

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	87.20 %
% of genes near scaffold ends (potentially truncated)	19.40 %
% of genes from short scaffolds (< 2000 bps)	74.63 %
Associated GOLD sequencing projects	62
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (69.403 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous (44.030 % of family members)
Environment Ontology (ENVO)	Unclassified (55.970 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (88.060 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 56.00% β-sheet: 0.00% Coil/Unstructured: 44.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 134 Family Scaffolds
PF08291	Peptidase_M15_3	61.94
PF00589	Phage_integrase	11.19
PF16778	Phage_tail_APC	2.24
PF05951	Peptidase_M15_2	1.49
PF13362	Toprim_3	0.75
PF02899	Phage_int_SAM_1	0.75

COG ID	Name	Functional Category	% Frequency in 134 Family Scaffolds
COG3108	Uncharacterized conserved protein YcbK, DUF882 family	Function unknown [S]	1.49
COG4973	Site-specific recombinase XerC	Replication, recombination and repair [L]	0.75
COG4974	Site-specific recombinase XerD	Replication, recombination and repair [L]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.40 %
All Organisms	root	All Organisms	30.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.40 %
cellular organisms	root	All Organisms → cellular organisms	25.37 %
Viruses	superkingdom	All Organisms → Viruses	5.22 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.40 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	25.37 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.22 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.40 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	23.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.22 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.40 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	16.42 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.22 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	0.75 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.40 %
Rickettsiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales	5.22 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.22 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.75 %
Alphaproteobacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis	0.75 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.75 %
Phycisphaerae	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	0.75 %
Magnetococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Magnetococcales	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.40 %
unclassified Rickettsiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales	5.22 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.22 %
unclassified Magnetococcales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Magnetococcales → unclassified Magnetococcales	0.75 %
unclassified Phycisphaerae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae	0.75 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.75 %
SAR116 cluster	clade	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster	0.75 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.40 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.22 %
Rickettsiales bacterium TMED211	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium TMED211	3.73 %
Rickettsiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1.49 %
Magnetococcales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Magnetococcales → unclassified Magnetococcales → Magnetococcales bacterium	0.75 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	0.75 %
Candidatus Puniceispirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum	0.75 %
Candidatus Endolissoclinum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Candidatus Endolissoclinum	0.75 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.40 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.22 %
Rickettsiales bacterium TMED211	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium TMED211	3.73 %
Rickettsiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1.49 %
unclassified Candidatus Puniceispirillum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → unclassified Candidatus Puniceispirillum	0.75 %
unclassified Candidatus Endolissoclinum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Candidatus Endolissoclinum → unclassified Candidatus Endolissoclinum	0.75 %
Magnetococcales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Magnetococcales → unclassified Magnetococcales → Magnetococcales bacterium	0.75 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	0.75 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.40 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.22 %
Rickettsiales bacterium TMED211	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium TMED211	3.73 %
Rickettsiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1.49 %
Candidatus Endolissoclinum sp. TMED37	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Candidatus Endolissoclinum → unclassified Candidatus Endolissoclinum → Candidatus Endolissoclinum sp. TMED37	0.75 %
Candidatus Puniceispirillum sp. TMED52	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → unclassified Candidatus Puniceispirillum → Candidatus Puniceispirillum sp. TMED52	0.75 %
Magnetococcales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Magnetococcales → unclassified Magnetococcales → Magnetococcales bacterium	0.75 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	0.75 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000116\|DelMOSpr2010_c10011981	All Organisms → cellular organisms → Bacteria → Proteobacteria	4456	Open in IMG/M
3300000116\|DelMOSpr2010_c10138223	Not Available	852	Open in IMG/M
3300000116\|DelMOSpr2010_c10139345	Not Available	847	Open in IMG/M
3300000116\|DelMOSpr2010_c10189317	Not Available	668	Open in IMG/M
3300002483\|JGI25132J35274_1009685	All Organisms → Viruses → Predicted Viral	2377	Open in IMG/M
3300004097\|Ga0055584_101016440	Not Available	867	Open in IMG/M
3300005512\|Ga0074648_1004536	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	11047	Open in IMG/M
3300005512\|Ga0074648_1067298	All Organisms → Viruses → Predicted Viral	1428	Open in IMG/M
3300005512\|Ga0074648_1171133	Not Available	633	Open in IMG/M
3300006025\|Ga0075474_10000715	All Organisms → cellular organisms → Bacteria	13124	Open in IMG/M
3300006025\|Ga0075474_10011301	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Candidatus Endolissoclinum → unclassified Candidatus Endolissoclinum → Candidatus Endolissoclinum sp. TMED37	3393	Open in IMG/M
3300006025\|Ga0075474_10130291	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	798	Open in IMG/M
3300006026\|Ga0075478_10021150	All Organisms → Viruses → Predicted Viral	2192	Open in IMG/M
3300006027\|Ga0075462_10041256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium TMED211	1476	Open in IMG/M
3300006027\|Ga0075462_10070970	Not Available	1096	Open in IMG/M
3300006027\|Ga0075462_10168982	Not Available	664	Open in IMG/M
3300006637\|Ga0075461_10016687	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → unclassified Candidatus Puniceispirillum → Candidatus Puniceispirillum sp. TMED52	2424	Open in IMG/M
3300006637\|Ga0075461_10033339	Not Available	1694	Open in IMG/M
3300006637\|Ga0075461_10126231	All Organisms → cellular organisms → Bacteria → Proteobacteria	794	Open in IMG/M
3300006637\|Ga0075461_10208927	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	582	Open in IMG/M
3300006637\|Ga0075461_10237899	Not Available	537	Open in IMG/M
3300006637\|Ga0075461_10240051	Not Available	534	Open in IMG/M
3300006802\|Ga0070749_10087371	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Magnetococcales → unclassified Magnetococcales → Magnetococcales bacterium	1856	Open in IMG/M
3300006802\|Ga0070749_10609881	Not Available	588	Open in IMG/M
3300006802\|Ga0070749_10694265	Not Available	544	Open in IMG/M
3300006802\|Ga0070749_10749802	Not Available	520	Open in IMG/M
3300006802\|Ga0070749_10794759	Not Available	502	Open in IMG/M
3300006810\|Ga0070754_10313056	Not Available	702	Open in IMG/M
3300006810\|Ga0070754_10314746	Not Available	699	Open in IMG/M
3300006868\|Ga0075481_10077312	Not Available	1250	Open in IMG/M
3300006919\|Ga0070746_10326346	Not Available	700	Open in IMG/M
3300007234\|Ga0075460_10270482	Not Available	562	Open in IMG/M
3300007236\|Ga0075463_10263449	Not Available	553	Open in IMG/M
3300007344\|Ga0070745_1341978	Not Available	526	Open in IMG/M
3300007345\|Ga0070752_1273057	Not Available	651	Open in IMG/M
3300007346\|Ga0070753_1309788	Not Available	563	Open in IMG/M
3300007539\|Ga0099849_1101473	Not Available	1147	Open in IMG/M
3300007539\|Ga0099849_1118336	All Organisms → cellular organisms → Bacteria → Proteobacteria	1044	Open in IMG/M
3300007539\|Ga0099849_1160422	Not Available	865	Open in IMG/M
3300007539\|Ga0099849_1337340	Not Available	538	Open in IMG/M
3300007539\|Ga0099849_1339271	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	536	Open in IMG/M
3300007540\|Ga0099847_1147952	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	699	Open in IMG/M
3300007541\|Ga0099848_1148509	Not Available	869	Open in IMG/M
3300007640\|Ga0070751_1361573	Not Available	529	Open in IMG/M
3300008012\|Ga0075480_10242087	Not Available	936	Open in IMG/M
3300009000\|Ga0102960_1048281	Not Available	1569	Open in IMG/M
3300009000\|Ga0102960_1185821	Not Available	743	Open in IMG/M
3300009001\|Ga0102963_1009722	All Organisms → Viruses → Predicted Viral	4116	Open in IMG/M
3300009071\|Ga0115566_10717227	Not Available	553	Open in IMG/M
3300009124\|Ga0118687_10004181	Not Available	5001	Open in IMG/M
3300009124\|Ga0118687_10281220	Not Available	623	Open in IMG/M
3300010297\|Ga0129345_1055573	Not Available	1509	Open in IMG/M
3300010297\|Ga0129345_1109137	Not Available	1020	Open in IMG/M
3300010297\|Ga0129345_1173541	Not Available	772	Open in IMG/M
3300010368\|Ga0129324_10154980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium TMED211	952	Open in IMG/M
3300013010\|Ga0129327_10096077	Not Available	1460	Open in IMG/M
3300017697\|Ga0180120_10342318	Not Available	593	Open in IMG/M
3300017720\|Ga0181383_1124811	Not Available	691	Open in IMG/M
3300017949\|Ga0181584_10435010	Not Available	816	Open in IMG/M
3300017949\|Ga0181584_10501606	Not Available	746	Open in IMG/M
3300017950\|Ga0181607_10540408	Not Available	619	Open in IMG/M
3300017951\|Ga0181577_10009140	All Organisms → cellular organisms → Bacteria → Proteobacteria	7460	Open in IMG/M
3300017951\|Ga0181577_10224097	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1246	Open in IMG/M
3300017951\|Ga0181577_10770379	Not Available	581	Open in IMG/M
3300017951\|Ga0181577_10847384	Not Available	548	Open in IMG/M
3300017952\|Ga0181583_10834436	Not Available	540	Open in IMG/M
3300017956\|Ga0181580_10446281	Not Available	854	Open in IMG/M
3300017962\|Ga0181581_10504264	Not Available	748	Open in IMG/M
3300017962\|Ga0181581_10655762	Not Available	634	Open in IMG/M
3300017964\|Ga0181589_10585821	Not Available	711	Open in IMG/M
3300017967\|Ga0181590_10719703	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	671	Open in IMG/M
3300017968\|Ga0181587_10508457	Not Available	781	Open in IMG/M
3300018415\|Ga0181559_10675054	Not Available	555	Open in IMG/M
3300018416\|Ga0181553_10133039	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium TMED211	1499	Open in IMG/M
3300018418\|Ga0181567_10816410	Not Available	590	Open in IMG/M
3300018421\|Ga0181592_11098162	Not Available	508	Open in IMG/M
3300018423\|Ga0181593_11134915	Not Available	530	Open in IMG/M
3300018424\|Ga0181591_10182018	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1664	Open in IMG/M
3300018424\|Ga0181591_10961913	Not Available	582	Open in IMG/M
3300018426\|Ga0181566_10693800	Not Available	700	Open in IMG/M
3300018428\|Ga0181568_10934613	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	663	Open in IMG/M
3300018428\|Ga0181568_11340935	Not Available	533	Open in IMG/M
3300019280\|Ga0182068_1582504	Not Available	754	Open in IMG/M
3300019708\|Ga0194016_1013603	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium TMED211	863	Open in IMG/M
3300019756\|Ga0194023_1019011	Not Available	1389	Open in IMG/M
3300019756\|Ga0194023_1027609	Not Available	1150	Open in IMG/M
3300019765\|Ga0194024_1000528	Not Available	7554	Open in IMG/M
3300019765\|Ga0194024_1036475	All Organisms → cellular organisms → Bacteria → Proteobacteria	1074	Open in IMG/M
3300019765\|Ga0194024_1037595	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1058	Open in IMG/M
3300021379\|Ga0213864_10155429	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1156	Open in IMG/M
3300021958\|Ga0222718_10008867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	7708	Open in IMG/M
3300021958\|Ga0222718_10009133	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	7559	Open in IMG/M
3300021958\|Ga0222718_10488215	Not Available	598	Open in IMG/M
3300021959\|Ga0222716_10017571	Not Available	5337	Open in IMG/M
3300021959\|Ga0222716_10384532	Not Available	820	Open in IMG/M
3300021960\|Ga0222715_10009236	Not Available	8014	Open in IMG/M
3300021960\|Ga0222715_10018034	All Organisms → cellular organisms → Bacteria → Proteobacteria	5347	Open in IMG/M
3300021960\|Ga0222715_10024411	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4452	Open in IMG/M
3300022183\|Ga0196891_1075374	Not Available	600	Open in IMG/M
3300022187\|Ga0196899_1144193	Not Available	667	Open in IMG/M
3300022200\|Ga0196901_1009095	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	4255	Open in IMG/M
3300022934\|Ga0255781_10291506	Not Available	745	Open in IMG/M
3300022934\|Ga0255781_10460597	Not Available	521	Open in IMG/M
3300023116\|Ga0255751_10379992	All Organisms → cellular organisms → Bacteria → Proteobacteria	706	Open in IMG/M
3300023175\|Ga0255777_10614398	Not Available	537	Open in IMG/M
3300023180\|Ga0255768_10393912	All Organisms → cellular organisms → Bacteria → Proteobacteria	737	Open in IMG/M
3300025151\|Ga0209645_1000162	Not Available	34783	Open in IMG/M
3300025610\|Ga0208149_1035024	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1357	Open in IMG/M
3300025630\|Ga0208004_1007344	All Organisms → Viruses → Predicted Viral	3820	Open in IMG/M
3300025630\|Ga0208004_1030141	Not Available	1598	Open in IMG/M
3300025653\|Ga0208428_1056053	Not Available	1184	Open in IMG/M
3300025674\|Ga0208162_1044630	Not Available	1523	Open in IMG/M
3300025674\|Ga0208162_1060383	All Organisms → Viruses → Predicted Viral	1234	Open in IMG/M
3300025687\|Ga0208019_1210411	Not Available	502	Open in IMG/M
3300025751\|Ga0208150_1002425	Not Available	7063	Open in IMG/M
3300025751\|Ga0208150_1066056	Not Available	1215	Open in IMG/M
3300025759\|Ga0208899_1001474	Not Available	16598	Open in IMG/M
3300025759\|Ga0208899_1099249	Not Available	1091	Open in IMG/M
3300025769\|Ga0208767_1274411	Not Available	510	Open in IMG/M
3300025810\|Ga0208543_1071665	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium TMED211	839	Open in IMG/M
3300025816\|Ga0209193_1006760	All Organisms → Viruses → Predicted Viral	4404	Open in IMG/M
3300025818\|Ga0208542_1024375	All Organisms → cellular organisms → Bacteria → Proteobacteria	2017	Open in IMG/M
3300034374\|Ga0348335_161229	Not Available	598	Open in IMG/M
3300034375\|Ga0348336_099190	Not Available	993	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	89.55%
Freshwater	Environmental → Aquatic → Freshwater	4.48%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	4.48%
Sediment	Environmental → Aquatic → Sediment	1.49%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	49.25%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	26.12%
Unclassified	Environmental → Aquatic → Marine → Unclassified	5.97%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	4.48%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	4.48%
River	Environmental → Aquatic → Freshwater → River	3.73%
Oceanic	Environmental → Aquatic → Marine → Oceanic	1.49%
Pelagic	Environmental → Aquatic → Marine → Pelagic	1.49%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.49%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.75%
Strait	Environmental → Aquatic → Marine → Strait	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	49.25%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	26.12%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	5.97%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	4.48%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	3.73%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	2.24%
Epilimnion	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion	2.24%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	1.49%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	1.49%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.49%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.75%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	44.03%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	26.12%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	5.97%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	4.48%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	3.73%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	3.73%
Pond Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water	2.24%
Saline Water And Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion → Saline Water And Sediment	2.24%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	1.49%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	1.49%
Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment	1.49%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	0.75%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	0.75%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	0.75%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000116	Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010	Environmental	Open in IMG/M
3300002483	Marine viral communities from the Pacific Ocean - ETNP_6_30	Environmental	Open in IMG/M
3300004097	Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - OSD3 (Helgoland) metaG	Environmental	Open in IMG/M
3300005512	Saline surface water microbial communities from Etoliko Lagoon, Greece - halocline_water	Environmental	Open in IMG/M
3300006025	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNA	Environmental	Open in IMG/M
3300006026	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNA	Environmental	Open in IMG/M
3300006027	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNA	Environmental	Open in IMG/M
3300006637	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNA	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300006810	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01	Environmental	Open in IMG/M
3300006868	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNA	Environmental	Open in IMG/M
3300006919	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21	Environmental	Open in IMG/M
3300007234	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNA	Environmental	Open in IMG/M
3300007236	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_>0.8_DNA	Environmental	Open in IMG/M
3300007344	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4	Environmental	Open in IMG/M
3300007345	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30	Environmental	Open in IMG/M
3300007346	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31	Environmental	Open in IMG/M
3300007539	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG	Environmental	Open in IMG/M
3300007540	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG	Environmental	Open in IMG/M
3300007541	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG	Environmental	Open in IMG/M
3300007640	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28	Environmental	Open in IMG/M
3300008012	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_DNA	Environmental	Open in IMG/M
3300009000	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MG	Environmental	Open in IMG/M
3300009001	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MG	Environmental	Open in IMG/M
3300009071	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405	Environmental	Open in IMG/M
3300009124	Marine sediment microbial communities from methane seeps within Hudson Canyon, US Atlantic Margin - Hudson Canyon PC-16 72 cmbsf	Environmental	Open in IMG/M
3300010297	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_20_0.8_DNA	Environmental	Open in IMG/M
3300010368	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_DNA	Environmental	Open in IMG/M
3300013010	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.8_DNA	Environmental	Open in IMG/M
3300017697	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)	Environmental	Open in IMG/M
3300017720	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23	Environmental	Open in IMG/M
3300017949	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017950	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG (megahit assembly)	Environmental	Open in IMG/M
3300017951	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017952	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017956	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017962	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071404AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017964	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071410BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017967	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017968	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071409AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018415	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011508AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018416	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018418	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101403AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018421	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018423	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071413AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018424	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018426	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101402AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018428	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101404AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300019280	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071401AT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019708	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? BRC_2-3_MG	Environmental	Open in IMG/M
3300019756	Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW6Sep16_MG	Environmental	Open in IMG/M
3300019765	Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW13Sep16_MG	Environmental	Open in IMG/M
3300021379	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO247	Environmental	Open in IMG/M
3300021958	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27D	Environmental	Open in IMG/M
3300021959	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13D	Environmental	Open in IMG/M
3300021960	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9D	Environmental	Open in IMG/M
3300022063	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v2)	Environmental	Open in IMG/M
3300022183	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (v3)	Environmental	Open in IMG/M
3300022187	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v3)	Environmental	Open in IMG/M
3300022200	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v3)	Environmental	Open in IMG/M
3300022934	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG	Environmental	Open in IMG/M
3300023116	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG	Environmental	Open in IMG/M
3300023175	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101402AT metaG	Environmental	Open in IMG/M
3300023180	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG	Environmental	Open in IMG/M
3300025151	Marine viral communities from the Pacific Ocean - ETNP_6_30 (SPAdes)	Environmental	Open in IMG/M
3300025610	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025630	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025653	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025674	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025687	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025751	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025759	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (SPAdes)	Environmental	Open in IMG/M
3300025769	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (SPAdes)	Environmental	Open in IMG/M
3300025810	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025816	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330 (SPAdes)	Environmental	Open in IMG/M
3300025818	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025828	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300034374	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v4)	Environmental	Open in IMG/M
3300034375	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30 (v4)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
DelMOSpr2010_100119812	3300000116	Marine	MEGFFEIFNQAVDSGGLELILAATGMGAAVPSVLLYKKMRKAKKLKEQLLG*
DelMOSpr2010_100564161	3300000116	Marine	MELFNAIVDSGGLELILAATGMGAAIPAVVAYKRI
DelMOSpr2010_101382231	3300000116	Marine	DSGGLELILAATGMGAAVPGVLLYKKIRKAKKLKEQLLG*
DelMOSpr2010_101393453	3300000116	Marine	MEGFLEIFNQAVDSGGLELILTATGMTAAIPGVLIYKKMRKAKKLKEQLLG*
DelMOSpr2010_101893172	3300000116	Marine	MEGFLEIFNQAVDSGGLELILAATGMGAAVPGVLLYKKIRKAKKLKEQLLG*
JGI25132J35274_10096855	3300002483	Marine	MDLLNSIIDSGGLELFLAATGMGAAVPAVVFYKRMRKAKKMKEQIFG*
Ga0055584_1010164403	3300004097	Pelagic Marine	MEGFLEIFNQAVDSGGLELILAATGMGAAVPGVLLYKKIRKAKKLKEQLTSL*
Ga0074648_10045368	3300005512	Saline Water And Sediment	MELFNAIIDSGGLELILAATGMGAAIPGIVLYKKIRKAKKLKEQILG*
Ga0074648_10672982	3300005512	Saline Water And Sediment	MELFNAIIDSGGVELILAATGMGAAIPAVVMYKKIRKAKQLKEKILG*
Ga0074648_11711331	3300005512	Saline Water And Sediment	MEGFLEIFNQAVDSGGLELILAATGMGAAVPGVLLYKKIRKAKKMKEQLTGL*
Ga0075474_100007156	3300006025	Aqueous	MELFNAIIDSGGVELILAATGMGAAIPAVVMYKKIRKAKKLKEQILG*
Ga0075474_100113012	3300006025	Aqueous	MEGFLEIFNQAVDSGGLELILAATGMGAAVPGVLLYKKMRKAKKLKEQLLG*
Ga0075474_101302911	3300006025	Aqueous	MEGFLEIFNQAVDSGGLELILAATGMTAVIPGVLVYKKMRKAKKLKEQLTSL*
Ga0075478_100211502	3300006026	Aqueous	MELFNAIIDSGGLELILAATGMGAAIPAVVMYKKIRKAKKLKEQILG*
Ga0075462_100412562	3300006027	Aqueous	MEGFLEIFNQAVDSGGLELILAATGMTAAIPGVLVYKKIRKAKKLKEQLTSL*
Ga0075462_100709702	3300006027	Aqueous	MEIFNAIIDSGGLELILAATGMGAAIPAVVMYKKIRKAKKLKEQILG*
Ga0075462_101689822	3300006027	Aqueous	MEGFLEIFNQAVDSGGLELILAATGMGAAIPSVLVYKKIRRAKKLKEQLLG*
Ga0075461_100166872	3300006637	Aqueous	MELFNAIIDSGGIELILAATGMGAAVPAVVMYKRMRKAKKMKEQILG*
Ga0075461_100333395	3300006637	Aqueous	MEGFLEIFNQAVDSGGLELILAATGMGAAVPGVLLYKKIRKAKKLKEQLTGL*
Ga0075461_101262312	3300006637	Aqueous	MELFNAIIDSGGVELILAATGMGAAIPAVVMYKKIRKAKKLKEQLLG*
Ga0075461_102089272	3300006637	Aqueous	MEGFLEIFNQAVDSGGLELILAATGMTAAIPGVLVYKKIRKAKKLKEQLLG*
Ga0075461_102378991	3300006637	Aqueous	LELILAATGMGAAIPAVVMYKKIRKAKKLKEQILG*
Ga0075461_102400512	3300006637	Aqueous	MELFNAIIDSGGVELILAATGMGAAVPAVVFYKRMRKAKQLKEKILG*
Ga0070749_100873712	3300006802	Aqueous	MEGFLEIFNQAVDSGGLELILAATGMSAAVPGVLLYKKIRKAKKLKEQLLG*
Ga0070749_106098812	3300006802	Aqueous	MELFNSIIDSGGVELILAATGMGAAIPAVVMYKKIRKAKKLKEQILG*
Ga0070749_106942651	3300006802	Aqueous	MEGFLEIFNQAVDSGGLELVLAATGMGAAVPGVLLYKKIRKAKKLKEQLLG*
Ga0070749_107498022	3300006802	Aqueous	MEGFLEIFNQAVDSGGLELILTATGMTAAIPGVLIYKKIRKAKKLKEQLTSL*
Ga0070749_107947592	3300006802	Aqueous	MELFNAIIDSGGLELILAATGMGAAIPAVVMYKKIRKAKKLKE
Ga0070754_103130562	3300006810	Aqueous	MELFNSIIDSGGLELILAATGMGAAIPGIVRYKKIRKAKKLKEQILG*
Ga0070754_103147462	3300006810	Aqueous	RLLELLMELFNAIIDSGGIELILAATGMGAAVPAVVMYKRMRKAKKMKEQILG*
Ga0075481_100773122	3300006868	Aqueous	LFNAIIDSGGIELILAATGMGAAVPAVVMYKRMRKAKKMKEQILG*
Ga0070746_103263462	3300006919	Aqueous	MELFNAIIDSGGVELILAATGMGAAIPGIVLYKKIRKAKQLKEKILG*
Ga0075460_102704821	3300007234	Aqueous	MELFNTILDSGGVELILAATGMGAAIPGIVLYKKIRKAKQLKEKILG*
Ga0075463_102634492	3300007236	Aqueous	MEGFLEIFNQAVDSGGLELILAATGMTAAIPGVLVYKKIRKAKKLKEKLTSL*
Ga0070745_13419782	3300007344	Aqueous	FGVIKMEGFLEIFNQAVDSGGLELILAATGMGAAVPGVLLYKKIRKAKKLKEQLLG*
Ga0070752_12730572	3300007345	Aqueous	MEGFLEIFNQAVDSGGLELILAATGMGAAVPGVLFYKKIRKAKKLKEQLTGL*
Ga0070753_13097882	3300007346	Aqueous	MEGFLEIFNQAVDSGGLELVLAATGMGAAVPGVLLYKKIRKAK
Ga0099849_11014732	3300007539	Aqueous	MELFNAIIDSGGVELILAATGMGAAIPGIVLYKKIRKAKKLKEQILG*
Ga0099849_11183362	3300007539	Aqueous	MELFNAIIDSGGLELILAATGMGAAIPGIVLYKKIRKAKKLKEKILG*
Ga0099849_11604222	3300007539	Aqueous	MLELLMELFNAIIDSGGLELILAATGMGAAIPAVVMYKKIRKAKKLKEQILG*
Ga0099849_13373401	3300007539	Aqueous	MELFNAIIDSSGVELILAATGMGAAIPAVVMYKKIRKAKQLKEKILG*
Ga0099849_13392711	3300007539	Aqueous	MEGFLEIFNQAVDSGGLELILAATGMGAAIPSVLVYKKIRKAKKLKEQLTGL*
Ga0099847_11479523	3300007540	Aqueous	MEGFLEIFNQAVDSGGLELILAATGMGAAVPGVLLYKKMRKAKKLKEQLTSL*
Ga0099848_11485091	3300007541	Aqueous	TRQIRLLELLMELFNTIIDSGGLELILAATGMGAAIPAVVMYKKIRKAKKLKEQILG*
Ga0070751_13454952	3300007640	Aqueous	MELFNAIIDSGGIELILAATGMGAAVPAVVMYKRMR
Ga0070751_13615732	3300007640	Aqueous	MELFNSIIDSGGLELILAATGMGAAIPGIVLYKKIRKAKKLKEQILG*
Ga0075480_102420872	3300008012	Aqueous	MELFNSIIDSGGLELILAATGMGAAVPAVVMYKRMRKAKKMKEQILG*
Ga0102960_10482812	3300009000	Pond Water	MELFNAIIDSGGVELILAATGMGAAVPAVVLYKRMRKAKKMKEEILG*
Ga0102960_11858213	3300009000	Pond Water	MEGFLEIFNQAVDSGGLELILAATGMGAAVPGVLFYKKIRKAKKLKEQLLG*
Ga0102963_10097222	3300009001	Pond Water	MELFNAIIDSGGLELILAATGMGAAIPGIVLYKKIRKAKQLKEKILG*
Ga0115566_107172272	3300009071	Pelagic Marine	MEIFNAIIDSGGVELILAATGMGAAVPAVVMYKRMRKAKKMKEQILG*
Ga0118687_100041816	3300009124	Sediment	MELFNSIIDSGGLELILAATGMGAAIPAVVMYKKIRKAKQLKEKILG*
Ga0118687_102812202	3300009124	Sediment	MEGFLEIFNQAVDSGGLELILTATGMTAAIPGVLFYKKMRKAKKLKEQLLG*
Ga0129345_10555731	3300010297	Freshwater To Marine Saline Gradient	MEGFLEIFNQAVDSGGLELILTATGMTAAIPGVLVYKKIRKAKKLKEQLTSL*
Ga0129345_11091373	3300010297	Freshwater To Marine Saline Gradient	MEGFLEIFNQAVDSGGLELILAATGMTAAIPGVLVYKKMRKAKKLKEQLTSL*
Ga0129345_11735412	3300010297	Freshwater To Marine Saline Gradient	MEIFNAIIDSGGVELILAATGMGAVIPAVVMYKKIRKAKQLKEKILG*
Ga0129324_101549802	3300010368	Freshwater To Marine Saline Gradient	FGVIKMEGFLEIFNQAVDSGGLELILAATGMGAAVPGVLLYKKMRKAKKLKKQLLG*
Ga0129327_100960775	3300013010	Freshwater To Marine Saline Gradient	MEGFLEIFNQAVDSGGLELILAATGMTAAIPGVLVYKKIRKAKKLKE
Ga0180120_103423181	3300017697	Freshwater To Marine Saline Gradient	EIFNQAVDSGGLELILAATGMGAAVPGVLLYKKMRKAKKLKEQLTSL
Ga0181383_11248111	3300017720	Seawater	MEGFLEIFNQAVDSGGLEFILAATGMTAAIPGVLVYKKIRKAKKLKEQLTSL
Ga0181584_104350101	3300017949	Salt Marsh	MEIFNAIIDSGGVELILAATGMGAAVPAVVMYKRMRKAKKMKEEILG
Ga0181584_105016062	3300017949	Salt Marsh	MDLFNSIIDSGGLELILAATGMGAAIPGIVLYKKIRKAKKLKEQILG
Ga0181607_105404083	3300017950	Salt Marsh	MELFNAIIDSGGVELILAATGMGAAVPAVVLYKRMRKAKKMKE
Ga0181577_100091409	3300017951	Salt Marsh	MELFNAIIDSGGVELILAATGMGAAIPGIVLYKKIRKAKKLKEQILG
Ga0181577_102240971	3300017951	Salt Marsh	MEGFLEIFNQAVDSGGLELILAATGMGAAVPGVLLYKKMRKAKKLKEQLLG
Ga0181577_103039761	3300017951	Salt Marsh	MEGFLEIFNQAVDSGGLELILAATGMTAAIPGVLVYKK
Ga0181577_107703791	3300017951	Salt Marsh	MEIFDTLIDSGGLELFLAATGMGAAVPAVVFYKRMRKAKKMKEQILG
Ga0181577_108473842	3300017951	Salt Marsh	MELFNAIIDSGGVELILAATGMGAAIPAVVMYKKIRKAKQLKEKILG
Ga0181583_107063241	3300017952	Salt Marsh	MEGFLEFFNQAVDSGGLELILAATGMGAAVPGVLFYKKIRK
Ga0181583_108344362	3300017952	Salt Marsh	MEGFLEIFNQAVDSGGLELILAATGMGAAVPGVLLYKKIRKAKKLKEQLLG
Ga0181580_104462812	3300017956	Salt Marsh	MEGFLEIFNQAVDSGGLELILAATGMTAAIPGVLVYKKIRKAKKLKEQLTSL
Ga0181581_105042642	3300017962	Salt Marsh	MELFNAIIDSGGLELILAATGMGAAIPAVVMYKKIRKAKQLKEKILG
Ga0181581_106557622	3300017962	Salt Marsh	MELFNAIIDSGGVELILAATGMGAAIPGIVLYKKIRKAKKMKEQILG
Ga0181589_105858212	3300017964	Salt Marsh	MELFNAIIDSGGLELILAATGMGAAIPAVVMYKKIRKAKKLKEQILG
Ga0181590_100658826	3300017967	Salt Marsh	MEGFLEIFNQAVDSGGLELILAATGMGAAVPGVLL
Ga0181590_107197033	3300017967	Salt Marsh	MEGFLEIFNQAVDSGGLELILAATGMTAAIPGVLVYKKMRKA
Ga0181587_105084572	3300017968	Salt Marsh	MEIFNAIIDSGGVELILAATGMGAAVPAVVFYKRMRKAKKMKEQILG
Ga0181587_107024101	3300017968	Salt Marsh	MEGFLEIFNQAVDSGGLELILAATGMTAAIPGVLVYKKIRK
Ga0181559_106750542	3300018415	Salt Marsh	MELFNAIIDSGGVELILAATGMGAAVPAVVLYKRMRKAKKMKEEILG
Ga0181553_101330393	3300018416	Salt Marsh	MEGFLEILNQAVDSGGLELILAATGMTAAIPGVLVYKKMRKAKKLKEQLTSL
Ga0181567_108164102	3300018418	Salt Marsh	MELFNAIIDSGGVELILAATGMGAAIPAVVMYKKIRKAKKLKETLLG
Ga0181592_110981621	3300018421	Salt Marsh	MEIFNAIIDSGGVELILAATGMGAAIPGIVLYKKIRKAKKLKEQILG
Ga0181593_111349152	3300018423	Salt Marsh	MEGFLEIFNQAVDSGGLELILAATGMTGAMPGVLVYKKIRKAKKLKEQLTSL
Ga0181591_101820182	3300018424	Salt Marsh	MEGFLEIFNQAVDSGGLELILAATGITAAIPGVLVYKKMRKAKKLKEQLTSL
Ga0181591_109619132	3300018424	Salt Marsh	MEGFLEFFNQAVDSGGLELILAATGMGAAVPGVLFYKKIRKAKKLKEQLLG
Ga0181566_106373531	3300018426	Salt Marsh	MEGFFEIFNQAVDSGGLELILAATGMGAAVPGVLLYKK
Ga0181566_106938002	3300018426	Salt Marsh	LELLMELFNAIIDSGGLELILAATGMGAAIPAVVMYKKIRKAKQLKEKILG
Ga0181568_109346132	3300018428	Salt Marsh	MEGFLEIFNQAVDSGGLELILAATGMTAAIPGVLVYKKIRKAKKLKEQLLG
Ga0181568_113409352	3300018428	Salt Marsh	MLELLMEIFNTLIDSGGLELFLAATGMGAAVPAVVFYKRMRKAKKMKEQILG
Ga0182068_15825041	3300019280	Salt Marsh	RQIRLLELLMELFNAIIDSGGVELILAATGMGAAIPAVVMYKKIRKAKQLKEKILG
Ga0194016_10136031	3300019708	Sediment	IFNQAVDSGGLELILAATGMTAAIPGVLVYKKMRKAKKLKEQLLG
Ga0194023_10190112	3300019756	Freshwater	MEGFLEIFNQAVDSGGLELILAATGMGAAVPGVLLYKKIRKAKRLKEQLLG
Ga0194023_10276093	3300019756	Freshwater	MEIFNAIIDSGGLELILAATGMGAAIPGIVLYKKIRKAKKLKEQILG
Ga0194024_10005282	3300019765	Freshwater	MLELLMEIFNAIIDSGGVELILAATGMGAAVPAVVFYKRMRKAKKMKEQILG
Ga0194024_10364752	3300019765	Freshwater	MELFNAIIDSGGVELILAATGMGAVIPGVVLYKKIRKAKKLKEQILG
Ga0194024_10375953	3300019765	Freshwater	MEGFLEIFNQAVDSGGLELILAATGMTAAIPGVLVYKKMRKAKKLKEQLTSL
Ga0213864_101554292	3300021379	Seawater	MEGFLEIFNQAVDSGGLELILAATGMTAAIPGVLVYKKIRKAKKLKEAITGG
Ga0222718_100088672	3300021958	Estuarine Water	MEGFLEIFNQAVDSGGLELILTATGMTAAIPGVLIYKKIRKAKKLKEQLTGL
Ga0222718_100091333	3300021958	Estuarine Water	MEGFLEIFNQAVDSGGLELILAATGMGAAVPGLLLYKKIRKAKKLKEQLTSL
Ga0222718_104882152	3300021958	Estuarine Water	MEGFLEIFNQAVDSGGLELILAATGMGAAVPGVLLYKKIRKAKKLKEQLTSL
Ga0222716_100175718	3300021959	Estuarine Water	MELFNSIIDSGGLELILAATGMGAAVPAVVFYKKIRKAKQLKEKILG
Ga0222716_103845323	3300021959	Estuarine Water	MEGFLEIFNQAVDSGGLELILAATGMGAAVPGVLFYKKMRKAKKLKEQLLG
Ga0222715_100092362	3300021960	Estuarine Water	MDLLNSIIDSGGLELILAATGMGAAIPGIVLYKKIRKAKQLKEKILG
Ga0222715_100180343	3300021960	Estuarine Water	MELFNAIIDSGGVELILAATGMGAAIPAVVMYKKIRKAKKLKEQILG
Ga0222715_100244112	3300021960	Estuarine Water	MDLLNSIIDSGGLELILAATGMGAAVPAVVMYKRIRKAKQLKEKILG
Ga0212029_10264023	3300022063	Aqueous	MEGFLEIFNQAIDSGGLELVLAATGMGAAVPGVLLYKKI
Ga0196891_10753742	3300022183	Aqueous	MELFNAIVDSGGLELILAATGMGAAIPAVVAYKRIRKAKET
Ga0196899_11441933	3300022187	Aqueous	MELFNAIVDSGGLELILAATGMGAAIPAVVAYKRIRKAKE
Ga0196901_10090957	3300022200	Aqueous	MEGFLEIFNQAVDSGGLELVLAATGMGAAVPGVLLYKKIRKAKKLKEQLLG
Ga0255781_102915061	3300022934	Salt Marsh	DSGGLELILAATGMGAAIPGIVLYKKIRKAKKLKEQILG
Ga0255781_104605971	3300022934	Salt Marsh	MEIFNAIIDSGGVELILAATGMGAAIPGIVLYKKIRKAKKLKEQ
Ga0255751_103799922	3300023116	Salt Marsh	SGGLELILAATGMGAAVPGVLLYKKIRKAKKLKEQLLG
Ga0255777_106143981	3300023175	Salt Marsh	MELFNSIIDSGGLELILAATGMGAAIPGIVLYKKIRKAKKLKEQILG
Ga0255768_103939122	3300023180	Salt Marsh	AVDSGGLELILAATGMGAAVPGVLLYKKIRKAKKLKEQLLG
Ga0209645_100016232	3300025151	Marine	MDLLNSIIDSGGLELFLAATGMGAAVPAVVFYKRMRKAKKMKEQIFG
Ga0208149_10350242	3300025610	Aqueous	MEGFLEIFNQAVDSGGLELILAATGMTAVIPGVLVYKKMRKAKKLKEQLTSL
Ga0208004_10073441	3300025630	Aqueous	MEIFNAIIDSGGLELILAATGMGAAIPAVVMYKKIRKAKKLKEQILG
Ga0208004_10301411	3300025630	Aqueous	MEGFLEIFNQAVDSGGLELILAATGMGAAVPGVLLYKKIRKAKKLKEQLTGL
Ga0208428_10560532	3300025653	Aqueous	MEWLDMINSAVDSGGLELILAATGMGAAIPGIVLYKKIRKAKKLKEQILG
Ga0208428_10866261	3300025653	Aqueous	MELFNAIIDSGGVELILAATGMGAAIPAVVMYKKIR
Ga0208162_10446302	3300025674	Aqueous	MELFNAIIDSGGLELILAATGMGAAIPGIVLYKKIRKAKKLKEKILG
Ga0208162_10603831	3300025674	Aqueous	MELFNAIIYSGGVELILAATGMGAAIPAVVMYKKIRKAKQLKEKILG
Ga0208019_12104111	3300025687	Aqueous	MEGFLEIFNQAVDSGGLELILAATGMGAAVPGVLLYKKIRKAKKLKEQLL
Ga0208150_10024251	3300025751	Aqueous	MELFNAIIDSGGIELILAATGMGAAVPAVVMYKRMRKAKKMKEQILG
Ga0208150_10660562	3300025751	Aqueous	MELFNAIIDSGGLELILAATGMGAAIPGIVLYKKIRKAKKLKETLLG
Ga0208899_10014742	3300025759	Aqueous	MEGFLEIFNQAVDSGGLELILAATGMSAAVPGVLLYKKIRKAKKLKEQLLG
Ga0208899_10992493	3300025759	Aqueous	MELFNAIIDSGGVELILAATGMGAAVPAVVFYKRMRKAKQLKEKILG
Ga0208767_12744112	3300025769	Aqueous	SGGLELILAATGMGAAIPAVVMYKKIRKAKQLKEKILG
Ga0208543_10716651	3300025810	Aqueous	LELILAATGMTAAIPGVLVYKKIRKAKKLKEQLTSL
Ga0209193_100676011	3300025816	Pelagic Marine	MEIFNALIDSGGLELFLAATGMGAAVPAVVFYKRMRKAKKMKEQIFG
Ga0208542_10243752	3300025818	Aqueous	MELFNAIIDSGGVELILAATGMGAAIPAVVMYKKIRKAKKLKEQLLG
Ga0208547_10072451	3300025828	Aqueous	MELFNAIIDSGGVELILAATGMGAAIPGIVLYKKIRK
Ga0348335_161229_338_481	3300034374	Aqueous	MELFNAIIDSGGLELILAATGMGAAIPGIVLYKKIRKAKKLKETLVG
Ga0348336_099190_113_256	3300034375	Aqueous	MELFNAIIDSGGLELILAATGMGAAIPGIVLYKKIRKAKKLKEQILG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F058956

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences