Metagenome / Metatranscriptome Family F058967

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F058967
Family Type	Metagenome / Metatranscriptome
Number of Sequences	134
Average Sequence Length	61 residues
Representative Sequence	EFKKELEGAGFKILFDELEEHDSEVSWKGEGRTGQVALREECGESDKTYVHITNRPA
Number of Associated Samples	118
Number of Associated Scaffolds	134

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.29 %
% of genes near scaffold ends (potentially truncated)	95.52 %
% of genes from short scaffolds (< 2000 bps)	91.04 %
Associated GOLD sequencing projects	115
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (83.582 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (26.866 % of family members)
Environment Ontology (ENVO)	Unclassified (38.060 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 8.24% β-sheet: 36.47% Coil/Unstructured: 55.29%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 134 Family Scaffolds
PF00353	HemolysinCabind	35.82
PF02156	Glyco_hydro_26	13.43
PF00198	2-oxoacid_dh	10.45
PF13450	NAD_binding_8	4.48
PF00892	EamA	3.73
PF01694	Rhomboid	2.99
PF02817	E3_binding	2.24
PF04029	2-ph_phosp	2.24
PF13229	Beta_helix	1.49
PF00248	Aldo_ket_red	0.75
PF07992	Pyr_redox_2	0.75
PF13442	Cytochrome_CBB3	0.75
PF04909	Amidohydro_2	0.75

COG ID	Name	Functional Category	% Frequency in 134 Family Scaffolds
COG4124	Beta-mannanase	Carbohydrate transport and metabolism [G]	13.43
COG0508	Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component	Energy production and conversion [C]	12.69
COG2045	Phosphosulfolactate phosphohydrolase or related enzyme	Coenzyme transport and metabolism [H]	4.48
COG0705	Membrane-associated serine protease, rhomboid family	Posttranslational modification, protein turnover, chaperones [O]	2.99

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	83.58 %
Unclassified	root	N/A	16.42 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	83.58 %
Unclassified	root	N/A	16.42 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	83.58 %
Unclassified	root	N/A	16.42 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	78.36 %
Unclassified	root	N/A	16.42 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	77.61 %
Unclassified	root	N/A	16.42 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	50.75 %
Unclassified	root	N/A	16.42 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	2.99 %
Rubrobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria	0.75 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	50.00 %
Unclassified	root	N/A	16.42 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2.99 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.75 %
Rubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales	0.75 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	50.00 %
Unclassified	root	N/A	16.42 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	2.99 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.75 %
Rubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	0.75 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	50.00 %
Unclassified	root	N/A	16.42 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	2.99 %
Actinoplanes	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	0.75 %
Rubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter	0.75 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	50.00 %
Unclassified	root	N/A	16.42 %
unclassified Solirubrobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter	2.99 %
Actinoplanes toevensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes toevensis	0.75 %
Rubrobacter xylanophilus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter xylanophilus	0.75 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	50.00 %
Unclassified	root	N/A	16.42 %
Solirubrobacter sp. URHD0082	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	2.99 %
Actinoplanes toevensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes toevensis	0.75 %
Rubrobacter xylanophilus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter xylanophilus	0.75 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2065487018\|GPINP_F5MS3JC02HLSKX	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	516	Open in IMG/M
2124908009\|FWIRA_GRAM18402JRJ6Q	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	523	Open in IMG/M
3300000956\|JGI10216J12902_101098965	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	648	Open in IMG/M
3300004114\|Ga0062593_100980275	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	864	Open in IMG/M
3300004479\|Ga0062595_100590302	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	862	Open in IMG/M
3300004480\|Ga0062592_100006911	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	4191	Open in IMG/M
3300005093\|Ga0062594_100425336	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	1086	Open in IMG/M
3300005161\|Ga0066807_1040601	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	528	Open in IMG/M
3300005168\|Ga0066809_10006247	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2120	Open in IMG/M
3300005172\|Ga0066683_10370214	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	888	Open in IMG/M
3300005334\|Ga0068869_101687641	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	565	Open in IMG/M
3300005341\|Ga0070691_10993729	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	523	Open in IMG/M
3300005343\|Ga0070687_100391780	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	908	Open in IMG/M
3300005354\|Ga0070675_101164810	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	709	Open in IMG/M
3300005364\|Ga0070673_101098356	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	743	Open in IMG/M
3300005364\|Ga0070673_101160931	Not Available	723	Open in IMG/M
3300005436\|Ga0070713_100208161	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1769	Open in IMG/M
3300005440\|Ga0070705_100035003	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2812	Open in IMG/M
3300005440\|Ga0070705_100323314	Not Available	1115	Open in IMG/M
3300005440\|Ga0070705_101382732	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	586	Open in IMG/M
3300005444\|Ga0070694_101173174	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	643	Open in IMG/M
3300005445\|Ga0070708_101945893	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	545	Open in IMG/M
3300005450\|Ga0066682_10387453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes toevensis	897	Open in IMG/M
3300005457\|Ga0070662_100239889	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1453	Open in IMG/M
3300005529\|Ga0070741_10905679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	762	Open in IMG/M
3300005545\|Ga0070695_100127536	All Organisms → cellular organisms → Bacteria	1749	Open in IMG/M
3300005549\|Ga0070704_101699688	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	583	Open in IMG/M
3300005559\|Ga0066700_10536986	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	815	Open in IMG/M
3300005569\|Ga0066705_10615959	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	664	Open in IMG/M
3300005764\|Ga0066903_101756277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1183	Open in IMG/M
3300005764\|Ga0066903_105848608	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	645	Open in IMG/M
3300005873\|Ga0075287_1038527	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	637	Open in IMG/M
3300006046\|Ga0066652_101446971	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	640	Open in IMG/M
3300006046\|Ga0066652_102097908	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	500	Open in IMG/M
3300006847\|Ga0075431_101203050	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	720	Open in IMG/M
3300006854\|Ga0075425_101629193	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	727	Open in IMG/M
3300006881\|Ga0068865_100043767	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3061	Open in IMG/M
3300007076\|Ga0075435_100323740	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1319	Open in IMG/M
3300009012\|Ga0066710_103860899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	562	Open in IMG/M
3300009094\|Ga0111539_11176932	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	891	Open in IMG/M
3300009098\|Ga0105245_12863551	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	535	Open in IMG/M
3300009137\|Ga0066709_103492358	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	570	Open in IMG/M
3300009147\|Ga0114129_12003586	Not Available	700	Open in IMG/M
3300009147\|Ga0114129_12612869	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	602	Open in IMG/M
3300009156\|Ga0111538_12609834	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	633	Open in IMG/M
3300009162\|Ga0075423_11740460	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	671	Open in IMG/M
3300009553\|Ga0105249_12630675	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300009792\|Ga0126374_11233847	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	600	Open in IMG/M
3300010337\|Ga0134062_10737490	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	521	Open in IMG/M
3300010366\|Ga0126379_12985292	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	566	Open in IMG/M
3300010373\|Ga0134128_10830136	Not Available	1024	Open in IMG/M
3300010375\|Ga0105239_12069053	Not Available	661	Open in IMG/M
3300010400\|Ga0134122_11786092	Not Available	646	Open in IMG/M
3300010403\|Ga0134123_11315043	Not Available	759	Open in IMG/M
3300011003\|Ga0138514_100002254	All Organisms → cellular organisms → Bacteria	2519	Open in IMG/M
3300011412\|Ga0137424_1135404	All Organisms → cellular organisms → Bacteria → Terrabacteria group	521	Open in IMG/M
3300012008\|Ga0120174_1114551	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	656	Open in IMG/M
3300012198\|Ga0137364_11190381	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	571	Open in IMG/M
3300012206\|Ga0137380_10551152	Not Available	1012	Open in IMG/M
3300012285\|Ga0137370_10405913	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	826	Open in IMG/M
3300012356\|Ga0137371_10919585	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	665	Open in IMG/M
3300012900\|Ga0157292_10339861	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	551	Open in IMG/M
3300012907\|Ga0157283_10267267	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	577	Open in IMG/M
3300012907\|Ga0157283_10386433	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	516	Open in IMG/M
3300012911\|Ga0157301_10048236	Not Available	1087	Open in IMG/M
3300012915\|Ga0157302_10541392	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	511	Open in IMG/M
3300012948\|Ga0126375_10956795	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter xylanophilus	693	Open in IMG/M
3300013765\|Ga0120172_1119345	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	634	Open in IMG/M
3300014056\|Ga0120125_1066952	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	807	Open in IMG/M
3300014823\|Ga0120170_1114709	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	538	Open in IMG/M
3300014968\|Ga0157379_10926520	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	828	Open in IMG/M
3300018027\|Ga0184605_10179018	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	959	Open in IMG/M
3300018061\|Ga0184619_10545093	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	508	Open in IMG/M
3300018071\|Ga0184618_10004708	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3747	Open in IMG/M
3300018071\|Ga0184618_10027929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1915	Open in IMG/M
3300018072\|Ga0184635_10248023	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	705	Open in IMG/M
3300019279\|Ga0184642_1647911	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	576	Open in IMG/M
3300019356\|Ga0173481_10425358	Not Available	657	Open in IMG/M
3300019361\|Ga0173482_10601159	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	553	Open in IMG/M
3300020012\|Ga0193732_1054241	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	680	Open in IMG/M
3300020022\|Ga0193733_1132836	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	682	Open in IMG/M
3300021078\|Ga0210381_10266591	Not Available	612	Open in IMG/M
3300021344\|Ga0193719_10268520	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	719	Open in IMG/M
3300021510\|Ga0222621_1031486	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1092	Open in IMG/M
3300022756\|Ga0222622_10233474	All Organisms → cellular organisms → Bacteria	1238	Open in IMG/M
3300022756\|Ga0222622_10943467	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	633	Open in IMG/M
3300022756\|Ga0222622_11216885	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	554	Open in IMG/M
3300023072\|Ga0247799_1040581	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	756	Open in IMG/M
3300025898\|Ga0207692_11048292	Not Available	539	Open in IMG/M
3300025899\|Ga0207642_10276061	Not Available	965	Open in IMG/M
3300025915\|Ga0207693_10991480	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	642	Open in IMG/M
3300025927\|Ga0207687_11653642	Not Available	549	Open in IMG/M
3300025935\|Ga0207709_10510090	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	940	Open in IMG/M
3300025938\|Ga0207704_10331003	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1179	Open in IMG/M
3300025972\|Ga0207668_11715036	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	567	Open in IMG/M
3300026041\|Ga0207639_11491996	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	635	Open in IMG/M
3300026078\|Ga0207702_11178584	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	760	Open in IMG/M
3300027560\|Ga0207981_1096202	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	546	Open in IMG/M
3300027821\|Ga0209811_10359984	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	563	Open in IMG/M
3300028715\|Ga0307313_10036345	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1408	Open in IMG/M
3300028715\|Ga0307313_10279866	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	519	Open in IMG/M
3300028718\|Ga0307307_10022464	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1752	Open in IMG/M
3300028719\|Ga0307301_10019786	All Organisms → cellular organisms → Bacteria	1964	Open in IMG/M
3300028720\|Ga0307317_10125681	Not Available	857	Open in IMG/M
3300028721\|Ga0307315_10004244	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3482	Open in IMG/M
3300028722\|Ga0307319_10208714	Not Available	640	Open in IMG/M
3300028744\|Ga0307318_10040979	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1523	Open in IMG/M
3300028754\|Ga0307297_10001066	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	6530	Open in IMG/M
3300028755\|Ga0307316_10357004	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	538	Open in IMG/M
3300028768\|Ga0307280_10275911	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	609	Open in IMG/M
3300028771\|Ga0307320_10084162	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1198	Open in IMG/M
3300028771\|Ga0307320_10320097	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	617	Open in IMG/M
3300028778\|Ga0307288_10088989	Not Available	1112	Open in IMG/M
3300028778\|Ga0307288_10334069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	608	Open in IMG/M
3300028787\|Ga0307323_10036930	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1706	Open in IMG/M
3300028787\|Ga0307323_10075922	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1197	Open in IMG/M
3300028791\|Ga0307290_10144378	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	871	Open in IMG/M
3300028793\|Ga0307299_10047890	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1573	Open in IMG/M
3300028824\|Ga0307310_10589060	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	566	Open in IMG/M
3300028828\|Ga0307312_11150431	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	513	Open in IMG/M
3300028875\|Ga0307289_10229239	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	764	Open in IMG/M
3300028881\|Ga0307277_10017585	All Organisms → cellular organisms → Bacteria	2781	Open in IMG/M
3300028889\|Ga0247827_10514807	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	751	Open in IMG/M
3300031093\|Ga0308197_10395887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	539	Open in IMG/M
3300031093\|Ga0308197_10460356	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	512	Open in IMG/M
3300031170\|Ga0307498_10096153	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	903	Open in IMG/M
3300031820\|Ga0307473_11132394	Not Available	578	Open in IMG/M
3300031903\|Ga0307407_11203142	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	592	Open in IMG/M
3300031996\|Ga0308176_11451021	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	730	Open in IMG/M
3300032003\|Ga0310897_10307256	Not Available	727	Open in IMG/M
3300034820\|Ga0373959_0007324	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1853	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	79.85%
Host-Associated	Host-Associated	20.15%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	70.90%
Plants	Host-Associated → Plants	20.15%
Aquatic	Environmental → Aquatic	8.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	70.15%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.67%
Sediment	Environmental → Aquatic → Sediment	7.46%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.48%
Freshwater	Environmental → Aquatic → Freshwater	1.49%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	58.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.19%
Loam	Environmental → Terrestrial → Soil → Loam	10.45%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	7.46%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.48%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.48%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.49%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.75%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	41.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.19%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	7.46%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.46%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.48%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.73%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.99%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.24%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.49%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.49%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.75%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.75%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	26.87%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.21%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.97%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.97%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.73%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.99%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.99%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.99%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	2.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.99%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.24%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.24%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.24%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.49%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.49%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.49%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.49%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.49%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.75%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.75%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.75%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.75%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.75%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.75%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.75%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.75%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2065487018	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2124908009	Soil microbial communities from sample at FACE Site Metagenome WIR_Amb2	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005161	Soil and rhizosphere microbial communities from Laval, Canada - mgLPA	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005873	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_301	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006605	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011003	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015	Environmental	Open in IMG/M
3300011412	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT620_2	Environmental	Open in IMG/M
3300012008	Permafrost microbial communities from Nunavut, Canada - A39_80cm_12M	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012900	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S179-409R-1	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300013765	Permafrost microbial communities from Nunavut, Canada - A30_80cm_6M	Environmental	Open in IMG/M
3300014056	Permafrost microbial communities from Nunavut, Canada - A20_5cm_0M	Environmental	Open in IMG/M
3300014823	Permafrost microbial communities from Nunavut, Canada - A3_80cm_0M	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015209	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G3B, Proglacial river margin, by glacier terminus)	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300019279	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300020012	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s1	Environmental	Open in IMG/M
3300020022	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021510	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coex	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300023072	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S151-409C-6	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027560	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028754	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300034820	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPINP_02915990	2065487018	Soil	VKEFEAAGYKVLFEELEDHDSEVSWQGEGRTGQVALREDCDGGKIYVHITNRPV
FWIRA_06749890	2124908009	Soil	FNGSLQDAHDEFHKELKGAGYQILFDEVDAHDSEVTWKGEGRTGQVALREECGSADKIYVHITNRPA
JGI10216J12902_1010989651	3300000956	Soil	VEGYFEGSVEDAHDEYLKELKAAGYQILFEELEEHDSEVSWKSEGRSGQVALREDCGSDDKIYVHITNRPA*
Ga0062593_1009802751	3300004114	Soil	YWDGDLAEAHDEYVKEFKAAGYQILFEELEDHDSEVSWKGEGRSGQVALRDDCGGDKIYVHITNRPA*
Ga0062595_1005903023	3300004479	Soil	KELEGAGFKILFDELEEHDSEVSWEGEGRTGQVALREECGESDKTYVHITNRPE*
Ga0062592_1000069117	3300004480	Soil	NVVEGYWEGGLKDAHDEYKKELEAAGYKMLFDELEDHDSEVSWQGEGRSGQVALREECGDNDKIYVHITNRPA*
Ga0062594_1004253362	3300005093	Soil	YWKGSLKEAHDEYLKELKAVGYKILFDELEDHDSEVSWSGEGRTGQVALRDDCGGDKIYVHITNRPA*
Ga0066807_10406012	3300005161	Soil	KELQGAGFDVLFDELEDHDSEVSWKGEGRSGQVALREECGSDEKIFVHITNRPA*
Ga0066809_100062471	3300005168	Soil	FKKELQGAGFDVLFDELEDHDSEVSWKGEGRSGQVALREECGSDEKIFVHITNRPAG*
Ga0066683_103702141	3300005172	Soil	DIKEAHDEWKKELQASGYKVLFDELEEHDSEVSWKGEGRSGQVALREECGSSDKIFVHITNRPA*
Ga0068869_1016876411	3300005334	Miscanthus Rhizosphere	DAHEEFKKELQGAGFKILFDELEEHDSEVSWEGEGRTGQVALREECGENDKIYVHITNRPA*
Ga0070691_109937291	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	DAYDEYKKELEAAGFKILFDEIEEHDSEVSWEGEGRSGQVALREECGSDDKIYVHITNRPASE*
Ga0070687_1003917801	3300005343	Switchgrass Rhizosphere	EYVKEFNAAGYKVLFEELEDHDSEVSWSGEGRTGQVALRDDCGGDKIYVHITNRPA*
Ga0070675_1011648101	3300005354	Miscanthus Rhizosphere	EEFKKELQGAGFKILFDELEEHDSEVSWEGEGRTGQVALREECGDGDKTYVHITNRPE*
Ga0070673_1010983561	3300005364	Switchgrass Rhizosphere	AFKAAGYKILFDELEAPNDSEISWQGEGRSGQVALRNDCGGDKIYVHITNRPA*
Ga0070673_1011609311	3300005364	Switchgrass Rhizosphere	YFKGDVKEAHDEFEKELKGVGFDILFNELEDHDSEISWKGEGRTGQVALREECGDADKTYVHITNRAA*
Ga0070713_1002081611	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	KGDVEEAHDEYLKAFKAAGYKILFDELEAPNDSEISWQGEGRSGQVALRNDCGGDKIYVHITNRPA*
Ga0070705_1000350035	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	EGYWKGSLEDAHVEYKKDLEAAGYDIVFDELEDHDSEVSWKGEGRTGQVALREECGDSDKIYVHITNRPA*
Ga0070705_1003233142	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	GDVKEAHDEFEKELKGVGFDILFNELEDHDSEISWKGEGRTGQVALREECGDADKTYVHITNRAA*
Ga0070705_1013827322	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	LKEAHDEYLKELKAVGYKILFDELEDHDSEVSWSGEGRTGQVALRDDCGGDKIYVHITNRPA*
Ga0070694_1011731742	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	FNGDVKEAHDEWKKELEASGYKILFDELEDHDSEVSWEGEGRTGQVALREECGTPDKIWVHITNRPE*
Ga0070708_1019458932	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	SVKDAHDEYKKELQSAGYKILFDELEDHDSEVSWKGESRTGQVALREECGESDKIYVHITNRPA*
Ga0066682_103874531	3300005450	Soil	DAHDEFKKELQAAGYKILFDELEDHDSEVSWKGEGRTGQVALREECGQNDKTYVHITNRPA*
Ga0070662_1002398893	3300005457	Corn Rhizosphere	AGYKVLFEELEDHDSEVSWSGEGRTGQVALRDDCGGDKIYVHITNRPA*
Ga0070741_109056793	3300005529	Surface Soil	EFLKELKGAQFKILFNELEEHDSEISWQGEGRTGQVAMREQCGSDQKTFVHITNRAA*
Ga0070695_1001275361	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	KEAHDEFEKELKGVGFDILFNEVEDHDSEISWKGEGRTGQVALREECGDAAKTYVHITNRAA*
Ga0070704_1016996882	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	HDEYKKELEAAGYDIVFDELEDHDSEVSWKGEGRTGQVALREECGDSDKIYVHITNRPA*
Ga0066700_105369861	3300005559	Soil	AHDEYKKELQAAGYKILFDELEEHDSEVSWKGEGRTGQVALREECGQNDKTYVHITNRPA
Ga0066705_106159591	3300005569	Soil	DVKEAHDEFKKELEGAGFKILFDELEDHDSEVSWKGEGRTGQVALREECGESDKTYVHITNRPA*
Ga0066903_1017562771	3300005764	Tropical Forest Soil	EDAGFTILFDEVEDNDSEVSWKGEGRSGQVAIRNECGESDKVYIKVTNRPA*
Ga0066903_1058486082	3300005764	Tropical Forest Soil	TVQEAHDEFLKELKGAQYKILFNEVEAPNDSEISWKGEGRTGQVALRNECGESDKTYVHITNRAA*
Ga0075287_10385271	3300005873	Rice Paddy Soil	EYVKEFEAAGYKVLFEEVEDHDSEVSWQGKGRTGQVALRDDCGGDKIYVHITNRPA*
Ga0066652_1014469711	3300006046	Soil	DEWKKELQASGYKILFDELEDHDSEVSWKGEGRSGQVALREECGSSDKVYVHITNRPA*
Ga0066652_1020979082	3300006046	Soil	DEWKKELQASGYKILFDELEDHDSEVSWKGEGRSGQVALREECGSSDKIYVHITNRPA*
Ga0074057_118226302	3300006605	Soil	AHDEFKRELEAAGFTILFDELEDNDSEVSWKGQGRSGQVALRNECGSSDKVFVHIANRSG
Ga0075431_1012030502	3300006847	Populus Rhizosphere	EGSLQDAYDEYKKELEAAGFKILFDEIEEHDSEVSWEGEGRSGQVALREECGSDDKIYVHITNRPASE*
Ga0075425_1016291931	3300006854	Populus Rhizosphere	GYWEGDLEEAHDEYVKEFEAAGYKVLFEELEEHDSEVSWKGEGRTGQVALRDDCGGDKIYVHITNRPA*
Ga0068865_1000437671	3300006881	Miscanthus Rhizosphere	AAGYKVLFEELEDHDSEVSWSGEGRTGQVALRDDCGGDKIYVHITNRPA*
Ga0075435_1003237403	3300007076	Populus Rhizosphere	KELQGAGFKILFDELEEHDSEVSWEGEGRTGQVALRDECGEADKTYVHITNRPE*
Ga0066710_1038608991	3300009012	Grasslands Soil	EGFFNGDVQEAHDEYLKELKGSGYDILFNEVEAPNDSEISWKGEGRTGQVALRNECGESDKTYVHITNRPA
Ga0111539_111769323	3300009094	Populus Rhizosphere	EASGYKILFDELEDRDSEVSWQGERRSGQVALREECGDNDKIYVHITNRPA*
Ga0105245_128635511	3300009098	Miscanthus Rhizosphere	GYFNGDVKEAHDEFEKELQGAGFDILFNELEDHDSEISWKGEGRTGQVALREECGDADKTYVHITNRAA*
Ga0066709_1034923582	3300009137	Grasslands Soil	QAAGYKILFDELEDHDSEVSWKGEGRTGQVALREECGQNDKTYVHITNRPA*
Ga0114129_120035862	3300009147	Populus Rhizosphere	EEAHEEFQKELKASGYDILFDEVEAPNDSEISWKGEGRTGQVAMRNECGDSDKTYVHITNRPG*
Ga0114129_126128692	3300009147	Populus Rhizosphere	VVEGFFEGSLQDAYDEYKKELEAAGFKILFDEIEEHDSEVSWEGEGRSGQVALREECGSDDKIYVHITNRPASE*
Ga0111538_126098341	3300009156	Populus Rhizosphere	EAAGFKILFDEIEEHDSEVSWEGEGRSGQVALREECGSDDKIYVHITNRPASE*
Ga0075423_117404602	3300009162	Populus Rhizosphere	EAHDEYLKELKAVGYKILFDELEDHDSEVSWSGEGRTGQVALRDDCGGDKIYVHITNRPA
Ga0105249_126306752	3300009553	Switchgrass Rhizosphere	VPCWKIVGAAGFTILFDELEDHDSEVSWKGEGRSGQVALREECGSSDKIYVHVTNRPA*
Ga0126374_112338471	3300009792	Tropical Forest Soil	GAGYKILFNELEEHDSEVSWSGEGRSGQVAIRQECGSPDKVWIHITNRPS*
Ga0134062_107374901	3300010337	Grasslands Soil	GFFNGDVKEAHDEFKKELEGAGFTILFNELEDHDSEISWKGEGRTGQVAMREECGDSNKTYVHITNRSA*
Ga0126379_129852921	3300010366	Tropical Forest Soil	EAHDEYLKELKAAGYQILFNEDEAPNDSEISWKGEGRTGQVALRNDCNGGGKIYVHITNRPA*
Ga0134128_108301361	3300010373	Terrestrial Soil	KGVGFDILFNEVEDHDSEISWKGEGRTGQVALREECGDAAKTYVHITNRAA*
Ga0105239_120690531	3300010375	Corn Rhizosphere	FQKELKASGYDILFDEVEAPDDSEISWKGEGRTGQVAMRNECGDSDKTYVHITNRPA*
Ga0134122_117860921	3300010400	Terrestrial Soil	HDEFEKELKGVGFDILFNELEHQDSEISWKGEGRTGQVALREECGDAAKTYVHITNRAA*
Ga0134123_113150431	3300010403	Terrestrial Soil	KEAHDEFEKELKGVGFDILFNELEDHDSEISWKGEGRTGQVALREECGDADKTYVHITNRAA*
Ga0134123_131281421	3300010403	Terrestrial Soil	EGGEGYFDGDVAAAHDEFEAAIERVGFVGLFDELEEHDSEVSWRGQGRSGQVGLREECGDADRTYVRITNRPD*
Ga0138514_1000022541	3300011003	Soil	GYFHGDVKEAHDEFKKELAGAGFKILFDELEEHDSEVSWKGEGRTGQVALREECGESDKTYVHITNRPA*
Ga0137424_11354042	3300011412	Soil	LEAAGFTILFDELEEQDSEVSWEAEGRSGQVALREECGESDKIYVKVTNRPAS*
Ga0120174_11145512	3300012008	Permafrost	MSSRATSTVLSRTPHEEFEKELKASGYDILFNELEDHDSEISWKGEGRTGQVAMREECGSADKAYVHITNRPAT*
Ga0137364_111903811	3300012198	Vadose Zone Soil	ADAHDEFKKELQAAGYKILFDELEDHDSEVSWKGEGRTGQVALREECGQNDKTYVHITNRPA*
Ga0137380_105511523	3300012206	Vadose Zone Soil	EGYFNGDVKEAHDEFEKELEGAGFDVLFNELEEHDSEISWKGEGRTGQVALREECGDSDKTYVHITNRAA*
Ga0137370_104059131	3300012285	Vadose Zone Soil	EFKKELEGAGFKILFDELEEHDSEVSWKGEGRTGQVALREECGESDKTYVHITNRPA*
Ga0137371_109195851	3300012356	Vadose Zone Soil	VKEAHDEFKKELEGAGFKILFDELEEHDSEVSWQGEGRTGQVALREECGESDKTYVHITNRPA*
Ga0157292_103398611	3300012900	Soil	EGSLEDAYDEYKKELEAAGFKILFDEIEEHDSEVSWEGEGRSGQVALREECGSDDKIYVHITNRPASE*
Ga0157283_102672672	3300012907	Soil	ERVGFIVLFDEVEEHDSEVSWRGQGRSGQIGLREECGESDRTYVRITNRPD*
Ga0157283_103864331	3300012907	Soil	EFKKELQGAGYKILFDELEEHDSEVSWSGEGRTGQVALREECGDSDKTYVHITNRPA*
Ga0157301_100482362	3300012911	Soil	QKELEASGYDILFDEVEAPDDSEISWKGEGRTGQVAMRNECGDSDKTYVHITNRPA*
Ga0157302_105413921	3300012915	Soil	HDEYKKELEAAGYKMLFDELEDHDSEVSWQGEGRSGQVALREECGDNDKIYVHITNRPA*
Ga0126375_109567952	3300012948	Tropical Forest Soil	DEYVKEFEAAGYQVLFEELEEHDSEVSWKGEGRTGQVALRDDCGGDKIYVHITNRPA*
Ga0120172_11193451	3300013765	Permafrost	DEFKSAFEGAGYTVLFDELEDHDSEVSWKGQGRSGQVALREDCGSGSNRTFVHITNRPQ*
Ga0120125_10669521	3300014056	Permafrost	VEGYFNGDIKEAHDEWKKELQASGYKILFDELEDHDSEVSWQGEGRSGQVALREECGSADKIYVHITNRPA*
Ga0120170_11147091	3300014823	Permafrost	TNVVEGYFNGSVKDAHEEFEKELKASGYDILFNELEDHDSEISWKGEGRTGQVAMREECGSADKAYVHITNRPAT*
Ga0157379_109265201	3300014968	Switchgrass Rhizosphere	FNAVGYKVLFEELEDHDSEVSWSGEGRTGQVALRDDCGGDKIYVHITNRPA*
Ga0167629_11965622	3300015209	Glacier Forefield Soil	GGIQAAHDEIKAAFERAGYVVLFDEVEENDSEVAWKGQGRSGQVGLRDECGSSDRTYVRISNRPQ*
Ga0184605_101790183	3300018027	Groundwater Sediment	AGFKILFNELEEHDSEVSWEGEGRTGQVALREECGESDKTYVHITNRPE
Ga0184619_105450931	3300018061	Groundwater Sediment	AEVKAALERAGFTVLFDELEEDDSEVSWKGQGRSGQVALRKECGDSDRTFVHITNLPE
Ga0184618_100047081	3300018071	Groundwater Sediment	NVVEGYFHGDVKEAHDEFKKELEGAGFKILFDELEEHDSEVSWKGEGRTGQVALREECGESDKTYVHITNRPA
Ga0184618_100279291	3300018071	Groundwater Sediment	FNGDLQEGYGEWKKELQASGYKILFDEIEDHDSEVSWEGEGRSGQVALREECGESDKIYVHITNRPE
Ga0184635_102480231	3300018072	Groundwater Sediment	VVEGYWEGDLKEAHDEYVKEFEAAGYKVLFEEVEEHDSEVSWEGEGRTGQVALRDDCGGDKIYVHITNRPE
Ga0184642_16479112	3300019279	Groundwater Sediment	AHEGFEKELEGAGFAILFNELEDHDSEISWKGEGRTGQVAMREECGEPDKTYVHITNRPA
Ga0173481_104253582	3300019356	Soil	AHDEFEKELEGAGFDILFNELEEHDSEISWKGEGRTGQVALREECGDADKTYVHITNRAA
Ga0173482_106011592	3300019361	Soil	EVVEGYWTGDLKEAHDEYVKEFEAAGYKVLFEELEDHDSEVSWQGEGRTGQVALREECDGDKIYVHITNRPA
Ga0193732_10542411	3300020012	Soil	QGPTNVVEGYFKGDVKEAHDEFEKELKGAGFDILFNELEDHDSEISWKGEGRTGQVALREECGKADKTYVHITNRAA
Ga0193733_11328361	3300020022	Soil	KKELQGAGYKILFDELEDHDSEVSWSGEGRTGQVALREQCGDADKIYVHITNRPA
Ga0210381_102665911	3300021078	Groundwater Sediment	FEKELKGSGFDILFNELEEHDSEISWKGEGRTGQVALREECGDADKTYVHITNRAA
Ga0193719_102685202	3300021344	Soil	KELQASGYKILFDEIEDHDSEVSWEGEGRSGQVALREECGESDKIYVHITNRPE
Ga0222621_10314863	3300021510	Groundwater Sediment	KKELQASGYKILFDELEDHDSEVSWQGEGRSGQVALREECGSADKIYVHITNRPA
Ga0222622_102334741	3300022756	Groundwater Sediment	KEAHDEFEKELKGAGYSILFNELEEHDSEISWKGEGRTGQVALREECGEADKTYVHITNRAA
Ga0222622_109434671	3300022756	Groundwater Sediment	DAHDEYKKELQAAGYKILFDELEDHDSEVSWQGEGRSGQVALREECGENDKIYVHITNRP
Ga0222622_112168851	3300022756	Groundwater Sediment	EGSVKDAHDEYKKELQGAGYKILFDELEDHDSEVSWSGEGRTGQVALREQCGSDEKIYVHITNRPA
Ga0247799_10405811	3300023072	Soil	AHDEFKAGIERVGFVVLFDELEEHDSEVSWRGQGRSGQVGLRDECGDSDRTYVRITNRPD
Ga0207692_110482922	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	VKEAHDEFEKELKGVGFDILFNELEDHDSEISWKGEGRTGQVALREECGDADKTYVHITNRAA
Ga0207642_102760611	3300025899	Miscanthus Rhizosphere	YFKGDVKEAHDEFEKELKGVGFDILFNELEDHDSEISWKGEGRTGQVALREECGDADKTYVHITNRAA
Ga0207693_109914802	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	YKKELEAAGYKILFDELEDHDSEVSWQGEGRSGQVALREECGDNDKIYVHITNRPA
Ga0207687_116536421	3300025927	Miscanthus Rhizosphere	FEKELKGVGFDILFNELEHQDSEISWKGEGRTGQVALREECGDADKTYVHITNRAA
Ga0207709_105100901	3300025935	Miscanthus Rhizosphere	ELQAAGFTILFDELEDHDSEVSWKGEGRSGQVALREECGSSDKIYVHVTNRPA
Ga0207704_103310032	3300025938	Miscanthus Rhizosphere	DDFKRELQAAGFTILFDELEDHDSEVSWKGEGRSGQVALREECGSSDKIYVHVTNRPA
Ga0207668_117150361	3300025972	Switchgrass Rhizosphere	YDEYKKELEAAGFKILFDEIEEHDSEVSWEGEGRSGQVALREECGSDDKIYVHITNRPAS
Ga0207639_114919961	3300026041	Corn Rhizosphere	PTEVIEGYFNGDVKDAHEEFKKELQGAGFKILFDELEEHDSEVSWEGEGRTGQVALREECGEGDKTYVHITNRPE
Ga0207702_111785841	3300026078	Corn Rhizosphere	AHEEFKKELQGAGFKILFDELEEHDSEVSWEGEGRTGQVALRKECGDGDKTYVHITNRPE
Ga0207981_10962022	3300027560	Soil	FKKELQGAGFDVLFDELEDHDSEVSWKGEGRSGQVALREECGSDEKIFVHITNRPAG
Ga0209811_103599842	3300027821	Surface Soil	TGDLKEAHDEYVKEFNAAGYKVLFEELEDHDSEVSWSGEGRTGQVALRDDCGGGKIYVHITNRPA
Ga0307313_100363451	3300028715	Soil	QEAYDEWKKELQASGYKILFDEIEDHDSEVSWEGEGRSGQVALREECGESDKIYVHITNRPE
Ga0307313_102798662	3300028715	Soil	QGAGFKILFDELEEHDSEVSWEGEGRTGQVALREECGDGDKTYVHITNRPE
Ga0307307_100224644	3300028718	Soil	EWKKELQASGYKILFDELEDHDSEVSWQGEGRSGQVALREECGSADKIYVHITNRPA
Ga0307301_100197861	3300028719	Soil	AHDEVKSSLEGAGFTILFDELEEDDSEVSWKGQGRSGQVALRMECGDSDRTFVHITNRPE
Ga0307317_101256812	3300028720	Soil	QVVEGYFNGDVEEAHEEFQKELKASGYDILFDEVEAPNDSEISWKGEGRTGQVAMRNECGDSDKTYVHITNRPA
Ga0307315_100042446	3300028721	Soil	EAHDEYVKEFEAAGYKVLFEELEDHDSEVSWSGEGRTGQVALRDDCGGDKIYVHITNRPA
Ga0307319_102087142	3300028722	Soil	EEAHEEFQKELKASGYDILFDEVEAPNDSEISWKGEGRTGQVAMRNECGDSDKTYVHITNRPA
Ga0307318_100409794	3300028744	Soil	QEGYGEWKKELQASGYKILFDEIEDHDSEVSWEGEGRSGQVALREECGESDKIYVHITNRPE
Ga0307297_100010661	3300028754	Soil	LQGAGFKILFDELEEHDSEVSWEGEGRTGQVALREECGDGDKTYVHITNRPE
Ga0307316_103570041	3300028755	Soil	SGYKILFDELEEHDSEVSWEGEGRSGQVALREECGESDKVYVHITNRPE
Ga0307280_102759112	3300028768	Soil	GAGYSILFNELEEHDSEIWWKGEGRTGQVALREECGEADKTYVHITNRAA
Ga0307320_100841623	3300028771	Soil	LQASGYKILFDELEDHDSEVSWQGEGRSGQVALREECGSADKIYVHITNRPA
Ga0307320_103200972	3300028771	Soil	AHDEVKAELEGAAFTILFDELEEHDSEVSWKGQGRSGQVALREECGDSDRTFVHITNRPE
Ga0307288_100889891	3300028778	Soil	GAGFDILFNELEDHDSEISWKGEGRTGQVALREECGDADKTYVHITNRAA
Ga0307288_103340692	3300028778	Soil	EGYFEGSVKDAHDEYLKELKAASFKILFEELEEHDSEVSWKGEGRSGQVALREDCGSSDKIYVHITNRPA
Ga0307323_100369303	3300028787	Soil	GDLQEGYGEWKKELQASGYKILFDEIEDHDSEVSWEGEGRSGQVALREECGESDKIYVHITNRPE
Ga0307323_100759223	3300028787	Soil	FNGDVKDAHEEFKKELQGAGFKILFDELEEHDSEVSWEGEGRTGQVALREECGDGDKTYVHITNRPE
Ga0307290_101443781	3300028791	Soil	KELKGAGFQILFEELEEHDSEVSWKGEGRSGQVALREDCGSSDKIYVHITNRPA
Ga0307299_100478901	3300028793	Soil	KDAHEEFKKELQGAGFKILFDELEEHDSEVSWEGEGRTGQVALREECGDGDKTYVHITNRPE
Ga0307310_105890601	3300028824	Soil	GFKILFDELEEHDSELSWKGEGRTGQVAMREECGEGDKTYVHITNRPE
Ga0307312_111504312	3300028828	Soil	KEAHDEWKKELQASGYKILFDELEDHDSEVSWQGEGRSGQVALREECGSADKIYVHITNRLA
Ga0307289_102292392	3300028875	Soil	VVEGYFEGSVKDAHDEYLKELKGAGFQILFEELEEHDSEVSWKGEGRSGQVALREDCGSSDKIYVHITNRPA
Ga0307277_100175854	3300028881	Soil	FEGDLKDAYDQYKKELQAAGYKILFDELEEHDSEVSWSGEGRSGQVALREDCADKDRIYVHITNRPA
Ga0247827_105148071	3300028889	Soil	FNGDIKEAHDEWKKELEASGYKILFDELEDHDSEVSWQGEGRSGQVALRDECGSADKIYVHITNRPA
Ga0308197_103958871	3300031093	Soil	EFKKELQGAGFKILFDELEEHDSEVSWEGEGRTGQVALREECGDGDKTYVHITNRPE
Ga0308197_104603562	3300031093	Soil	DEYKKELVGAGFKILFDELEEHDSEVSWKGQGRSGQVALREECGDSDRTFVHITNRPE
Ga0307498_100961533	3300031170	Soil	FKAAGYKVLFEELEDHDSEVSWQGEGRTGQVALRDECGGDKIYVHITNRPA
Ga0307473_111323942	3300031820	Hardwood Forest Soil	KEAHDEFEKELKGVGFDILFNELEDHDSEISWKGEGRTGQVALREECGDADKTYVHITNRAA
Ga0307407_112031422	3300031903	Rhizosphere	KKELQAAGFKILFDEIEEHDSEVSWEGEGRSGQVALRQECGSDDKLYVHITNRPASD
Ga0308176_114510212	3300031996	Soil	DEYVKEFEAAGYKVLFEEVEEHDSEVSWKGEGRTGQVALRDDCGGDKIYVHITNRPD
Ga0310897_103072561	3300032003	Soil	FKGDVKEAHDEFEKELKGVGFDILFNELEDHDSEISWKGEGRTGQVALREECGDADKTYVHITNRAA
Ga0373959_0007324_1682_1852	3300034820	Rhizosphere Soil	FEKELKGVGFDILFNELEDHDSEISWKGEGRTGQVALREECGDADKTYVHITNRAA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F058967

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences