Metagenome / Metatranscriptome Family F059175

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F059175
Family Type	Metagenome / Metatranscriptome
Number of Sequences	134
Average Sequence Length	74 residues
Representative Sequence	MDEVMLTHADDDPKGRRPGGFGFTPQGVLHGANEAFRAEFQARRTPGMRRTRTGIGVDTYRPLNVSPEFARMTG
Number of Associated Samples	107
Number of Associated Scaffolds	134

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	3.73 %
% of genes near scaffold ends (potentially truncated)	91.04 %
% of genes from short scaffolds (< 2000 bps)	94.03 %
Associated GOLD sequencing projects	102
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (83.582 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (38.060 % of family members)
Environment Ontology (ENVO)	Unclassified (37.313 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.239 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 19.61% β-sheet: 12.75% Coil/Unstructured: 67.65%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 134 Family Scaffolds
PF00857	Isochorismatase	8.21
PF06051	DUF928	4.48
PF02771	Acyl-CoA_dh_N	3.73
PF00296	Bac_luciferase	3.73
PF08028	Acyl-CoA_dh_2	2.99
PF08379	Bact_transglu_N	1.49
PF00248	Aldo_ket_red	1.49
PF01841	Transglut_core	1.49
PF03976	PPK2	0.75
PF04209	HgmA_C	0.75
PF00732	GMC_oxred_N	0.75
PF01042	Ribonuc_L-PSP	0.75
PF01738	DLH	0.75
PF02900	LigB	0.75
PF05199	GMC_oxred_C	0.75
PF07969	Amidohydro_3	0.75
PF10067	DUF2306	0.75
PF13416	SBP_bac_8	0.75
PF10137	TIR-like	0.75
PF04909	Amidohydro_2	0.75
PF04828	GFA	0.75
PF13358	DDE_3	0.75
PF12760	Zn_Tnp_IS1595	0.75
PF05860	TPS	0.75
PF08447	PAS_3	0.75
PF13577	SnoaL_4	0.75
PF00536	SAM_1	0.75
PF00561	Abhydrolase_1	0.75

COG ID	Name	Functional Category	% Frequency in 134 Family Scaffolds
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	8.21
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	8.21
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	6.72
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	3.73
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	1.49
COG1305	Transglutaminase-like enzyme, putative cysteine protease	Posttranslational modification, protein turnover, chaperones [O]	1.49
COG2326	Polyphosphate kinase 2, PPK2 family	Energy production and conversion [C]	0.75
COG3210	Large exoprotein involved in heme utilization or adhesion	Intracellular trafficking, secretion, and vesicular transport [U]	0.75
COG3508	Homogentisate 1,2-dioxygenase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.75
COG3791	Uncharacterized conserved protein	Function unknown [S]	0.75
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	83.58 %
Unclassified	root	N/A	16.42 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	83.58 %
Unclassified	root	N/A	16.42 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	83.58 %
Unclassified	root	N/A	16.42 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	61.94 %
Unclassified	root	N/A	16.42 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.49 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	56.72 %
Unclassified	root	N/A	16.42 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.75 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.75 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	33.58 %
Unclassified	root	N/A	16.42 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	4.48 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.99 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.75 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.75 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.75 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	33.58 %
Unclassified	root	N/A	16.42 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	1.49 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	1.49 %
Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_62_17	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_62_17	0.75 %
unclassified Cyanobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria	0.75 %
Cryptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Cryptosporangiales	0.75 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.75 %
Methylocystaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae	0.75 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.75 %
Devosiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae	0.75 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	33.58 %
Unclassified	root	N/A	16.42 %
Ancylobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Ancylobacter	1.49 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1.49 %
Hansschlegelia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Hansschlegelia	0.75 %
Cryptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Cryptosporangiales → Cryptosporangiaceae	0.75 %
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	0.75 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → environmental samples	0.75 %
Sphingobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium	0.75 %
Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_62_17	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_62_17	0.75 %
Devosiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae	0.75 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	33.58 %
Unclassified	root	N/A	16.42 %
Ancylobacter lacus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Ancylobacter → Ancylobacter lacus	1.49 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1.49 %
Sphingobium terrigena	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium → Sphingobium terrigena	0.75 %
Hansschlegelia quercus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Hansschlegelia → Hansschlegelia quercus	0.75 %
Cryptosporangium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Cryptosporangiales → Cryptosporangiaceae → Cryptosporangium	0.75 %
uncultured Acetobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → environmental samples → uncultured Acetobacteraceae bacterium	0.75 %
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	0.75 %
Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_62_17	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_62_17	0.75 %
Devosiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae	0.75 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	33.58 %
Unclassified	root	N/A	16.42 %
Ancylobacter lacus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Ancylobacter → Ancylobacter lacus	1.49 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1.49 %
Cryptosporangium arvum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Cryptosporangiales → Cryptosporangiaceae → Cryptosporangium → Cryptosporangium arvum	0.75 %
Sphingobium terrigena	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium → Sphingobium terrigena	0.75 %
Hansschlegelia quercus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Hansschlegelia → Hansschlegelia quercus	0.75 %
uncultured Acetobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → environmental samples → uncultured Acetobacteraceae bacterium	0.75 %
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	0.75 %
Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_62_17	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_62_17	0.75 %
Devosiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001661\|JGI12053J15887_10223720	All Organisms → cellular organisms → Bacteria	946	Open in IMG/M
3300003505\|JGIcombinedJ51221_10432312	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300004080\|Ga0062385_10180338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1121	Open in IMG/M
3300004080\|Ga0062385_10506255	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300004082\|Ga0062384_100899440	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300004633\|Ga0066395_10881557	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300005172\|Ga0066683_10665330	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	622	Open in IMG/M
3300005178\|Ga0066688_11004610	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	508	Open in IMG/M
3300005186\|Ga0066676_11180564	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	501	Open in IMG/M
3300005536\|Ga0070697_100863579	All Organisms → cellular organisms → Bacteria	802	Open in IMG/M
3300005541\|Ga0070733_10088047	All Organisms → cellular organisms → Bacteria	1971	Open in IMG/M
3300005576\|Ga0066708_10834727	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Cryptosporangiales → Cryptosporangiaceae → Cryptosporangium → Cryptosporangium arvum	577	Open in IMG/M
3300005591\|Ga0070761_10330287	All Organisms → cellular organisms → Bacteria	921	Open in IMG/M
3300005764\|Ga0066903_106109316	Not Available	630	Open in IMG/M
3300006028\|Ga0070717_10649664	All Organisms → cellular organisms → Bacteria	957	Open in IMG/M
3300006028\|Ga0070717_11227828	All Organisms → cellular organisms → Bacteria → Proteobacteria	682	Open in IMG/M
3300006176\|Ga0070765_100021739	All Organisms → cellular organisms → Bacteria → Proteobacteria	4818	Open in IMG/M
3300006176\|Ga0070765_101366326	Not Available	668	Open in IMG/M
3300006854\|Ga0075425_101055617	All Organisms → cellular organisms → Bacteria	926	Open in IMG/M
3300009012\|Ga0066710_101596900	Not Available	1000	Open in IMG/M
3300009088\|Ga0099830_10558185	Not Available	937	Open in IMG/M
3300009789\|Ga0126307_10434875	All Organisms → cellular organisms → Bacteria	1059	Open in IMG/M
3300010048\|Ga0126373_11794318	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Ancylobacter → Ancylobacter lacus	677	Open in IMG/M
3300010048\|Ga0126373_12435867	Not Available	583	Open in IMG/M
3300010048\|Ga0126373_13023655	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	524	Open in IMG/M
3300010359\|Ga0126376_11225457	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	767	Open in IMG/M
3300010361\|Ga0126378_10246947	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Ancylobacter → Ancylobacter lacus	1877	Open in IMG/M
3300010362\|Ga0126377_13407407	Not Available	514	Open in IMG/M
3300010366\|Ga0126379_10696414	All Organisms → cellular organisms → Bacteria	1109	Open in IMG/M
3300010371\|Ga0134125_12100580	All Organisms → cellular organisms → Bacteria → Proteobacteria	614	Open in IMG/M
3300010376\|Ga0126381_101047279	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1178	Open in IMG/M
3300011269\|Ga0137392_10320261	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1283	Open in IMG/M
3300011269\|Ga0137392_11523763	Not Available	527	Open in IMG/M
3300011438\|Ga0137451_1303275	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium → Sphingobium terrigena	501	Open in IMG/M
3300012200\|Ga0137382_10440797	Not Available	921	Open in IMG/M
3300012202\|Ga0137363_10247872	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1447	Open in IMG/M
3300012212\|Ga0150985_107815357	Not Available	604	Open in IMG/M
3300012354\|Ga0137366_10219476	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1416	Open in IMG/M
3300012361\|Ga0137360_11531890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	571	Open in IMG/M
3300012582\|Ga0137358_10654570	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	703	Open in IMG/M
3300012918\|Ga0137396_10046486	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2959	Open in IMG/M
3300012923\|Ga0137359_11700566	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	518	Open in IMG/M
3300012925\|Ga0137419_10736945	Not Available	802	Open in IMG/M
3300012925\|Ga0137419_11165644	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300012927\|Ga0137416_10929765	All Organisms → cellular organisms → Bacteria	774	Open in IMG/M
3300012930\|Ga0137407_11878010	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	571	Open in IMG/M
3300012971\|Ga0126369_10198319	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1933	Open in IMG/M
3300012971\|Ga0126369_10236080	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1789	Open in IMG/M
3300015371\|Ga0132258_11170174	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1944	Open in IMG/M
3300015374\|Ga0132255_101580935	All Organisms → cellular organisms → Bacteria	993	Open in IMG/M
3300016270\|Ga0182036_10879420	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	734	Open in IMG/M
3300016270\|Ga0182036_11108296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	656	Open in IMG/M
3300016270\|Ga0182036_11937939	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	500	Open in IMG/M
3300016294\|Ga0182041_10142304	All Organisms → cellular organisms → Bacteria	1837	Open in IMG/M
3300016319\|Ga0182033_10385410	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1181	Open in IMG/M
3300016319\|Ga0182033_11476473	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300016319\|Ga0182033_12132776	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	511	Open in IMG/M
3300016357\|Ga0182032_10063883	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2453	Open in IMG/M
3300016387\|Ga0182040_10388491	Not Available	1092	Open in IMG/M
3300017974\|Ga0187777_11393557	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	517	Open in IMG/M
3300019268\|Ga0181514_1546637	All Organisms → cellular organisms → Bacteria	703	Open in IMG/M
3300020580\|Ga0210403_10032403	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4179	Open in IMG/M
3300020583\|Ga0210401_11440414	Not Available	546	Open in IMG/M
3300020583\|Ga0210401_11454668	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	543	Open in IMG/M
3300021178\|Ga0210408_10937204	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	672	Open in IMG/M
3300021181\|Ga0210388_11514251	Not Available	560	Open in IMG/M
3300021401\|Ga0210393_10052124	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3219	Open in IMG/M
3300021401\|Ga0210393_10434727	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Hansschlegelia → Hansschlegelia quercus	1071	Open in IMG/M
3300021404\|Ga0210389_10535317	All Organisms → cellular organisms → Bacteria	921	Open in IMG/M
3300021404\|Ga0210389_10997844	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	649	Open in IMG/M
3300021406\|Ga0210386_11619521	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	537	Open in IMG/M
3300021420\|Ga0210394_10140593	All Organisms → cellular organisms → Bacteria	2095	Open in IMG/M
3300021432\|Ga0210384_10710196	All Organisms → cellular organisms → Bacteria	899	Open in IMG/M
3300021433\|Ga0210391_10543130	Not Available	912	Open in IMG/M
3300021479\|Ga0210410_11695914	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	526	Open in IMG/M
3300021559\|Ga0210409_11105273	Not Available	668	Open in IMG/M
3300021559\|Ga0210409_11679787	Not Available	511	Open in IMG/M
3300021560\|Ga0126371_10914210	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1021	Open in IMG/M
3300022512\|Ga0242676_1043432	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300022532\|Ga0242655_10193349	Not Available	619	Open in IMG/M
3300027815\|Ga0209726_10247149	All Organisms → cellular organisms → Bacteria	904	Open in IMG/M
3300027824\|Ga0209040_10205275	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → environmental samples → uncultured Acetobacteraceae bacterium	1019	Open in IMG/M
3300027903\|Ga0209488_10222676	All Organisms → cellular organisms → Bacteria	1419	Open in IMG/M
3300028906\|Ga0308309_10448181	Not Available	1112	Open in IMG/M
3300028906\|Ga0308309_11057903	Not Available	702	Open in IMG/M
3300030659\|Ga0316363_10120002	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1151	Open in IMG/M
3300031474\|Ga0170818_103429371	All Organisms → cellular organisms → Bacteria	1471	Open in IMG/M
3300031525\|Ga0302326_12482098	Not Available	651	Open in IMG/M
3300031543\|Ga0318516_10315554	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	903	Open in IMG/M
3300031543\|Ga0318516_10742593	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	556	Open in IMG/M
3300031543\|Ga0318516_10763204	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	547	Open in IMG/M
3300031561\|Ga0318528_10228873	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	996	Open in IMG/M
3300031640\|Ga0318555_10305580	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	861	Open in IMG/M
3300031668\|Ga0318542_10502555	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	630	Open in IMG/M
3300031679\|Ga0318561_10157293	All Organisms → cellular organisms → Bacteria	1222	Open in IMG/M
3300031681\|Ga0318572_10359064	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	864	Open in IMG/M
3300031681\|Ga0318572_10645763	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	630	Open in IMG/M
3300031708\|Ga0310686_108314734	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	1046	Open in IMG/M
3300031719\|Ga0306917_10478564	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	977	Open in IMG/M
3300031744\|Ga0306918_10995103	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	651	Open in IMG/M
3300031744\|Ga0306918_11525538	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	510	Open in IMG/M
3300031748\|Ga0318492_10096726	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1446	Open in IMG/M
3300031748\|Ga0318492_10421452	All Organisms → cellular organisms → Bacteria → Proteobacteria	703	Open in IMG/M
3300031751\|Ga0318494_10397752	All Organisms → cellular organisms → Bacteria → Proteobacteria	799	Open in IMG/M
3300031764\|Ga0318535_10196723	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	902	Open in IMG/M
3300031771\|Ga0318546_10744819	Not Available	690	Open in IMG/M
3300031795\|Ga0318557_10306547	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	729	Open in IMG/M
3300031819\|Ga0318568_10213956	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1190	Open in IMG/M
3300031820\|Ga0307473_10229321	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1124	Open in IMG/M
3300031833\|Ga0310917_11148590	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	517	Open in IMG/M
3300031835\|Ga0318517_10217359	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	862	Open in IMG/M
3300031846\|Ga0318512_10728758	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	509	Open in IMG/M
3300031879\|Ga0306919_11157687	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	588	Open in IMG/M
3300031880\|Ga0318544_10224919	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	725	Open in IMG/M
3300031890\|Ga0306925_10477368	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1330	Open in IMG/M
3300031890\|Ga0306925_11095800	All Organisms → cellular organisms → Bacteria → Proteobacteria	805	Open in IMG/M
3300031897\|Ga0318520_10331149	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	921	Open in IMG/M
3300031910\|Ga0306923_10049756	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4623	Open in IMG/M
3300031910\|Ga0306923_10231083	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_62_17	2115	Open in IMG/M
3300031942\|Ga0310916_10195286	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1691	Open in IMG/M
3300031942\|Ga0310916_10768542	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae	813	Open in IMG/M
3300031942\|Ga0310916_10917997	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	734	Open in IMG/M
3300031946\|Ga0310910_10452872	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1018	Open in IMG/M
3300031946\|Ga0310910_10701283	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	800	Open in IMG/M
3300031947\|Ga0310909_10584687	Not Available	933	Open in IMG/M
3300031962\|Ga0307479_11560250	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	616	Open in IMG/M
3300031981\|Ga0318531_10113531	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1199	Open in IMG/M
3300032044\|Ga0318558_10117674	All Organisms → cellular organisms → Bacteria	1258	Open in IMG/M
3300032063\|Ga0318504_10279080	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	789	Open in IMG/M
3300032068\|Ga0318553_10458881	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	667	Open in IMG/M
3300032090\|Ga0318518_10469167	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	645	Open in IMG/M
3300032205\|Ga0307472_101827171	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	604	Open in IMG/M
3300033289\|Ga0310914_11656505	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	543	Open in IMG/M
3300034680\|Ga0370541_055032	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	528	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.01%
Host-Associated	Host-Associated	2.99%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	91.79%
Aquatic	Environmental → Aquatic	5.22%
Plants	Host-Associated → Plants	2.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	91.04%
Freshwater	Environmental → Aquatic → Freshwater	4.48%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.24%
Sediment	Environmental → Aquatic → Sediment	0.75%
Peat	Environmental → Terrestrial → Peat	0.75%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	81.34%
Loam	Environmental → Terrestrial → Soil → Loam	8.96%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.24%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.75%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.75%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.75%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	53.73%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.88%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.72%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.73%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.73%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.24%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.24%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	0.75%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.75%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.75%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	38.06%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.69%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.19%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.21%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.73%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.99%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.24%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.49%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.49%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.49%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.49%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.75%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	0.75%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.75%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.75%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.75%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.75%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.75%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.75%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.75%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.75%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.75%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.75%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011438	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT500_2	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300019268	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022512	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300027815	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300034680	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_116 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12053J15887_102237201	3300001661	Forest Soil	MDELMPNHADEDPSGRRPRLFRHTPQDILHGAPEAYRAEFQKKREPSQRRTGTSVGVDTYRPLIPTPEFTKMA
JGIcombinedJ51221_104323121	3300003505	Forest Soil	DEDPSGRRPGSFRHTPQGILHGANEAYRAEFQARRKPGMRRTSTSVGVDTYQPLRPSAEFARMSS*
Ga0062385_101803383	3300004080	Bog Forest Soil	MDEVMLTHADDDPRGRRPGGFVFTPQGVLHGADEAFRAEFRARRAPGMRRTRTGIGVDTYRPLNVSPEFARMTG*
Ga0062385_105062551	3300004080	Bog Forest Soil	PSYHRNIDMDEVMLSHADEDPSGRRPGSFRHTPQGILHGANEAYRAEFQARRKPGMRRTSTSVGVDTYRPLIASAEFARMSG*
Ga0062384_1008994402	3300004082	Bog Forest Soil	YHRNIDMDEVMLSHADEDPSGRRPDSFRHTPQGILHGANEAYRAEFQARRKPGMRRTSTSVGVDTYRPLRPSAEFARMNS*
Ga0066395_108815571	3300004633	Tropical Forest Soil	EDPSGRRPGSFRHTPQGVLHGASDAYRAEFQARRKPGMRRTSTSVGVDTYRPLIPSAEFARMSA*
Ga0066683_106653302	3300005172	Soil	SYHRNIDMDEVMLTHADEDPKGRRPGGFSFTPQGVLHGANEAFRAEFQAQRRPGMRRTRTGIGVDTYRPLNVWPEFARMTR*
Ga0066688_110046102	3300005178	Soil	SYHRNIDMDEVMLTHADEDPKGRRPGGFAFTPQGVLHGANEALRAEFQAQRRPGMRRTRTRTGIGVDTYRPLNVSPEFARMTG*
Ga0066676_111805642	3300005186	Soil	RRRGSGRQELPSYHRNIDMDEVMLTHADDDPAGRRPGGFSFTPQGVLHGANEVFRAEFQIQRRPGVRRTRTSIGVDTYRPLNVSPEFARMTG*
Ga0070697_1008635791	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MLSHADEDPNGRRPGSFRHTPQGILHGANEAYRAEFQARRKPGMRRTSTSVGVDTYRPLRASPEFARMSG*
Ga0070733_100880475	3300005541	Surface Soil	DPNGRRPGMFRHTPQGILHGADEATRAEFQKKRKPGTHRTATMVGVDTYRPLVPTTEFKKLAG*
Ga0066708_108347271	3300005576	Soil	LSHADEDPSGRRPGGFRHTPQGILHGADEAYRAEFQARRKPGMRRTSTMVGIDSYRPLRPAPEFVRIAG*
Ga0070761_103302871	3300005591	Soil	MDEVILSHANDDPGGRRPGGFSFTPQGILHGATEDARAAFNARRKPGDMRRWTGVGVDTYRPLEVSDAFAKMTK*
Ga0066903_1061093161	3300005764	Tropical Forest Soil	MDEVTLTHANDDPKGRRPGGFSFTPHGVLHGANDALRTEFQAARTSGMRWTRTGIGVDTYRLLNVSPEFARMTR*
Ga0070717_106496641	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	RNIDMDEVMLSHADEDPNGRRPGSFRHTPQGILHGANEAYRAEFQARRKPGMRRTSTSVGVDTYRPLRASPEFARMSG*
Ga0070717_112278281	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	DDPAGRRPGGLRHTPQGILHGADEAARAAFQARRAPGMRRGGISIGVDTYRPLRVAPEFARMAG*
Ga0070765_1000217392	3300006176	Soil	MDEVILSHANDDPGGRRPGGFSFTPQGILHGATDEARAAFNAKRKPGDMRRWTGVGVDTYRPLEVSDAFAKMTK*
Ga0070765_1013663261	3300006176	Soil	HRNIDMDEVILSHANDDPGGRRPGGFSFTPQGILHGATEEARAAFNAKRKPGDMRTWTGIGVDTYGPLKVSEAFAKMTE*
Ga0075425_1010556172	3300006854	Populus Rhizosphere	YHRNIDMDEVILSHATEDPGGRRPGGFTFTPQGILHGATEEARAAFNARRKPGDMRRWTGVGVDTYKPLKSSDTFATMTR*
Ga0066710_1015969001	3300009012	Grasslands Soil	RNIDMDEVMLTHADENPAGRRPGGFRHTPQGILHGADEATRAEFQKRREPGQRRTATNVGVDTYRPLTPTPEFAKMAG
Ga0099830_105581852	3300009088	Vadose Zone Soil	THADEAPAGRRPGGFRHTPQGILQGADEAYRAEFQKKRKPGMHRTATMVGVDTYRPLNPTPEFAKMAG*
Ga0126307_104348752	3300009789	Serpentine Soil	MDEVMLNHADEDPSGRRPGLFRHTPQGVLHGAPKAYRAEFHKQRQPGQRRTGWSVGVDTYRPLNPTPEFIKMVD*
Ga0126373_117943182	3300010048	Tropical Forest Soil	DMDEVILSHANDDPDGRRPGGFSFTPQGILHGASEEARAAFNARRKPGDTRKWTGVGIDTYRPLKPSAVFARMTK*
Ga0126373_124358671	3300010048	Tropical Forest Soil	MQDEAMLTYADEDPNGRRPGGFSFTPQGVLHGANEAFRAEFQARRIPGSRRTRTSIGVDTYRPLQISPEFAQMTE*
Ga0126373_130236551	3300010048	Tropical Forest Soil	HRNIDMDEVMLSHADEDPSGRRPGSFRHTPQGVLHGASDAYRAEFQARRRPGMRRTSTSVGVDTYRPLISSAEFARMSA*
Ga0126376_112254571	3300010359	Tropical Forest Soil	LSHADEDPSGRRPGSFRHTPQGVLHGASDAYRAEFQARRKPGMRRTSTSVGVDTYRPLIPSAEFARMSA*
Ga0126378_102469471	3300010361	Tropical Forest Soil	DEVILSHANDDPDGRRPGGFSFTPQGILHGASEEARAAFNARRKPGDTRKWTGVGIDTYRPLKPSAVFARMTK*
Ga0126377_134074071	3300010362	Tropical Forest Soil	NIDMDEVMLSHADEDPSGRRPGSFRHTPQGILHGANEAYRAEFQARRKPGMRRTSTMVGVDTYRLLKPAAEFVRIAG*
Ga0126379_106964142	3300010366	Tropical Forest Soil	MDDVMLTHADDDPKRRRPGGFSLTPQGVLHLPTRRSAPNSRLRAPPGTRRTRTGIGVDTYRPLNVSPEFARMTQ*
Ga0134125_121005802	3300010371	Terrestrial Soil	PGGRRPGGFSFTPQGVLHGASEEARAAFNARRKPGDMRTWTGVGVDSHKPLKPTEAFARMTGS*
Ga0126381_1010472791	3300010376	Tropical Forest Soil	ADDDPGGRRPGGFGFTPQGVLHGADETFRAEFQARRTTGMRRTRSGIGVDTYRPLSVSPEFARMTR*
Ga0137392_103202611	3300011269	Vadose Zone Soil	HRNIDMDEVMLTHADEDPSGRRPGGFRHTPQGILHGATEAYRAEFQKKRKPGMHRTSTNVGVDTYRPLNPTPEFARMAG*
Ga0137392_115237631	3300011269	Vadose Zone Soil	LTHADEDPAGRRPGGFRHTPQGILHGADEAYRAEFQKKRKPGMHRTATMVGVDTYRPLNPTPEFAKMAG*
Ga0137451_13032751	3300011438	Soil	NIDMDEVMLNHADDDPSGRRPGLFRHTPQGILHGAPEAYRAEFQANRKPNTRRTGTSVGVDTYRPLIVAPEFARMAG*
Ga0137382_104407973	3300012200	Vadose Zone Soil	MPMRTPPAAAPGGFRHTPQGILHGATEAYRAEFQKKRKPGMHRTATMVGVDTYRPLTPTPEFARMAG*
Ga0137363_102478723	3300012202	Vadose Zone Soil	PSGRRPGNFRHTPQGILHGANEAYRAEFQARRKPGMRRTSTMVGVDTYRPLRPAPEFSRIAG*
Ga0150985_1078153571	3300012212	Avena Fatua Rhizosphere	HRNIDMDEVTLSHADGNPLGRRPGSLRHTPQGVLHGATEEYRAEFQRKRRPGQTRTGTMVGIDTYRPLIPSTEFMRTAG*
Ga0137366_102194764	3300012354	Vadose Zone Soil	SYHRNIDMDEVMLTHADENPAGRRPGGFRHTPQGILHGADEATRAEFQKRRQPGQRRTATNVGVDTYRPLIPTAEFAKMAG*
Ga0137360_115318902	3300012361	Vadose Zone Soil	LSHADEDPSGRRPGNFRHTPQGILHGATEAYRAEFQARRKPGMRRTSTSIGVDTYRPLIPSAEFARMSGKL*
Ga0137358_106545703	3300012582	Vadose Zone Soil	NIDMDEVMLSHADEDPSGRRPGNFRHTPQGILHGANEAYRAEFQARRKPGMRRTSTSVGVDTYRPLRPSPEFARMRGQL*
Ga0137396_100464861	3300012918	Vadose Zone Soil	DEDPKGRRPGGFSFTPQGVLHGANEALRAEFQAQRRPGMRRTRTGIGVDTYRPLNVSPEFARMTG*
Ga0137359_117005662	3300012923	Vadose Zone Soil	ADEDPKGRRPGGFSFTPQGVLHGANEAFRAEFQAQRTPGMRRTRTGIGIDTYRPLNVSPEFARMTG*
Ga0137419_107369453	3300012925	Vadose Zone Soil	MLTHADDDPAGRRPGGFWHTPQGILHGATEAYRAEFQKKRQPGMHRTATMVGVDTYRPLNPTPEFAKMAG*
Ga0137419_111656442	3300012925	Vadose Zone Soil	MDELMPNHADEDPSGRRPRLFRHTPQDILHGAPEAYRAEFQKKREPSQRRTGTGVGVDTYRPLIPTPEFTKMAG*
Ga0137416_109297652	3300012927	Vadose Zone Soil	LTHTDDDPAGRRPGGCRHTPQGILHGGTEAYRAEFQKKRKPGMHRTATMVGVDTYRPLNPTPEFAKMAG*
Ga0137407_118780101	3300012930	Vadose Zone Soil	THADDDPKGRRPGGFSFTPQGVLHGANEAFRAEFQAQRTPGMRRARTGIGVDTYRALNVSPEFARMTG*
Ga0126369_101983193	3300012971	Tropical Forest Soil	RNIDMDEVMLSHADEDPSGRRPGSFRHTPQGVLHGASDAYRAEFQARRRPGMRRTSTSVGVDTYRPLISSAEFARMSA*
Ga0126369_102360803	3300012971	Tropical Forest Soil	SHADEDPSGRRPGSFRHTPQGILHGASDAYRAEFQARRKPGMRRTSTSVGVDTYRPLIPSAEFARMSA*
Ga0132258_111701742	3300015371	Arabidopsis Rhizosphere	MDEVMLSHADEDPSSRRPGNFRHTPQGILHAANEAYRAEFQARRKPGMRRTSTMVGVDSYRPLRPAPEFVRIAG*
Ga0132255_1015809352	3300015374	Arabidopsis Rhizosphere	YHRNIDMDEVILSHANDDPGGRRPGAFSFTPQGILHGATEQARAAFNAKRKPGDMRKWTGVGVDTYRPLIPTREFTKMTG*
Ga0182036_108794201	3300016270	Soil	MDEVMLTHADDDPKGRRPGGFGFTPQGVLHGANEAFRAEFQARRTPGMRRTRTGIGVDTYRPLNVSPEFARMTG
Ga0182036_111082962	3300016270	Soil	YHRNIDMDEVMLTHADDDPQGRRLGGFAFTPQGVLHGASEAFRAEFQARRSLGTRRTRTGIGVDTYRPLTVSPEFARMTG
Ga0182036_119379391	3300016270	Soil	EDPSGRRPGNFRHTPQGILHGANEAYRAEFQARRKPGARRTSTSVGVDTYRPLRPSPEFAQMSR
Ga0182041_101423041	3300016294	Soil	MLYHRNIEMDEVMLTHADDDPGDRRPGGFGFTPQGVLHGADEAFRAELQARRTTGMRRTRTGIGVDTYRPLSVSPEFARMTR
Ga0182033_103854101	3300016319	Soil	MLTHADEDPQDRRPGGFAFTPQGVLHGVNEAFRAEFQARRITGTRRTRTGIGVDSYRPLNVSPEFARMTE
Ga0182033_114764731	3300016319	Soil	IDMDEVMLSHDDEDPSGRRPGNFRHTPQGILHGANEAYRAEFQARRKPGARRTSTSVGVDTYRPLTAAPEFVRISG
Ga0182033_121327762	3300016319	Soil	LAHADDDPKGRRSGGFSFTPQGVLHGADEAFRAEFQTRRTPGMRRTRTGIGVDTYRPLNVTPEFARMTG
Ga0182032_100638831	3300016357	Soil	EELPSYHRNIDMDEVMLSHDDEDPSGRRPGNFRHTPQGILHGANEAYRAEFQARRKPGARRTSTSVGVDTYRPLTAAPEFVRISG
Ga0182040_103884912	3300016387	Soil	SYHRNIDMDEVMLSHADEDPSGRRPGSFRHTPQGILHGANEAYRAEFQARRKPGMRRTSTSVGVDTYRPLRASPEFARMSS
Ga0187777_113935572	3300017974	Tropical Peatland	LYTLAVLLRRSPDEDPKVRRPGGISFTPQGVLHGANEAFRTKFRAARPRGMCRMRTGIRIDTYRTLNV
Ga0181514_15466372	3300019268	Peatland	NIDMDEVILSHATEDPGGRRPGGFIFTPQGILHGANEDARAAFNAKRKPGDMRKWTGVGVDTYRPLKLSGVFAKMTS
Ga0210403_100324033	3300020580	Soil	LNAEELPSYHRNIDMDEVMLAHADDDPKGRRSGGFSFTPQGVLHGADEAFRAEFQTRRTPGTRRTRTGIGVDTYRPLNVTPEFARMTE
Ga0210401_114404141	3300020583	Soil	PNRNIDMDEVMLTHADEDPAGRRPGGFRHTPQGILHGADEAYRAEFQKKRQPGMHRTATMVGVDTYRPLIPTAEFAKMAG
Ga0210401_114546681	3300020583	Soil	YHRNIDMDEVMLTHADEDPKGRRPGGFSFTPQGVLHGANEALRAEFQAQRRPGMRRTRTGIGVDTYRPLNVSPEFARMTG
Ga0210408_109372042	3300021178	Soil	AEELPSYHRDIDMDEVMLSHADEDPSGRRPGNFRHTPQGILHGANEAYRAEFQARRKPGMRRTSTMVGVDTYRPLRPAPEFLRIAG
Ga0210388_115142512	3300021181	Soil	YHRNIDMDEVILSHTNDDPGGRRPGGFSFTPQGILHGATEEARAAFNARRKPGDTRRWTGVGVDTYLPLKVSEAFAKMTK
Ga0210393_100521244	3300021401	Soil	EVMLSHADEDPDGRRPGNFRHTPQGILHGANEAYRAEFQARRKPAMRRTSTMVGVDTYRPLRPAAEFLRIAG
Ga0210393_104347271	3300021401	Soil	MDEVILSHANDDPGGRRPGGFSFTPQGILHGATEEARAAFNARRQPGDMRRWTGVGVDTYRPLKVSDAFAKMTG
Ga0210389_105353173	3300021404	Soil	DEVMLSHAEEDPSGRRPGGFRHTPQGILHGANEAYRAEFQARRKPGMRRTSTMVGVDTYRPLRPASEFLRIAG
Ga0210389_109978442	3300021404	Soil	NIDMDEVMLSHADEDPSGRRPGSFRHTPQGILHGANEAYRAEFQARRKPGMRRTSTSVGVDTYRPLRPSPEFVQMSS
Ga0210386_116195212	3300021406	Soil	HADDDPKGRRSGGFSFTPQGVLHGADEAFRAEFQTRRTPGMRRTRTGIGVDTYRPLNVTPEFARMTE
Ga0210394_101405933	3300021420	Soil	NDDPGGRRPGGFSFTPQGILHGATEEARATFNAKRKPGDMRRWTGVGIDTYKPLKVSDAFAKMTR
Ga0210384_107101963	3300021432	Soil	LSHADEDPSGRRPGNFRHTPQGILHGANEAYRAEFQARRKPGMRRTSTMVGVDTYRPLRPASEFLRIAG
Ga0210391_105431302	3300021433	Soil	DEVILSHANDDPGGRRPGGFSFTPQGILHGATEDARAAFNARRKPGDMRKWTGVGVDTYRPLKVSAEFAKMTK
Ga0210410_116959141	3300021479	Soil	RNIDMDEVMLTHADDDPSGRRPGGFSFTPQGVLHGANEAFRAEFQARRTPWMRRTRTGIGVDTYRPLRVSPEFARMTG
Ga0210409_111052731	3300021559	Soil	PGGRRPGGFSFTPQGILHGATEEARAAFNATRKPGDMRRWTGIGVDIYRPLKVSDAFAKMTA
Ga0210409_116797871	3300021559	Soil	HRNIDMDEVMLGHADTDPAGRRPGMFRHTPQGILHGADEATRAEFQKKRKPGTHRTATMVGVDTYRPLNPTAEFKRMAG
Ga0126371_109142101	3300021560	Tropical Forest Soil	THADEDPTGRRPGGLSFTPQGVLHGANEAFRAEFQAARTPGMRRTRTGIGVDTYRPLNVSPEFARMTG
Ga0242676_10434322	3300022512	Soil	PSYHRNIDMDEVMLSHADEAPLGRRPGSFRHTPQGILHGANEAYRAEFQVRRKPGLRRTSTMVGVDTYRPLRPAPEFVRIAG
Ga0242655_101933491	3300022532	Soil	SYHRNIDMDEVMLSHADEDPSGRRPGNFRHTPQGILHGANEAYRAEFQARRKPGMRRTSTLVGVDTYRPLRPAPEFLRTAG
Ga0209726_102471491	3300027815	Groundwater	EVILSHANDDPGGRRPGGFTFTPQGILHGATEEARAAFNAKRKPGDMRRWTGVGVDTYRPLKVSDVFAGMTK
Ga0209040_102052752	3300027824	Bog Forest Soil	VMLSHADEDPSGRRPGSFRHTPQGILHGANEAYRAEFQARRKPGMRRTSTMVGVDTYRPLRPAPEFLRIAA
Ga0209488_102226761	3300027903	Vadose Zone Soil	LPSYHRNIDMDEVMLTHADEDPKGRRPGGFSFTPQGVLHGANEAFRAEFQAQRTPGMRRTRTGIGIDTYRPLNVSPEFARMTG
Ga0308309_104481811	3300028906	Soil	NIDMDEVILSHANDDPGGRRPGGFSFTPQGILHGATEEARAAFNAKRKPGDMRTWTGIGVDTYGPLKVSEAFAKMTE
Ga0308309_110579033	3300028906	Soil	IDMDEVILSHANDDPGGRRPGGFSFTPQGILHGATEEARAAFNARRKPGDMRRWTGVGVDTYRPLIPTPEFAGMTG
Ga0316363_101200022	3300030659	Peatlands Soil	SYHRNIDMDEVILSHANDDPGGRRPGGFTFTPQGILHGASEEARAAFNARRQPGDMRRWTGVGVDTYRPLKVSDAFAKMTSR
Ga0170818_1034293711	3300031474	Forest Soil	MLTHADDDPQGRRPGGFGFTPQGVLHGADEVFRAEFQARRTPGARRTRTGIGVDTYRPLDVSPEFARMTR
Ga0302326_124820982	3300031525	Palsa	GGRRPGGFSFTPQGILHGATDEARAAFNAKRKPGDMRRWTGIGVDTYRPLKVSEAFAKMT
Ga0318516_103155541	3300031543	Soil	RNIDMDEVMLSHADEDPSGRRPGSFRHTPQGILHGANEAYRAEFQASRQPGMRRTSTSVGIDTYRPLRPSPEFAQMSS
Ga0318516_107425932	3300031543	Soil	DEVMLAHADDDPKGRRSGGFSFTPQGVLHGADEAFRAEFQTRRTPGMRRTRTGIGVDTYRPLNVTPEFARMTG
Ga0318516_107632041	3300031543	Soil	RNIDMDEVMLSHADEDPSGRRPGNFRHTPQGILHGANEAYRAEFQARRKPGARRTSTSVGVDTYRPLRPSPEFAQMSR
Ga0318528_102288731	3300031561	Soil	DDPKGRRSGGFSFTPQGVLHGADEAFRAEFQTRRTPGMRRTRTGIGVDTYRPLNVTPEFARMTG
Ga0318555_103055801	3300031640	Soil	THADDDPKGRRPGGFSFTPQGVLHGASEAFRAEFQATRTPGMRRTRTGIGVDTYRPLNIAPEFARMTE
Ga0318542_105025551	3300031668	Soil	DMDEVMLSHDDEDPSGRRPGNFRHTPQGILHGANEAYRAEFQARRKPGARRTSTSVGVDTYRPLTAAPEFVRISG
Ga0318561_101572933	3300031679	Soil	IDMDEVMLTHADDDPKGRRPGGFSFTPQGVLHGASEAFRAEFQATRTPGMRRTRTGIGVDTYRPLNIAPEFARMTE
Ga0318572_103590641	3300031681	Soil	VMLIHADDDPKSRRPGGFAFTPQGVLHGADEAFRIEFQARRTPGMRRTRTGTGVDTYRPLNVSPEFARITG
Ga0318572_106457631	3300031681	Soil	VMLAHADDDPKGRRSGGFSFTPQGVLHGADEAFRAEFQTRRTPGMRRTRTGIGVDTYRPLNVSPEFARMTG
Ga0310686_1083147342	3300031708	Soil	LSHANGDPGGRRPGGFSFTPQGILHGAPEEARAAFNAKRKPGDMRKWTGVGVDTYRPLKPSTVFARMTK
Ga0306917_104785641	3300031719	Soil	DMDEVMLTHADDAPQGRRPGGFAFTPQGVLHGANEAFRAEFQAQRKPGTRRTRTGIGVDTYRPLNVSPEFARMTG
Ga0306918_109951031	3300031744	Soil	YHRNIDMDEVLLTHADDDPQGRRLGGFAFTPQGVLHGASEAFRAEFQARRSLGTRRTRTGIGVDTYRPLTVSPEFARMTG
Ga0306918_115255382	3300031744	Soil	ELPSYHRNIDMDEVMLTHADDDPKGRRPGGFSFTPQGVLHGASEAFRAEFQATRTPGMRRTRTGIGVDTYRPLNIAPEFARMTE
Ga0318492_100967261	3300031748	Soil	HVDEDPGGRRPGSFRHTPQGVLHGAGEAYRAEFQARRKPGMRRTSTSIGVDTYRPLIPSVEFARMTA
Ga0318492_104214522	3300031748	Soil	RYHRNIDMDEVMLSHADEDPSGRRPGSFRHTPQGILHGANEAYRAEYQARRKPGMRRTSTSIGVDTYRPLRPSAEFAQVSS
Ga0318494_103977522	3300031751	Soil	DEVMLSHDDEDPSGRRPGNFRHTPQGILHGANEAYRAEFQARRKPGARRTSTSVGVDTYRPLTAAPEFVRISG
Ga0318535_101967231	3300031764	Soil	YHRNIDMDEVMLAHADDDPKGRRSGGFSFTPQGVLHGADEAYRAEFQTRRTPGMRRTRTGIGVDTYRPLNVTPEFARMTG
Ga0318546_107448192	3300031771	Soil	MLSHADEDPSGRRPGSFRHTPQGILHGANEAYRAEFQARRKPGMRRTSTSVGVDTYRPLKPSPVFAQMSS
Ga0318557_103065471	3300031795	Soil	VMLSHADEDPNGRRPGNFRHTPQGILHGANEAYRAEFQARRKPGARRTSTSVGVDTYRPLRPSPEFAQMSR
Ga0318568_102139563	3300031819	Soil	NAEELPSYHRNIDMDEVMLAHADDDPKGRRSGGFSFTPQGVLHGADEAFRAEFQTRRTPGMRRTRTGIGVDTYRPLNVTPEFARMTG
Ga0307473_102293211	3300031820	Hardwood Forest Soil	DMDEVMLTHADEDPKGRRPGGFSFTPQGVLHGANEALRAEFQAQRRPGMRRTRTGIGVDTYRRLNVSPEFARMTG
Ga0310917_111485901	3300031833	Soil	VMLAHADDDPKGRRSGGFSFTPQGVLHGADEAFRAEFQTRRTPGMRRTRTGIGVDTYRPLNVTPEFARMTG
Ga0318517_102173592	3300031835	Soil	LPSYHRNIDMDEVMLTHADEDPRGRRAGGFAFTPQGVLHGANEAFRAEFQARRSPGMRRTRTGIGVDTYRPLNVSPEFARMTG
Ga0318512_107287582	3300031846	Soil	YHRNIDMDEVMLTHADEDPKGRRPGGFSFTPQGVLHGANEAFRAEFQAARTPGMRRTRTGIGVDTYRPLNMSPEFTRMTE
Ga0306919_111576872	3300031879	Soil	MLAHADDDPKGRRSGGFSFTPQGVLHGADEAFRAEFQTRRTPGMRRTRTGIGVDTYRPLNVTPEFARMTG
Ga0318544_102249192	3300031880	Soil	PSYHRNIDMDEVMLAHADDDPKGRRSGGFSFTPQGVLHGADEAFRAEFQTRRTPGMRRTRTGIGVDTYRPLNVTPEFARMTG
Ga0306925_104773681	3300031890	Soil	MLSHADEDPSGRWPGNFRHTPQGILHGANEAYRAEFQARRKPGARRTSTSVGVDTYRPLRPSPEFAQMSR
Ga0306925_110958001	3300031890	Soil	MLSHADEDPSGRRPGSFRHTPQGILHGANEAYRAEYQARRKPGMRRTSTSIGVDTYRPLRPSAEFAQVSS
Ga0318520_103311491	3300031897	Soil	EVMLSHVDEDPGGRRPGSFRHTPQGVLHGAGEAYRAEFQARRKPGMRRTSTSIGVDTYRPLIPSVEFARMTA
Ga0306923_100497562	3300031910	Soil	MLTHADDDPKGRRPGGFSFTPQGVLHGASEAFRAEFQATRTPGMRRTRTGIGVDTYRPLNIAPEFARMTE
Ga0306923_102310833	3300031910	Soil	THADDDPQGRRLGGFAFTPQGVLHGASEAFRAEFQARRSLGTRRTRTGIGVDTYRPLTVSPEFARMTG
Ga0310916_101952861	3300031942	Soil	DDEDPSGRRPGNFRHTPQGILHGANEAYRAEFQARRKPGARRTSTSVGVDTYRPLTAAPEFVRISG
Ga0310916_107685422	3300031942	Soil	DEVMLSHADEDPSGRRPGSFRHTPQGILHGANEAYRAEFQARRKPGMRRTSTSVGVDTYRPLRASPEFARMSS
Ga0310916_109179972	3300031942	Soil	DMDEVMLTHADDDPKGRRPGGFSFTPQGVLHGASEAFRAEFQATRTPGMRRTRTGIGVDTYRPLNIAPEFARMTE
Ga0310910_104528723	3300031946	Soil	IDMDEVMLTHADEDPQGRRPGGFAFTPQGVLHGANEAFRAEFQARRSPGTRRTRTGIGIDTYRPLNVSPEFARMTG
Ga0310910_107012831	3300031946	Soil	ELPSYHRNIDMDEVMLTHADEDPQDRRPGGFAFTPQGVLHGVNEAFRAEFQARRITGTRRTRTGIGVDSYRPLNVSPEFARMTE
Ga0310909_105846871	3300031947	Soil	SHADEDPSGRRPGSFRHTPQGILHGANEAYRAEFQARRKPGMRRTSTSVGVDTYRPLKPSPVFAQMSS
Ga0307479_115602502	3300031962	Hardwood Forest Soil	MDEVVLSHADDDPAGRRPGGLSHTPQGLLHGASEADRAAFQARRTPGMRRTSTGIGVDAYRPLTATPAFAALAG
Ga0318531_101135313	3300031981	Soil	RNIDMDEVMLAHADDDPKGRRSGGFSFTPQGVLHGADEAFRAEFQTRRTPGMRRTRTGIGVDTYRPLNVTPEFARMTG
Ga0318558_101176741	3300032044	Soil	DDPRGRRPGGLAFTPQGILHGATEAFRTEFQARRTPGMRRTRTGIGIDTYRPLNVSPEFARMTD
Ga0318504_102790801	3300032063	Soil	DMDEVMLTHADDDPRGRRPGGFAFTPQGILHGATEAFRTEFQARRTPGMRRTRTGIGIDTYRPLNVSPEFARMTD
Ga0318553_104588812	3300032068	Soil	VMLSHADEDPGGRRPGSFRHTPQGVLHGAGEAYRAEFQARRKPGMRRTSTSIGVDTYRPLIPSVEFARMTA
Ga0318518_104691672	3300032090	Soil	MDEVMLTHADDDPQGRRPGGFGFTPQGVLHGANEAFRTEFQAQRTPGTRRTRTGIGVDTYRPLTVSPEFARMTG
Ga0307472_1018271711	3300032205	Hardwood Forest Soil	RNIDMDEVMLTHADEDPKGRRPGGFSFTPQGVLHGANEAFRAEFQAQRRSGVRRTRTGIGVDTYRPLNVSPEFARMTE
Ga0310914_116565052	3300033289	Soil	YHRNIDMDEVMLAHADDDPKGRRSGGFSFTPQGVLHGADEAFRAEFQTRRTPGMRRTRTGIGVDTYRPLNVTPEFARMTG
Ga0370541_055032_3_206	3300034680	Soil	HADEDPSGRRPGSFRHTPQGILHGANEAYRAEFQARREPGMRRTSTSIGVDTYRPLRPSPEFSQMSS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F059175

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences