Metagenome Family F059206

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F059206
Family Type	Metagenome
Number of Sequences	134
Average Sequence Length	61 residues
Representative Sequence	CLMIEGRASLRDIGVLYRSALYPLSEDGVAIDHVLGAANYRPLRENEKLIMPLIRTKWL
Number of Associated Samples	87
Number of Associated Scaffolds	134

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	20.30 %
% of genes near scaffold ends (potentially truncated)	75.37 %
% of genes from short scaffolds (< 2000 bps)	94.03 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (65.672 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (32.090 % of family members)
Environment Ontology (ENVO)	Unclassified (52.985 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (73.881 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 33.33% Coil/Unstructured: 66.67%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 134 Family Scaffolds
PF07769	PsiF_repeat	2.99
PF08240	ADH_N	1.49
PF06627	DUF1153	1.49
PF13481	AAA_25	0.75
PF01695	IstB_IS21	0.75
PF07043	DUF1328	0.75
PF12006	DUF3500	0.75
PF02617	ClpS	0.75
PF13561	adh_short_C2	0.75
PF00733	Asn_synthase	0.75
PF00216	Bac_DNA_binding	0.75
PF01425	Amidase	0.75
PF05494	MlaC	0.75
PF12762	DDE_Tnp_IS1595	0.75
PF00903	Glyoxalase	0.75
PF02515	CoA_transf_3	0.75
PF00753	Lactamase_B	0.75

COG ID	Name	Functional Category	% Frequency in 134 Family Scaffolds
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.75
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	0.75
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	0.75
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	0.75
COG2127	ATP-dependent Clp protease adapter protein ClpS	Posttranslational modification, protein turnover, chaperones [O]	0.75
COG2854	Periplasmic subunit MlaC of the ABC-type intermembrane phospholipid transporter Mla	Cell wall/membrane/envelope biogenesis [M]	0.75
COG5487	Uncharacterized membrane protein YtjA, UPF0391 family	Function unknown [S]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.67 %
All Organisms	root	All Organisms	34.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.67 %
cellular organisms	root	All Organisms → cellular organisms	34.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.67 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	34.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.67 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	26.12 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.67 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	19.40 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.75 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.67 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	8.21 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.99 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.75 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.75 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.67 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	8.21 %
Rhodovibrionaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhodovibrionaceae	0.75 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.75 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.75 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.75 %
Roseobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	0.75 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.67 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	8.21 %
Rubellimicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Rubellimicrobium	0.75 %
Undibacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Undibacterium	0.75 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.75 %
Sinorhizobium/Ensifer group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group	0.75 %
Rhodovibrio	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhodovibrionaceae → Rhodovibrio	0.75 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.67 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	8.21 %
Rubellimicrobium aerolatum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Rubellimicrobium → Rubellimicrobium aerolatum	0.75 %
unclassified Undibacterium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Undibacterium → unclassified Undibacterium	0.75 %
Rhodovibrio salinarum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhodovibrionaceae → Rhodovibrio → Rhodovibrio salinarum	0.75 %
Ensifer	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Ensifer	0.75 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.75 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.67 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	8.21 %
Undibacterium sp. KW1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Undibacterium → unclassified Undibacterium → Undibacterium sp. KW1	0.75 %
Rubellimicrobium aerolatum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Rubellimicrobium → Rubellimicrobium aerolatum	0.75 %
Rhodovibrio salinarum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhodovibrionaceae → Rhodovibrio → Rhodovibrio salinarum	0.75 %
Ensifer	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Ensifer	0.75 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.75 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004082\|Ga0062384_100139481	Not Available	1359	Open in IMG/M
3300004633\|Ga0066395_10377903	All Organisms → cellular organisms → Bacteria → Proteobacteria	793	Open in IMG/M
3300005332\|Ga0066388_101959358	Not Available	1048	Open in IMG/M
3300005436\|Ga0070713_101322311	Not Available	698	Open in IMG/M
3300005437\|Ga0070710_10783385	All Organisms → cellular organisms → Bacteria → Proteobacteria	680	Open in IMG/M
3300005471\|Ga0070698_100132738	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2445	Open in IMG/M
3300005518\|Ga0070699_100814120	All Organisms → cellular organisms → Bacteria → Proteobacteria	855	Open in IMG/M
3300005536\|Ga0070697_101296162	Not Available	650	Open in IMG/M
3300005610\|Ga0070763_10243809	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	972	Open in IMG/M
3300005764\|Ga0066903_107967245	Not Available	544	Open in IMG/M
3300006175\|Ga0070712_100994797	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	725	Open in IMG/M
3300006175\|Ga0070712_101810826	Not Available	535	Open in IMG/M
3300006176\|Ga0070765_101322605	Not Available	680	Open in IMG/M
3300006854\|Ga0075425_102492423	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhodovibrionaceae → Rhodovibrio → Rhodovibrio salinarum	573	Open in IMG/M
3300007788\|Ga0099795_10429271	Not Available	605	Open in IMG/M
3300009089\|Ga0099828_10411442	Not Available	1220	Open in IMG/M
3300009143\|Ga0099792_10022053	All Organisms → cellular organisms → Bacteria	2851	Open in IMG/M
3300009792\|Ga0126374_10120245	Not Available	1534	Open in IMG/M
3300009792\|Ga0126374_10270254	Not Available	1122	Open in IMG/M
3300009792\|Ga0126374_10871053	Not Available	695	Open in IMG/M
3300010046\|Ga0126384_10176597	Not Available	1669	Open in IMG/M
3300010046\|Ga0126384_10752058	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	868	Open in IMG/M
3300010046\|Ga0126384_10855134	Not Available	818	Open in IMG/M
3300010046\|Ga0126384_11792038	Not Available	583	Open in IMG/M
3300010047\|Ga0126382_11020928	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	726	Open in IMG/M
3300010048\|Ga0126373_10071030	All Organisms → cellular organisms → Bacteria	3146	Open in IMG/M
3300010048\|Ga0126373_10239980	All Organisms → cellular organisms → Bacteria → Proteobacteria	1778	Open in IMG/M
3300010048\|Ga0126373_10833365	Not Available	985	Open in IMG/M
3300010048\|Ga0126373_12025401	Not Available	638	Open in IMG/M
3300010048\|Ga0126373_12398031	Not Available	587	Open in IMG/M
3300010159\|Ga0099796_10025120	All Organisms → cellular organisms → Bacteria	1877	Open in IMG/M
3300010358\|Ga0126370_10215492	Not Available	1463	Open in IMG/M
3300010358\|Ga0126370_11467209	Not Available	647	Open in IMG/M
3300010358\|Ga0126370_12127521	Not Available	551	Open in IMG/M
3300010358\|Ga0126370_12146162	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300010358\|Ga0126370_12573261	Not Available	508	Open in IMG/M
3300010359\|Ga0126376_10301160	Not Available	1394	Open in IMG/M
3300010359\|Ga0126376_10466777	All Organisms → cellular organisms → Bacteria	1158	Open in IMG/M
3300010359\|Ga0126376_11834550	Not Available	645	Open in IMG/M
3300010359\|Ga0126376_12809272	Not Available	536	Open in IMG/M
3300010360\|Ga0126372_10215802	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1613	Open in IMG/M
3300010360\|Ga0126372_11382245	Not Available	736	Open in IMG/M
3300010361\|Ga0126378_10292362	Not Available	1731	Open in IMG/M
3300010361\|Ga0126378_10645246	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Rubellimicrobium → Rubellimicrobium aerolatum	1172	Open in IMG/M
3300010361\|Ga0126378_10973704	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	953	Open in IMG/M
3300010361\|Ga0126378_11414299	Not Available	788	Open in IMG/M
3300010361\|Ga0126378_12234209	Not Available	624	Open in IMG/M
3300010361\|Ga0126378_12589162	Not Available	579	Open in IMG/M
3300010362\|Ga0126377_11048243	All Organisms → cellular organisms → Bacteria	883	Open in IMG/M
3300010376\|Ga0126381_100141432	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3146	Open in IMG/M
3300010376\|Ga0126381_100268250	All Organisms → cellular organisms → Bacteria	2323	Open in IMG/M
3300010376\|Ga0126381_101825107	Not Available	877	Open in IMG/M
3300010376\|Ga0126381_103192272	Not Available	648	Open in IMG/M
3300010376\|Ga0126381_104675588	Not Available	527	Open in IMG/M
3300010376\|Ga0126381_104967380	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	510	Open in IMG/M
3300010398\|Ga0126383_11849727	Not Available	692	Open in IMG/M
3300010403\|Ga0134123_13193358	Not Available	527	Open in IMG/M
3300012582\|Ga0137358_10205089	Not Available	1345	Open in IMG/M
3300012582\|Ga0137358_10894903	Not Available	582	Open in IMG/M
3300012917\|Ga0137395_10447600	All Organisms → cellular organisms → Bacteria	927	Open in IMG/M
3300012922\|Ga0137394_11543025	Not Available	522	Open in IMG/M
3300012944\|Ga0137410_10821452	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	782	Open in IMG/M
3300012944\|Ga0137410_11752539	Not Available	547	Open in IMG/M
3300012948\|Ga0126375_10295832	Not Available	1121	Open in IMG/M
3300012957\|Ga0164303_10817273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	643	Open in IMG/M
3300012960\|Ga0164301_11432853	Not Available	566	Open in IMG/M
3300012971\|Ga0126369_11155878	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	863	Open in IMG/M
3300016319\|Ga0182033_10811681	Not Available	825	Open in IMG/M
3300016341\|Ga0182035_10530433	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1009	Open in IMG/M
3300016357\|Ga0182032_10608450	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	910	Open in IMG/M
3300016357\|Ga0182032_10677602	Not Available	864	Open in IMG/M
3300016357\|Ga0182032_11042993	Not Available	700	Open in IMG/M
3300016404\|Ga0182037_11548956	Not Available	589	Open in IMG/M
3300016422\|Ga0182039_10818894	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	827	Open in IMG/M
3300016422\|Ga0182039_11943205	Not Available	541	Open in IMG/M
3300016445\|Ga0182038_10599475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	951	Open in IMG/M
3300020579\|Ga0210407_10749504	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Ensifer	755	Open in IMG/M
3300020579\|Ga0210407_10911484	All Organisms → cellular organisms → Bacteria → Proteobacteria	673	Open in IMG/M
3300020579\|Ga0210407_10928806	Not Available	666	Open in IMG/M
3300020579\|Ga0210407_11088879	Not Available	606	Open in IMG/M
3300020579\|Ga0210407_11313355	Not Available	540	Open in IMG/M
3300020580\|Ga0210403_11107226	Not Available	615	Open in IMG/M
3300020580\|Ga0210403_11348296	Not Available	543	Open in IMG/M
3300020581\|Ga0210399_10615581	Not Available	897	Open in IMG/M
3300020582\|Ga0210395_11303347	Not Available	532	Open in IMG/M
3300020583\|Ga0210401_10397996	Not Available	1239	Open in IMG/M
3300021168\|Ga0210406_11017589	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	615	Open in IMG/M
3300021170\|Ga0210400_10617592	Not Available	893	Open in IMG/M
3300021178\|Ga0210408_10090924	All Organisms → cellular organisms → Bacteria → Proteobacteria	2395	Open in IMG/M
3300021401\|Ga0210393_10856573	Not Available	738	Open in IMG/M
3300021403\|Ga0210397_10355105	Not Available	1087	Open in IMG/M
3300021406\|Ga0210386_10752445	Not Available	839	Open in IMG/M
3300021432\|Ga0210384_11323568	Not Available	625	Open in IMG/M
3300021432\|Ga0210384_11402718	Not Available	604	Open in IMG/M
3300021433\|Ga0210391_10899819	All Organisms → cellular organisms → Bacteria → Proteobacteria	691	Open in IMG/M
3300021474\|Ga0210390_11332767	Not Available	574	Open in IMG/M
3300021478\|Ga0210402_10347329	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Undibacterium → unclassified Undibacterium → Undibacterium sp. KW1	1376	Open in IMG/M
3300021560\|Ga0126371_10223713	Not Available	1987	Open in IMG/M
3300021560\|Ga0126371_10739217	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1131	Open in IMG/M
3300021560\|Ga0126371_12528477	Not Available	622	Open in IMG/M
3300025915\|Ga0207693_10655827	Not Available	815	Open in IMG/M
3300027548\|Ga0209523_1032053	Not Available	1055	Open in IMG/M
3300027737\|Ga0209038_10051656	All Organisms → cellular organisms → Bacteria → Proteobacteria	1230	Open in IMG/M
3300027787\|Ga0209074_10307149	Not Available	636	Open in IMG/M
3300027855\|Ga0209693_10093122	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1490	Open in IMG/M
3300027874\|Ga0209465_10136400	Not Available	1215	Open in IMG/M
3300027903\|Ga0209488_10319300	All Organisms → cellular organisms → Bacteria	1158	Open in IMG/M
3300027903\|Ga0209488_10419166	Not Available	989	Open in IMG/M
3300028047\|Ga0209526_10930190	Not Available	526	Open in IMG/M
3300028906\|Ga0308309_10873239	Not Available	781	Open in IMG/M
3300031231\|Ga0170824_111215229	Not Available	694	Open in IMG/M
3300031231\|Ga0170824_112928639	Not Available	809	Open in IMG/M
3300031474\|Ga0170818_104194880	Not Available	809	Open in IMG/M
3300031681\|Ga0318572_10900971	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	525	Open in IMG/M
3300031719\|Ga0306917_10885012	Not Available	699	Open in IMG/M
3300031736\|Ga0318501_10506841	Not Available	658	Open in IMG/M
3300031753\|Ga0307477_10239961	Not Available	1256	Open in IMG/M
3300031754\|Ga0307475_10928630	Not Available	686	Open in IMG/M
3300031770\|Ga0318521_10389086	Not Available	830	Open in IMG/M
3300031771\|Ga0318546_10976270	Not Available	596	Open in IMG/M
3300031823\|Ga0307478_10599160	All Organisms → cellular organisms → Bacteria	922	Open in IMG/M
3300031897\|Ga0318520_10869122	Not Available	567	Open in IMG/M
3300031912\|Ga0306921_10798149	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1078	Open in IMG/M
3300031947\|Ga0310909_11360922	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	569	Open in IMG/M
3300031954\|Ga0306926_11727666	Not Available	713	Open in IMG/M
3300031962\|Ga0307479_10682549	Not Available	1007	Open in IMG/M
3300032001\|Ga0306922_12012337	Not Available	562	Open in IMG/M
3300032001\|Ga0306922_12130897	Not Available	542	Open in IMG/M
3300032059\|Ga0318533_11347906	Not Available	521	Open in IMG/M
3300032076\|Ga0306924_10410788	Not Available	1549	Open in IMG/M
3300032076\|Ga0306924_10454648	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1462	Open in IMG/M
3300032076\|Ga0306924_11400263	Not Available	746	Open in IMG/M
3300032261\|Ga0306920_100110688	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4072	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.25%
Host-Associated	Host-Associated	0.75%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.76%
Aquatic	Environmental → Aquatic	1.49%
Plants	Host-Associated → Plants	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.76%
Freshwater	Environmental → Aquatic → Freshwater	1.49%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	83.58%
Loam	Environmental → Terrestrial → Soil → Loam	14.18%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.49%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	43.28%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	39.55%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.21%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.97%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.49%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	32.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.43%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.97%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.73%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.99%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.99%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.24%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.49%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.49%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.49%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.75%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300027548	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062384_1001394813	3300004082	Bog Forest Soil	MIEGRAMLRYIGALYRSALYPLSEDGVAIDHVLGSKLPTATRNENLVMPLIRTKWL*
Ga0066395_103779032	3300004633	Tropical Forest Soil	LRGCAVLYRSGLFPLSEDGVTIDHVLGAANHRPLRESEKLLAPFMRMKWL*
Ga0066388_1019593583	3300005332	Tropical Forest Soil	MIEGRAMLCDIAVLYRTALYPLSEDGILIDHVLGAANYRPIGGNEYPIAPLIRTKWL*
Ga0066388_1032410761	3300005332	Tropical Forest Soil	FRGVGVLYRGALYPLSEDGDAIDHVLGSANYRPLRGNGDWMKPLIRTKWL*
Ga0070713_1013223111	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	EGVLLSHVPQVLSERRCLVIEGRARLREVGILYRSALYPLADDGIAIDHLLGAANYRPLRENEHLRTPFVRTKWL*
Ga0070710_107833852	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	SHLPLVLSEHRCLMIEGRATLRGSGVLYRSALFPLSEDGSAIDHALGAANHRPLRENEELITPLIRTKWL*
Ga0070698_1001327385	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	RLRDLDILYRSALYPLSEDGIAIDHVLGAANYRPLRENEDSIAPFVRTKWL*
Ga0070699_1008141201	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	LMIEGRATLRGSGVLYRSALFPLSEDGVAIDHVLGAANHRLLRENEELMAPLMRTKWL*
Ga0070697_1012961622	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VLLSHLPQVLSERRCLMIEGLTRLRDLDILYRSALYPLAEDGIAIDHVLGAANYRPLRENEDSIAPFVRTKWL*
Ga0070763_102438091	3300005610	Soil	MIEGRARLREIGILYRSALYPLSDDGIAIDHMLGAANYRPLREHEYLITPLVRTKWL*
Ga0066903_1079672452	3300005764	Tropical Forest Soil	EGRATLRGVGILYRSALYPLSEDGVAIDHVLGAANYRPLRENEPLIVPLVQTKWL*
Ga0070712_1009947972	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MIEGRARLREVGILYRSALYPLADDGIAIDHLLGAANYRPLRENEHLRTPLVRTKWL*
Ga0070712_1018108262	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	LRDIGVLYRSALYPLSEDGVAIDHVLGAANYRPLRENEKLIMPLIRTKWL*
Ga0070765_1013226053	3300006176	Soil	MIEGITRLRYLDILYRSALYPLSEDGIAIDHVLGAANYRPLRKNENSIAPFVRTKWL*
Ga0075425_1024924231	3300006854	Populus Rhizosphere	LSECRCLMIEGRARLRDIGILYRSALYPLSDDGTAIDHVLGAANYRPLRENKDLILPLFRTKWL*
Ga0099795_104292711	3300007788	Vadose Zone Soil	ARLREIGILYRSALYPLSDDGIAIDHVLGAANYRPLHANEHLRTPFVRTKWL*
Ga0099828_104114422	3300009089	Vadose Zone Soil	MIEGRATLRGSGVLYRSALFPLSEDGVAIDHVLGAANHRLLRENEELIAPLIRTTWL*
Ga0099792_100220531	3300009143	Vadose Zone Soil	MIEGRATLRGSGVLYRSALFPLSEDGVAIDHVLGAANHRLLRENEELLVLSIRIKWL*
Ga0126374_101202452	3300009792	Tropical Forest Soil	LAGVLLSYLPQVLSERRCLMIEGWARLREISICALYPLSDDGLAIDHVLGAANYRPLRENEHLRMPFVRTKWL*
Ga0126374_102702541	3300009792	Tropical Forest Soil	SLAGVLLSYLPQVLSECRCLMIEGRARLRDIGILYRSALYPLSDDGIAIDHVLGAANYRPLRENKDLILPLIRTKWL*
Ga0126374_108710532	3300009792	Tropical Forest Soil	RDLDILYRSALYPLSEDGILIDHVLGAANYRPLGKNENSAPFVRPNGFKS*
Ga0126384_101765971	3300010046	Tropical Forest Soil	MIEGRATLRGSGVLYRSALYPLSQDGVAIDHVLGVANHRPLREKEELITPLIRTKWL*
Ga0126384_107520581	3300010046	Tropical Forest Soil	MIEGRTKLRDLDILYRSGLYPLSDDGIAIDHVLGAANYRPLRENEDSTASFVRTKWL*
Ga0126384_108551341	3300010046	Tropical Forest Soil	MIEGDTRLRDIGILYRSALFPLSDDSIIIDHVLGAANYRPLRENEYPITPLVRTKWL*
Ga0126384_117920381	3300010046	Tropical Forest Soil	IEGSVRLRDIGILYRSALFPLSDDGIIIDHVLGAANYRPLRENEYPITPLVRTKWL*
Ga0126382_110209281	3300010047	Tropical Forest Soil	MIEGRARLRDIGILYRSALYPLSDDGTAIDHVLGAANYRPLRENKDLILPLIRTKWL*
Ga0126373_100710303	3300010048	Tropical Forest Soil	MLDMAGSQGRQIEGRATLRGCGVLYRSALCPLSEDGTVIDYVLGAANWRPLRENDQRISPLVRTKWL*
Ga0126373_102399803	3300010048	Tropical Forest Soil	ARVLLSLLPQVVSERRCLMVEGSTRLFDVDILYRSALCPLSADGISIDHVLGAANYRPLRENEGLITPLIRTQWL*
Ga0126373_108333651	3300010048	Tropical Forest Soil	RRCLMIEGRTKLREIDIVYRSGLYPLSDEGIAIDHVLGAANYRPLRENEDLRAPLVLTKWLSRANVC*
Ga0126373_120254011	3300010048	Tropical Forest Soil	MIEGRATLRGSGVLYRSALFPLSQDGVAIDHVLGAANHRLLRENEELIVPLVQTKWL*
Ga0126373_123980312	3300010048	Tropical Forest Soil	ERRCLMIEGSARLRDIDILYRSGLYPLSDDGIAIDHVLGAANYRPLRNNEDLGAPFVRTKWL*
Ga0099796_100251202	3300010159	Vadose Zone Soil	MIEGRATLRGSGVLYRSALFPLSEDGVAIDHVLGVANHRLLLGNEELLTPLIRTKWL*
Ga0126370_102154922	3300010358	Tropical Forest Soil	VFLSHLPLVLSERRSVMIEGSARLRDIGILYRSGLYPLSDDGIEIDHVLGAASYRPLRENEDPVTPLVRTKWL*
Ga0126370_114672092	3300010358	Tropical Forest Soil	MLDMAGSQGRQIEGRATLCGCGVLYRSALYPLSEDGTVIDYVLGAANWRPLRENEQ
Ga0126370_121275211	3300010358	Tropical Forest Soil	RCLMIEGRTKLREIDIVYRSGLYPLSDEGIAIDHVLGAANYRPLRENEDLRAPLVLTKWLSRANVC*
Ga0126370_121461622	3300010358	Tropical Forest Soil	FRQIGILYRGALYPLSDDGIVIDHVLGAANYRPLRENEYPLPPLVRIKWL*
Ga0126370_125732612	3300010358	Tropical Forest Soil	AGVLLSHLPQVLAERRCLMIEGSARLRDIGILYRGGLYPLSDDGIAIDHVLGAANYRPLRKNEDLGVPFVRTKWL*
Ga0126376_103011601	3300010359	Tropical Forest Soil	MIEGRATLRGSGVLYRSALFPLSQDGVAIDHVLGAANHRLLRENEELIT
Ga0126376_104667773	3300010359	Tropical Forest Soil	MIEGSARLRDIDILYRSGLYPLSDDGIAIDHMLGAANYRSLRKNEDLGAPFVRTNWL*
Ga0126376_118345502	3300010359	Tropical Forest Soil	MIEGSAKLRDIGILYRSGLYPLSDDGIAIDHVLGAANYRPLRENEYPVTALVRTKWL*
Ga0126376_128092722	3300010359	Tropical Forest Soil	MIEGRAMLCDIAVLYRTALYPLSEDGILIDHVLGAANYRPIRGNEYPIAPLIRTKWL*
Ga0126372_102158022	3300010360	Tropical Forest Soil	VHSSDESLAGVLLSHLPQVLAERRCLMIEGSARLRDIGILYRGSLYPLSDDGIAIDHVLGAANYRPLRENEDLGAPFVRTKWL*
Ga0126372_113822451	3300010360	Tropical Forest Soil	GSARLRDIGILYRGGLYPLSDDGIAIDHVLGAANYRPLREHEDLGAPFVRTKWL*
Ga0126378_102923624	3300010361	Tropical Forest Soil	VGRIRPAKLIEGSARLRDIGILYRSGLYPLSDDGIEIDHVLGAANYRPLRENEDPVTPLVRTKWL*
Ga0126378_106452463	3300010361	Tropical Forest Soil	VLLSHLPQVVSERRCLMIEGRATFCDIAVLYRSALYPLSEDGIAIDHVLGAANYRPIGENEYPIAPLVRTKWL*
Ga0126378_109737042	3300010361	Tropical Forest Soil	LPQVLAERRCLMIEGSARLRDIGILYRGGLYPLSDDGIAIDHVLGAANYRPLRENEDLGAPFVRTKWL*
Ga0126378_114142991	3300010361	Tropical Forest Soil	GRATLHGSGVLYRSALFPLSEDGVAIDHVLGAANHRLLREKEELITPLIRTKWL*
Ga0126378_122342092	3300010361	Tropical Forest Soil	RTRLDDIGILYRSTLYPLSDDGIVIDHVLGAANYRPFREDEYPVTPLVRTKWL*
Ga0126378_125891621	3300010361	Tropical Forest Soil	LVLSERRCLMIEGRATLRGSGVLYRSALFPLSQDGVAIDHVLGAANHRLLRKNEELIAPLVQTKWV*
Ga0126377_110482431	3300010362	Tropical Forest Soil	TFCDIAVLYRSALYPLSEDGVAIDHVLGAANYRPLGENEYPIAPLVRTKWL*
Ga0126381_1001414323	3300010376	Tropical Forest Soil	MLDMAGSQGRQIEGRATLCGCGVLYRSALYPLSEDGTVIDYVLGAANWRPLRENEQRISPLVRTKWL*
Ga0126381_1002682502	3300010376	Tropical Forest Soil	MIEGRARLRGVGILYRSALYPLSKDGVAIDHVLGAANHRLLHENEELIAPLIRTKWL*
Ga0126381_1018251071	3300010376	Tropical Forest Soil	EGRTKLRDLDILYRSGLYPLSDDGIAIDHVLGAANYRPLRENEDSTASFVRTKWL*
Ga0126381_1031922721	3300010376	Tropical Forest Soil	LMIEGRAMLCDIAVLYRTALYPLSEDGILINHVLGAASYRPIRGNEYPIAPLIRTKWL*
Ga0126381_1046755881	3300010376	Tropical Forest Soil	MVEGSTRLFDLDILYRSALCPLSADGISIDHVLGAANYRPLRKNENSIWPFLRAQW
Ga0126381_1049673801	3300010376	Tropical Forest Soil	MIEGRATLRGSGVLYRSALFPLSQDGAAIDHVLGAANHRLLRENEELITPLVRTKWL*
Ga0126383_118497273	3300010398	Tropical Forest Soil	LLSHLPQVVSERRCLMIEGRATFCDIAVLYRSALYPLSEDGIAIDHVLGAANYRPIGENEYPIAPLVRTKWL*
Ga0134123_131933581	3300010403	Terrestrial Soil	REVGILYRSALYPLADDGIAIDHLLGAANYRPLRENEHLRTPFVRTKWL*
Ga0137358_102050892	3300012582	Vadose Zone Soil	MIEGRATLRDIGVLYRSALYPLSEDGVAIDHVLGAANYRALRENEKLIMPLIRTKWL*
Ga0137358_108949031	3300012582	Vadose Zone Soil	MIEGRATLRGSGVLYRSALFPLSEDGVAIDHVLGAANHRLLRENEELLAPLIRTKWL*
Ga0137395_104476001	3300012917	Vadose Zone Soil	RRCLMIEGRATLRGSGVLYRSALFPLSEDGVAIDHVLGAANHRLLRENEQLIAPLIRTKWL*
Ga0137394_115430251	3300012922	Vadose Zone Soil	RRCLMIEGRATLRGSGVLYRSALFPLSEGGVAVDHVLGAANHRLLRENEALITPLVRTKWL*
Ga0137410_108214521	3300012944	Vadose Zone Soil	MIEGRATLRGSGVLYRSALFPLSEDGVAIDHVLGAANHRLLLGNEELLTPLIRTKWL*
Ga0137410_117525392	3300012944	Vadose Zone Soil	ATLRGTDVLYRSALFPLSEDGLAIGHVLGAANHRLLRENEQLITPLIRTKWL*
Ga0126375_102958322	3300012948	Tropical Forest Soil	MIEGRATFCDIAVLYRSALYPLSEDGVAIDHVLGAANYRPLGENERLIMPLIRTKWL*
Ga0164303_108172731	3300012957	Soil	MPYEGSAKSPTLRGSGVVYRSALFPLSKDGVAIDHVLGAASHRPLRENEELMA
Ga0164301_114328532	3300012960	Soil	MIEGRATLRDIGVLYRSALYPLSEDGVAIDHVLGAANYRPLRENEKLAMPLIRTKWL*
Ga0126369_111558781	3300012971	Tropical Forest Soil	AGALLSYLPLVLSECRCLMIEGRARLSDISILYGSALYPLSDDGIVIDHVLGAASYRPLRKNENSIRPFVRTKWL*
Ga0182033_108116812	3300016319	Soil	SERRCLMIEGRARLRGIGVVYRSALYPLSEDGVAIDHLLGAANYRPLREHEGQTGRVTRTRWL
Ga0182035_105304332	3300016341	Soil	LSERRCLMIEGRATLRGSGVLYRSALYPLSEDGVAIDHALGAANYRPLRENEELIAPLIRTKWL
Ga0182032_106084503	3300016357	Soil	SEGRCLMIEGRVTLRGSGVLYRGALYPLSDHGSTIDHVLGAANSRPLRENEELISSDIRTKWL
Ga0182032_106776022	3300016357	Soil	ENLSFVNSPDERLAGVLLSHLPLVLSERRCLMMEGRTKLRDLDILCRSGLYPLSDDGIAIDHVLGAANYRPLRKNENSIAPFVRTKWP
Ga0182032_110429931	3300016357	Soil	HCPNDSLAGVLLSHLPQVLSERRCLMIEGRATLRGSGVLYRSALYPLSEDGVAIDHALGAANYRPLRENEELIAPLIRTKWL
Ga0182037_115489562	3300016404	Soil	MIEGRATLRGSGVLYRGALYPLSDNNSEIDHVLGAANCRPLREN
Ga0182039_108188943	3300016422	Soil	ERRVTLRGSGVLYRGALYPLSDHGSTIDHVLGAANSRPLRENEELISSDIRTKWL
Ga0182039_119432051	3300016422	Soil	FTHRPDESLAGVLLAHLPQVLSERRCLMIEGITRFRDLDILYRSGLYPLSDDGIAIDHMLGAANYRPVREKEASTAPFVRTKWL
Ga0182038_105994751	3300016445	Soil	RRCLMIEGIIRLRDLDILYRSALYPLSDDGSAIDHVLGAANYRPLRDNEASIAPFVRTNW
Ga0210407_107495041	3300020579	Soil	LSERRFLMIEGRARLREVGILYRSALHPLSDDGIAIDHALGAANYRPLHENEHLRTPLVRTKWL
Ga0210407_109114841	3300020579	Soil	MIEGRARLREVGILYRSALYPLADDGIAIDHLLGAANYRPLRENEHLRTPLVRTKWL
Ga0210407_109288061	3300020579	Soil	ERRCLMIEGRARLREIGILYRSALYPLSDDGIAIDHVLGAANYRPLRENEHLRTPLVWTKWL
Ga0210407_110888791	3300020579	Soil	HLPQVLSERRCLMIEGITRLRYLDILYRSALYPLSEDGILIDHVLGAANYRPLRKNENSIAPFVRTKWL
Ga0210407_113133551	3300020579	Soil	QVLSERRCLMIEGRATLRGSGVLYRSALFPLSEDGIAIDHVLGAVNHRLLRENEQLIAPLIRTKWL
Ga0210403_111072261	3300020580	Soil	VLLSHLPQVLSERRFLMIEGRARLREVGILYRSALHPLSDDGIAIDHALGAANYRPLHENEHLRTPLVRTKWL
Ga0210403_113482961	3300020580	Soil	AARLRGVGILYRSALYPLSEHGVAIDHMLGAASHRPMRENEELMAPLIRTNWL
Ga0210399_106155811	3300020581	Soil	ILTIARLREVGILYRSALYPLSDDGTAIDHVLGAANYRPLCENEHLRTPLIRTKWL
Ga0210395_113033471	3300020582	Soil	CLMIEGRARLRQVGILYRSALYPLSEDGVAIDHVLGAANYRPLLENEELMAPLIRTKRL
Ga0210401_103979961	3300020583	Soil	VLSERRCLMIEGRARLREVGILYRSALYPLADDGIAIDHVLGAANYRPLRENEHLRTPLVRTKWL
Ga0210406_110175892	3300021168	Soil	LAGVLLSHLPQVLSERRFLMIEGRARLREVGILYRSALHPLSDDGIAIDHALGAANYRPLHENEHLRTPLVRTKWL
Ga0210400_106175921	3300021170	Soil	RHQILTIARLREVGILYRSALYPLSDDGTAIDHVLGAANYRPLCENEHLRTPLIRTKWL
Ga0210408_100909243	3300021178	Soil	MPYEGSAKSPTLRGSGVVYRSALFPLSKDGVAIDHVLGAASHRPLRENEELMAPLIRRKW
Ga0210393_108565731	3300021401	Soil	SERRCLMIEGRARLREVGILYRSALYPLSDDGIAIDHVLGAANYRPLRENEHLRTPLVRTKWL
Ga0210397_103551052	3300021403	Soil	LREIGILYRSALYPLSDDGIAIDHVLGAANYRPLRENEHLRTPLVRTKWL
Ga0210386_107524452	3300021406	Soil	LCWRKFITSALPNDNLAGVLLSHLPLVLSEHRCLMIEGRATLRGSGVLYRSALFPLSEDGSAIDHALGAANHRPLRENEELITPLIRTKWL
Ga0210384_113235682	3300021432	Soil	GVLLSHLPLVLSEHRCLMIEGRATLRGSGVLYRSALFPLSEDGSAIDHALGAANHRPLRENEELITPLIRTKWL
Ga0210384_114027181	3300021432	Soil	CLMIEGRATLRGSGVLYRSALFPLSEDGVAIDNVLGAANHRLLRENEELLAPLIRTKWL
Ga0210391_108998191	3300021433	Soil	SHVPQVLSERRCLMIEGRARLREVGILYRSALYPLADDGIAIDHVLGAANYRPLRENEHLRTPLVRTKWL
Ga0210390_113327671	3300021474	Soil	ARLRDMGILYRSALYPLSDDGIVIDHVLGVANYRPLRENEYPITPLVRTKWV
Ga0210402_103473292	3300021478	Soil	ERRCLMIEGLTRFRDLDILYRSALYPLSEDGIAIDHVLGAANYRPLRENENSIAPFVRTKWL
Ga0126371_102237131	3300021560	Tropical Forest Soil	MIEGRATLRGTGVLYRSALYPLSENGVAIDHVLGAATYRPLHENEQLITPLIRTTWL
Ga0126371_107392171	3300021560	Tropical Forest Soil	EGSARLRDIGILYRSGLYPLSDDGIEIDHVLGAANYRPLPENEDLGAPFVRTKWL
Ga0126371_125284772	3300021560	Tropical Forest Soil	MIEGRATFCDIAVLYRSALYPLSEDGVAIDHVLGAANYRPLGENEYPIAPLVRTKWL
Ga0207693_106558271	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	CLMIEGRASLRDIGVLYRSALYPLSEDGVAIDHVLGAANYRPLRENEKLIMPLIRTKWL
Ga0209523_10320532	3300027548	Forest Soil	HLPQVVSERRCLMIEGITRLRDADILYRSALYPLSEDGIAIDHVLGAANYRPLRKNENSIAPFVRTKWL
Ga0209038_100516561	3300027737	Bog Forest Soil	LLSYLPQVISECRCLMIEGRASLRDIGILYRSALYPLSDDGIAIDHVLGAANYRPLRENKDLILPLIRTKWL
Ga0209074_103071491	3300027787	Agricultural Soil	MCRRFSCLVIEGRARLREVGILYRSALYPLADDGIAIDHLLGAASYRPLHEHEHLRT
Ga0209693_100931223	3300027855	Soil	MIEGRARLREIGILYRSALYPLSDDGIAIDHMLGAANYRPLREHEYLITPLVRTKWL
Ga0209465_101364002	3300027874	Tropical Forest Soil	LSERRCLMIEGRARLRGVGILYRSALYPLSKDGVAIDHVLGAANHRLLHENEELIAPLIRTKWL
Ga0209488_103193001	3300027903	Vadose Zone Soil	RCLMIEGRARLREVGILYRSALYPLADDGIAIDHVLGAANYRPLRENEHLRTPLVRTKWL
Ga0209488_104191661	3300027903	Vadose Zone Soil	QVLSERRCLMIEGRATLRGTGVLYRSALFPLSEDGVAIGHVLGAANHRLLRENEELLAPLIRTKWL
Ga0209526_109301902	3300028047	Forest Soil	LMIEGRARLREIGILYRSALYPLSDDGIAIDHMLGAANYRPLREHEYLITPLVRTKWL
Ga0308309_108732392	3300028906	Soil	ATLRGIGVLYRSALFPLSEDGVAIDHVLGAANHRLLRENEELLAPLIRTKWL
Ga0170824_1112152291	3300031231	Forest Soil	ERRCLMIEGRARLREIGILYRSALYPLADDGIAIDHVLGAANYRPVGENEKLIMPLIRTKWL
Ga0170824_1129286391	3300031231	Forest Soil	RRCLMIEGRATLRGSGVLCRSALFPLSEDGVAIDHVLGAANHRLLRENEELLAPLIRTKW
Ga0170818_1041948801	3300031474	Forest Soil	RRCLMIEGRATLRGSGVLCRSALFPLSEDGVAIDHVLGAANHRLLRENEELLAPLIPTKW
Ga0318572_109009711	3300031681	Soil	KGRCLMIEGRETLRGNGVLYRGALYPLSYDGSTIDHVLGAANCRPQRENEELISPQIRTKWL
Ga0306917_108850122	3300031719	Soil	EGRATLRGSGVLYRNALYPLSEDGVAIDHVLVAANYRPLRENEELIAPLIRTKWL
Ga0318501_105068412	3300031736	Soil	PQVLSERRCLMIEGRATLRGSGVLYRSALYPLSEDGVAIDHALGAANYRPLRENEELIAPLIRTKWL
Ga0307477_102399611	3300031753	Hardwood Forest Soil	RRCLMIEGRTRLREVGIVYRSALYPLSDDGIAIDHVLAAASYLPLRENEHLRTPLVRTKW
Ga0307475_109286302	3300031754	Hardwood Forest Soil	AGILLSHLPQILSERRCLMIEGRGRLHGIGILYRSALYPLSESGVAIDHVLGAANYSPLRENEELLLPLLRTKWL
Ga0318521_103890861	3300031770	Soil	IEGRARFLDTGIRYRSALYPLSDDGIIIDHVLGAANYENEYPLTPLVRMKWL
Ga0318546_109762702	3300031771	Soil	LMIEGRARLREIDIVYRSGLYQLSDDGIAIDHVLGTANYRPLRENEYPLTPLVWTKWL
Ga0307478_105991603	3300031823	Hardwood Forest Soil	EGRARLRDMGILYRSALYPLSDDGIVIDHVLGVANYRPLRENEYPITPLVRTKWV
Ga0318520_108691221	3300031897	Soil	SGVLFRGGLFPLSQDGVAIDYVLGAANHRLLWKNEAPVRPEVRRKWL
Ga0306921_107981492	3300031912	Soil	RCLMIEGFTRFRDLDILYRSALYPLSEDGILIDHVLGAASYRPLRKNENSIRPFVRTKWL
Ga0310909_113609222	3300031947	Soil	RSADDGLAGVLLSYLPQVVSEGRCLMIEGRATLRGSGVLYRGALYPLSDNNSEIDHVLGAANCRPLRENEELISPHIRTKWL
Ga0306926_117276661	3300031954	Soil	SHLPQVLSERGCLMIEGRMKLRDLNILYRSGLYPLSDDGIAIDHVLGAANYRPLRKNENSIAPFVRTKWL
Ga0307479_106825491	3300031962	Hardwood Forest Soil	RCLMIEGRARLREVGILYRSALFPLSDDGIVIDHVLGAANYRPLRENESLVAPLVRTKWL
Ga0306922_120123371	3300032001	Soil	PVLSERRCLMIEGRATLRGSGVLYRNALYPLSEDGVAIDHVLVAANYRPLRENEELIAPLIRTKWL
Ga0306922_121308971	3300032001	Soil	TLRGLGVLYRSALFPLSEDGGAIDHVLGAANHRQLRENEELMAPLIRTKWL
Ga0318533_113479062	3300032059	Soil	VLSERRCLMIEGRATLRGSGVLYRSALYPLSEDGVAIDHALGAANYRPLRENEELIAPLIRTKWL
Ga0306924_104107883	3300032076	Soil	IEGRATLCDIAVLYRSALYPLSEDGIAIDHVLGAANYRPIGENEYPIAPLVRTKWL
Ga0306924_104546481	3300032076	Soil	GVLLPHLPRVLSEGRCLMIEGRATLRGSGVLYRGALYPLSDDDSAIDHMLGAANCRPLRENEELISSYIRTRWL
Ga0306924_114002631	3300032076	Soil	LRGSGVLYRSALFPLSENGVAIDHVLGAANYRPLLENEVLMAPLIRTKWL
Ga0306920_1001106881	3300032261	Soil	GRGRLHGIGILYRSALYPLSESGVAIDHVLGAANYRPLRENEELLLPLLRTKWL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F059206

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences