Metagenome Family F059305

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F059305
Family Type	Metagenome
Number of Sequences	134
Average Sequence Length	68 residues
Representative Sequence	MKTFLIIFWIHQAIFGLSSLGAVLNLLLEGGTTNQSNLVPLLLAMIAGSLTWGFGFVMAERLRSWASQA
Number of Associated Samples	71
Number of Associated Scaffolds	134

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	70.90 %
% of genes near scaffold ends (potentially truncated)	52.99 %
% of genes from short scaffolds (< 2000 bps)	86.57 %
Associated GOLD sequencing projects	59
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (70.896 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (32.836 % of family members)
Environment Ontology (ENVO)	Unclassified (58.955 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (67.164 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 82.61% β-sheet: 0.00% Coil/Unstructured: 17.39%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 134 Family Scaffolds
PF01521	Fe-S_biosyn	2.24
PF04392	ABC_sub_bind	1.49
PF14659	Phage_int_SAM_3	1.49
PF11146	DUF2905	0.75
PF11064	DUF2865	0.75
PF00293	NUDIX	0.75
PF10691	DUF2497	0.75
PF00042	Globin	0.75
PF04480	DUF559	0.75
PF08308	PEGA	0.75
PF12706	Lactamase_B_2	0.75
PF03412	Peptidase_C39	0.75
PF01904	DUF72	0.75
PF08857	ParBc_2	0.75
PF04828	GFA	0.75
PF00326	Peptidase_S9	0.75
PF14224	DUF4331	0.75
PF00216	Bac_DNA_binding	0.75
PF02653	BPD_transp_2	0.75

COG ID	Name	Functional Category	% Frequency in 134 Family Scaffolds
COG0316	Fe-S cluster assembly iron-binding protein IscA	Posttranslational modification, protein turnover, chaperones [O]	2.24
COG4841	Uncharacterized conserved protein YneR, related to HesB/YadR/YfhF family	Function unknown [S]	2.24
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	1.49
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	0.75
COG1017	Hemoglobin-like flavoprotein	Energy production and conversion [C]	0.75
COG1801	Sugar isomerase-related protein YecE, UPF0759/DUF72 family	General function prediction only [R]	0.75
COG3791	Uncharacterized conserved protein	Function unknown [S]	0.75
COG4318	Uncharacterized conserved protein	Function unknown [S]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.90 %
All Organisms	root	All Organisms	29.10 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.90 %
cellular organisms	root	All Organisms → cellular organisms	29.10 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.90 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	29.10 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	22.39 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.90 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	17.91 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.49 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.75 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.90 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	11.94 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	1.49 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.49 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.75 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.90 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	4.48 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.73 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	1.49 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.75 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.75 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.75 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	0.75 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.90 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	4.48 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.73 %
Stenotrophomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Stenotrophomonas	1.49 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.75 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.75 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.75 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.75 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.90 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	4.48 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	1.49 %
Stenotrophomonas maltophilia group	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Stenotrophomonas → Stenotrophomonas maltophilia group	1.49 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.75 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.75 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.75 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.75 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.90 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	4.48 %
Bradyrhizobium sp. ARR65	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. ARR65	1.49 %
Stenotrophomonas maltophilia	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Stenotrophomonas → Stenotrophomonas maltophilia group → Stenotrophomonas maltophilia	1.49 %
Rhodoplanes sp. JGI PP 4-B12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	0.75 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.75 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.75 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.75 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000580\|AF_2010_repII_A01DRAFT_1039990	Not Available	727	Open in IMG/M
3300000816\|AF_2010_repII_A10DRAFT_1008555	Not Available	1070	Open in IMG/M
3300000816\|AF_2010_repII_A10DRAFT_1032898	Not Available	547	Open in IMG/M
3300004633\|Ga0066395_10026123	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2383	Open in IMG/M
3300004633\|Ga0066395_10120881	All Organisms → cellular organisms → Bacteria	1291	Open in IMG/M
3300005332\|Ga0066388_100043059	Not Available	4501	Open in IMG/M
3300005332\|Ga0066388_100543490	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1792	Open in IMG/M
3300005332\|Ga0066388_100551384	Not Available	1782	Open in IMG/M
3300005332\|Ga0066388_100581390	Not Available	1745	Open in IMG/M
3300005332\|Ga0066388_105064316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	669	Open in IMG/M
3300005332\|Ga0066388_105764089	Not Available	626	Open in IMG/M
3300005332\|Ga0066388_108203486	Not Available	521	Open in IMG/M
3300005764\|Ga0066903_101455818	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. ARR65	1290	Open in IMG/M
3300005764\|Ga0066903_103121971	Not Available	896	Open in IMG/M
3300005764\|Ga0066903_104400530	Not Available	752	Open in IMG/M
3300005764\|Ga0066903_104946391	Not Available	707	Open in IMG/M
3300005764\|Ga0066903_105299389	Not Available	682	Open in IMG/M
3300005764\|Ga0066903_106304635	Not Available	619	Open in IMG/M
3300005764\|Ga0066903_107255505	Not Available	573	Open in IMG/M
3300005764\|Ga0066903_108863549	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	510	Open in IMG/M
3300006047\|Ga0075024_100316224	Not Available	770	Open in IMG/M
3300006052\|Ga0075029_100357046	All Organisms → cellular organisms → Bacteria	943	Open in IMG/M
3300006172\|Ga0075018_10277568	Not Available	819	Open in IMG/M
3300006174\|Ga0075014_100784212	Not Available	561	Open in IMG/M
3300009792\|Ga0126374_10410443	Not Available	950	Open in IMG/M
3300010043\|Ga0126380_11226569	Not Available	648	Open in IMG/M
3300010047\|Ga0126382_11336673	Not Available	650	Open in IMG/M
3300010048\|Ga0126373_10333635	Not Available	1523	Open in IMG/M
3300010048\|Ga0126373_11480350	Not Available	744	Open in IMG/M
3300010048\|Ga0126373_12155271	Not Available	619	Open in IMG/M
3300010048\|Ga0126373_12401971	Not Available	587	Open in IMG/M
3300010358\|Ga0126370_10297701	Not Available	1278	Open in IMG/M
3300010358\|Ga0126370_12222597	Not Available	541	Open in IMG/M
3300010359\|Ga0126376_10874405	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. ARR65	886	Open in IMG/M
3300010359\|Ga0126376_11545760	Not Available	694	Open in IMG/M
3300010361\|Ga0126378_10071069	Not Available	3333	Open in IMG/M
3300010361\|Ga0126378_10199104	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	2079	Open in IMG/M
3300010361\|Ga0126378_10225879	All Organisms → cellular organisms → Bacteria	1957	Open in IMG/M
3300010366\|Ga0126379_11322668	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	827	Open in IMG/M
3300010366\|Ga0126379_13892481	Not Available	500	Open in IMG/M
3300010398\|Ga0126383_13463842	Not Available	515	Open in IMG/M
3300010863\|Ga0124850_1013096	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	2637	Open in IMG/M
3300010868\|Ga0124844_1132208	Not Available	950	Open in IMG/M
3300016270\|Ga0182036_10802652	Not Available	767	Open in IMG/M
3300016270\|Ga0182036_11255325	Not Available	617	Open in IMG/M
3300016294\|Ga0182041_10088790	Not Available	2235	Open in IMG/M
3300016294\|Ga0182041_11642756	Not Available	594	Open in IMG/M
3300016319\|Ga0182033_10081541	Not Available	2317	Open in IMG/M
3300016319\|Ga0182033_10123793	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Stenotrophomonas → Stenotrophomonas maltophilia group → Stenotrophomonas maltophilia	1950	Open in IMG/M
3300016319\|Ga0182033_10406442	Not Available	1152	Open in IMG/M
3300016319\|Ga0182033_11441859	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	620	Open in IMG/M
3300016341\|Ga0182035_11026847	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	731	Open in IMG/M
3300016357\|Ga0182032_10238830	Not Available	1406	Open in IMG/M
3300016357\|Ga0182032_10473152	Not Available	1026	Open in IMG/M
3300016371\|Ga0182034_10214972	Not Available	1495	Open in IMG/M
3300016371\|Ga0182034_10276126	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1337	Open in IMG/M
3300016371\|Ga0182034_11020504	Not Available	715	Open in IMG/M
3300016387\|Ga0182040_10110659	All Organisms → cellular organisms → Bacteria	1884	Open in IMG/M
3300016387\|Ga0182040_10607980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	886	Open in IMG/M
3300016422\|Ga0182039_10769763	Not Available	853	Open in IMG/M
3300016422\|Ga0182039_11534226	Not Available	607	Open in IMG/M
3300016445\|Ga0182038_10193894	Not Available	1593	Open in IMG/M
3300016445\|Ga0182038_10224011	Not Available	1496	Open in IMG/M
3300016445\|Ga0182038_11164628	Not Available	686	Open in IMG/M
3300017959\|Ga0187779_10126966	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1557	Open in IMG/M
3300021560\|Ga0126371_10037449	All Organisms → cellular organisms → Bacteria	4581	Open in IMG/M
3300021560\|Ga0126371_10441358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1447	Open in IMG/M
3300021560\|Ga0126371_11412330	All Organisms → cellular organisms → Bacteria	827	Open in IMG/M
3300025898\|Ga0207692_10213419	All Organisms → cellular organisms → Bacteria	1141	Open in IMG/M
3300027063\|Ga0207762_1049713	Not Available	616	Open in IMG/M
3300027874\|Ga0209465_10037468	Not Available	2299	Open in IMG/M
3300027874\|Ga0209465_10506177	Not Available	603	Open in IMG/M
3300027910\|Ga0209583_10555124	Not Available	577	Open in IMG/M
3300031128\|Ga0170823_15648264	Not Available	528	Open in IMG/M
3300031231\|Ga0170824_126320675	Not Available	1348	Open in IMG/M
3300031474\|Ga0170818_104786896	Not Available	880	Open in IMG/M
3300031543\|Ga0318516_10675311	Not Available	587	Open in IMG/M
3300031545\|Ga0318541_10001501	All Organisms → cellular organisms → Bacteria	8724	Open in IMG/M
3300031572\|Ga0318515_10618173	Not Available	575	Open in IMG/M
3300031573\|Ga0310915_10872080	Not Available	631	Open in IMG/M
3300031573\|Ga0310915_11007131	Not Available	581	Open in IMG/M
3300031679\|Ga0318561_10459003	Not Available	701	Open in IMG/M
3300031681\|Ga0318572_10184371	Not Available	1215	Open in IMG/M
3300031681\|Ga0318572_10644978	Not Available	631	Open in IMG/M
3300031682\|Ga0318560_10531099	Not Available	637	Open in IMG/M
3300031713\|Ga0318496_10348792	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	818	Open in IMG/M
3300031719\|Ga0306917_10024683	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3770	Open in IMG/M
3300031719\|Ga0306917_10028871	All Organisms → cellular organisms → Bacteria → Proteobacteria	3535	Open in IMG/M
3300031719\|Ga0306917_10111712	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1977	Open in IMG/M
3300031719\|Ga0306917_10402895	Not Available	1068	Open in IMG/M
3300031744\|Ga0306918_10086246	Not Available	2198	Open in IMG/M
3300031744\|Ga0306918_10279932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	1280	Open in IMG/M
3300031744\|Ga0306918_10375861	Not Available	1105	Open in IMG/M
3300031771\|Ga0318546_10212864	Not Available	1323	Open in IMG/M
3300031777\|Ga0318543_10062365	Not Available	1545	Open in IMG/M
3300031793\|Ga0318548_10400205	Not Available	673	Open in IMG/M
3300031797\|Ga0318550_10600229	Not Available	529	Open in IMG/M
3300031819\|Ga0318568_10431810	Not Available	821	Open in IMG/M
3300031833\|Ga0310917_10437864	Not Available	889	Open in IMG/M
3300031879\|Ga0306919_10078662	Not Available	2268	Open in IMG/M
3300031897\|Ga0318520_10676721	Not Available	644	Open in IMG/M
3300031910\|Ga0306923_10644254	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1185	Open in IMG/M
3300031910\|Ga0306923_12173934	Not Available	557	Open in IMG/M
3300031910\|Ga0306923_12320600	Not Available	534	Open in IMG/M
3300031912\|Ga0306921_10059787	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4347	Open in IMG/M
3300031912\|Ga0306921_10073712	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	3921	Open in IMG/M
3300031912\|Ga0306921_10288597	Not Available	1921	Open in IMG/M
3300031912\|Ga0306921_11215690	Not Available	838	Open in IMG/M
3300031941\|Ga0310912_11062533	All Organisms → cellular organisms → Bacteria → Proteobacteria	619	Open in IMG/M
3300031942\|Ga0310916_10979525	Not Available	706	Open in IMG/M
3300031942\|Ga0310916_11233199	Not Available	617	Open in IMG/M
3300031942\|Ga0310916_11304757	Not Available	597	Open in IMG/M
3300031945\|Ga0310913_10232148	Not Available	1294	Open in IMG/M
3300031945\|Ga0310913_10586206	Not Available	791	Open in IMG/M
3300031945\|Ga0310913_10667243	Not Available	736	Open in IMG/M
3300031945\|Ga0310913_11204507	Not Available	527	Open in IMG/M
3300031954\|Ga0306926_10608068	Not Available	1334	Open in IMG/M
3300031954\|Ga0306926_12512961	Not Available	564	Open in IMG/M
3300032001\|Ga0306922_10920557	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	907	Open in IMG/M
3300032001\|Ga0306922_11532690	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	665	Open in IMG/M
3300032001\|Ga0306922_11918475	Not Available	579	Open in IMG/M
3300032035\|Ga0310911_10019815	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Stenotrophomonas → Stenotrophomonas maltophilia group → Stenotrophomonas maltophilia	3221	Open in IMG/M
3300032035\|Ga0310911_10381963	Not Available	814	Open in IMG/M
3300032035\|Ga0310911_10418013	All Organisms → cellular organisms → Bacteria → Proteobacteria	776	Open in IMG/M
3300032035\|Ga0310911_10563047	Not Available	661	Open in IMG/M
3300032041\|Ga0318549_10346337	Not Available	669	Open in IMG/M
3300032052\|Ga0318506_10180655	Not Available	929	Open in IMG/M
3300032059\|Ga0318533_10298808	Not Available	1168	Open in IMG/M
3300032066\|Ga0318514_10704992	Not Available	537	Open in IMG/M
3300032076\|Ga0306924_10184076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2397	Open in IMG/M
3300032261\|Ga0306920_100491372	Not Available	1822	Open in IMG/M
3300032261\|Ga0306920_101308595	Not Available	1042	Open in IMG/M
3300033289\|Ga0310914_10398222	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1246	Open in IMG/M
3300033289\|Ga0310914_11671707	Not Available	540	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.27%
Aquatic	Environmental → Aquatic	3.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.27%
Sediment	Environmental → Aquatic → Sediment	3.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	78.36%
Loam	Environmental → Terrestrial → Soil → Loam	17.16%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.73%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.75%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	63.43%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	16.42%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.73%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	32.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	26.12%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	16.42%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	14.93%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.48%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.73%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.75%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000816	Forest soil microbial communities from Amazon forest - 2010 replicate II A10	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027063	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 37 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A01DRAFT_10399901	3300000580	Forest Soil	MKTFLIIFWIHQAIFGLSSLGAVLNLLLEGGTTNQSNLVPLLLGMIAGSLTWGFGFVMAERLRSGASQA*
AF_2010_repII_A10DRAFT_10085553	3300000816	Forest Soil	MKTFLIIFWIHQAIFGLSSLGAVLNLLLEGGTTNQSNLVPLLLGMIAGSLTWGFGFVMAERLR*
AF_2010_repII_A10DRAFT_10328981	3300000816	Forest Soil	MKTFLIIFWIHQAIFGLSSLGSVLNLLLEGGTTNQSNLVPLLLAMIAGSLTWGFGFVMAERLRSWASQADSIAV
Ga0066395_100261235	3300004633	Tropical Forest Soil	FWIHQAIFGLSSLGAVLNLLLEGGTTGQSNLVPLLLAMIAGSLTWGFGFVMTERLRSWASQA*
Ga0066395_101208812	3300004633	Tropical Forest Soil	MKTFLIIFWIHQAIFGLSSLGAVLNLLLEGGATNQSNLVPLLLAMIAGSLTWGFGFVMAERLRSWASQA*
Ga0066388_1000430593	3300005332	Tropical Forest Soil	MKAFLIIFWIHQVIFGLSSLGAVLNLLLEGGTTGQLNLVPLLLAWIAGSLIWGFGFVMAERLRSSAKIQVTNGASQA*
Ga0066388_1005434902	3300005332	Tropical Forest Soil	MKMFLIVFWIHQAIFGLSSLGAVLNLLLEGGTTGQSNLVPLLLAMIAGSLTWGFGFVMTERLRSWATQA*
Ga0066388_1005513842	3300005332	Tropical Forest Soil	MKTFLIIFWIHQLIFGLSSLGSVLNLLLMGGTTNQSNLVSLLLAMIAGSLTWGFGFVMAERLRSWASQA*
Ga0066388_1005813902	3300005332	Tropical Forest Soil	MKTFLIIFWIHQIIFGLSSLGSVLNLLLEGGTTNQSNLVPLLLAMTAGSLTWGFGFVMAERLRSWASQA*
Ga0066388_1050643161	3300005332	Tropical Forest Soil	MKTFLIIFWVHQAIFGLSSVGAVLNLLLEGGTTNQSNLVPLLLAMIAGSLTWGFGFVMAE
Ga0066388_1057640891	3300005332	Tropical Forest Soil	MKTFLIIFWIHQAIFGLSSLGAVLNLLLEGGATNQSNLVPLLLAMIAGSLTWGFGFVMTERLRSWASQA*
Ga0066388_1082034862	3300005332	Tropical Forest Soil	IKEEEMKTFLIIFWIHQAIFGLSSVGAVLNLLLEGGTTNRSNLVPLLLAMIAGSLTWGFGFVMAEQLRSWTS*
Ga0066903_1014558182	3300005764	Tropical Forest Soil	MKMFLIVSWIRQAIFGLSSLGAVLNLLLEGGTTGQSNLVPLLLAMIAGSLTWGFGFVMTERLRSWATQA*
Ga0066903_1031219712	3300005764	Tropical Forest Soil	MKTFLIIFWIHQAIFGLSSLGAVLNLLLMGGTTNQSNLVPLLLAMIAGSLTWGFGFVMTE
Ga0066903_1044005302	3300005764	Tropical Forest Soil	TFLIIFWIHQAIFGLSSVGAVLNLLLEGGTTNQSNLVPLLLAMIAGSLTWGFGFVMAERLRSWASQA*
Ga0066903_1049463911	3300005764	Tropical Forest Soil	MKTFLIIFWIHQAIFGLSSLGAVLNLLLEGGTPNQSSLVPLLLAMIAGSLTWGFGFVMAERLRSSD*
Ga0066903_1052993891	3300005764	Tropical Forest Soil	MKTLLINFTIHQIIFGLSSLGSVLNLLLEGGTTNQSNLVPLLLAMIAGSLTWGFGFVMAERLRS
Ga0066903_1063046351	3300005764	Tropical Forest Soil	MKTFLIIFWIHQIIFGLSSLGSVLNLLLEVGTTNQSNLVPLLLAMTAGSLTWGFGFVMAERLRSWASQA
Ga0066903_1072555052	3300005764	Tropical Forest Soil	IHQAIFGLSSLGAVLNLLLEGGTTGQSNLVPLLLAMIAGSLTWGFGFVMAERLRSSD*
Ga0066903_1088635492	3300005764	Tropical Forest Soil	MKTFLIIFWIHQVIFGLSSLGAVLNLLLEGGTTNQSNLVPLLMAMIAGSLTWGFGFVMTERLRSGASQA*
Ga0075024_1003162242	3300006047	Watersheds	MKAFLIIFWIHQVIFGLSSLGAVLNLLLEGGTTGQSNLVPLLLAWIAGSLTWGFGFVMAERLRSSAKIQVTNGASQV*
Ga0075029_1003570462	3300006052	Watersheds	MKAFLIIFWIHQVIFGLSSLGAVLNLLLEGGTTGQLNLVPLLLAWIAGSLTWGFGFVMAERLRSSAKIQVTNGASQA*
Ga0075018_102775682	3300006172	Watersheds	MKAFLIIFWIHQVIFGLSSLGAVLNLLLERGTTGQLNLVPLLLAWIAGSLTWGFGFVMAERLRSSAKIQVTNGASQA*
Ga0075014_1007842122	3300006174	Watersheds	MKAFLIIFWIHQVIFGLSSLGAVLNLLLEGGTTGQSNLVPLLLAWIAGSLTWGFGFVMAERLRSSAKIQVTNGASQ
Ga0126374_104104431	3300009792	Tropical Forest Soil	MKTFLIIFWIHQAIFGLSSLGAVLNLLLEGGTTNQSNLVPLLLAMIAGSLTWGFGFVMAERLRSSDKIQVTNGASQA*
Ga0126380_112265692	3300010043	Tropical Forest Soil	MKTFLIIFWIHQAIFGLSSLGSVLNLLLEGGTTNQSNLVPLLLAMIAGSLTWGFGFVMAERLRSWASQA*
Ga0126382_113366732	3300010047	Tropical Forest Soil	MKTFLIVFWIHQAIFGLSSLGAVLNLLLEGGATNQSNLVPLLLAMIAGSLTWGFGFVMTERLRSWANQA*
Ga0126373_103336351	3300010048	Tropical Forest Soil	MKTFLIIFWIHQAIFGLSSLGAVLNLLLEGGTTNQSSLVPLLLAMIAGSLTWGFGFVMAERLRSSDKIQVTNGASQA*
Ga0126373_114803502	3300010048	Tropical Forest Soil	MKTFLIIFWIHQAIFGLSSVGAVLNLLLEGGTTNQSNLVPLLLAMIAGSLTWGFGFVMAERLRSWASQA*
Ga0126373_121552712	3300010048	Tropical Forest Soil	MKTLLIVFWIHQAIFGLSSLGAVLNLEGGTTGQSNLVPLLLAMIGGSLTWGFGFVMAEGLRSSDWIQATNGASQA*
Ga0126373_124019711	3300010048	Tropical Forest Soil	MKTLLIVFWIHQAIFGLSSLGAVLNLLLEGGTTGQSNLVPLLLAMIAGSLTWGFGFVMAERLRSWASQA*
Ga0126370_102977013	3300010358	Tropical Forest Soil	MKTFLIIFWIHQAIFGLSSLGAVLNLLLEGGATNQSNLIPLLLAMIAGSLTWGF
Ga0126370_122225971	3300010358	Tropical Forest Soil	MKTLLIVFWIHQAIFGLSSLGAVLNLLLEGGTTNQSSLVPLLLAMIAGSLTWGFGFVMAERLRSSD*
Ga0126376_108744054	3300010359	Tropical Forest Soil	MKTFLIIFWIHQAIFGLSSLGSVLNLLLEGGTTNQSNLVPLLLGMIAGSLTWGFGFVMAERLR*
Ga0126376_115457601	3300010359	Tropical Forest Soil	MKTFLIIFWIHQAIFGLSSLGAVLNLLLEGGTTNQSSLVPLLLAMIAGSLTWGFGFVMAEQLRSWTS*
Ga0126378_100710691	3300010361	Tropical Forest Soil	MKTFLIIFWIHQAIFGLSSLGAVLNLLLEGGTTGQSNLVPLLLAMIAGSLTWGFGFVMAERLRSWASQA*
Ga0126378_101991041	3300010361	Tropical Forest Soil	MKTFLIIFWIHQAIFGLSSVGAVLNLLLEGGTTNQSNLVPLLLAMIAGSLTWGFGFVMAERL
Ga0126378_102258791	3300010361	Tropical Forest Soil	KEEEMKTFLIIFWIHQAIFGLSSLGAVLNLLLEGGATNQSNLVPLLLAMIAGSLTWGFGFVMAERLRSWASQA*
Ga0126379_113226681	3300010366	Tropical Forest Soil	MKTFLIIFWIHQAIFGLSSLGAVLNLLLEGGTTNQSSLVPLLLAMIAGSLTWGFGFVMAERLRSSD*
Ga0126379_138924811	3300010366	Tropical Forest Soil	MKTLLIVFWIHQAIFGLSSLGAVLNLLLEGGTTGQSNLVPLLLAMIAGSLTWGFGFVMAERLGPWASRA*
Ga0126383_134638421	3300010398	Tropical Forest Soil	MKTFLIIFWIHQAIFGLSSLGAVLNLLLEGGATNQSNLVPLLLAMIAGSLTWGFGFVMTERLRSWA
Ga0124850_10130964	3300010863	Tropical Forest Soil	MKTFLIIFWIHQAIFGLSSLGAVLNLLLEGGTTNQSNLVPLLLGMIAGSLTWGFGFVMAERLRSSD*
Ga0124844_11322081	3300010868	Tropical Forest Soil	MKTFLIIFWIHQAIFGLSSLGAVLNLLLEGGTTNQSNLVPLLLGMIAGSLTWGFGFVMAERLRPGASQA*
Ga0182036_108026522	3300016270	Soil	MKTLLIIFTIHQIIFGLSSLGSVLNLLLEGGTTNQSNLVPLLLAMAAGSLTWGFGFVMAERLRSWASQA
Ga0182036_112553252	3300016270	Soil	MKTFLIIFWVHQAIFGFSSLGAVLNLLLEGGATNQSNLVPLLLAMIAGSLTWGFGFVM
Ga0182041_100887905	3300016294	Soil	MKTFLIIFWIYQAIFGLSSLGAVLNLLLEGGTTNQSSLVPLLLAMIAGSLTWGFGFVMAERLRSSAKIQVTNGPSQA
Ga0182041_116427562	3300016294	Soil	MIGAGNGKAIESREEEMKTFLIIFWIHQAIFGLSSVGAVLNLLLEGGTTNQSNLVPLLLAMIAGSLTWGFGFVMAERLRSWASQA
Ga0182033_100815414	3300016319	Soil	MKTFLIIFWIYQAIFGLSSLGAVLNLLLEGGTTNQSSLVPLLLAMIAGSLTWGFGFVMAERLRSSAKIQVTNGASQA
Ga0182033_101237931	3300016319	Soil	MKTFLIIFWIHQAIFGLSSLGAVLNLLLEGGTTNQSNLVPLLLAMIAGSLTWGFGFV
Ga0182033_104064422	3300016319	Soil	MDRLPTYRLDRGIIFWIHQAIFGFSSLGAGLNLLLEGGTTNQSNLVPLLLGMIAGSLTWGFGFVMAERLRSWASQA
Ga0182033_114418591	3300016319	Soil	MIGAGNGKAIESREEEMKTFLIIFWIHQAIFGLSSVGAVLNLLLEGGTTNQSNLVPLLLAMIAGSLTWGFGF
Ga0182035_110268473	3300016341	Soil	MIGAGNGKAIESREEEMKTFLIIFWIHQAIFGLSSVGAVLNLLLEGGTTNQSNLVPLLLAMIAGSLTWGFGFVMAE
Ga0182032_102388303	3300016357	Soil	MKTFLIIFWIHQLIFGLSSLGSVLNLLLEGGTTNQSHLVPLLLAMIAGSLTWGFGFVMAERLRSWAS
Ga0182032_104731521	3300016357	Soil	MKTFLIIFWIHQIIFGLSSLGSVLNLLLEGGTTNQSNLVPLLLAMIAGSLTWGFGFV
Ga0182034_102149723	3300016371	Soil	WIHQIIFGLSSLGSVLNLLLEGGTTNQSNLVPLLLAMAAGSLTWGFGFVMAERLRSWASQ
Ga0182034_102761263	3300016371	Soil	MKTFLIIFWIHQAIFGLSSLIAVLNLLLEGGATNQSNLVPLLLAMIAGSLTWGSVFSWQNGCGRGR
Ga0182034_110205042	3300016371	Soil	MKTFLIIFWIHQAIFGLSSLGAVLNLLLEGGTTNQSNVVPLLLGMIAGSLTWGFGFVMAERLRSWASQA
Ga0182040_101106591	3300016387	Soil	MKTFLIIFWIHQAIFGLSSLGAVLNLLLMGGTTNQSNLVPLLLAMIAGSLTWGFGFVMAERLR
Ga0182040_106079801	3300016387	Soil	MKTFLIIFWIHQLIFGLSSLGSVLNLLLEGGTTNQSNLVPLLLAMIAGSLTWGFGFVMAERL
Ga0182039_107697631	3300016422	Soil	IIFWIHQAIFGLSSLGSVLNLLLEGGTTNQSNLVPLLLAMIAGSLTWGFGFVMTERLRSW
Ga0182039_115342261	3300016422	Soil	MKPFLIIFWIHQTIFGLSSPGAVLNLVLEGGTTNQSNLVPLLLAMIAGSLTWGFGFVMAE
Ga0182038_101938944	3300016445	Soil	MKTFLIIFWIHQIIFGLSSLGSVLNLLLEGGTTNQSNLVPLLLAMIAGSLTWGFGFVM
Ga0182038_102240111	3300016445	Soil	MKTFLIIFWIHQLIFGLSSLGSVLNLLLEGGTTNQSNLVPLLLAMIAGSLTWGFGF
Ga0182038_111646283	3300016445	Soil	MKTFLIIFWIHQAIFGFSSLGAVLNLLLEGGTTNQSNLVPLLLAMIAGSLTWGFGFVMAERLRS
Ga0187779_101269661	3300017959	Tropical Peatland	MKTFLIIFWIHQAIFGLSSLGAVLNLLLEGGATNQSNLVPLLLAMIAGSLTWGFGFVMAERLRSWASQT
Ga0126371_100374497	3300021560	Tropical Forest Soil	MKTFLIIFWIHQAIFGLSSLGAVLNLLLEGGATNQSNLVPLLLAMIAGSLTWGFGFVMAERLRSWASQA
Ga0126371_104413581	3300021560	Tropical Forest Soil	MKTLLIVFWIHQAIFGLSSLGAVLNLLLEGGTTGQSNLVPLLLAMIAGSLTWGFGFVMAERLRSWASQA
Ga0126371_114123301	3300021560	Tropical Forest Soil	MKTFLIIFWIHQAIFGLSSLGAVLNLLLEGGTTNQSSLVPLLLAMIAGSLTWGFGFVM
Ga0207692_102134192	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	EMKAFLIIFWIHQVIFGLSSLGAVLNLLLEGGTTGQLNLVPLLLAWIAGSLTWGFGFVMAERLRSSAKIQVTNGATQA
Ga0207762_10497131	3300027063	Tropical Forest Soil	MKTFLIIFWIHQAIFGLSSLGAVINLLLEGGTTNQSNLVPLLLAMIAGSLTWGFGFVMAERLRSSPSAMTSS
Ga0209465_100374681	3300027874	Tropical Forest Soil	MKTLLIVFWIHQAIFGLSSLGAVLNLLLEGGTTGQSNLVPLLLAMIAGSLTWGFGFVMAERLRSWA
Ga0209465_105061772	3300027874	Tropical Forest Soil	MKTFLIIFWIHQAIFGLSSLGAVLNLLLEGGATNQSNLVPLLLAMIAGSLTWGFGFVMAERLRSWA
Ga0209583_105551241	3300027910	Watersheds	MKAFLIIFWIHQVIFGLSSLGAVLNLLLEGGTTGQSNLVPLLLAWIAGSLTWGFGFVMAERLRSSAKIQVTNGASQV
Ga0170823_156482642	3300031128	Forest Soil	MKAFLIIFWIHQVIFGLSSLGAVLNLLLEGGTTGQLNLVPLLLAWIAGSLTWGFGFAMAERLRSSAKIQVTNGASQA
Ga0170824_1263206754	3300031231	Forest Soil	KAFLIIFWIHQVIFGLSSLGAVLNLLLEGGTTGQLNLVPLLLSWIAGSLTWGFGFVMAERLRSSAKIQVTNGASQA
Ga0170818_1047868962	3300031474	Forest Soil	MKAFLIIFWIHQVIFGLSSLGAVLNLLLEGGTTGQLNLVPLLLAWIAGSLTWGFGFVMAERLWSRASQA
Ga0318516_106753112	3300031543	Soil	MKTFLIIFWIHQAIFGLSSLGAVLNLLLEGGTTNQSNLVPLLLAMIAGSLTWGFGFVMAERLRSWASQA
Ga0318541_100015018	3300031545	Soil	MKAFLIIFWIHQVIFGLSSLGAVLNLLLEGGTTGQLNLVPLLLAWIAGSLIWGFGFVMAERLRSSAKIQVTNGASQA
Ga0318515_106181732	3300031572	Soil	FKEEEMKAFLIIFWIHQVIFGLSSLGAVLNLLLEGGTTGQLNLVPLLLAWIAGSLIWGFGFVMAERLRSSAKIQVTNGASQA
Ga0310915_108720802	3300031573	Soil	MKTFLIIFWIHQAIFGLSSVGAVLNLLLEGGTTNQSNLVPLLLAMIAGSLTWGFGFVMAERLRSWASQA
Ga0310915_110071311	3300031573	Soil	EHLNGIIFWIDQAIFGLSSLGGVLNLLLEGGTTNQSSLVPLLLAMIAGSLTWGFGFVMAERLRSSAKIQVTNRASQA
Ga0318561_104590032	3300031679	Soil	MKTFLIIFWIHQIIFGLSSLGSVLNLLLEGGTTNQSNLVPLLLAMIAGSLTWGFGFVMAERLRSWASQA
Ga0318572_101843713	3300031681	Soil	IHQVIFGLSSLGAVLNLLLEGGTTGQLNLVPLLLAWIAGSLIWGFGFVMAERLRSSAKIQVTNGASQA
Ga0318572_106449781	3300031681	Soil	FWIHQAIFGLSSLGSVLNLLLEGGTTNQSNLVPLLLAMIAGSLTWGFGFVMAERLQSWASQA
Ga0318560_105310993	3300031682	Soil	LIIFWIHQVIFGLSSLGAVLNLLLEGGTTGQLNLVPLLLAWIAGSLIWGFGFVMAERLRSSAKIQVTNGASQA
Ga0318496_103487921	3300031713	Soil	IKEEEMKTFLIIFWIHQLIFGLSSLGSVLNLLLEGGTTNQSNLVPLLLAMIAGSLTWGFGFVMAERLRSWASQA
Ga0306917_100246838	3300031719	Soil	QAIFGLSSLGAVLNLLLEGGTTNQSNLVPLLLAMIAGSLTWGFGFVMAERLRSWASQA
Ga0306917_100288712	3300031719	Soil	MKTFLVIFWIHQIIFGLSSLGSVLNLLLEGGTTNQSNLVPLLLAMAAGSLTWGFGFVMAERLRSWASQA
Ga0306917_101117123	3300031719	Soil	MKTFLIIFWIHQLIFGLSSLGSVLNLLLEGGTTNQSNLVPLLLAMIAGSLTWGFGFVMAERLRSWASQA
Ga0306917_104028951	3300031719	Soil	MKTFLIIFWIHQAIFGFSSLGAVLNLLLMGGTTNQSNLVPLLLAMIAGSLTWGFGFVMAERLRSSD
Ga0306918_100862464	3300031744	Soil	MKTFLIIFWIYQAIFGLSSLGAVLNLLLEGGTTNQSSLVPLLLAMIAGSLTWGFGFVMAERLRSSAKIQVTNRASQA
Ga0306918_102799322	3300031744	Soil	MIGAGNGKAIESREEEMKTFLIIFWIHQAIFGLSSVGAVLNLLLEGGTTNQSNLVPLLLAMIAGSLTWGFGFVMAERLRSSQA
Ga0306918_103758612	3300031744	Soil	MKTLLIIFTIHQIIFGLSSLGSVLNLLLEGGTTNQSNLVPLLLAMIAGSLTWGFGFVMAERLRSWASQA
Ga0318546_102128641	3300031771	Soil	MKTFLIIFWIHQAIFGLSSLGAVLNLLLEGGTTNQSNLVPLLLAMIAGSLTWGFGFVMAERLRS
Ga0318543_100623652	3300031777	Soil	MKTFLIIFWIHQAIFGLSSVGAVLNLLLEGGTTNQSNLVPLLLAMIAGSLTWGFGFVMAERLRSSAKIQVTNRASQA
Ga0318548_104002051	3300031793	Soil	MKTFLIIFWIHQAIFGLSSVGAVLNLLLEGGTTNQSNLVPLLLAMIAGSLTWGFGFVMAERLRSSQA
Ga0318550_106002292	3300031797	Soil	MKTFLIIFWIHQAIFGLSSLGAVLNLLLMGGTTNQSNLVPLLLAMIAGSLTWGF
Ga0318568_104318103	3300031819	Soil	KEEEMKAFLIIFWIHQVIFGLSSLGAVLNLLLEGGTTGQLNLVPLLLAWIAGSLIWGFGFVMAERLRSSAKIQVTNGASQA
Ga0310917_104378642	3300031833	Soil	MKTFLVIFWIHQIIFGLSSLGSVLNLLLEGGTTNQSNLVPLLLAMAAGSLTWGFGFVM
Ga0306919_100786624	3300031879	Soil	MKTFLIIFWIHQAIFGLSSLGAVLNLLLEGGATNQSNLVPLLLAMIAGSLTWGFGFVMAERL
Ga0318520_106767212	3300031897	Soil	MKTFLIIFWIHQAIFGFSSLGAVLNLLLEGGTTNQSNLVPLLLGMIAGSLTWGFGFVMAERLRSWASQA
Ga0306923_106442541	3300031910	Soil	MIGAGNGKAIESREEEMKTFLIIFWIHQAIFGLSSVGAVLNLLLEGGTTNQSNLVPLLLAMIAGSLTWGFGFV
Ga0306923_121739342	3300031910	Soil	MKTFLIIFWIHQAIFGFSSLGAVLNLLLEGGTTNQSNLVPLLLGMIAGSLTWGFGFVMAERLR
Ga0306923_123206002	3300031910	Soil	MKTFLVIFWIHQIIFGLSSLGSVLNLLLEGGTTNQSNLVPLLLAMTAGSLTWGFGFVMAERLRSWASQA
Ga0306921_100597872	3300031912	Soil	MKTFLIIFWIHQAIFGLSSLGAVLNLLLEGGATNQSNLVPLLLAMIAGSLTWGFGFVMAERLQSWASQA
Ga0306921_100737124	3300031912	Soil	MKTFLIIFWIHQAIFGLSSLGAVLNLLLMGGTTNQSNLVPLLLAMIAGSLTWGFGFVMAERLRSSD
Ga0306921_102885972	3300031912	Soil	MKTLLIIFTIHQIIFGLSSLGTVLNLLLEGGTTNQSNLVPLLLAMIAGSLTWGFGFVMAERLRSWASQA
Ga0306921_112156902	3300031912	Soil	LVIFWIHQIIFGLSSLGSVLNLLLEGGTTNQSNLVPLLLAMAAGSLTWGFGFVMAERLRSWASQA
Ga0310912_110625331	3300031941	Soil	KKMKTFLIIFWIHQAIFGLSSLGAVLNLLLEGGATNQSNLVPLLLAMIAGSLTWGFGFVMAERLRSWASQA
Ga0310916_109795251	3300031942	Soil	REEEMKTFLIIFWIHQAIFGLSSVGAVLNLLLEGGTTNQSNLVPLLLAMIAGSLTWGFGFVMAERLRSSQA
Ga0310916_112331992	3300031942	Soil	MKTFLIIFWVHQAIFGFSSLGAVLNLLLEGGATNQSNLVPLLLAMIAGSLTWGFGFVMAERLQSWASQA
Ga0310916_113047573	3300031942	Soil	MKTFLIIFWIHQLIFGLSSLGSVLNLLLMGGTTNQSNLVSLLLAMIAGSLTWGFGFVMAERLRSWAGQA
Ga0310913_102321484	3300031945	Soil	HQLIFGLSSLGSVLNLLLEGGTTNQSNLVPLLLAMIAGSLTWGFGFVMAERLRSWASQA
Ga0310913_105862062	3300031945	Soil	TARKEEEMKTLVIIFTIHQIIFGLSSLGTVLNLLLEGGTTNQSNLVPLLLAMIAGSLTWGFGFVMAERLRSWASQA
Ga0310913_106672431	3300031945	Soil	MKTFLIIFWIHQAIFGLSSLGSVLNLLLEGGTTNQSNLVPLLLAMIAGSLTWGFGFVMTERLRSWA
Ga0310913_112045071	3300031945	Soil	KTFLIIFWIHQAIFGLSSLGAVLNLLLEGGATNQSNLVPLLLAMIAGSLTWGFGFVMAERLRSWASQA
Ga0306926_106080682	3300031954	Soil	IIFGLSSLGSVLNLLLEGGTTNQSNLVPLLLAMAAGSLTWGFGFVMAERLRSWASQA
Ga0306926_125129612	3300031954	Soil	KEEEMKTFLIIFWIHQAIFGLSSLGSVLNLLLEGGTTNQSNLVPLLLAMIAGSLTWGFGFVMTERLRSWA
Ga0306922_109205571	3300032001	Soil	MKTFLIIFWIHQAIFGLSSLGAVLNLLLEGGTTNQSNLVPLLLAMIAGSLTWGFGFVMAERLR
Ga0306922_115326902	3300032001	Soil	MIGAGNGKAIESREEEMKTFLIIFWIHQAIFGLSSVGAVLNLLLEGGTTNQSNLVPLLLAMIAGSLTWGFGFVMAER
Ga0306922_119184751	3300032001	Soil	MKTLLIIFTIHQIIFGLSSLGSVLNLLLEGGTTNQSNLVPLLLAMIAGSLTWGFGFVMAERLRSW
Ga0310911_100198157	3300032035	Soil	MKTFLIIFWIHQAIFGLSSLGAVLNLLLEGGTTNQSNLVPLLLAMIAGSLTWGFGFVMAE
Ga0310911_103819632	3300032035	Soil	NGKAIEPREEEMKTFLIIFWIHQAIFGLSSVGAVLNLLLEGGTTNQSNLVPLLLAMIAGSLTWGFGFVMAERLRSWASQA
Ga0310911_104180131	3300032035	Soil	IIFWIHQIIFGLSSLGSVLNLLLEGGTTNQSNLVPLLLAMIAGSLTWGFGFVMAERLRSWASQA
Ga0310911_105630471	3300032035	Soil	IHQIIFGLSSLGSVLNLLLEGGTTNQSNLVPLLLAMAAGSLTWGFGFVMAERLRSWASQA
Ga0318549_103463371	3300032041	Soil	RLFKEEEMKAFLIIFWIHQVIFGLSSLGAVLNLLLEGGTTGQLNLVPLLLAWIAGSLIWGFGFVMAERLRSSAKIQVTNGASQA
Ga0318506_101806551	3300032052	Soil	MKTFLIIFWIHQLIFGLSSLGSVLNLLLEGGTTNQSNLVPLLLAMIAGSLTWGFGFVMAERLRSSAKIQVTNGASQA
Ga0318533_102988081	3300032059	Soil	MKTFLIIFWIHQIIFGLSSLGSVLNLLLEGGTTNQSNLVPLLLAMIAGSLTWGFGFVIAERLRSWASQA
Ga0318514_107049922	3300032066	Soil	MKAFLIIFWIHQVIFGLSSLGAVLNLLLEGGTTGQLNLVPLLLAWIAGSLIWGFGFVMAE
Ga0306924_101840761	3300032076	Soil	MKTFLIIFWIHQAIFGLSSVGAVLNLLLEGGTTNQSNLVPLLLAMIAGSLTWGFGFVMAE
Ga0306920_1004913721	3300032261	Soil	FLVIFWIHQIIFGLSSLGSVLNLLLEGGTTNQSNLVPLLLAMTAGSLTWGFGFVMAERLRSWASQA
Ga0306920_1013085952	3300032261	Soil	FLVIFWIHQIIFGLSSLGSVLNLLLEGGTTNQSNLVPLLLAMAAGSLTWGFGFVMAERLRSWASQA
Ga0310914_103982221	3300033289	Soil	EMKTFLIIFWIHQAIFGLSSLGAVLNLLLEGGTTNQSNLVPLLLAMIAGSLTWGFGFVMAERLRSWASQA
Ga0310914_116717071	3300033289	Soil	TFLIIFWIHQAIFGLSSLGSVLNLLLEGGTTNQSNLVPLLLAMIAGSLTWGFGFVMTERLRSWA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F059305

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences