Metagenome Family F059314

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F059314
Family Type	Metagenome
Number of Sequences	134
Average Sequence Length	70 residues
Representative Sequence	MADDSDHYKDVNVVISLLEAVYCRDGADVAVQTAKHMIAAAAALLTCEQGPDETRRILRIVGEAQGKAS
Number of Associated Samples	98
Number of Associated Scaffolds	134

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	9.92 %
% of genes near scaffold ends (potentially truncated)	31.34 %
% of genes from short scaffolds (< 2000 bps)	82.09 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.65

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (67.164 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil (17.910 % of family members)
Environment Ontology (ENVO)	Unclassified (40.299 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.731 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 62.89% β-sheet: 0.00% Coil/Unstructured: 37.11%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.65
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.65
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 134 Family Scaffolds
PF06078	DUF937	37.31
PF04392	ABC_sub_bind	3.73
PF11953	DUF3470	3.73
PF04228	Zn_peptidase	2.99
PF01734	Patatin	1.49
PF00211	Guanylate_cyc	1.49
PF09361	Phasin_2	1.49
PF03401	TctC	0.75
PF13561	adh_short_C2	0.75
PF07784	DUF1622	0.75
PF04226	Transgly_assoc	0.75
PF05661	DUF808	0.75
PF09335	SNARE_assoc	0.75
PF00005	ABC_tran	0.75
PF13414	TPR_11	0.75
PF02518	HATPase_c	0.75
PF08241	Methyltransf_11	0.75
PF13531	SBP_bac_11	0.75
PF07813	LTXXQ	0.75
PF07311	Dodecin	0.75
PF13442	Cytochrome_CBB3	0.75
PF02653	BPD_transp_2	0.75
PF00300	His_Phos_1	0.75
PF05118	Asp_Arg_Hydrox	0.75

COG ID	Name	Functional Category	% Frequency in 134 Family Scaffolds
COG3753	Uncharacterized conserved protein YidB, DUF937 family	Function unknown [S]	37.31
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	3.73
COG2321	Predicted metalloprotease	General function prediction only [R]	2.99
COG3678	Periplasmic chaperone Spy, Spy/CpxP family	Posttranslational modification, protein turnover, chaperones [O]	2.99
COG1752	Predicted acylesterase/phospholipase RssA, containd patatin domain	General function prediction only [R]	1.49
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	1.49
COG3621	Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotR	General function prediction only [R]	1.49
COG4667	Predicted phospholipase, patatin/cPLA2 family	Lipid transport and metabolism [I]	1.49
COG0398	Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 family	Function unknown [S]	0.75
COG0586	Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family	Cell wall/membrane/envelope biogenesis [M]	0.75
COG1238	Uncharacterized membrane protein YqaA, VTT domain	Function unknown [S]	0.75
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	0.75
COG2354	Membrane protein MutK/YedI, may be involved in DNA repair	Replication, recombination and repair [L]	0.75
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.75
COG3360	Flavin-binding protein dodecin	General function prediction only [R]	0.75
COG3555	Aspartyl/asparaginyl beta-hydroxylase, cupin superfamily	Posttranslational modification, protein turnover, chaperones [O]	0.75
COG4828	Uncharacterized membrane protein	Function unknown [S]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	67.16 %
Unclassified	root	N/A	32.84 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	67.16 %
Unclassified	root	N/A	32.84 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	67.16 %
Unclassified	root	N/A	32.84 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	62.69 %
Unclassified	root	N/A	32.84 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	44.03 %
Unclassified	root	N/A	32.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.84 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	23.88 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	4.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.84 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	10.45 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.48 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	2.24 %
Hyphomicrobiales incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis	0.75 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.84 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4.48 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.48 %
Pseudolabrys	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys	2.24 %
Nitrobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter	1.49 %
Pseudorhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes	0.75 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.84 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.48 %
unclassified Nitrobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → unclassified Nitrobacter	1.49 %
Pseudolabrys taiwanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	1.49 %
unclassified Pseudolabrys	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys	0.75 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.75 %
unclassified Microvirga	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → unclassified Microvirga	0.75 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.75 %
Pseudorhodoplanes sinuspersici	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.84 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.48 %
Nitrobacter sp. Nb-311A	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → unclassified Nitrobacter → Nitrobacter sp. Nb-311A	1.49 %
Pseudolabrys taiwanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	1.49 %
Pseudolabrys sp. Root1462	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	0.75 %
Bradyrhizobium sp. URHD0069	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	0.75 %
Microvirga sp. HBU67692	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → unclassified Microvirga → Microvirga sp. HBU67692	0.75 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.75 %
Pseudorhodoplanes sinuspersici	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090015\|GPICI_9247383	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1108	Open in IMG/M
2209111006\|2214636057	Not Available	517	Open in IMG/M
2228664021\|ICCgaii200_c0875586	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1554	Open in IMG/M
3300000156\|NODE_c0734850	All Organisms → cellular organisms → Bacteria	9450	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101502594	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	796	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101504188	Not Available	716	Open in IMG/M
3300000550\|F24TB_10051780	All Organisms → cellular organisms → Bacteria	1203	Open in IMG/M
3300001867\|JGI12627J18819_10342638	Not Available	604	Open in IMG/M
3300003911\|JGI25405J52794_10074881	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	741	Open in IMG/M
3300003911\|JGI25405J52794_10085271	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	697	Open in IMG/M
3300004114\|Ga0062593_100793620	All Organisms → cellular organisms → Bacteria → Proteobacteria	940	Open in IMG/M
3300004157\|Ga0062590_101889933	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	615	Open in IMG/M
3300004268\|Ga0066398_10136516	Not Available	604	Open in IMG/M
3300004479\|Ga0062595_102180690	Not Available	542	Open in IMG/M
3300005164\|Ga0066815_10062365	Not Available	638	Open in IMG/M
3300005328\|Ga0070676_10154560	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1471	Open in IMG/M
3300005332\|Ga0066388_100006561	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	8363	Open in IMG/M
3300005332\|Ga0066388_100013536	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6612	Open in IMG/M
3300005332\|Ga0066388_100067935	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3846	Open in IMG/M
3300005332\|Ga0066388_100191328	All Organisms → cellular organisms → Bacteria → Proteobacteria	2662	Open in IMG/M
3300005332\|Ga0066388_100353371	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2116	Open in IMG/M
3300005332\|Ga0066388_100589149	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1736	Open in IMG/M
3300005332\|Ga0066388_100767642	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1561	Open in IMG/M
3300005332\|Ga0066388_101655273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1130	Open in IMG/M
3300005332\|Ga0066388_108113732	All Organisms → cellular organisms → Bacteria → Proteobacteria	525	Open in IMG/M
3300005332\|Ga0066388_108221318	Not Available	521	Open in IMG/M
3300005332\|Ga0066388_108698941	Not Available	504	Open in IMG/M
3300005343\|Ga0070687_100840180	All Organisms → cellular organisms → Bacteria → Proteobacteria	654	Open in IMG/M
3300005439\|Ga0070711_100415032	All Organisms → cellular organisms → Bacteria → Proteobacteria	1095	Open in IMG/M
3300005536\|Ga0070697_101868373	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	537	Open in IMG/M
3300005539\|Ga0068853_101164632	All Organisms → cellular organisms → Bacteria → Proteobacteria	744	Open in IMG/M
3300005713\|Ga0066905_100012215	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4163	Open in IMG/M
3300005713\|Ga0066905_100156531	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1649	Open in IMG/M
3300005713\|Ga0066905_100351293	All Organisms → cellular organisms → Bacteria	1178	Open in IMG/M
3300005713\|Ga0066905_100505774	Not Available	1005	Open in IMG/M
3300005764\|Ga0066903_102108402	All Organisms → cellular organisms → Bacteria → Proteobacteria	1085	Open in IMG/M
3300005764\|Ga0066903_105287223	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → unclassified Nitrobacter → Nitrobacter sp. Nb-311A	682	Open in IMG/M
3300005764\|Ga0066903_105652265	Not Available	658	Open in IMG/M
3300005843\|Ga0068860_100710091	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1015	Open in IMG/M
3300006049\|Ga0075417_10018844	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2720	Open in IMG/M
3300006057\|Ga0075026_100656942	Not Available	622	Open in IMG/M
3300006172\|Ga0075018_10071058	All Organisms → cellular organisms → Bacteria	1492	Open in IMG/M
3300006194\|Ga0075427_10106828	All Organisms → cellular organisms → Bacteria → Proteobacteria	525	Open in IMG/M
3300006358\|Ga0068871_100750299	All Organisms → cellular organisms → Bacteria → Proteobacteria	897	Open in IMG/M
3300006755\|Ga0079222_10114712	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1452	Open in IMG/M
3300006806\|Ga0079220_10844559	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300006854\|Ga0075425_100004793	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	14007	Open in IMG/M
3300006871\|Ga0075434_100366608	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1461	Open in IMG/M
3300006904\|Ga0075424_100007238	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	10748	Open in IMG/M
3300006914\|Ga0075436_100335847	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1087	Open in IMG/M
3300006954\|Ga0079219_12291395	Not Available	522	Open in IMG/M
3300009092\|Ga0105250_10607010	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	507	Open in IMG/M
3300009147\|Ga0114129_10961446	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1078	Open in IMG/M
3300009792\|Ga0126374_10567743	Not Available	831	Open in IMG/M
3300010043\|Ga0126380_10075493	Not Available	1931	Open in IMG/M
3300010043\|Ga0126380_10601812	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	866	Open in IMG/M
3300010043\|Ga0126380_11533542	Not Available	592	Open in IMG/M
3300010046\|Ga0126384_11677244	Not Available	600	Open in IMG/M
3300010047\|Ga0126382_10034826	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2804	Open in IMG/M
3300010047\|Ga0126382_11107942	Not Available	702	Open in IMG/M
3300010358\|Ga0126370_10328042	Not Available	1227	Open in IMG/M
3300010361\|Ga0126378_10515427	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1311	Open in IMG/M
3300010362\|Ga0126377_10178655	Not Available	2018	Open in IMG/M
3300010362\|Ga0126377_13437072	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	512	Open in IMG/M
3300010366\|Ga0126379_10281640	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1657	Open in IMG/M
3300010366\|Ga0126379_13716014	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	511	Open in IMG/M
3300010376\|Ga0126381_100430023	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1847	Open in IMG/M
3300010376\|Ga0126381_100518920	All Organisms → cellular organisms → Bacteria → Proteobacteria	1683	Open in IMG/M
3300010396\|Ga0134126_10558886	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1313	Open in IMG/M
3300010398\|Ga0126383_10026204	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	4557	Open in IMG/M
3300010401\|Ga0134121_11113079	Not Available	783	Open in IMG/M
3300012948\|Ga0126375_10024183	Not Available	2893	Open in IMG/M
3300012948\|Ga0126375_11072364	Not Available	661	Open in IMG/M
3300012948\|Ga0126375_11835185	Not Available	530	Open in IMG/M
3300012957\|Ga0164303_10504453	All Organisms → cellular organisms → Bacteria → Proteobacteria	775	Open in IMG/M
3300012958\|Ga0164299_10352794	All Organisms → cellular organisms → Bacteria → Proteobacteria	926	Open in IMG/M
3300012958\|Ga0164299_11201162	Not Available	574	Open in IMG/M
3300012971\|Ga0126369_11655870	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → unclassified Nitrobacter → Nitrobacter sp. Nb-311A	729	Open in IMG/M
3300013102\|Ga0157371_10519050	All Organisms → cellular organisms → Bacteria → Proteobacteria	881	Open in IMG/M
3300013297\|Ga0157378_10855298	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	938	Open in IMG/M
3300013307\|Ga0157372_12213054	Not Available	632	Open in IMG/M
3300014745\|Ga0157377_10224010	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1205	Open in IMG/M
3300015371\|Ga0132258_12859900	Not Available	1201	Open in IMG/M
3300015372\|Ga0132256_101306455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	838	Open in IMG/M
3300015373\|Ga0132257_100054317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4473	Open in IMG/M
3300015373\|Ga0132257_100883992	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1119	Open in IMG/M
3300015373\|Ga0132257_104110286	Not Available	529	Open in IMG/M
3300015374\|Ga0132255_100831699	Not Available	1377	Open in IMG/M
3300015374\|Ga0132255_101088470	All Organisms → cellular organisms → Bacteria → Proteobacteria	1201	Open in IMG/M
3300015374\|Ga0132255_102491864	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	790	Open in IMG/M
3300015374\|Ga0132255_103795125	All Organisms → cellular organisms → Bacteria → Proteobacteria	642	Open in IMG/M
3300017966\|Ga0187776_10435946	Not Available	884	Open in IMG/M
3300018054\|Ga0184621_10258916	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	619	Open in IMG/M
3300021478\|Ga0210402_10725601	All Organisms → cellular organisms → Bacteria → Proteobacteria	917	Open in IMG/M
3300021560\|Ga0126371_10010883	All Organisms → cellular organisms → Bacteria → Proteobacteria	8209	Open in IMG/M
3300021560\|Ga0126371_10111453	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2744	Open in IMG/M
3300025899\|Ga0207642_10316448	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	910	Open in IMG/M
3300025903\|Ga0207680_10508263	All Organisms → cellular organisms → Bacteria → Proteobacteria	858	Open in IMG/M
3300025903\|Ga0207680_11292684	Not Available	519	Open in IMG/M
3300025905\|Ga0207685_10322163	Not Available	771	Open in IMG/M
3300025916\|Ga0207663_11053247	All Organisms → cellular organisms → Bacteria → Proteobacteria	653	Open in IMG/M
3300025938\|Ga0207704_10059099	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2365	Open in IMG/M
3300026035\|Ga0207703_12156340	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	533	Open in IMG/M
3300026041\|Ga0207639_11233449	All Organisms → cellular organisms → Bacteria → Proteobacteria	702	Open in IMG/M
3300026142\|Ga0207698_12479415	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	529	Open in IMG/M
3300026819\|Ga0207765_119395	Not Available	527	Open in IMG/M
3300026959\|Ga0207852_1016566	Not Available	771	Open in IMG/M
3300027039\|Ga0207855_1041751	Not Available	620	Open in IMG/M
3300027326\|Ga0209731_1027344	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300027646\|Ga0209466_1118104	Not Available	539	Open in IMG/M
3300027765\|Ga0209073_10042462	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1463	Open in IMG/M
3300027873\|Ga0209814_10008890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3933	Open in IMG/M
3300027873\|Ga0209814_10315806	Not Available	681	Open in IMG/M
3300027874\|Ga0209465_10252384	All Organisms → cellular organisms → Bacteria → Proteobacteria	883	Open in IMG/M
3300027915\|Ga0209069_10298913	All Organisms → cellular organisms → Bacteria → Proteobacteria	854	Open in IMG/M
3300031226\|Ga0307497_10022459	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1966	Open in IMG/M
3300031455\|Ga0307505_10621157	All Organisms → cellular organisms → Bacteria → Proteobacteria	526	Open in IMG/M
3300031538\|Ga0310888_10115540	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1387	Open in IMG/M
3300031720\|Ga0307469_10261180	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → unclassified Microvirga → Microvirga sp. HBU67692	1401	Open in IMG/M
3300031740\|Ga0307468_100066517	Not Available	1977	Open in IMG/M
3300031744\|Ga0306918_10508668	Not Available	943	Open in IMG/M
3300031854\|Ga0310904_10287925	All Organisms → cellular organisms → Bacteria → Proteobacteria	1035	Open in IMG/M
3300031908\|Ga0310900_10024671	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3237	Open in IMG/M
3300032001\|Ga0306922_10263095	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1854	Open in IMG/M
3300032003\|Ga0310897_10209215	All Organisms → cellular organisms → Bacteria → Proteobacteria	854	Open in IMG/M
3300032013\|Ga0310906_10010256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3547	Open in IMG/M
3300032017\|Ga0310899_10309697	Not Available	735	Open in IMG/M
3300032180\|Ga0307471_100833909	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1089	Open in IMG/M
3300032205\|Ga0307472_100192701	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1540	Open in IMG/M
3300032205\|Ga0307472_102534389	Not Available	522	Open in IMG/M
3300032261\|Ga0306920_102237517	Not Available	759	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	70.90%
Host-Associated	Host-Associated	28.36%
Engineered	Engineered	0.75%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	67.16%
Plants	Host-Associated → Plants	28.36%
Aquatic	Environmental → Aquatic	3.73%
Solid Waste	Engineered → Solid Waste	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	67.16%
Rhizosphere	Host-Associated → Plants → Rhizosphere	14.18%
Rhizoplane	Host-Associated → Plants → Rhizoplane	13.43%
Sediment	Environmental → Aquatic → Sediment	3.73%
Roots	Host-Associated → Plants → Roots	0.75%
Grass	Engineered → Solid Waste → Grass	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	42.54%
Loam	Environmental → Terrestrial → Soil → Loam	23.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.19%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	6.72%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.72%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.73%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.99%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.75%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.75%
Composting	Engineered → Solid Waste → Grass → Composting	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.13%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	19.40%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.19%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	6.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.72%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.22%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.48%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.73%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.73%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.99%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.99%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.75%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.75%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.75%
Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor	0.75%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	17.91%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	17.16%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	6.72%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.73%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.73%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.99%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.99%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.24%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.24%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.49%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.49%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.49%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.49%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.49%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.49%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.49%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.49%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.49%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.75%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.75%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.75%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.75%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.75%
Sugar Cane Bagasse Incubating Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor → Sugar Cane Bagasse Incubating Bioreactor	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090015	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
2209111006	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Wild type Col-0	Host-Associated	Open in IMG/M
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000156	Sugar cane bagasse incubating bioreactor microbial communities from Sao Carlos, Brazil, that are aerobic and semianaerobic	Engineered	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300003911	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005164	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006194	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026819	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 59 (SPAdes)	Environmental	Open in IMG/M
3300026959	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 3 (SPAdes)	Environmental	Open in IMG/M
3300027039	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 14 (SPAdes)	Environmental	Open in IMG/M
3300027326	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027646	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031455	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 23_S	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPICI_01218630	2088090015	Soil	RDKAMGACCRGMADDSDHYNDVDVVISMLKAVYCRDGADVAVQAAKHMIAAAAALVTCENGPDETRRILRIVGGEAQGKAS
2213665829	2209111006	Arabidopsis Rhizosphere	MADDSDHYKDVNVVISMLNAVYRRDGADVAVETAKHMIAAAAALLTCEQGPDETRRILQIVGVAQGKTS
ICCgaii200_08755862	2228664021	Soil	MADDSDHYNDVDVVISMLKAVYCRDGADVAVQAAKHMIAAAAALVTCENGPDETRRILRIVGEAQGKAS
NODE_07348505	3300000156	Sugar Cane Bagasse Incubating Bioreactor	MADDSDHYQHADDAIALLKTVYCRDGAEVAVQAAKHMIAAAAALVTCHHGPDEARRVLRIVGEAQGKGS*
INPhiseqgaiiFebDRAFT_1015025942	3300000364	Soil	MADDSDHYNDVDVVISMLKAVYCRDGADVAVQAAKXMIAAAAALVTCENGPDETRRILRIVGEAQGKAS*
INPhiseqgaiiFebDRAFT_1015041882	3300000364	Soil	MGACCRGMADDSDHYKDVDVVLSMLKAVYCRDGAEGAVQAAKHMIAAAAALLTCEHGPNETRRILQIVGEAQGKAS*
F24TB_100517802	3300000550	Soil	MADDSDHYKDVDVVVSMLKAVYCRDGAEGAVQAAKHMIAAAAALLTCEHGPNETRRILQIVGEAQGKAS*
JGI12627J18819_103426382	3300001867	Forest Soil	MGACRSMAGDSDHYKDVNVVISLLEAVYCRDGADVAMQTAKNMIAAAAALLTCEQGPDETRRILRIVGEAQGKAS
JGI25405J52794_100748811	3300003911	Tabebuia Heterophylla Rhizosphere	MGACCRGMADDSDHYEDVDVVISMLKAVYCRDGADVAVQAAKHMIAAAAALVTCENGPDETRRILRIVGEAQGKTS*
JGI25405J52794_100852712	3300003911	Tabebuia Heterophylla Rhizosphere	MGACCRSMADDSDHKDLDVVISLLKAVYCRDGADVAVQTAKQMIAAAAALLTSEHGPDETRRILRIVGKAQGRTS*
Ga0062593_1007936202	3300004114	Soil	MADDSDHYKDVNVVISMLNAVYRRDGADVAVETAKHMIAAAAALLTCEQGPDETRRILQIVGVAQGKAS*
Ga0062590_1018899331	3300004157	Soil	MAADSDHHEDINVVISLLEAVYCRDGADMALQTAKHMIAAAAAFLTCERGPDETRRILRIVGEAQGKAS*
Ga0066398_101365162	3300004268	Tropical Forest Soil	MVDDSDHLKHADHAIAMLKAVYLRDGADVAVQAAKHMISAAAALITCEYGPDEARRILQIVGGAQGQTS*
Ga0062595_1021806902	3300004479	Soil	MADDSDHYNDVDVVISMLKAVYCRDGADVAVQAAKHMIAAAAALVTCENGPDETRRILRIVGEAQGKAS*
Ga0066815_100623651	3300005164	Soil	MADDSDHYKDVNVVISMLNAVYRRDGADVAVETAKHMIAAAAALLTCEQGPDETRRILQIVGVAQ
Ga0070676_101545601	3300005328	Miscanthus Rhizosphere	GMADDSDHYKDVNVVISMLNAVYRRDGADVAVETAKHMIAAAAALLTCEQGPDETRRILQIVGVAQGKAS*
Ga0066388_1000065613	3300005332	Tropical Forest Soil	MGACCPGMADDSDRYKDVDVVLSLLKAVYCRDGADVAVQTAKHMIAAAAALLTSEDGPDETRRILRIVGEAQGKTS*
Ga0066388_1000135364	3300005332	Tropical Forest Soil	MADDSDHYKYADDAIAMLKTVYCRDGADVAVQAAKHMIAAAAALVTCQYGPDEARRVLRIVGKAQGKAS*
Ga0066388_1000679351	3300005332	Tropical Forest Soil	CRDKAMGACCRSMADDSDHYKDVDVVISMLKAVYCRDGADVAVEAAKHMIAAAAALLTCEHGPNETRRILQIVGEAQGKAS*
Ga0066388_1001913283	3300005332	Tropical Forest Soil	MAGDSDHNQDVNVVISLLEAVYCRDGADVAVQTAKHMIAAAAALLTCEQGPDETRRVLRIVGEVQGKAS*
Ga0066388_1003533712	3300005332	Tropical Forest Soil	MADDSDHYKDVNVVISMLNAVYCRDGADMAVQTAKHMIAAAAALVTVEQGPDETRRILQIVGGAQGKVS*
Ga0066388_1005891492	3300005332	Tropical Forest Soil	MASDSDHHRDIKVVMSLLEAVYCRDGADVAMQTAKHMIAAAAALLTCEQGPDETRRILRIVGEAQGKAS*
Ga0066388_1007676423	3300005332	Tropical Forest Soil	MADDSHHYNDVDVVISMLNAVYCRDGADVAVQTAKHMIATAAALLTCEHGPDETRRILRIVGQAQGKTS*
Ga0066388_1016552732	3300005332	Tropical Forest Soil	MAGDSDHQEDVNVVISLLEAVYCRDGADVAVQTAKHMIAAAAALLTCEQGPNETRRILRIVGEAQGKAS*
Ga0066388_1081137321	3300005332	Tropical Forest Soil	ISLLEAVYCRDGADVAVQTAKHMIAAAAALLTCEQGPNETRRILQIVGEAQGKAS*
Ga0066388_1082213181	3300005332	Tropical Forest Soil	MGACCCGMADDSDRYKHADDAIDMLRAVYCRDGAEVAVQAAKHMIATAAALLTCQYGPDEARRILRIVGEAQGKAS*
Ga0066388_1086989412	3300005332	Tropical Forest Soil	GMADDSDHYKHADDTIAMLKTVYCRDGADVAVQAAKHMIAAAAALVTCQHGPDEARRVLRIVGDAQGKGS*
Ga0070687_1008401801	3300005343	Switchgrass Rhizosphere	TAAVFACRNKPVGACSRGMADDSDHYKDVNVVISMLNAVYRRDGADVAVETAKHMIAAAAALLTCEQGPDETRRILQIVGVAQGKAS*
Ga0070711_1004150322	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MAGDSDHHEDVNVVISLLEAVYCRDGADVAVQTAKHMIAAAAALLTCEQGPDETRRILRIVGEAQGKAS*
Ga0070697_1018683731	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MGACRGMAGDSDHHEDVNVVISLLEAVYCRDGADVAVQTAKHMIAAAAAFLTCERGPDETRRILRIVGEAQGKAS
Ga0068853_1011646322	3300005539	Corn Rhizosphere	GACSRGMADDSDHYKDVNVVISMLNAVYRRDGADVAVETAKHMIAAAAALLTCEQGPDETRRILQIVGVAQGKAS*
Ga0066905_1000122155	3300005713	Tropical Forest Soil	MADDSDHYNDVDVVISMLKAVYCRDGADVAVQAAKHMIAAAAALVTCENGPDETRRILRIVGEAQGTAS*
Ga0066905_1001565312	3300005713	Tropical Forest Soil	MGACCRGMADDSDHYEDVDVVISMLKAVYCRDGADVAVQAAKHMIAAAAALVTCENGPDETRRILWIVGEAQGKAS*
Ga0066905_1003512931	3300005713	Tropical Forest Soil	MPWAHAVGVMADDSDHFRHADHAIAMLKTVYLRDGADAAVQAAKYMIFAAAALITREYGPDEARRILRVVGGAQGQTS*
Ga0066905_1005057742	3300005713	Tropical Forest Soil	MVDDSDHLKHTDHAIAMLKAVYLRDGADAAVEAARHMISAAAALITCEHGPDEARRILRTVGGAQGQTY*
Ga0066903_1021084022	3300005764	Tropical Forest Soil	MAGDSDHHEDVNVVITLLEAVYCRDGADVAVQTAKHMIAAAAALLTCEQGPDETRRILRIVGEAQGKAS*
Ga0066903_1052872231	3300005764	Tropical Forest Soil	EDVNVVISLLEAVYCRDGADVAVQTAKHMIAAAAALLTCEQGPDETRRVLRIVGEAQGKAS*
Ga0066903_1056522652	3300005764	Tropical Forest Soil	MAGDSDSNQDVNVVISLLEAVYCRDGADVAVQTAKHMIAASAALLTCEQGPDETRR
Ga0068860_1007100911	3300005843	Switchgrass Rhizosphere	SYGMADDSDHYKDVNVVISMLNAVYRRDGADVAVETAKHMIAAAAALLTCEQGPDETRRILQIVGVAQGKAS*
Ga0075417_100188443	3300006049	Populus Rhizosphere	MTDDSHRHKDVDVVISLLKAVYCRDGADMAVQAAKHMIAAAAALLTCEHGPEETRRILRIVGEAQGKAS*
Ga0075026_1006569421	3300006057	Watersheds	MGACCRGMADDSDHYKDVDVVISLLKTVYCRDGADVAVQAAKHMIAAAAALLTCEHGPDETRRILRIVGEAQGKAS*
Ga0075018_100710582	3300006172	Watersheds	MADDSDHYKDVDVVIALLKTVYCRDGADVAVQAAKHMIAAAAALLTCEHGPDETRRILRIVGEAQGKAS*
Ga0075427_101068281	3300006194	Populus Rhizosphere	DKAIGACCRGMTDDSHRHKDVDVVISLLKAVYCRDGADMAVQAAKHMIAAAAALLTCEHGPEETRRILRIVGEAQGKAS*
Ga0068871_1007502992	3300006358	Miscanthus Rhizosphere	MAGDSDHHEDVNVVISLLEAVYCRDGADMALQTAKHMIAAAAAFLTCERGPDETRRILRIVGEAQGKAS*
Ga0079222_101147122	3300006755	Agricultural Soil	MTDDDSDHYKDVDVVISLLNAVYCRDGADMAVQAAKHMIAAAAACEHGPDETRRILRILGKAQGKAS*
Ga0079220_108445591	3300006806	Agricultural Soil	MADDSDHYKDVNVVISMLNAVYRRDGADVAVQTAKHMIAAAAALLTCEQGPDETRRILQIVGVAQGKAS*
Ga0075425_10000479318	3300006854	Populus Rhizosphere	MADDSDHYKDVNVVISTLNAVYRRDGADVAVQTAKHMIAAAAALLTCEQGPDETRRILQIVGVAQGKAS*
Ga0075434_1003666083	3300006871	Populus Rhizosphere	MADDSDHYKDVNVVISMLNAVYRRDGADVAVQTAKHMIAAAAALLTCEQGPDETRRILQIVGVAQGKTS*
Ga0075424_1000072382	3300006904	Populus Rhizosphere	MADDSDHYKDVNVVISMLNAVYRRDGADVAVETAKHMIAAAAALLTCEQGPDETRRILQIVGVAQGKTS*
Ga0075436_1003358471	3300006914	Populus Rhizosphere	MGACCRGMADDSDHYNDVDVVISMLKAVYCRDGADVAVQAAKHMIAAAAALVTCENGPDETRRILRIVGEAQGKAS*
Ga0079219_122913951	3300006954	Agricultural Soil	KPVGACSRGMADDSDHYKDVNVVISMLNAVYRRDGADVAVETAKHMIAAAAALLTCEQGPDETRRILQIVGVAQGKAS*
Ga0105250_106070102	3300009092	Switchgrass Rhizosphere	DHYKDVNVVISMLNAVYRRDGADVAVETAKHMIAAAAALLTCEQGPDETRRILQIVGVAQGKAS*
Ga0114129_109614463	3300009147	Populus Rhizosphere	RDKAIGACCRGMTDDSHRHKDVDVVISLLKAVYCRDGADMAVQAAKHMIAAAAALLTCEHGPEETRRILRIVGEAQGKAS*
Ga0126374_105677432	3300009792	Tropical Forest Soil	MADDSDHYKYADDAIAMLKTVYCRDGADVAVHAAKHMIAAAAALVTCQYGPDEARRVLRIVGKAQGKAS*
Ga0126380_100754933	3300010043	Tropical Forest Soil	MLRGMADDSDHYKHADDAIAMLKTVYCRDGADVAVQAAKHMIAAAAALVTCQYGPDEARRVLRIVAEVQGKAL*
Ga0126380_106018122	3300010043	Tropical Forest Soil	MADDSDHYKDVDVVISMLKAVYCRDGADVAVEAAKHMIAAAAALLTCEHGPNETRRILQIVGEAQGKAS*
Ga0126380_115335421	3300010043	Tropical Forest Soil	MADDSDHYKDVNVVISMLNAVYCRDGADKAVQTAKHMIAAAAALVTVEQGPDETRRILQIVGVAQGRAS*
Ga0126384_110178571	3300010046	Tropical Forest Soil	DRPPTSSDASCSDQTQSACCRGMADDSDHYKYADDAIAMLKTVYCRDGADVALQAAKHMIAAAAALVTCQYGPDEARRVLRIVGKAQGKAS*
Ga0126384_116772441	3300010046	Tropical Forest Soil	MADDSDHYEDVNVVISMLNAVYCRDGADMAVHTAKLMIAAAAALVTVEQGPDETRRILQIVGVAQGKAS*
Ga0126382_100348262	3300010047	Tropical Forest Soil	MPWAHAVGVMADDSDHFRHADHAIAMLKTVYLRDGADAAVQAAKHMIFAAAALITREYGPDEARRILRVVGGAQGQTS*
Ga0126382_111079422	3300010047	Tropical Forest Soil	MAGDSDHNQDVNVVISLLEAVYCRDGADVAVQTAKHMIAAAAALLTCEQGPNETRRILRIVGEAQGKAS*
Ga0126370_103280422	3300010358	Tropical Forest Soil	MLRGMADDSDHYKHADDAIAMLKTVYCRDGADVAVQAAKHMIAAAAALVTCQYGPDEARRVLRIVAEVQVKAS*
Ga0126378_105154271	3300010361	Tropical Forest Soil	EDVNVVISLLEAVYCRDGADVAVQTAKHMIAAAAALLTCEQGPNETRRILRIVGEAQGKAS*
Ga0126377_101786552	3300010362	Tropical Forest Soil	MPWAHAVGVMADDSDHFRHVDHAIAMLKTVYLRDGADAAVQAAKHMIFAAAALITREYGPDEARRILRVVGGAQGQTS*
Ga0126377_134370722	3300010362	Tropical Forest Soil	VDVVISMLKAVYCRDGADVAVQAAKHMIAAAAALVTCENGPDETRRILRIVGEAQGKAS*
Ga0126379_102816403	3300010366	Tropical Forest Soil	MADDSDHYKYADDAIAMLKTVYCRDGADVAVQAANHMIAAAAALVTCQYGPDEARRVLRIVGKAQGKAS*
Ga0126379_137160142	3300010366	Tropical Forest Soil	VVISLLEAVYCRDGADVAVQTAKHMIAAAAALLTCEQGPDETRRVLRIVGEAQGKAS*
Ga0126381_1004300233	3300010376	Tropical Forest Soil	MADDSDHYKYADDAIAMLKTVYCRDGADVALQAAKHMIAAAAALVTCQYGPDEARRVLRIVGKAQGKAS*
Ga0126381_1005189202	3300010376	Tropical Forest Soil	MADDSDHCRDVDVVLSLLNAVYCRDGADMAVQTAKHMIAAAAALLTCEHGPDETRRILRIVGEAQGKTS*
Ga0134126_105588861	3300010396	Terrestrial Soil	YKDVNVVISMLNAVYRRDGADVAVETAKHMIAAAAALLTCEQGPDETRRILQIVGVAQGKAS*
Ga0126383_100262048	3300010398	Tropical Forest Soil	DHAIAMLKAVYLRDGADVAVQAAKHMISAAAALITCEYGPDEARRILQIVGGAQGQTS*
Ga0134121_111130792	3300010401	Terrestrial Soil	MADDSDHYKDVNVVISMLNAVYRRDGADVAVQTAKHMIAAAAALLTCEQGPDETRRILQIVCVAQGKAS*
Ga0126375_100241835	3300012948	Tropical Forest Soil	MVDDSDHLKHTDHAIAMLKAVYLRDGADAAVEAARHMISAAAALITCEHGPDEARRILRTVGGAQGQTS*
Ga0126375_110723641	3300012948	Tropical Forest Soil	MADDSDHYKDVNVVISMLNAVYCRDGADMAVHTAKLMIAAAAALVTVEQGPDETRRILQIVGGAQGKVS*
Ga0126375_118351851	3300012948	Tropical Forest Soil	MGACCRGMADDSDRYKHADDAIDMLRAVYCRDGAEVAVQAAKHMIATAAALLTCQYGPDEARRILRIVGEAQGKAS*
Ga0164303_105044532	3300012957	Soil	DDSDHYKDVNVVISMLNAVYRRDGADVAVQTAKHMIAAAAALLTCEQGPDETRRILQIVGVAQGKAS*
Ga0164299_103527942	3300012958	Soil	MAADSDHHEDINVVISLLEAVYCRDGADMALQTAKHMIAAAAALLTCEQGPDETRRILRIVGEAQGKAS*
Ga0164299_112011621	3300012958	Soil	MTDDSDHYKDVDVVISLLNAVYSRDGADMAVHAAKHMIAAAAALLTCEHGPDETRRILQIVGNAQGKAS*
Ga0126369_116558702	3300012971	Tropical Forest Soil	MAGDSDHHEDVNVVISLLEAVYCRDGADVAVQTAKHMIAAAAALLTCEQGPDETRRVLRIVGEVQGKAS*
Ga0157371_105190502	3300013102	Corn Rhizosphere	MAADSDHHEDINVVISLLEAVDCRDGADMALQTAKHMIAAAAAFLTCERGPDETRRILRIVGEAQGKAS*
Ga0157378_108552983	3300013297	Miscanthus Rhizosphere	MAADSDHHEDINVVISLLEAVYCRDGADMALQTAKHMIAAAAAFLTCERGPDETRRILRIVGEAQ
Ga0157372_122130543	3300013307	Corn Rhizosphere	MAADSDHHEDINVVISLLEAVYCRDGADMALQTAKHMIAAAAAFLTCERGPDETRRILRIVGEAQG
Ga0157377_102240102	3300014745	Miscanthus Rhizosphere	MAADSDHHEDINVVRSLLEAVYCRDGADMALQTAKHMIAAAAAFLTCERGPDETRRILRIVGEAQGKAS*
Ga0157379_111696222	3300014968	Switchgrass Rhizosphere	ISMLNAVYRRDGADVAVETAKHMIAAAAALLTCEQGPDETRRILQIVGVAQGKAS*
Ga0132258_128599003	3300015371	Arabidopsis Rhizosphere	MADDSDHYRHADNAIAMLKTVYCRDGADVAVQAAKHMIAAAAALVTCQHGPDEARRVLRIVGDAQGKGS*
Ga0132256_1013064551	3300015372	Arabidopsis Rhizosphere	MADDSDHYKDVNVVISMLNAVYRRDGADVAVETAKHMIAAAAALLTCEQGPDETRRILQIVGVAQGK
Ga0132257_1000543171	3300015373	Arabidopsis Rhizosphere	MAGDSDHYKDVNVVISLLEAVYCRDGADVAMQTAKDMIAAAAALLTCEQGPDETRRVLRIVGEAQGKAS*
Ga0132257_1008839921	3300015373	Arabidopsis Rhizosphere	MAGDSDHQEDVNVVISLLEAVYCRDGADVAVQTAKHMIAAAAALLTCEQGPDETRRILRIVGEAQGKAS*
Ga0132257_1041102862	3300015373	Arabidopsis Rhizosphere	MADDSDHYKHADDAIALLKTVYCRDGAEVAVQAAKHMIAAAAALVTCQYGPEEARRVLRIVGDAQGKGS*
Ga0132255_1008316993	3300015374	Arabidopsis Rhizosphere	MADDSDHYKHADNAIAMLKTVYCRDGADVAVQAAKHMIAAAAALVTCQHGPDEARRVLRIVGDAQGKGS*
Ga0132255_1010884703	3300015374	Arabidopsis Rhizosphere	MAGDSDHYKDVNVVISMLNAVYRRDGADVAVETAKHMIAAAAALLTCEQGPDETRRILQIVGVAQGKAS*
Ga0132255_1024918641	3300015374	Arabidopsis Rhizosphere	MADDSDHYKDVNVVISMLNAVYRRDGADVAVETAKHMIAAAAALLTCEQGPDETRRI
Ga0132255_1037951252	3300015374	Arabidopsis Rhizosphere	DSNQDVNVVISLLEAVYCRDGAGVAVQTAKHMIATAAALLTCEQGPDETRRILRIVGEAQGKAS*
Ga0187776_104359461	3300017966	Tropical Peatland	MADDSDHYKHADAVIAMLKAVYCRDGAEVAVQAAKHMISAAAALLTCQYGPDEARRILRIVGEAQGKAS
Ga0184621_102589162	3300018054	Groundwater Sediment	MGACCRGMADDSNHYKDVDVVISVLKAVYCRDGADVAVQTAKQMIAAAAALVTCEHGPDETRRILRIVGEAQGNAS
Ga0184611_10081124	3300018067	Groundwater Sediment	MSVPPSSCGDKAMGACCCGMADDSDYYKHGDDAFAMLKAVYCRDGADVAVQAAKHMIAVAAALLTCQYGPDGARRILSTIGEAQGKAS
Ga0210402_107256012	3300021478	Soil	MAGDSDHHEDVNVVISLLEAVYCRDGADVAVQTAKHMIAAAAALLTCEQGPDETRRLLRIVGEAQGKAS
Ga0126371_100108833	3300021560	Tropical Forest Soil	MAGDSDHQEDVNVVISLLEAVYCRDGADVAVQTAKHMIAAAAALLTCEQGPNETRRILRIVGEAQGKAS
Ga0126371_101114532	3300021560	Tropical Forest Soil	MGACCPGMADDSDRYKDVDVVLSLLKAVYCRDGADVAVQTAKHMIAAAAALLTSEDGPDETRRILRIVGEAQGKTS
Ga0207642_103164482	3300025899	Miscanthus Rhizosphere	MAADSDHHEDINVVISLLEAVYCRDGADMALQTAKHMIAAAAAFLTCERGPDETRRILRIVGEAQGKAS
Ga0207680_105082632	3300025903	Switchgrass Rhizosphere	DHYKDVNVVISMLNAVYRRDGADVAVETAKHMIAAAAALLTCEQGPDETRRILQIVGVAQGKAS
Ga0207680_112926842	3300025903	Switchgrass Rhizosphere	MAADSDHHEDINVVISLLEAVYCRDGADMALQTAKHMIAAAAAFLTCERGPDETRRILRIVGEAQGK
Ga0207685_103221632	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MAGDSDHHEDVNVVISLLEAVYCRDGADVAVQTAKHMIAAAAALLTCEKGPDETRRILRIVGEAQGKAS
Ga0207663_110532472	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	NKPVGACSRGMADDSDHYKDVNVVISMLNAVYRRDGADVAVETAKHMIAAAAALLTCEQGPDETRRILQIVGVAQGKAS
Ga0207704_100590995	3300025938	Miscanthus Rhizosphere	RNKPVGACSYGMADDSDHYKDVNVVISMLNAVYRRDGADVAVETAKHMIAAAAALLTCEQGPDETRRILQIVGVAQGKAS
Ga0207703_121563402	3300026035	Switchgrass Rhizosphere	SRGMADDSDHYKDVNVVISMLNAVYRRDGADVAVETAKHMIAAAAALLTCEQGPDETRRILQIVGVAQGKAS
Ga0207639_112334492	3300026041	Corn Rhizosphere	KDVNVVISMLNAVYRRDGADVAVETAKHMIAAAAALLTCEQGPDETRRILQIVGVAQGKA
Ga0207698_124794152	3300026142	Corn Rhizosphere	SYGMADDSDHYKDVNVVISMLNAVYRRDGADVAVETAKHMIAAAAALLTCEQGPDETRRILQIVGVAQGKAS
Ga0207765_1193951	3300026819	Tropical Forest Soil	MGASCCDMPDDSDRHNHGENAIAMLKAVYCRDGADVATQAAKDMIAIATALLTGQHGPDEARRILRIVGEAQGRAS
Ga0207852_10165662	3300026959	Tropical Forest Soil	MPDDSDRHSHGENAIAMLKAVYCRDGADVATQAAKDMIAIATALLTGQHGPDEARRILRIVGEAQGRAS
Ga0207855_10417512	3300027039	Tropical Forest Soil	MSASCCDMPDDSDRHSHGENAIAMLKAVYCRDGADVATQAAKDMIAIATALLTGQHGPDEARRILRIVGEAQGRAS
Ga0209731_10273442	3300027326	Forest Soil	MAGDSDHYKDVNVVISLLEAVYCRDGADVAMQTAKNMIAAAAALLTCEQGPDETRRI
Ga0209466_11181041	3300027646	Tropical Forest Soil	MVDDSDHLKHADHAIAMLKAVYLRDGADVAVQAAKHMISAAAALITCEYGPDEARRI
Ga0209073_100424622	3300027765	Agricultural Soil	MTDDDSDHYKDVDVVISLLNAVYCRDGADMAVQAAKHMIAAAAACEHGPDETRRILRILGKAQGKAS
Ga0209814_100088903	3300027873	Populus Rhizosphere	MTDDSHRHKDVDVVISLLKAVYCRDGADMAVQAAKHMIAAAAALLTCEHGPEETRRILRIVGEAQGKAS
Ga0209814_103158061	3300027873	Populus Rhizosphere	MGACCRGMADDSDHYKDVDVVLSMLKAVYCRDGAEGAVQAAKHMIAAAAALLTCEHGPNETRRILQIVGEAQGKAS
Ga0209465_102523842	3300027874	Tropical Forest Soil	MASDSDHHRDIKVVMSLLEAVYCRDGADVAMQTAKHMIAAAAALLTCEQGPDETRRILRIVGEAQGKAS
Ga0209069_102989132	3300027915	Watersheds	MADDSDHYKDVNVVISLLEAVYCRDGADVAVQTAKHMIAAAAALLTCEQGPDETRRILRIVGEAQGKAS
Ga0307497_100224591	3300031226	Soil	MGACCRGMADDSDHYKDVNVVISMLNAVYRRDGADVAVETAKHMIAAAAALLTCEQGPDETRRILQIVGVAQGKAS
Ga0307505_106211572	3300031455	Soil	GVAGDSDHHEDVNVVISLLEAVYCRDGADVAVQTAKHMIAAAAALLTCEQGPDETRRVLRIVGEAQGKAS
Ga0310888_101155402	3300031538	Soil	MADDSDHYKDVNVVISMLNAVYRRDGADVAVETAKHMIAAAAALLTCEQGPDETRRILQIVGVAQGEAS
Ga0307469_102611801	3300031720	Hardwood Forest Soil	MAGDSDHHEDVNVVISLLEAVYCRDGADVALQTAKHMIAAAAALLTCEQGPDETRRILRIVGEAQGKA
Ga0307468_1000665172	3300031740	Hardwood Forest Soil	MAGDSDHHEDVNVVISLLEAVYCRDGADVALQTAKHMIAAAAALLTCEQGPDETRRILRIVGEAQGKAS
Ga0306918_105086681	3300031744	Soil	MPDDSDRHNHGETAIAMLKAVYCRHGADVATQAAKDMIAVATALLTCQHGPDEARRILRIVG
Ga0310904_102879251	3300031854	Soil	RNKPVGACSRGMADDSDHYKDVNVVISMLNAVYRRDGADVAVQTAKHMIAAAAALLTCEQGPDETRRILQIVGVAQGKAS
Ga0310900_100246715	3300031908	Soil	MADDSDHYKDVNVVISMLNAVYRRDGADVAVQTAKHMIAAAAALLTCEQGPDETRRILQIVGVAQGKAS
Ga0306922_102630952	3300032001	Soil	MGASCCDMPDDSDRHNHGETAIAMLKAVYCRHGADVATQAAKDMIAVATALLTCQHGPDEARRILRIVGEAQGRAS
Ga0310897_102092152	3300032003	Soil	VFACRNKPVGACSRGMADDSDHYKDVNVVISMLNAVYRRDGADVAVETAKHMIAAAAALLTCEQGPDETRRILQIVGVAQGKAS
Ga0310906_100102565	3300032013	Soil	MADDSDHYKDVNVVISTLNAVYRRDGADVAVQTAKHMIAAAAALLTCEQGPDETRRILQIVGVAQGKAS
Ga0310899_103096972	3300032017	Soil	MADDSDHYKDVNVVISMLNAVYRRDGADVAVETAKHMIAAAAALLTCEQGPDETRRILQI
Ga0307471_1008339093	3300032180	Hardwood Forest Soil	MDDDSTHYKHADEAIAMLKTIYCRDGADAAVQAAKHMISAAAALVTCQYGPDEARRILWIVGEAQGKAS
Ga0307472_1001927011	3300032205	Hardwood Forest Soil	MIDDSDHYKDVDVVISLLNAVYCRDGADMAVQAAKHMIAAAAALLTCEHGPGETRRILRIVGNAQGKAS
Ga0307472_1025343891	3300032205	Hardwood Forest Soil	MAGDSDHHEDVNVVISLLEAVYCRDGADVAVQTAKHMIAAAAALLTCEQGPDETRRILRIVGEAQGKVS
Ga0306920_1022375172	3300032261	Soil	CVATSCGDKAMGASCCDMPDDSDRHNHGETAIAMLKAVYCRHGADVATQAAKDMIAVATALLTCQHGPDEARRILRIVGEAQGRAS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F059314

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences