Metagenome Family F059327

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F059327
Family Type	Metagenome
Number of Sequences	134
Average Sequence Length	73 residues
Representative Sequence	MPRLPRKPSAPRPRGAVGAMAASLARRKAAREPRVVLTEPGGHPRTLEPDDPAAAPLLDAAERLISAAQRRSGA
Number of Associated Samples	89
Number of Associated Scaffolds	134

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	64.93 %
% of genes near scaffold ends (potentially truncated)	26.87 %
% of genes from short scaffolds (< 2000 bps)	85.82 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (76.119 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (28.358 % of family members)
Environment Ontology (ENVO)	Unclassified (35.075 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (61.940 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 33.33% β-sheet: 7.84% Coil/Unstructured: 58.82%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 134 Family Scaffolds
PF00216	Bac_DNA_binding	54.48
PF16916	ZT_dimer	9.70
PF00215	OMPdecase	8.96
PF01725	Ham1p_like	2.24
PF03725	RNase_PH_C	2.24
PF00378	ECH_1	0.75

COG ID	Name	Functional Category	% Frequency in 134 Family Scaffolds
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	54.48
COG0127	Inosine/xanthosine triphosphate pyrophosphatase, all-alpha NTP-PPase family	Nucleotide transport and metabolism [F]	2.24
COG0689	Ribonuclease PH	Translation, ribosomal structure and biogenesis [J]	2.24
COG1185	Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase)	Translation, ribosomal structure and biogenesis [J]	2.24
COG2123	Exosome complex RNA-binding protein Rrp42, RNase PH superfamily	Intracellular trafficking, secretion, and vesicular transport [U]	2.24

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	76.12 %
Unclassified	root	N/A	23.88 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	76.12 %
Unclassified	root	N/A	23.88 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	76.12 %
Unclassified	root	N/A	23.88 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	55.97 %
Unclassified	root	N/A	23.88 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	55.97 %
Unclassified	root	N/A	23.88 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	50.75 %
Unclassified	root	N/A	23.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.75 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.75 %

Name	Rank	Taxonomy	Distribution
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	48.51 %
Unclassified	root	N/A	23.88 %
Thermoleophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales	1.49 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.75 %

Name	Rank	Taxonomy	Distribution
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	47.76 %
Unclassified	root	N/A	23.88 %
Thermoleophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae	1.49 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.75 %

Name	Rank	Taxonomy	Distribution
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	47.76 %
Unclassified	root	N/A	23.88 %
unclassified Thermoleophilaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae	1.49 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.75 %

Name	Rank	Taxonomy	Distribution
unclassified Solirubrobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter	37.31 %
Unclassified	root	N/A	23.88 %
Thermoleophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	1.49 %
Solirubrobacter soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	0.75 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.75 %

Name	Rank	Taxonomy	Distribution
Solirubrobacter sp. URHD0082	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	29.85 %
Unclassified	root	N/A	23.88 %
Solirubrobacter sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp.	7.46 %
Thermoleophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	1.49 %
Solirubrobacter soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	0.75 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003203\|JGI25406J46586_10090737	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	923	Open in IMG/M
3300003998\|Ga0055472_10141531	All Organisms → cellular organisms → Bacteria	708	Open in IMG/M
3300004013\|Ga0055465_10103725	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp.	853	Open in IMG/M
3300004081\|Ga0063454_100597490	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	805	Open in IMG/M
3300005093\|Ga0062594_101573975	Not Available	679	Open in IMG/M
3300005332\|Ga0066388_106923220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	571	Open in IMG/M
3300005339\|Ga0070660_101648920	Not Available	546	Open in IMG/M
3300005441\|Ga0070700_100370519	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp.	1068	Open in IMG/M
3300005457\|Ga0070662_100640561	All Organisms → cellular organisms → Bacteria	896	Open in IMG/M
3300005562\|Ga0058697_10343057	Not Available	725	Open in IMG/M
3300005563\|Ga0068855_101430208	Not Available	712	Open in IMG/M
3300005577\|Ga0068857_100816579	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp.	891	Open in IMG/M
3300005615\|Ga0070702_100155632	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp.	1472	Open in IMG/M
3300005840\|Ga0068870_10338263	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp.	962	Open in IMG/M
3300005937\|Ga0081455_10643530	All Organisms → cellular organisms → Bacteria	684	Open in IMG/M
3300005981\|Ga0081538_10004075	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	13591	Open in IMG/M
3300005981\|Ga0081538_10038453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	3086	Open in IMG/M
3300005981\|Ga0081538_10094960	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1525	Open in IMG/M
3300005981\|Ga0081538_10109775	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	1358	Open in IMG/M
3300005981\|Ga0081538_10176666	All Organisms → cellular organisms → Bacteria	921	Open in IMG/M
3300005981\|Ga0081538_10229580	All Organisms → cellular organisms → Bacteria	727	Open in IMG/M
3300005985\|Ga0081539_10000855	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	58253	Open in IMG/M
3300006046\|Ga0066652_100308092	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp.	1410	Open in IMG/M
3300006169\|Ga0082029_1162627	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	1417	Open in IMG/M
3300006844\|Ga0075428_100449929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1380	Open in IMG/M
3300006844\|Ga0075428_102046552	Not Available	593	Open in IMG/M
3300006844\|Ga0075428_102728133	Not Available	503	Open in IMG/M
3300006845\|Ga0075421_102317740	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	564	Open in IMG/M
3300006846\|Ga0075430_100714844	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp.	826	Open in IMG/M
3300006846\|Ga0075430_101247276	Not Available	612	Open in IMG/M
3300006854\|Ga0075425_100913958	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp.	1003	Open in IMG/M
3300006881\|Ga0068865_102219032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	500	Open in IMG/M
3300006904\|Ga0075424_101146965	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	828	Open in IMG/M
3300006918\|Ga0079216_10913271	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300006969\|Ga0075419_10287132	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp.	1107	Open in IMG/M
3300009094\|Ga0111539_10088781	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	3632	Open in IMG/M
3300009094\|Ga0111539_11520765	Not Available	776	Open in IMG/M
3300009098\|Ga0105245_11403645	All Organisms → cellular organisms → Bacteria	748	Open in IMG/M
3300009098\|Ga0105245_12519217	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300009100\|Ga0075418_12859824	Not Available	527	Open in IMG/M
3300009100\|Ga0075418_13107274	Not Available	506	Open in IMG/M
3300009147\|Ga0114129_10678388	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	1327	Open in IMG/M
3300009156\|Ga0111538_11804360	All Organisms → cellular organisms → Bacteria	770	Open in IMG/M
3300009156\|Ga0111538_11821927	Not Available	766	Open in IMG/M
3300009545\|Ga0105237_11894267	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300010039\|Ga0126309_10343299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	876	Open in IMG/M
3300010040\|Ga0126308_10293446	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp.	1067	Open in IMG/M
3300010041\|Ga0126312_11101319	Not Available	583	Open in IMG/M
3300010166\|Ga0126306_10088240	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	2220	Open in IMG/M
3300010371\|Ga0134125_10890124	Not Available	978	Open in IMG/M
3300010397\|Ga0134124_11385428	All Organisms → cellular organisms → Bacteria	728	Open in IMG/M
3300010399\|Ga0134127_11017760	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	889	Open in IMG/M
3300010401\|Ga0134121_11868858	Not Available	629	Open in IMG/M
3300010403\|Ga0134123_11190780	Not Available	791	Open in IMG/M
3300012681\|Ga0136613_10018034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	4022	Open in IMG/M
3300013011\|Ga0169967_1056133	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300013102\|Ga0157371_10385680	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1023	Open in IMG/M
3300013105\|Ga0157369_12689747	Not Available	501	Open in IMG/M
3300013306\|Ga0163162_10508401	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	1335	Open in IMG/M
3300014267\|Ga0075313_1215171	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300014488\|Ga0182001_10525806	Not Available	551	Open in IMG/M
3300015371\|Ga0132258_13386331	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	1095	Open in IMG/M
3300015374\|Ga0132255_101550862	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1003	Open in IMG/M
3300017792\|Ga0163161_11301299	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300017965\|Ga0190266_11218867	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	523	Open in IMG/M
3300018073\|Ga0184624_10059102	All Organisms → cellular organisms → Bacteria	1572	Open in IMG/M
3300018422\|Ga0190265_10072390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	3118	Open in IMG/M
3300018422\|Ga0190265_10122751	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	2486	Open in IMG/M
3300018422\|Ga0190265_10131368	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	2413	Open in IMG/M
3300018422\|Ga0190265_10140678	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	2343	Open in IMG/M
3300018422\|Ga0190265_10144685	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	2315	Open in IMG/M
3300018422\|Ga0190265_10148698	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	2287	Open in IMG/M
3300018422\|Ga0190265_10194570	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	2032	Open in IMG/M
3300018422\|Ga0190265_10357910	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	1548	Open in IMG/M
3300018422\|Ga0190265_10603312	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1217	Open in IMG/M
3300018422\|Ga0190265_10650839	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1174	Open in IMG/M
3300018422\|Ga0190265_11029036	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	945	Open in IMG/M
3300018422\|Ga0190265_11324561	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	836	Open in IMG/M
3300018422\|Ga0190265_11511957	All Organisms → cellular organisms → Bacteria	784	Open in IMG/M
3300018422\|Ga0190265_11765411	All Organisms → cellular organisms → Bacteria	728	Open in IMG/M
3300018422\|Ga0190265_12004686	Not Available	684	Open in IMG/M
3300018429\|Ga0190272_10079644	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	2022	Open in IMG/M
3300018429\|Ga0190272_10954859	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	812	Open in IMG/M
3300018432\|Ga0190275_10270227	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	1651	Open in IMG/M
3300018466\|Ga0190268_10058705	All Organisms → cellular organisms → Bacteria	1574	Open in IMG/M
3300018466\|Ga0190268_10105969	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1321	Open in IMG/M
3300018466\|Ga0190268_11254088	Not Available	620	Open in IMG/M
3300018466\|Ga0190268_11578308	Not Available	576	Open in IMG/M
3300018469\|Ga0190270_10396734	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	1275	Open in IMG/M
3300018469\|Ga0190270_10544553	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1118	Open in IMG/M
3300018469\|Ga0190270_10593710	Not Available	1077	Open in IMG/M
3300018469\|Ga0190270_11545563	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300018481\|Ga0190271_10209913	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	1947	Open in IMG/M
3300019377\|Ga0190264_10041408	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	1775	Open in IMG/M
3300019377\|Ga0190264_10308306	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	964	Open in IMG/M
3300019377\|Ga0190264_11426315	Not Available	595	Open in IMG/M
3300019884\|Ga0193741_1092794	All Organisms → cellular organisms → Bacteria	774	Open in IMG/M
3300020215\|Ga0196963_10333600	Not Available	673	Open in IMG/M
3300025932\|Ga0207690_10122609	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	1890	Open in IMG/M
3300025933\|Ga0207706_10317239	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	1357	Open in IMG/M
3300025940\|Ga0207691_11470229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	558	Open in IMG/M
3300025961\|Ga0207712_10167870	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	1712	Open in IMG/M
3300025972\|Ga0207668_10232703	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	1487	Open in IMG/M
3300026088\|Ga0207641_11664381	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300026121\|Ga0207683_10393939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	1274	Open in IMG/M
3300026142\|Ga0207698_11393382	All Organisms → cellular organisms → Bacteria	716	Open in IMG/M
3300026535\|Ga0256867_10247168	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300027907\|Ga0207428_10064295	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	2897	Open in IMG/M
3300027907\|Ga0207428_10117884	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	2037	Open in IMG/M
3300028722\|Ga0307319_10027556	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	1753	Open in IMG/M
3300028744\|Ga0307318_10377658	Not Available	501	Open in IMG/M
3300028802\|Ga0307503_10212771	Not Available	923	Open in IMG/M
3300031228\|Ga0299914_10046973	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	3674	Open in IMG/M
3300031229\|Ga0299913_10041811	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	4358	Open in IMG/M
3300031229\|Ga0299913_10434992	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	1299	Open in IMG/M
3300031229\|Ga0299913_10582187	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	1102	Open in IMG/M
3300031548\|Ga0307408_101540222	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300031548\|Ga0307408_102237634	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	529	Open in IMG/M
3300031731\|Ga0307405_10035797	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	2969	Open in IMG/M
3300031824\|Ga0307413_10140265	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	1669	Open in IMG/M
3300031824\|Ga0307413_10742622	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	819	Open in IMG/M
3300031901\|Ga0307406_10542018	All Organisms → cellular organisms → Bacteria	950	Open in IMG/M
3300031901\|Ga0307406_11159719	Not Available	669	Open in IMG/M
3300031901\|Ga0307406_11538064	Not Available	586	Open in IMG/M
3300031903\|Ga0307407_10726821	Not Available	750	Open in IMG/M
3300031995\|Ga0307409_100723492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	997	Open in IMG/M
3300032002\|Ga0307416_100619775	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	1164	Open in IMG/M
3300032002\|Ga0307416_100740735	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	1075	Open in IMG/M
3300032002\|Ga0307416_103530768	Not Available	523	Open in IMG/M
3300032004\|Ga0307414_12118148	Not Available	525	Open in IMG/M
3300032005\|Ga0307411_10364665	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	1183	Open in IMG/M
3300032080\|Ga0326721_10370570	All Organisms → cellular organisms → Bacteria	821	Open in IMG/M
3300032080\|Ga0326721_11132106	Not Available	505	Open in IMG/M
3300034384\|Ga0372946_0627472	Not Available	520	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	50.75%
Host-Associated	Host-Associated	49.25%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	49.25%
Terrestrial	Environmental → Terrestrial	47.76%
Aquatic	Environmental → Aquatic	2.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	47.01%
Rhizosphere	Host-Associated → Plants → Rhizosphere	33.58%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.45%
Roots	Host-Associated → Plants → Roots	4.48%
Marine	Environmental → Aquatic → Marine	1.49%
Freshwater	Environmental → Aquatic → Freshwater	0.75%
Sediment	Environmental → Aquatic → Sediment	0.75%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.75%
Phylloplane	Host-Associated → Plants → Phylloplane	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	42.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	29.10%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.21%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	4.48%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.48%
Loam	Environmental → Terrestrial → Soil → Loam	2.99%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.49%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.49%
Ice	Environmental → Aquatic → Freshwater → Ice	0.75%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.75%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.75%
Sand	Environmental → Terrestrial → Soil → Sand	0.75%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.75%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.75%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	36.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	29.10%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.21%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	4.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.48%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	2.99%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.49%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.49%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.49%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.49%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.75%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.75%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.75%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.75%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.75%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.75%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.75%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.75%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.75%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	28.36%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	13.43%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	11.19%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	4.48%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.73%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	2.99%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.99%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.24%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	2.24%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.49%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.49%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.49%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.49%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.49%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.49%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.49%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.75%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.75%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.75%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.75%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.75%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.75%
Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Rock	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.75%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003203	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300003998	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D2	Environmental	Open in IMG/M
3300004013	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012681	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ272 (21.06)	Environmental	Open in IMG/M
3300013011	Gypsum crust endolithic microbial communities from the Atacama Desert, Chile - KM37	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014267	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailC_D1	Environmental	Open in IMG/M
3300014488	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019884	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2s2	Environmental	Open in IMG/M
3300020215	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_5	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026535	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (HiSeq)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300031228	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032080	Soil microbial communities from Southern Great Plains, Lamont, Oklahoma, United States - SGP_1_2016	Environmental	Open in IMG/M
3300034384	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_KNG_2.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25406J46586_100907373	3300003203	Tabebuia Heterophylla Rhizosphere	PRGAVGAMAASLARRKAAREPRVVLTEPGGHPRALDADDPAAGPLLEAADRLISAAQRRSGA*
Ga0055472_101415311	3300003998	Natural And Restored Wetlands	MPRLPRKPSAPRPRGAVGAMAASLARRKAAREPRVVLTDPGGHPRTLDPADPATAPLLDAAERLLTAVEGRSDA*
Ga0055465_101037252	3300004013	Natural And Restored Wetlands	VPRKPKPPAPRGAVGAVAASLARRKAAREPRVVLTDPGGHPRTLEPEDPAATPLLEAAERLISTAQRQSEAD*
Ga0063454_1005974901	3300004081	Soil	MPRKPKPPAPRGAVGAVAASLARRKAAREPRVVLTDPGGHPRTLEPSDPASGPLLEAAERLISAAQRQSDPD*
Ga0062594_1015739751	3300005093	Soil	MPRKPKPPAPRGAVGAVAASLARRKAAREPRVVLTDPGGHPRTLEPDDPAATPLLEAAERLISTAQRHSEPG*
Ga0066388_1069232201	3300005332	Tropical Forest Soil	MAKKKPTAPRPRGAVGAMAASLSRRKAAREPRVMLTEPGGHPRTLEPDDPAAGPLLDAAERLISASQRRSGV*
Ga0070660_1016489201	3300005339	Corn Rhizosphere	MPRKPKPPAPRGAVGAVAASLARRKAAREPRVVLTDPGGHPRTLEPDDPAATPLLEAAERLISTAQRHSETG*
Ga0070700_1003705192	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MPRKPKPPAPRGAVGAVAASLARRKAAREPRVVLTDPGGHPRTLEPDDPAATPLLEAAERLISTAQRHSERG*
Ga0070662_1006405612	3300005457	Corn Rhizosphere	RGAVGAVAASLARRKAAREPRVVLTDPGGHPRTLEPDDPAATPLLEAAERLISTAQRHSETG*
Ga0058697_103430572	3300005562	Agave	MPRLPRKPTAPRPRGAVGAMAASLARRKAAREPRVVLTEPGGHPRTLDSDDPAAEPLLEAAERLISAAQRRSGV*
Ga0068855_1014302081	3300005563	Corn Rhizosphere	MPRKPKPPAPRGAVGAMAASLARRKAAREPRVVLTDPGGHPRTLEPDDPAATPLLEAAERLISTAQRHSEPG*
Ga0068857_1008165793	3300005577	Corn Rhizosphere	MPRLPRKPTAPRPRGAVGAMAASLARRKAAREPRVVLTDPGGHPRTLEPDDPATEPLLDAAERLLTAVQDRSE
Ga0070702_1001556321	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	PAPRGAVGAVAASLARRKAAREPRVVLTDPGGHPRTLEPDDPAATPLLEAAERLISTAQRHSETG*
Ga0068870_103382631	3300005840	Miscanthus Rhizosphere	MPRKPSAPRPRGAVGAMAASLARRKAAREPRVVLTDPGGHPRTLEPEDPAAEALLDAAERLLNAVHGRSEP*
Ga0081455_106435302	3300005937	Tabebuia Heterophylla Rhizosphere	MPRLPRKSSAPRPRGAVGAVAAGLARRKAAREPRVVVTDPGGHPRTLELDDPAAAALLDAAERLISASQRRSRV*
Ga0081538_1000407510	3300005981	Tabebuia Heterophylla Rhizosphere	MPRIPRKPTAPRPRGAVGAVAAGLARRKAAREPRVVLTDRGGHPRTLAADDPAAAPLLEAAERLISAVQRGSAP*
Ga0081538_100384534	3300005981	Tabebuia Heterophylla Rhizosphere	MPRLPRKSSAPRPRGAVGAVAAGLARRKAAREPRVVLTDPGGHPRTLERDDPVAEALLEAAERLISASQRRSRV*
Ga0081538_100949604	3300005981	Tabebuia Heterophylla Rhizosphere	MPRLPRKPTAPRPRGAVGAMAAGLARRKAARDPRVVVTDRGGHPRTLAADGPPAAPLMEAAER
Ga0081538_101097753	3300005981	Tabebuia Heterophylla Rhizosphere	MPRIPRKPTAPRPRGAVGAVAAGLARRKAAREPRVVLTDRGGHPRTLAPDDPAAAPLLEAAERLISAVQRRSGA*
Ga0081538_101766662	3300005981	Tabebuia Heterophylla Rhizosphere	MPRIPRKPTAPRPRGAVGAVAASLARRKAAREPRVTLTDAGGQPRALEASDPAHAPLLDAAERLILASQRGSEV*
Ga0081538_102295802	3300005981	Tabebuia Heterophylla Rhizosphere	MPRRPRKPTAPRPRGAVGAMAESLARRKAAREPRVVLTDPGGHPRTLEPDDPAAEPLLDAAERLLTAVQGRPDA*
Ga0081539_1000085535	3300005985	Tabebuia Heterophylla Rhizosphere	MPRQPRKPKPPAPRGAVGAMAASLARRKAAREPRVVLTEPGGHPRALDADDPAAGPLLEAADRLISAAQRRSGA*
Ga0066652_1003080921	3300006046	Soil	MPRSPRKAKPPAPRGAVGAMAASLARRKAAREPRVVLTDRGGHPRTLEPSDPAAEPLLEAAERLISAAQRGSGA*
Ga0082029_11626272	3300006169	Termite Nest	MPRVPRKPTRFRPRGAVGAMAASLARRKAAREPRVVLTDEGGQPRTLSHSDPAAEPLLDAAERLISAAQRGYEV*
Ga0075428_1004499292	3300006844	Populus Rhizosphere	MPRLPRKPSAPRPRGAVGAMAASLARRKAAREPRVVLTDPGGHPRTLEPTDPAAEPLLDAAERLLTAVQGRSEA*
Ga0075428_1020465522	3300006844	Populus Rhizosphere	MPRLPRKPTAPRPRGAVGAVAAGLARRKAAREPRVVLTDRGGHPRTLAPDDPASEPLLQAAERLISAAQRRSRR*
Ga0075428_1027281332	3300006844	Populus Rhizosphere	MPRLPRKPSAPRPRGAVGAVAAGLARRKAAREPRVVLTDPGGHPRTLDRDDPVAEAVLEAAERLISAAHRRSRT*
Ga0075421_1023177402	3300006845	Populus Rhizosphere	PTSKGGRARMPRLPRKPTAPRPRGAVGAMAASLARRKAAREPRVVLTDPGGHPRTLDPTDPAAEPLLDAAERLLTAVEGRSDA*
Ga0075430_1007148441	3300006846	Populus Rhizosphere	MPRLPRKSTAPRPRGAVGAVAAGLARRKAAREPRVVLTDPGGHPRTLDRDDPVAEAVLEAAERLISAAHRR
Ga0075430_1012472761	3300006846	Populus Rhizosphere	MPRLPRKPTAPRPRGAVGAVAAGLARRKAAREPRVVVTDRGGNARTLDRDDPVAQAVLEAAERL
Ga0075425_1009139582	3300006854	Populus Rhizosphere	MPRLPKKPTAPRPRGAVGAMAASLARRKASREPRVVVTEPGGHPRTLDADDPAAGPLMEAAERLISAAQRRSGA*
Ga0068865_1022190322	3300006881	Miscanthus Rhizosphere	RKPKPPAPRGAVGAVAASLARRKAAREPRVVLTDPGGHPRTLEPSDPAAGPLLGAAERLILAAQRQSEPN*
Ga0075424_1011469652	3300006904	Populus Rhizosphere	MPRPPRKPKAIRPGRAVDAVAGSLARRKAAREPRVVLTDRGGHPRTLDADDPSAAPLLDAAERLISAAQRRSDA*
Ga0079216_109132712	3300006918	Agricultural Soil	MRRLPRKPTASRPRGAVGAVAAGLARRKAAREPRVVLTDRRGHPRTLAPDDPAAAPLLEAAERLISAVQSRSRR*
Ga0075419_102871323	3300006969	Populus Rhizosphere	PRKPSAPRPRGAVGAMAASLARRKAAREPRVVLTDPGGHPRTLEPTDPAAEPLLDAAERLLTAVQGRSEA*
Ga0111539_100887813	3300009094	Populus Rhizosphere	MPRLPRKPSAPRPRGAVGAMAASLARRKAAREPRVVITAPGGHPRTLEAGDPAAGPLLDAAERLISASQRRSDT*
Ga0111539_115207651	3300009094	Populus Rhizosphere	MPRLPRKPTAPRPRGAVGAVAAGLARRKAARGPRVVVTDRGGHPRTLAPDDPAAASLLEAAERLISVVQSRSRR*
Ga0105245_114036452	3300009098	Miscanthus Rhizosphere	MPRLPRKPSAPRPRGAVGAIGASIARRKAAREPRVVLTDPGGHPRTLELSDPAAEPLLDAAERLLAATERRSDP*
Ga0105245_125192171	3300009098	Miscanthus Rhizosphere	PPAPRGAVGAVAASLARRKAAREPRVVLTDPGGHPRTLEPDDPAATPLLEAAERLISTAQRHSEPG*
Ga0075418_128598241	3300009100	Populus Rhizosphere	MPRLPRKPTAPRPRGAVGAVAAGLARRKAAREPRVVLTDRGGNARTLDRDDPVAQAVLEAAERLISASQRRSGD*
Ga0075418_131072741	3300009100	Populus Rhizosphere	MARHPRKPKPPAPRGAVGAVAASLARRKAAREPRVVLTARGGHPRMLDPSDPASEPLIEAAERLLSAAQRGSGA*
Ga0114129_106783884	3300009147	Populus Rhizosphere	MPRLPRKPSAPRPRGAVGAMAASLARRKAAREPRVVLTDPGGHPRTLEPTDPAAEPLLDAAERLLTAG
Ga0111538_118043602	3300009156	Populus Rhizosphere	MPRLPRKPPGPRPRGAVGAVDAGVASRTAARETRVVLTDRGGHVRTLTPDDPAAGPLLEAAERLISTAQRRSRR*
Ga0111538_118219272	3300009156	Populus Rhizosphere	MARHPRKPKPPAPRGAVGAVAASLARRKAAREPRVVLTARGGHPRTLDPSDPASEPLIEAAERLLSAALRGSGA*
Ga0105237_118942672	3300009545	Corn Rhizosphere	KPKPPAPRGAVGAVAASLARRKAAREPRVVLTDPGGHPRTLEPDDPAATPLLEAAERLISTAQRHSETG*
Ga0126309_103432991	3300010039	Serpentine Soil	MPRLPRKPSAPRPRGAVGNVAATLARRKAAREPRVIVRDRDGHPRALAPEDSVAAALLEAAERLLCATPEN*
Ga0126308_102934463	3300010040	Serpentine Soil	PRPRGAVGAMAAGIARRRAAREPRAVLRDGTGHARVLEGGDPAAAPLLKAAERLVSAAQRGSQA*
Ga0126312_111013191	3300010041	Serpentine Soil	MPRRPRKATAPRPRGAVGAVTAGLARRKAAREPRVVLTDRGGHPRTLASDDPAAAPLLEAAERLISAAQRRSRS*
Ga0126306_100882404	3300010166	Serpentine Soil	VIPKRKPAAPRPRGAVGNVAASLARRKAAREPRVVLTDPGGHPRTLHPSDPVAERVLDAAERLVLASQRGSGV*
Ga0134125_108901241	3300010371	Terrestrial Soil	MARKAKPPAPRGAVGAVAASLARRKAAREPRVVLTDRGGHPRTLEPSDPATEPLLEAAERLISAAQRGSGA*
Ga0134124_113854281	3300010397	Terrestrial Soil	RGAVGAVAASLARRKAAREPRVVLTDPGGHPRTLEPDDPAATPLLEAAERLISTAQRHSEPG*
Ga0134127_110177601	3300010399	Terrestrial Soil	ATTSASYSPTSAGESVRMPRLPRKPSAPRPRGAVGAIGASIARRKAAREPRVVLTDPGGHPRTLEPEDPAAEALLDAAERLLNAVHGRSEP*
Ga0134121_118688582	3300010401	Terrestrial Soil	MSRKPKPPAPRGAVGAMAASLARRKAAREPRVVLTDPGGHPRTLEPDDPAATPLLEAAERLISTAQRHSETG*
Ga0134123_111907804	3300010403	Terrestrial Soil	MPRLPRKPTAPRPRGAVGAMAASLARRKAAREPRVVLTDPGGHPRTLEPDDPATEPLLDAAERLLTAV
Ga0136613_100180346	3300012681	Polar Desert Sand	MPRLPRRPSAPRPRGAVGGVAATLARHKAAREPRVVVRDRGGNARVLPASDPLAGTLLAAAERLLFAAQRRSDG*
Ga0169967_10561333	3300013011	Rock	AGPFAAVAAGLARRKAAREPRVVLTSRNGARRTLAPGDPAAQPLLEAAERLVSAAQRGSADFAPPRDDG*
Ga0157371_103856804	3300013102	Corn Rhizosphere	MPRKPKPPAPRGAVGAMAASLARRKAAREPRVVLTDPGGHPRTLEPDDPAATPLLEAAERLISTAQRHSETG*
Ga0157369_126897472	3300013105	Corn Rhizosphere	MARKPKPPAPRGAVGAVAASLARRKAAREPRVVLTDPGGHPRTLEPSDPAAGPLLGAAERLILAAQRQSEPN*
Ga0163162_105084012	3300013306	Switchgrass Rhizosphere	MPRKARPPAPRGAVGAVAASLARRKAAREPRVVLTDPGGHPRTLEPDDPAATPLLEAAERLISTAQRHSETG*
Ga0075313_12151712	3300014267	Natural And Restored Wetlands	SAPRPRGAVGAVAAGLARRKAAREPRVVVTDPGGHPRTLEPDDPAAAPLLEAAERLISATQRRSRV*
Ga0182001_105258062	3300014488	Soil	VIPKRKPNAPRPRGAVGNVAASIARRRAAREPRVVLADNAGQLRTLDPSDPVAERLQEAAERLVSAAQ
Ga0132258_133863314	3300015371	Arabidopsis Rhizosphere	MPRLPRKPSAPRPRGAVGAMAASLARRKAAREPRVVLTDPGGHPRTLDPDDPAAGPLLDAAERLISASQR
Ga0132255_1015508622	3300015374	Arabidopsis Rhizosphere	MPRKPKPPAPRGAVGAVAASLVRRKAAREPRVVLTDPGGHPRTLEPDDPAATPLLEAAERLISTAQRHSEPG*
Ga0163161_113012991	3300017792	Switchgrass Rhizosphere	TGGRGLMPRKPKPPAPRGAVGAVAASLARRKAAREPRVVLTDPGGHPRTLEPDDPAATPLLEAAERLISTAQRHSETG
Ga0190266_112188671	3300017965	Soil	MPRLPRKPSAPRPRGAVGAMAASLARRKAAREPRVVLTDPGGHPRTLDPADPAAEPLLDAAERLLTAVQGRSDA
Ga0184624_100591023	3300018073	Groundwater Sediment	MPRLPRKPSAPRPRGALGARAASLARRKAAREPRVVLTDPGGHPRTLEPTDPAAEPLLDAAERLLTAVQGRPDP
Ga0190265_100723902	3300018422	Soil	MPRLPKKPSAPRPRGAVGAVAAGLARRKAAREPRVVLTDRGGHPRTLELDDPSMEPLLDAAERLISASQRRSRS
Ga0190265_101227515	3300018422	Soil	MPRLPRKPSAPRPRGAVGAVAAGLARRKAAREPRVVVTDPGGHPRTLERDDPAAQALLDAAERLISASQRRSRV
Ga0190265_101313684	3300018422	Soil	MPRIPRKPTAPRPRGAVGAMAASFARRKAAREPRVVLTDRGGQPRTLGADDPAAEPLLDAAERLISAAHRGSQA
Ga0190265_101406783	3300018422	Soil	MPRIPRKPTAPRPRGAVGAMAASFARRKAAREPRVVLTDRGGQPRTLDADDPAAEPLLDAAERLISAAHRGSRA
Ga0190265_101446853	3300018422	Soil	MPRIPRKPTAPRPRGAVGAMAASFARRKAAREPRVVLTDRGGQPRTLDPDDPATEPLLDAAERLLSAAQRGSRS
Ga0190265_101486984	3300018422	Soil	MPRLPRKPTAPRPRGAVGAVAASLARRKAAREPRVTLTDDGGQPRALESSDPAFGPLLDAAERLISASQRGSEV
Ga0190265_101945703	3300018422	Soil	VIPKRKPNAPRPRGAVGNVAASIARRKAAREPRVVLTDRGGHPRTLDASDPVAERVLDAAERLVSAVQRGSGT
Ga0190265_103579102	3300018422	Soil	MPRLPRKPAAPRPRGTVGAVAASFARRKAARKPRVVLTDRGGQPRTLPSSDPAAERLLGAAERLISAAGRGSGA
Ga0190265_106033123	3300018422	Soil	MPRLPRKPTAPRPRGAMGAVAASLARRRAAREPRVVLTDATGQQRALEPSDPLAEPLLDAAGRLISAAQSRSEV
Ga0190265_106508392	3300018422	Soil	MPRMPRRPAAPRPRGAVGAVAASLARRKAAREPRVVLTEHGGRPRTLPASDPASGPLLDAAGRLISAAQSGSEG
Ga0190265_110290363	3300018422	Soil	MPRLPKKPTAPRPRGAVGAVAAGLARRKAAREPRVVLTDPGGHPRTLDRDDPVAEAVLEAAERLISAQQRQTSA
Ga0190265_113245612	3300018422	Soil	MPRLPRKPTAPRPRGAVGAMAASLARRKAAREPRVALTDDGGQPRAVGSSDPAFAPLLDAAERLISASQRGSDV
Ga0190265_115119572	3300018422	Soil	MPRLPRKPSAPRPRGAVGAVAAGLARRKAAREPRVVLTDPGGHPRNLEPDDPAAEPLLQAAERLISASQRRSRVRNEPPKPRKLRE
Ga0190265_117654111	3300018422	Soil	MPRLPRRSAAPRPRGTVGAVAASFARRKAARKPRVVLTDRGGQPRTLHASDPATEPLLQAAERLISAAGRGSGA
Ga0190265_120046861	3300018422	Soil	MRLPRKPAAPRPRGAIGAVVASLARRKAAREPRVVLTERGGRPLALDASDPAARPLLDAAERLISAAQSGSER
Ga0190272_100796443	3300018429	Soil	MPRIPRKPTAPRPRGAVGAMAASLARRKAAREPRVVLTDRGGQPRTLDADDPAAEPLLDAAERLISAAHRGSRA
Ga0190272_109548591	3300018429	Soil	RPRGAVGAVAAGLARRKAAREPRVVLTDPGGHPRTLEPGDPSAEPLLQAAERLISASHGRSRVRNEPSKARKLRE
Ga0190275_102702273	3300018432	Soil	MPRLPRRPSAPRPRGAVGGVAATLARRKAAREPRVVVRDRGGNVRVLAPDDPLAATLHTAAERLIFAAQSRSDR
Ga0190268_100587053	3300018466	Soil	MPRLPRKPSAPRPRGAVGAVAAGLARRKAAREPRVVLTDPGGHPRTLEPGDPSAEPLLQAAERLISASHGRSRVRNEPSKARKLRE
Ga0190268_101059693	3300018466	Soil	VIPKRKPNAPRPRGAVGNVAASIARRKAACEPRVVLTDRGGHPRTLDVSDPVAERVLDAAERLVSASQRGSDA
Ga0190268_112540882	3300018466	Soil	MPRLPRKSSAPRPRGAVGAVAAGLARRKAAREPRVVLTEPGGHPRALEDDDPAVEPLLEAAERLISAAQRRSRV
Ga0190268_115783082	3300018466	Soil	MPRLPRKPTAPRPRGAVGAMAASLARRKAAREPRVVLTDPGGHPRTLDATDPAAEPLLDAAERLLTAVQGRSEP
Ga0190270_103967342	3300018469	Soil	MPRLPRKSSAPRPRGAVGAVAAGLARRKAAREPRVVLTDPGGHPRTLERDDPAAAPLLDAAERLISASQRRSGV
Ga0190270_105445534	3300018469	Soil	MPRLPRKPSAPRPRGAVGAMAASLARRKAAREPRVVLTDPGGHPRTLDATDPAAEPLLDAAEHLLTAVQGRSDA
Ga0190270_105937102	3300018469	Soil	MPRLPRKPTAPRPRGAVGAVAAGLARRKAAREPRVVLTDRGGHPRTLAPDDPAAAPLLEAAERLIFAVQSRSRH
Ga0190270_115455631	3300018469	Soil	IPRKPTAPRPRGPVGAMAASLARRKAAREPRVVLTDKGGQPRTLDADDPAAEPLLDAAERLISATHRGSRT
Ga0190271_102099132	3300018481	Soil	MPRLPRKPTAPRPRGAVGAVAAGLARRKAAREPRVVLTDRGGHPRTLAPDDPGAAPLLEAAERLISAVQSRSRR
Ga0190264_100414084	3300019377	Soil	MPRIPRKPTAPRPRGAVGAMAASFARRKAAREPRVVLTDRGGQPRTLDADDAAAEPLLDAAERLISAAHRGSRA
Ga0190264_103083063	3300019377	Soil	VIPKRKPNAPRPRGAVGNVAASIARRKAAREPRVVLTDRGGHPRTLDASDPVAERVLDAAERLVSAVQRGSGA
Ga0190264_114263152	3300019377	Soil	MPRLPRKQSAPRPRGAVGAVAAGIARRKAAREPRVVLADRGGHPRTLDPDDPAAAALLDAAERLISTAQRRSRP
Ga0193741_10927942	3300019884	Soil	MPRLPRKPTAPRPRGAVGAVAAGLARRKAAREPRVVLTDRGGHPRTLAPDDPAAAPLLEAAERLISAVQSHSRR
Ga0196963_103336002	3300020215	Soil	MPRLPRKHSAPRPRGAVGAVAAGLARRRAAREPRVVLTEPGGYPRTLAPDDPAAGPLLEAAERLISAAQRRSRR
Ga0207690_101226092	3300025932	Corn Rhizosphere	MPRKPKPPAPRGAVGAVAASLARRKAAREPRVVLTDPGGHPRTLEPDDPAATPLLEAAERLISTAQRHSEPG
Ga0207706_103172393	3300025933	Corn Rhizosphere	MPRKPKPPAPRGAVGAMAASLARRKAAREPRVVLTDPGGHPRTLEPDDPAATPLLEAAERLISTAQRHSETG
Ga0207691_114702292	3300025940	Miscanthus Rhizosphere	LRSSRGLMPRKPKPPAPRGAVGAVAASLARRKAAREPRVVLTDPGGHPRTLEPDDPAATPLLEAAERLISTAQRHSEPG
Ga0207712_101678704	3300025961	Switchgrass Rhizosphere	MPRKPKPPAPRGAVGAMAASLARRKAAREPRVVLTDPGGHPRTLEPDDPAATPLLEAAERLISTAQRHSEPG
Ga0207668_102327033	3300025972	Switchgrass Rhizosphere	MPRKPKPPAPRGAVGAVAASLARRKAAREPRVVLTDPGGHPRTLEPDDPAATPLLEAAERLISTAQRHSETG
Ga0207641_116643811	3300026088	Switchgrass Rhizosphere	GLMPRKPKPPAPRGAVGAVAASLARRKAAREPRVVLTDPGGHPRTLEPDDPAATPLLEAAERLISTAQRHSETG
Ga0207683_103939391	3300026121	Miscanthus Rhizosphere	RARMPRLPRKPTAPRPRGAVGAMAASLARRKAAREPRVVLTDPGGHPRTLEPDDPATEPLLDAAERLLTAVQDRSEP
Ga0207698_113933821	3300026142	Corn Rhizosphere	KPPAPRGAVGAVAASLARRKAAREPRVVLTDPGGHPRTLEPDDPAATPLLEAAERLISTAQRHSEPG
Ga0256867_102471682	3300026535	Soil	MPRLPRKPTAPRPRGAVGAVAAGLARRKAAREPRVVLTDRGGHPRTLSADDPAAAPLLDAAERLISAAQRRSRA
Ga0207428_100642956	3300027907	Populus Rhizosphere	MPRLPRKPSAPRPRGAVGAMAASLARRKAAREPRVVLTDPGGHPRTLEPTDPAAEPLLDAAERLLTAVQGRSEA
Ga0207428_101178842	3300027907	Populus Rhizosphere	MPRLPRKPSAPRPRGAVGAMAASLARRKAAREPRVVITAPGGHPRTLEAGDPAAGPLLDAAERLISASQRRSDT
Ga0307319_100275562	3300028722	Soil	MPRLPRKPTAPRPRGAVGAMAASLARRKAAREPRVVLTEPGGHPRTLDSEDPAAGPLLDAAERLISAAQRRSGV
Ga0307318_103776581	3300028744	Soil	MPRLPRKPSAPRPRGAVGAMAASLARRKAAREPRVVLTEPGGHPRTLEPDDPAAAPLLDAAERLISAAQRRSGA
Ga0307503_102127712	3300028802	Soil	VPRIPRKPTAPRPRGPVGAMAASFARRKAAREPRVVLTDKGGQPRTLDAGDPAAEPLLDAAERLISAAHRGSRT
Ga0299914_100469735	3300031228	Soil	MPRLPRKPTAPRPRGAVGAVAAGLARRKAAREPRVVLTDRGGHPRTLSADDPAAAPLLDAAERLISASQRRSRA
Ga0299913_100418117	3300031229	Soil	VPRIPRKPTAPRPRGAVGAMAASFARRKAAREPRVVLTDRGGQPRTLDADDPATEPLLNAAERLLSAAQRGSRS
Ga0299913_104349924	3300031229	Soil	MPRIPRKPTAPRPRGAMGAVAASLARRKAAREPRVVLTEHGGRPRTLDAADPAAAPLLDAAERLISAAQSGSGG
Ga0299913_105821874	3300031229	Soil	MPRMPRRPTAPRPRGAVGAVAASLARRKAAREPRVVLTEHGGRPRTLPASDPASGPLLDAAGRL
Ga0307408_1015402221	3300031548	Rhizosphere	GRAPMPRIPRKPSAPRPRGAVGAMAASLARRKAAREPRVVLTDPGGHPRTLDPEDPAAEPLLDAAERLLTAVQDRSEA
Ga0307408_1022376341	3300031548	Rhizosphere	RPRGAVGNVAASIARRRAAREPRVVLADRAGQLHTLDPSDPVAERLQEAAERLVSAAQRRSGT
Ga0307405_100357974	3300031731	Rhizosphere	VTPKRKPNAPRPRGAVGNVAASIARRRAAREPRVVLADRAGQLHTLDPSDPVAERLQEAAERLVSAAQRRSGT
Ga0307413_101402653	3300031824	Rhizosphere	MPRLPRKPTAPRPRGAVGAMAASLARRKAAREPRVVLTDPGGHPRTLDPSDPAAEPLLDAAERLLTAVQGRPDA
Ga0307413_107426222	3300031824	Rhizosphere	MPRLPRKPSAPRPRGAVGAMAASLARRKAAREPRVVLTDPGGHPRTLEPEDPAAEALLDAAERLLTAVQERSEP
Ga0307406_105420182	3300031901	Rhizosphere	MPRIPRKPSAPRPRGAVGAMAASLARRKAAREPRVVLTDPGGHPRTLDPEDPAAEPLLDAAERLLTAVQDRSEA
Ga0307406_111597192	3300031901	Rhizosphere	MPRPPRKPKAIRPGRAVDAVAGSLARRKAAREPRVALTDRGGHPRALDPDDPSVTPLLDAAERLISAAQRRSDA
Ga0307406_115380642	3300031901	Rhizosphere	MPRLPRKPSAPRPRGAVGAMAASLARRRAAREPRVVLTDPGGHPRTLEPSDAAAAPLLDAAERLISAAQRGSDA
Ga0307407_107268212	3300031903	Rhizosphere	MPRLPRKPSAPRPRGAVGAMAASLARRKAAREPRVVLTDPGGHPRTLESEDPAAEALLDAAERLLTAVQGRSEP
Ga0307409_1007234922	3300031995	Rhizosphere	MPRLPRKPSAPRPRGAVGAMAASLARRKAAREPRVVLTDPGGHPRTLEPEDPAAEALLDAAERLLTAVQGRSEP
Ga0307416_1006197752	3300032002	Rhizosphere	VIPKRKPAAPRPRGAVGNVAASLARRKAAREPRVVLTDPGRHPRTLHPSDPVAERVLAAAERLVLASQRGSGV
Ga0307416_1007407354	3300032002	Rhizosphere	MPRRPRKATAPRPRGAVGAVTAGLARRKAAREPRVVLTDRGGHPRTLASDDPAAAPLLEAAERLISAAQRRSR
Ga0307416_1035307681	3300032002	Rhizosphere	MPRRTRKPTAPRPRGAVGAMAASLARRKAAREPRVVLTERGGHPRTLEPDDPAATALLDAAERLLLAVQRGSEP
Ga0307414_121181482	3300032004	Rhizosphere	PSAPRPRGAVGAMAASLARRKAAREPRVVLTDPGGHPRTLEPEDPAAEALLDAAERLLTAVQGRSEP
Ga0307411_103646653	3300032005	Rhizosphere	KPSAPRPRGAVGAMAASLARRKAAREPRVVLTDPGGHPRTLEPEDPAAEALLDAAERLLTAVQGRSEP
Ga0326721_103705702	3300032080	Soil	VIPKRKPTAPRPRGAVGNVAASIARRKAAREPRVVLTERGGHLRTLDPSDPAAEPLLDAAERLISAAQRGSGA
Ga0326721_111321062	3300032080	Soil	RKSSAPRPRGAVGAVAAGLARRKAAREPRVVLTDPGGHPRTLERDDPAAAPLLDAAERLISASQRRSRV
Ga0372946_0627472_196_420	3300034384	Soil	MPRIPRKPTAPRPRGAVQAVAASFARRKAAREPRVVLTDRGGQPRTLDAGDPAAEPLLEAAERLISAAQRGSRT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F059327

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences