Metagenome Family F059387

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F059387
Family Type	Metagenome
Number of Sequences	134
Average Sequence Length	70 residues
Representative Sequence	MTLESAAAAHLRLMVWCKACGRRSELDPAEQARWYGPETPVPEWRRRLVCSQCGSRNVDMVVTGTRR
Number of Associated Samples	74
Number of Associated Scaffolds	134

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	48.09 %
% of genes near scaffold ends (potentially truncated)	44.03 %
% of genes from short scaffolds (< 2000 bps)	88.06 %
Associated GOLD sequencing projects	66
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.55

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (66.418 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (38.806 % of family members)
Environment Ontology (ENVO)	Unclassified (47.015 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (70.896 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 18.95% β-sheet: 15.79% Coil/Unstructured: 65.26%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.55
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.55
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 134 Family Scaffolds
PF01068	DNA_ligase_A_M	5.97
PF00805	Pentapeptide	2.99
PF04120	Iron_permease	1.49
PF04828	GFA	1.49
PF04365	BrnT_toxin	0.75
PF13527	Acetyltransf_9	0.75
PF13730	HTH_36	0.75
PF13561	adh_short_C2	0.75
PF13432	TPR_16	0.75
PF05068	MtlR	0.75
PF06627	DUF1153	0.75
PF05406	WGR	0.75
PF14384	BrnA_antitoxin	0.75
PF13643	DUF4145	0.75
PF08327	AHSA1	0.75
PF00211	Guanylate_cyc	0.75
PF08240	ADH_N	0.75
PF13537	GATase_7	0.75
PF13365	Trypsin_2	0.75

COG ID	Name	Functional Category	% Frequency in 134 Family Scaffolds
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	5.97
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	5.97
COG1357	Uncharacterized conserved protein YjbI, contains pentapeptide repeats	Function unknown [S]	2.99
COG3791	Uncharacterized conserved protein	Function unknown [S]	1.49
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.75
COG2929	Ribonuclease BrnT, toxin component of the BrnT-BrnA toxin-antitoxin system	Defense mechanisms [V]	0.75
COG3722	DNA-binding transcriptional regulator, MltR family	Transcription [K]	0.75
COG3831	WGR domain, predicted DNA-binding domain in MolR	Transcription [K]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.42 %
All Organisms	root	All Organisms	33.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.42 %
cellular organisms	root	All Organisms → cellular organisms	33.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.42 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	32.84 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.42 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	19.40 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	2.24 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.42 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	10.45 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2.24 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.49 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.75 %
Stenosarchaea group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.42 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3.73 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	2.24 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.49 %
Methanomicrobia	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	0.75 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.42 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.24 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	2.24 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	1.49 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.75 %
Rhodanobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	0.75 %
Methanosarcinales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.42 %
unclassified Gemmatimonadales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales	2.24 %
Undibacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Undibacterium	1.49 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.75 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.75 %
Rudaea	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rudaea	0.75 %
unclassified Methanosarcinales	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → unclassified Methanosarcinales	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.42 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	2.24 %
unclassified Undibacterium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Undibacterium → unclassified Undibacterium	1.49 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	0.75 %
Methanosarcinales archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → unclassified Methanosarcinales → Methanosarcinales archaeon	0.75 %
Methylobacterium gossipiicola	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → Methylobacterium gossipiicola	0.75 %
Rudaea cellulosilytica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rudaea → Rudaea cellulosilytica	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.42 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	2.24 %
Undibacterium sp. KW1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Undibacterium → unclassified Undibacterium → Undibacterium sp. KW1	1.49 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	0.75 %
Methanosarcinales archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → unclassified Methanosarcinales → Methanosarcinales archaeon	0.75 %
Methylobacterium gossipiicola	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → Methylobacterium gossipiicola	0.75 %
Rudaea cellulosilytica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rudaea → Rudaea cellulosilytica	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_100110632	All Organisms → cellular organisms → Bacteria → Proteobacteria	2579	Open in IMG/M
3300005332\|Ga0066388_105762578	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	627	Open in IMG/M
3300005332\|Ga0066388_107153812	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	561	Open in IMG/M
3300005434\|Ga0070709_11029173	Not Available	656	Open in IMG/M
3300005436\|Ga0070713_100468666	All Organisms → cellular organisms → Bacteria	1185	Open in IMG/M
3300005437\|Ga0070710_10183120	All Organisms → cellular organisms → Bacteria → Proteobacteria	1313	Open in IMG/M
3300005439\|Ga0070711_100214420	Not Available	1493	Open in IMG/M
3300005764\|Ga0066903_103078125	Not Available	903	Open in IMG/M
3300005764\|Ga0066903_108296448	Not Available	531	Open in IMG/M
3300005921\|Ga0070766_10781378	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	650	Open in IMG/M
3300006163\|Ga0070715_10669534	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300006173\|Ga0070716_101693610	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300006755\|Ga0079222_10784690	All Organisms → cellular organisms → Bacteria	774	Open in IMG/M
3300009792\|Ga0126374_10755680	Not Available	738	Open in IMG/M
3300010043\|Ga0126380_10828593	Not Available	760	Open in IMG/M
3300010047\|Ga0126382_10772687	Not Available	815	Open in IMG/M
3300010048\|Ga0126373_10556942	Not Available	1195	Open in IMG/M
3300010048\|Ga0126373_10584032	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1168	Open in IMG/M
3300010048\|Ga0126373_10669775	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → unclassified Methanosarcinales → Methanosarcinales archaeon	1094	Open in IMG/M
3300010048\|Ga0126373_11616958	Not Available	713	Open in IMG/M
3300010359\|Ga0126376_12822504	Not Available	535	Open in IMG/M
3300010361\|Ga0126378_10053468	All Organisms → cellular organisms → Bacteria	3777	Open in IMG/M
3300010361\|Ga0126378_11438540	Not Available	781	Open in IMG/M
3300010361\|Ga0126378_13211310	Not Available	520	Open in IMG/M
3300010362\|Ga0126377_11013585	Not Available	897	Open in IMG/M
3300010366\|Ga0126379_11273862	Not Available	841	Open in IMG/M
3300010366\|Ga0126379_11865161	Not Available	705	Open in IMG/M
3300010366\|Ga0126379_13414814	Not Available	532	Open in IMG/M
3300010376\|Ga0126381_100203195	All Organisms → cellular organisms → Bacteria → Proteobacteria	2651	Open in IMG/M
3300010376\|Ga0126381_100381733	All Organisms → cellular organisms → Bacteria	1957	Open in IMG/M
3300010376\|Ga0126381_100421630	All Organisms → cellular organisms → Bacteria	1865	Open in IMG/M
3300010376\|Ga0126381_100786375	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Undibacterium → unclassified Undibacterium → Undibacterium sp. KW1	1366	Open in IMG/M
3300010376\|Ga0126381_101088628	Not Available	1154	Open in IMG/M
3300010376\|Ga0126381_101116246	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1139	Open in IMG/M
3300010376\|Ga0126381_101276646	Not Available	1061	Open in IMG/M
3300010376\|Ga0126381_101318152	Not Available	1043	Open in IMG/M
3300010376\|Ga0126381_101489375	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	978	Open in IMG/M
3300010376\|Ga0126381_101661706	Not Available	923	Open in IMG/M
3300010376\|Ga0126381_101804663	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	883	Open in IMG/M
3300010376\|Ga0126381_101829979	Not Available	876	Open in IMG/M
3300010376\|Ga0126381_101946660	Not Available	847	Open in IMG/M
3300010376\|Ga0126381_102782588	Not Available	698	Open in IMG/M
3300010376\|Ga0126381_103071263	Not Available	662	Open in IMG/M
3300010376\|Ga0126381_103083930	Not Available	660	Open in IMG/M
3300010376\|Ga0126381_103491372	Not Available	617	Open in IMG/M
3300010376\|Ga0126381_104378288	Not Available	546	Open in IMG/M
3300010398\|Ga0126383_10379231	Not Available	1444	Open in IMG/M
3300010398\|Ga0126383_10562854	Not Available	1207	Open in IMG/M
3300010398\|Ga0126383_11757908	Not Available	709	Open in IMG/M
3300010398\|Ga0126383_12416088	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → Methylobacterium gossipiicola	610	Open in IMG/M
3300012203\|Ga0137399_11683231	Not Available	523	Open in IMG/M
3300012948\|Ga0126375_10291821	All Organisms → cellular organisms → Bacteria → Proteobacteria	1127	Open in IMG/M
3300012960\|Ga0164301_11681066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	530	Open in IMG/M
3300012971\|Ga0126369_11223153	Not Available	841	Open in IMG/M
3300012971\|Ga0126369_12249718	Not Available	632	Open in IMG/M
3300016270\|Ga0182036_11787612	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	520	Open in IMG/M
3300016294\|Ga0182041_10068655	All Organisms → cellular organisms → Bacteria → Proteobacteria	2482	Open in IMG/M
3300016294\|Ga0182041_11880048	Not Available	556	Open in IMG/M
3300016319\|Ga0182033_10939458	Not Available	767	Open in IMG/M
3300016319\|Ga0182033_11832774	Not Available	551	Open in IMG/M
3300016341\|Ga0182035_11319942	Not Available	646	Open in IMG/M
3300016341\|Ga0182035_11878147	Not Available	543	Open in IMG/M
3300016357\|Ga0182032_10006999	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5842	Open in IMG/M
3300016357\|Ga0182032_11218098	Not Available	648	Open in IMG/M
3300016357\|Ga0182032_11463296	Not Available	592	Open in IMG/M
3300016371\|Ga0182034_10311447	Not Available	1266	Open in IMG/M
3300016371\|Ga0182034_10338147	Not Available	1219	Open in IMG/M
3300016371\|Ga0182034_10454870	Not Available	1060	Open in IMG/M
3300016387\|Ga0182040_10021961	All Organisms → cellular organisms → Bacteria → Proteobacteria	3564	Open in IMG/M
3300016387\|Ga0182040_10053001	Not Available	2535	Open in IMG/M
3300016422\|Ga0182039_10063146	Not Available	2582	Open in IMG/M
3300020580\|Ga0210403_10098398	Not Available	2370	Open in IMG/M
3300020583\|Ga0210401_11252348	Not Available	600	Open in IMG/M
3300020583\|Ga0210401_11453937	Not Available	543	Open in IMG/M
3300021168\|Ga0210406_10264915	All Organisms → cellular organisms → Bacteria	1406	Open in IMG/M
3300021168\|Ga0210406_10332649	All Organisms → cellular organisms → Bacteria	1228	Open in IMG/M
3300021168\|Ga0210406_10682777	Not Available	793	Open in IMG/M
3300021432\|Ga0210384_11014153	All Organisms → cellular organisms → Bacteria → Proteobacteria	732	Open in IMG/M
3300021479\|Ga0210410_11690844	Not Available	527	Open in IMG/M
3300021560\|Ga0126371_10416253	Not Available	1487	Open in IMG/M
3300021560\|Ga0126371_10712135	Not Available	1152	Open in IMG/M
3300021560\|Ga0126371_10755908	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Undibacterium → unclassified Undibacterium → Undibacterium sp. KW1	1119	Open in IMG/M
3300021560\|Ga0126371_10882532	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	1039	Open in IMG/M
3300021560\|Ga0126371_11188123	Not Available	900	Open in IMG/M
3300021560\|Ga0126371_11667956	Not Available	762	Open in IMG/M
3300021560\|Ga0126371_11934828	Not Available	708	Open in IMG/M
3300021560\|Ga0126371_12848195	Not Available	586	Open in IMG/M
3300021560\|Ga0126371_13609517	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	522	Open in IMG/M
3300025915\|Ga0207693_10152830	All Organisms → cellular organisms → Bacteria	1816	Open in IMG/M
3300025916\|Ga0207663_10206518	Not Available	1420	Open in IMG/M
3300025929\|Ga0207664_11254689	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	660	Open in IMG/M
3300025939\|Ga0207665_10255579	All Organisms → cellular organisms → Bacteria	1296	Open in IMG/M
3300028047\|Ga0209526_10248193	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rudaea → Rudaea cellulosilytica	1219	Open in IMG/M
3300031128\|Ga0170823_17660701	Not Available	581	Open in IMG/M
3300031545\|Ga0318541_10008173	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4581	Open in IMG/M
3300031545\|Ga0318541_10689536	Not Available	570	Open in IMG/M
3300031546\|Ga0318538_10341465	Not Available	808	Open in IMG/M
3300031546\|Ga0318538_10424104	Not Available	720	Open in IMG/M
3300031561\|Ga0318528_10130004	Not Available	1335	Open in IMG/M
3300031572\|Ga0318515_10222486	Not Available	1012	Open in IMG/M
3300031573\|Ga0310915_10038355	All Organisms → cellular organisms → Bacteria → Proteobacteria	3037	Open in IMG/M
3300031668\|Ga0318542_10653880	Not Available	549	Open in IMG/M
3300031679\|Ga0318561_10637203	Not Available	587	Open in IMG/M
3300031680\|Ga0318574_10406412	Not Available	796	Open in IMG/M
3300031744\|Ga0306918_10707543	Not Available	788	Open in IMG/M
3300031744\|Ga0306918_10991939	Not Available	653	Open in IMG/M
3300031747\|Ga0318502_10111531	All Organisms → cellular organisms → Bacteria	1527	Open in IMG/M
3300031777\|Ga0318543_10113245	Not Available	1174	Open in IMG/M
3300031805\|Ga0318497_10163138	Not Available	1224	Open in IMG/M
3300031833\|Ga0310917_10653900	Not Available	713	Open in IMG/M
3300031879\|Ga0306919_10054986	All Organisms → cellular organisms → Bacteria	2653	Open in IMG/M
3300031890\|Ga0306925_10240835	Not Available	1950	Open in IMG/M
3300031890\|Ga0306925_10289399	All Organisms → cellular organisms → Bacteria	1763	Open in IMG/M
3300031890\|Ga0306925_11364972	Not Available	701	Open in IMG/M
3300031897\|Ga0318520_10722841	Not Available	623	Open in IMG/M
3300031910\|Ga0306923_11189921	Not Available	815	Open in IMG/M
3300031912\|Ga0306921_10405433	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1591	Open in IMG/M
3300031941\|Ga0310912_10700940	Not Available	785	Open in IMG/M
3300031942\|Ga0310916_10202580	All Organisms → cellular organisms → Bacteria	1661	Open in IMG/M
3300031942\|Ga0310916_10365100	Not Available	1227	Open in IMG/M
3300031942\|Ga0310916_10996711	Not Available	699	Open in IMG/M
3300031945\|Ga0310913_10468020	Not Available	895	Open in IMG/M
3300031945\|Ga0310913_11321754	Not Available	500	Open in IMG/M
3300031947\|Ga0310909_11193628	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	615	Open in IMG/M
3300031954\|Ga0306926_10795188	Not Available	1141	Open in IMG/M
3300031981\|Ga0318531_10133375	Not Available	1107	Open in IMG/M
3300031981\|Ga0318531_10256737	Not Available	789	Open in IMG/M
3300032035\|Ga0310911_10281550	Not Available	955	Open in IMG/M
3300032044\|Ga0318558_10553666	Not Available	575	Open in IMG/M
3300032052\|Ga0318506_10359998	Not Available	645	Open in IMG/M
3300032076\|Ga0306924_10230859	All Organisms → cellular organisms → Bacteria → Proteobacteria	2125	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	87.31%
Loam	Environmental → Terrestrial → Soil → Loam	12.69%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	46.27%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	40.30%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.46%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.22%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.75%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	38.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	26.12%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	19.40%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.72%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.99%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.49%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.75%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.75%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1001106324	3300002245	Forest Soil	MTLGNAAAARIRLIIWCKACGHRSEPDPAEQARWYGADTPVLEWRARLVCSSCGSRDIDMVCTGERR*
Ga0066388_1057625781	3300005332	Tropical Forest Soil	RLMVWCKSCGYRAEPDPGEQASWYGPETPVPDWRARLVCSKCGSRAIDMVVTGSKR*
Ga0066388_1071538121	3300005332	Tropical Forest Soil	VLMVWCKACDHRSEPDPADQARWYGPETPVPQWRRRLVCSKCGSRDVDMVVTGTRRLSL*
Ga0070709_110291732	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MTLGNAAAAKVRLMVWCKACGYRSEPDPAQQARWYGPETPVPEWHRRLVCSQCSSRNVDMVVTGMRR*
Ga0070713_1004686663	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MAMNSYSGPPMTLGNAAAARVRLVVWCKACGHRSEPDSAEQARWYGAETPVLAWRAGSVCSACG
Ga0070710_101831203	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MNSYSGPPMTLGNAAAARVRLVVWSKACGHRSEPDSAEQARWYGAETPVLAWRAGLVCSACGSRDIDMVCTGERR*
Ga0070711_1002144201	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MTLESAAAAHLRLMVWCKAYRHQVNLDPAEQARWYGPETPVPEWRRRLVCSQCGSRNIDMVVTGTKR*
Ga0066903_1030781252	3300005764	Tropical Forest Soil	MTLESAAAAHLRLMVWCKACGRRSELDPAEQARWYGPETPVPEWRRRLVCSQCGSRNVDMVVTGTKR*
Ga0066903_1082964481	3300005764	Tropical Forest Soil	MRSEPDPPPMTLGNAAAAHARFTVWCKACGYRAEPDPGEQARWYRPETPVPDWRARLVCSQCGSRNLDMVVTGQRCDFLSRASLSDRL*
Ga0070766_107813781	3300005921	Soil	VTSSYRGPPMTLGNAAAARIRLIIWCKACGHRSEPDPAEQARWYGADTPVLEWRARLVCSSCGSRDIDMVCTGERR*
Ga0070715_106695342	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	LVVWCKACGHRSEPDSAEQARWYGAETPVLAWRAGLVCSACGSRDIDMVCTGERR*
Ga0070716_1016936101	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MTLGNAAAARIRLIIWCKACGHRSEPDPAEQARWYGADTPVLERRARLVCSSCGSRDIDMVCTGERR*
Ga0079222_107846902	3300006755	Agricultural Soil	KPYRGPPMTLESAAAAHLRLMVWCKACRHQMNLDPAEQARWNGPETPVPEWRRRLVCSQCGSRNVDMVVTGTKR*
Ga0126374_107556802	3300009792	Tropical Forest Soil	MRSERDRPPMTLGSAAAAHVRFMVWCKACGYRSEPDPGEQARWYGPETPVPDWRARLVCSQCGSRDVDMVVTGRRRSPLT*
Ga0126380_108285932	3300010043	Tropical Forest Soil	MKPYRGPPMTLESAAAGNRRLMAWCKACGRRSEPDPAEQARWYGPDTPVPEWRRRLVCSQCGSRNVEMAASGENLTLQPSPM*
Ga0126384_109883981	3300010046	Tropical Forest Soil	MTLGSAAAAHLQFIVWCKACGHRSEPDPAEQARWHGPETTVPDWGKRLVCGKCGSRNVSFIVSGTKRDPLA*
Ga0126382_107726871	3300010047	Tropical Forest Soil	MKPYRGPPMTLESAAAANLRLMVWCKACGRRSEPDPAEQARWYGPDTPVPEWRRRLVCSQCGSRNVEMVVTGTRR*
Ga0126373_105569422	3300010048	Tropical Forest Soil	MTLGSAAAAHVRFMVWCKACGYRSEPDPAEQARWYGPETPVPDWRARLVCSQCGSRNVDMVVTGQRRRPLT*
Ga0126373_105840323	3300010048	Tropical Forest Soil	MQPYRGPPMTLGSAAAAKVRLIVWCKACGHRSEPDPAEQARWYGPETTVLDWRGRLVCSRCGSRAV
Ga0126373_106697752	3300010048	Tropical Forest Soil	MTLGSAAAAHLQLMVWCKACGHRSEPDPAEQARWYGPETTVPAWGKRLVCSRCGSRDVGFLVAGNRHDPLA*
Ga0126373_116169582	3300010048	Tropical Forest Soil	HVRFMVWCKACGYRAEPDPAERARWYGPETPVPDWRARVVCSQCGSRNVDMVVTGQRRSPLT*
Ga0126373_127633781	3300010048	Tropical Forest Soil	MKPYRGPPMTLASAAAAHLQFNVWCKPCGHRSEPEPAEQARWYSPETTVPDWGKRLVCSRCGSRNVRFVVSGTGRDRLGA*
Ga0126376_128225041	3300010359	Tropical Forest Soil	MTLGSAAAAHVRFMVWCKASGYRSEPDPGEQARWYGPETPVPDWRARLVCSQCGSRNVDMVVTGQRR*
Ga0126378_100534682	3300010361	Tropical Forest Soil	MTLGSAAAAHLRLVVWYKACGYRSEPDPAEQARWYGRRRLVCSQCGSRNIDMVVTGTRR*
Ga0126378_114385401	3300010361	Tropical Forest Soil	MTLGSAAAAHLQFMVWCKACGHRSEPDPAEQARWYGPETTVPEWAGSCAEKCGNRDVGFVVSGSRRDPLY*
Ga0126378_132113101	3300010361	Tropical Forest Soil	MTLGSAAAAPFRFMVWCKACDHGSEPDPPDQARWYGPETPVPDWRARLVCSKCGSRDVDSVISGPHH
Ga0126377_110135852	3300010362	Tropical Forest Soil	MKPYRGPPMTLESAAAANLRLMVWCKACGRRSEPDPAEQARWYGPETPVPEWRRRLVCSQCGSRNVDMVVTGTKR*
Ga0126379_107047721	3300010366	Tropical Forest Soil	MKSNPGRPAARGSTAAAHLRLIVWCKACGHRSEPDLADQARWYGAETTDLDWRARLVCSKCGSRDVDSVISGPHHDPL
Ga0126379_112738621	3300010366	Tropical Forest Soil	MTRPIPNENPYRGPPMTLGSAAAAKLGLRVWCKACGYRSEPDPADQARWYGPETPVPERRRRLGCSKCVSRN
Ga0126379_118651611	3300010366	Tropical Forest Soil	MTLGSAAAAHVRFMVWCKACGYRSEPDPGEQARWYGPETPVPDWRARLVCSQCGSRDVDMVVTGRRRSPLT*
Ga0126379_134148141	3300010366	Tropical Forest Soil	MTLGTAAAAHVRFMVWCKACGYRAEPDPDEQARWYGPETSVPDWRARLVCSQCGSRDVDM
Ga0126381_1002031953	3300010376	Tropical Forest Soil	MRSEPDHPPMTLGSAAAAHVRFMVWCKACGYRSEPDPGEQARWYGPETPVPDWRARLVCSQCGSRDVDMVVTGRRRSPLT*
Ga0126381_1003817332	3300010376	Tropical Forest Soil	MTLGNAAAAHARFTVWCKACGYRAEPDPGEQARWYRPETPVPDWRARLVCSQCGSRNLDMVVTGQRCDFLSRASLSDRL*
Ga0126381_1004216303	3300010376	Tropical Forest Soil	MTLGTAAAAHRRLMVWCKSCGYRAEPDPGEQARWYGPETPVPDWRARLVCSKCGSRAIDMVVTGSKR*
Ga0126381_1007863751	3300010376	Tropical Forest Soil	MRSEPDHPPMTLGSAAAAHVRFMMWCKGCGYRSEPDPGEQARWYGPETPVPDWRARVVCSQCGSRDVDMVVTGARRSPLT*
Ga0126381_1010886281	3300010376	Tropical Forest Soil	VRFMVWCKACGYRSEPDPGERAGWCGPETPVPDWRARLVCSGCGSRNVDMVVTGRRRSPLT*
Ga0126381_1011162463	3300010376	Tropical Forest Soil	MTLESAAAAHLTLRVWCKACGHRSEPDPAEQARWYGPETTVPEWRRRLVCSQCGSRNIDMVVTGTERR*
Ga0126381_1012766461	3300010376	Tropical Forest Soil	MRSEPDRPPMTLGSAAAAHVRFMVWCKACGYRAEPDPAEQARWYGPETPVPDWRARLVCSHCGSRNVDMVVTGQRRRPLT*
Ga0126381_1013181523	3300010376	Tropical Forest Soil	MTLENAATAKLTLVVWCKACGHRSEPDPAEQARWYGPETPVPEWRRRLVCSQCGSRDVDMMVTGTKR*
Ga0126381_1014893752	3300010376	Tropical Forest Soil	MKPYRGPPMTLGSAAAVHLQFMVWCTACGHRSEPDPAEQARWYGPETTVPNWGKRLVCSKCGSRNVSFVVSGSRRDPLD*
Ga0126381_1016617061	3300010376	Tropical Forest Soil	MRSEPDCPPMTLGSAAAAHVRFMVWCKACGYCSEPDPAGQARRYGPETPVPDWRARLVCSQCGSRDVDMVVTGQRRSPLT*
Ga0126381_1018046632	3300010376	Tropical Forest Soil	MTLGSAAAAHVRFVVWCKACGYRSEPDPGEQARWYGPEMPVPDWRARLVCSQCGSRDVDMVVTGQRR*
Ga0126381_1018299791	3300010376	Tropical Forest Soil	MTLGSAAAAHVRFMVWCKACGYRSEPDPGEQARWYGPETPVPDWRARLVCSQCGSRDVDMVVTGQRRSPLT*
Ga0126381_1019466603	3300010376	Tropical Forest Soil	MMTPYRGPPMTLGSAAAAHVRFMVWCKACGYRSEPDPGEQARWYGPETPVPDWRARLVCSQCGSRNVDMVVTGQRRGPLT*
Ga0126381_1027825882	3300010376	Tropical Forest Soil	MRSERDRPPMTLGSAAAAHVRFMVWCKACGYRSEPDPGEQARWYGPETTVPDWRARLVCSQCGSRNVDMVVTGQRRSPLT*
Ga0126381_1030712631	3300010376	Tropical Forest Soil	VLARVAAADVDETYRGPPMTLGSAAAAKLRLMVWCKACGHRAEPDPAEQARWYSPETSVPEWRPKLVCSKCGSREIDFVV
Ga0126381_1030839302	3300010376	Tropical Forest Soil	AHVRFMVWCKACGYRSEPDPGEQARWYGPETPVPDWRARLVCSQCGSRNVDMVVTGQRR*
Ga0126381_1034913722	3300010376	Tropical Forest Soil	MTLESAAAAKLRLQVWCKACGYRSEPDPAEQAHWYGPEMPVPEWRRRLVCSQCGSRNVDMVVTGDQAM
Ga0126381_1043782882	3300010376	Tropical Forest Soil	AAAARVRFMVWCKACGYRSEPDPGEQARWYGPQTPVPDWRARLVCSQCGSRNVDMVVTGQRRRPLT*
Ga0126383_103792313	3300010398	Tropical Forest Soil	MRSEPDHPPMTLGSAAAAHVRFMVWCKACGYRAEPDPAEQARWYGPETPVPDWRARLVCSQCGSRNVDMVVTGQRRSPLT*
Ga0126383_105628543	3300010398	Tropical Forest Soil	MTLGNAAAARVRFMVWCKACGYRSEPDPGEQARWYGPETPVPDWRARLVCSQCGSRDVDMVVTGQRR*
Ga0126383_117579082	3300010398	Tropical Forest Soil	MTLGNAAAAHLQFMVWCKACGHRSEPDPAEQARWYGPATTVPEWAGSCAKKCGNRDVGFVVSGSRRDPLY*
Ga0126383_124160882	3300010398	Tropical Forest Soil	MKPYRGPPMTLESAAAAKLVLIVWCKACGHRSEPDPAEQARWYGPETPVPEWRRRLVCSQCGSRDVDMVVTG
Ga0137399_116832311	3300012203	Vadose Zone Soil	MTLESAAAAHLRLMVWCKACGRRSELDPAEQARWYGPETPVPEWRRRLVCSQCGSRNVDMVVTGTRR
Ga0126375_102918213	3300012948	Tropical Forest Soil	MKPYRGPPMTLESAAAAKLRLMVWCKACGRRSEPDPAEQARWYGPDTPVPEWRRRLVCSQCGSRNVEMVVTGTRR*
Ga0164301_116810661	3300012960	Soil	VKPYRGPPMTLGSAAAAKLWLAVWCKACGHRSGPDPAEQARWFRPETPVPEWRRLVCSQCGSRNVDTVVTGPRRRD
Ga0126369_112231532	3300012971	Tropical Forest Soil	MTLGSAAAAHVRFMVWCKACGYRSEPDPAEQARWYGPETPVPDWRARLVCSQCGSRNVDMVV
Ga0126369_122497181	3300012971	Tropical Forest Soil	LRAAKQGPISPAAVMRSEPDRPPMTLGSAAAAHVRFMVWCKACGYRAEPDPAEQARWYGPETPVPDWRARLVCSHCGSRNVDMVVTGQRRRPLT*
Ga0182036_117876121	3300016270	Soil	ESAPAAKLVLMVWCKACGHRSEPDPAEQARWYGPETPVPEWHRRLVRSQRGSRDVDMVVTGTRR
Ga0182041_100686553	3300016294	Soil	VKPYRGPPMTLESAAAAKLRLAVWCKACGHQSEPDPAEQARWYGPETPVPEWRRRLVCSQCGSRNVDMVVTGTGR
Ga0182041_118800481	3300016294	Soil	MTLESAAAAQLRLVVWCKACGRRGELDPAEQARWYGPETPVPEWRRRLVCSQCGSRNVDMVVTG
Ga0182033_109394581	3300016319	Soil	VKTKPGPPATLGSTAAAGARIVVWCKACGHRSEPDPAEQARWYGPETLVPEWRRRLVCSQCGSRNVDMVVTG
Ga0182033_118327742	3300016319	Soil	MTLESAPAAKLVLMVWCKACGHRSEPDPAEQARWYGPETPVPEWHRRLVRSQRGSRDVDMVV
Ga0182035_113199421	3300016341	Soil	RGPPMTLESAAAAKLVLVVWCKACGHRSEPDPAEQVLWYRPETPVPEWRRRLVCSQCGSRNVDMVVTGTERRSR
Ga0182035_118781472	3300016341	Soil	MTLESAPAAKLVLMVWCKACGHRSEPDPAEQARWYGPETPVPEWHRRLVRSQRGSRDVDMVVTGT
Ga0182032_100069995	3300016357	Soil	MMLESAATAHLRLLVWCNACRHQMNLDPAEQARWYGPETPVPEWRRRLVCSQCGSRNVDMVVTGERR
Ga0182032_112180981	3300016357	Soil	AKLVLMVWCKACVHRSEPAPAEQARWYGPETPVPEWRRRLVCSQCGSRDVDMIVTGTKR
Ga0182032_114632961	3300016357	Soil	MRSEPDPPPMTLGGSAAARVRFMVWCKACGYRSEPDPAEQARWYGPETPVPDWRARLVCSQCGSRNGDMVVTGQRRSPLT
Ga0182034_103114471	3300016371	Soil	LMVWCKACGHRSEPNPAEQARWYGPETPVPEWRRRLVCSQCGSRDVDMVVTGTERR
Ga0182034_103381474	3300016371	Soil	MKRYTDLPVTLESAAAAHLRLAIWCKACGHRSELDPGEQARWYGPETPVPEWRRRLVCSQFGSRDVDMVV
Ga0182034_104548701	3300016371	Soil	MTLQGAAAAKLRLAVWCKACGHRSEPEPAEQARWYGPETPVPEWRRRLVCSQCGSRNVDMVVTG
Ga0182040_100219612	3300016387	Soil	MKPYRGPPMTLGNAAAARVRLMVWCKACGHRSEPNPAEQARWYGPETPVPEWRRRLVCSQCGSRDVDMVVTRTERR
Ga0182040_100530015	3300016387	Soil	MTLESAATAHLRLVVWCKACGRRGELDPAEQARWYGPETPVPEWRRRLVCSQCGSRNVDMVVTGERR
Ga0182039_100631465	3300016422	Soil	MLESAATAHLRLLVWCNACRHQMNLDPAEQARWYGPETPVPEWRRRLVCSQCDSRDVNMVVTGERR
Ga0210403_100983985	3300020580	Soil	MTLESAAAAHLRLVVWCKACKHQSELDPAEQARWYGPETPVLEWRGRLVCSQCGSRSVDVVVTGTRR
Ga0210401_112523481	3300020583	Soil	VRLIVWCKECGRRVELDPAEQAQGYGGEMSVPDWHKRLVCGDCGSHSVDMVVTGTER
Ga0210401_114539371	3300020583	Soil	ALQSAAAAKLRLFVWCKACGRRGELDPAEQGRWYGPETPVPEWRRRLVCSQCGSRNVDMVVTGTRR
Ga0210406_102649152	3300021168	Soil	MTLGNAAAARIRLIIWCKACGHRSEPDPAEQARWYGADTPVLEWRARLVCSSCGSRDIDMVCTGERR
Ga0210406_103326494	3300021168	Soil	MKLYRCPPMTLESAAAAHLRLVVWCKACGYRGEPDLAEQARWYGPETTVPERRRRLVCSKCGSREVDMVVNG
Ga0210406_106827772	3300021168	Soil	PLAAQLRLTVWCKACGHRSELDPAEQARWYGAETPVPEWRRRLVCSQCGSRNVDDMVGGRDEAVRLR
Ga0210384_110141532	3300021432	Soil	MTLESAAAVHLRLVVWCKGCGHRSELDPGEQARWYGPEPPVPEWRRRLVCSQCGSRNVNMVVTGTKR
Ga0210410_116908442	3300021479	Soil	GPPMTLGNAAAARIRLIIWCKACGHRSEPDPAEQARWYGADTPVLEWRARLVCSSCGSRDIDMVCTGERR
Ga0126371_104162533	3300021560	Tropical Forest Soil	MKPYTGPPMTLGSAAAAKLVLIVWCKSCGHRSEPDPADQARWYGPETPVPEWRRRLVCSQCGSRDVDM
Ga0126371_107121351	3300021560	Tropical Forest Soil	MTLGTAAAAHVRFMVWCKGCGYRAEPDPGEQARWYGPETPVPDWRARLVCSQCGSRDVDMVVTGRRRSPLT
Ga0126371_107559083	3300021560	Tropical Forest Soil	AAVMRSEPDPPPMTLGSAAAAHVRFMVWCKACGYRAEPDPAEQARWYGPETPVPDWRARLVCSQCGSRDVDMVVTGARRSPLT
Ga0126371_108825322	3300021560	Tropical Forest Soil	MRSEPGPPMTLGSAAAARVRFMVWCKACGYRSEPDPGEQARWYGPETPVPDWRARLMCSQCGSRNVDMVVTGQRRSPLA
Ga0126371_111881231	3300021560	Tropical Forest Soil	MTLGNAAAAHVRFMVWCKACGYRAEPDPAEQARWYGPETPAPDWRARLVCSQCGSRDVDMVVTGTPR
Ga0126371_116679562	3300021560	Tropical Forest Soil	MTLGNAAAAHLQFMVWCKACGHRSEPDPAEQARWYGPETTVPEWAGSCAKKCGNRDVGFVVSGSRRDPLY
Ga0126371_119348281	3300021560	Tropical Forest Soil	MKPYTGPPMTLESAAAAHLRLMVWCKVCGRRSEPDPAEQARWYGPETPVPEWRRRLVRSQCGSRNVDILVTGTKR
Ga0126371_128481952	3300021560	Tropical Forest Soil	MRSEPDRPPMTLGSAAAAQVRFMVWCKACGYRSEPDPGEQARWYGPETPVPDWRARLVCSQCGSRNVDMVVTGQRRSPLT
Ga0126371_136095172	3300021560	Tropical Forest Soil	MAMNSYSGPPMTLGNAAAAHIRLLVWCKACGRRSEPDPAEQARWYGAETPVLAWRARLVCSACGSRDIDIVCTGERR
Ga0207693_101528303	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	VTSSYRGPPMTLGNAAAARIRLIIWCKACGHRSEPDPAEQARWYGADTPVLEWRARLVCSSCGSRDIDMVCTGERR
Ga0207663_102065183	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MTLESAAAAHLRLMVWCKAYRHQVNLDPAEQARWYGPETPVPEWRRRLVCSQCGSRNIDMVVTGTKR
Ga0207664_112546891	3300025929	Agricultural Soil	MKLYRCPPMTLESAAAAHLRLVVWCKACGYRGEPDLAEQARWYGPETTVPERRRRLVCSKCGSRE
Ga0207665_102555793	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MTLGNAAAARIRLIIWCKACGHRSEPDPAEQARWYGADTPVLERRARLVCSSCGSRDIDMVCTGERR
Ga0209526_102481933	3300028047	Forest Soil	MTLESVAAAKLRLMVWCKACGHQSEPDAAEQARWYRPEMPVPEWRRRLVCSQCGSRSVDMVVTGTKR
Ga0170823_176607011	3300031128	Forest Soil	MTLGSASAAKLCLMVWCKACGHRSEPDPAEQARWYGPETPVPEWRRRLVCSQCGSRDVDMVVT
Ga0318541_100081735	3300031545	Soil	MMLESAATAHLRLLVWCNACRHQMNLDPAEQARWYGPETPVPEWRRRLVCSQCDSRDVNMVVTGERR
Ga0318541_106895362	3300031545	Soil	MTLESAAAAQLRLVVWCKACGRRGELDPAEQARWYGPETPVPEWRRRLVCSQCGSRNVDMVVTGTRR
Ga0318538_103414652	3300031546	Soil	MTLESAAAAKLVLVVWCKSCGHRSEPDPAEQARWYGPQTPIPDWRRRLVCSQCGSRDVDMVVTGTQR
Ga0318538_104241041	3300031546	Soil	MKPYRGPPMTLGNAAAARVRLMVWCKACGHRSEPNPAEQARWYGPETPVPEWRRRLVCSQCGSRDVDMVVT
Ga0318528_101300042	3300031561	Soil	MMLESAATVHLRLLVWCNACRHQMNLDPAEQARWYGPETPVPEWRRRLVCSQCDSSDVNMVVTGERR
Ga0318515_102224862	3300031572	Soil	MTLGNAAAAHVRFFVWCKACGHRSEPDPAEQARWYGAETPARGSRDIDMVCTGEKRSPGAWQNLNV
Ga0310915_100383553	3300031573	Soil	MKPYRGPPMTLGNAAAARVRLMVWCKACGHRSEPNPAEQARWYGPETPVPEWRRRLVCSQCGSRDVDMVVTGTERR
Ga0318542_106538801	3300031668	Soil	PYRGPSMTLESAAAAKLVLVVWCKSCGHRSEPDPAEQARWYGPQTPVPDWRRRLVCSQCGSRDVDMVVTGTQR
Ga0318561_106372031	3300031679	Soil	MKPYRGPPMTLESAAAAKLVLVVWCKSCGHRSEPDPAEQARWYGPQTPVPDWRRRLVCSQCGSRDVDMVVTGTQR
Ga0318574_104064123	3300031680	Soil	TLGNAAAARVRLMVWCKACGHRSEPNPAEQARWYGPETPVPEWRRRLVCSQCGSRDVDMVVTGTERR
Ga0306918_107075432	3300031744	Soil	MTLESAAAAHLRLAVWCKACGRRGELDPAEQARWYGPETPVPEWRRRLVCSQCGSRDVDMVVTGTQR
Ga0306918_109919391	3300031744	Soil	MTLGNAAAAHARLMVWCKACGHRSEPDPAEQARWYGPETPVPEWHRRLVRSQRGSRDVDMVVTGTRR
Ga0318502_101115314	3300031747	Soil	MTLESAAAAHLRLVVWCKACGRRGELDPAEQALWYGPGTPVPEWRRRLVCSQCGSRDVDMVV
Ga0318543_101132451	3300031777	Soil	GPPMTLESAAAAHLRLVVWCKACGRRGELDPAEQARWYGPETPVPEWRRRLVCSQCGSRNVDMVVTGERR
Ga0318497_101631383	3300031805	Soil	MMLESAATAHLRLLVWCNACRHQMNLDPAEQARWYGPETPVPEWRRRLVCSQCGSRDVNIVVTGERR
Ga0310917_106539002	3300031833	Soil	VKPYRGPPMTLESAAAAKLRLAVWCKACGHQSEPDPAEQARWYGPETPVPEWRRRLVCSQCGSRN
Ga0306919_100549865	3300031879	Soil	VKTKPGPPATLGSTAAAGARIVVWCKACGHRSEPDPAEQARWYGPETLVPEWRRRLVCSQCGSRNVDMVVTGTRR
Ga0306925_102408354	3300031890	Soil	MKRYTDLPVTLESAAAAHLRLAIWCKACGHRSELDPGEQARWYGPETPVPEWRRRLVCSQFGSRDVDMVVTGTRQ
Ga0306925_102893994	3300031890	Soil	MTLESAAAAHLRLVVWCKACGRRGELDPAEQALWYGPGTPVPEWRRRLVCSQCGSRDVDMVVTGTSERET
Ga0306925_113649722	3300031890	Soil	MTLESAPAAHLRLVVWCKACGHRSEPDPAEQARWYGPETPVPKWRRRLVCSQCGSRDVDMVVIGTRR
Ga0318520_107228411	3300031897	Soil	MTLGSAAAAHVRLMVWCKACGHRSEPDPAEQARWFGPETTMPDWRRRLVCSKCGSRNVDFVVSGASAHFSKGVGASGPRI
Ga0306923_111899211	3300031910	Soil	MKRYRGPPMTLGNTAAPKLVLMVWCKGCGRRSELDPVEQARWSGPETPVPEWRRRLVCSQCGSHDVDMVTGT
Ga0306921_104054334	3300031912	Soil	MKRYTDLPVTLESAAAAHLRLAIWCKACGHRSELDPGEQARWYGPETPVPEWRRRLVCSQFGSRDVDMVVTG
Ga0310912_107009402	3300031941	Soil	MTLESAAAAKLRLAVWCKACGHQSEPDPAEQARWYGPETPVPEWRRRLVCSQCGSRNVDMVVTGTGR
Ga0310916_102025801	3300031942	Soil	RKTPLKPYRGPPMTLESAAAAQLRLVVWCKACGRRGELDPAEQARWYGPETPVPEWRRRLVCSQCGSRNVDMVVTGTRR
Ga0310916_103651003	3300031942	Soil	VKTKPGPPATLGSTAAAGARIVVWCKACGHRSEPDPAEQARWYGPETLVPEWRRRLVCSQCGSRNVDMVVT
Ga0310916_109967112	3300031942	Soil	VKPYRGPPMTLESAAAAKLRLAVWCKACGHQSEPDPAEQARWYGPETPVPEWRRRLVCSQCGSRNVDMVVTGNGA
Ga0310913_104680201	3300031945	Soil	MKRYRGPPMTLGNTAAPKLVLMVWCKGCGRRSELDPVEQARWSGPETPVPEWRRRLVCSQCGSH
Ga0310913_113217542	3300031945	Soil	MTLESAAAAKLRLAVWCKGCGRRSELDPAEQARWYGPVTPVPEWRRRLVCSQCGSRDVNMVVIGTKR
Ga0310909_111936282	3300031947	Soil	VKPYTGSPMTLESAPAAKLVLMVWCKACGHRSEPDPAEQARWYGPETPVPEWHRRLVRSQRGSRDVDMVVTGTRR
Ga0306926_107951882	3300031954	Soil	MKPYRGPPMTLGSAAAAKLVLLVWCKACGHRAEPDAAEQARWYGPETPVPEWRRRLVCSQWGSRDVDMVVTGTERRT
Ga0318531_101333752	3300031981	Soil	MMLESAATAHLRLLVWCNACRHQMNLDPAEQARWYGPETPVPEWRRRLVCSQCDSRDVDMVVTGERR
Ga0318531_102567371	3300031981	Soil	VKPYRGPPMTLESATAAKLRLAVWCKACGHQSEPDPAEQARWYGPETPVPEWRRRLVCSQCGSRNVDMVV
Ga0310911_102815501	3300032035	Soil	SAAAAQLRLVVWCKACGRRGELDPAEQARWYGPETPVPEWRRRLVCSQCGSRNVDMVVTGTRR
Ga0318558_105536662	3300032044	Soil	MKPYRGPPMTLGNAAAARVRLMVWCKACGHRSEPNPAEQARWYGPETPVPEWRRRLVCSQCGSRDVDMVVTGT
Ga0318506_103599982	3300032052	Soil	RGPPMTLESAAAAKLRLAVWCKACGRRGELDPAEQARWYGPETPVPEWRRRLVCSQCGSRNVDMVVTGERR
Ga0306924_102308591	3300032076	Soil	PMTLESAAAAKLVLVVWCKSCGHRSEPDPAEQARWYGPQTPVPDWRRRLVCSQCGSRDVDMVVTGTQR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F059387

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences